CsGy3G005630 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCATACATCCCTATGTCAAGCCTACATCAAGAGATAAAGGTACCCATGTCCTTTTTAACTTCCGTTATAAAGTACAAGCATGTTTCCATAGTGGTTATGATCTCATTTGTTGTTGAAGTTTAAGAGAAGATATTTAAGATTTTAATTATATTGTAAGTTTTTTCCATTGCATTCTTCGTCCTTTCTTGCACAAAACAAAAATGGATCATTATTTTTATTCTAATTTTTCATTACTGTGTCAACTGTCCAAACCTTAGATTAGTACATCAAAGTGAGAAGTAATGGAGGACTAAATCAAATGTGAGCTAGTGTAAGTTGCTAACTTTATTACAGGAGGTCGAAAATTGACCAAATATGATTTATAAATACTTATTTTGGTTTATCTACTTCCTTGAAAATAAATTGTACAAATTTGTTGATAAGAATTTGTTTAAAGGATTCTTTTTTTTTTTAATTTGTAAAATAGATTTCTAACATGGTGGTTGTGACATGCATCTTAAAAGTTTGTTTTGGCATTATACGAGGTACTTGGTACTTGCATTTATGTTTTATTGTCAATTTTTGTATCAGATATTTTCAATGAATGTCACTTTATCAAAATCTTACAAAGTGATGTTAAGATAGTGAAGGAGCTCCCCAAGGAATTGGAGTCTATTCCACATGCTCGTAAGCATTTCAGTTCATGGGTTGGCTTTGGTTACTATGAAGAGATTGCACGGTTATGGAGAGATTCTCAGGTATTTTAAATGTTTCAAAAACTACTATGTATGAGTTTGATGTTAAAACAAGGAACCTTGTTCTTTTAAATTTCTCCATTTGCTTGGTGTTGGTTACAATCCTTCGTTTGAATTCACAGTAATCCACCAGAGATATGACCATAAACTTCCATTTAATTGAAAGACTAATTTTCTCTAAAATTTTTTAGTCTATTGATCATTTCGAAGTTCTATCTAATGTTTCTATAGTCTTGGCAATTACAATGTCTAATTAAAATTTCAATTGCAGTCTCCACTCTTCAGACACATATTAGTAAGTTAAAATTCAAAGTATCTTCTTCTTATATCTTGAACTGTTTGGCTGAAAAGGCTACACTTGTTTTTTTTTTTTTTAATTTTATCTTTCTTTCATGATTGGTTGTGTAATGATTTCTTTGAATGATGTGTTGTTGTCTTATCAAGTTCATTTTTGTAGGTCATTTACGTTGCAAAATATGATTCTCGATTGATAATAATGACCCGCCCCTAGATATTCAAGGGCTCAGATGTTGTGCAATGTATGAAGCCCTTCATTTTGTTCCACCAATTGAGAACTTTGGAAAGGTTTGGATTGTTGCTAGTTTTAAAATATTTGTTAGCACATGTTGCACATGTTGTAGATGTTGGGGATTTAGTGAACTAATGTATGTTAAACCGTTTATAAATTATCATCAAAGTAACATCACAACCAAAAAGGATTCAAGATCCTTTCAAATGCTCATTTAGAAATATATTAGAAATTCATCTTACAGTGAGGTGATAATGTGCGTCAACTTAGGCTTCCTATGACGGTGACACCACAGAAGTTGGTCG ATGGCTTCCATACATCCCTATGTCAAGCCTACATCAAGAGATAAAGATATTTTCAATGAATGTCACTTTATCAAAATCTTACAAAGTGATGTTAAGATAGTGAAGGAGCTCCCCAAGGAATTGGAGTCTATTCCACATGCTCGTAAGCATTTCAGTTCATGGGTTGGCTTTGGTTACTATGAAGAGATTGCACGGTTATGGAGAGATTCTCAGGTCATTTACGTTGCAAAATATGATTCTCGATTGATAATAATGACCCGCCCCTAGATATTCAAGGGCTCAGATGTTGTGCAATGTATGAAGCCCTTCATTTTGTTCCACCAATTGAGAACTTTGGAAAGGTTTGGATTGTTGCTAGTTTTAAAATATTTGTTAGCACATGTTGCACATGTTGTAGATGTTGGGGATTTAGTGAACTAATGTATGTTAAACCGTTTATAAATTATCATCAAAGTAACATCACAACCAAAAAGGATTCAAGATCCTTTCAAATGCTCATTTAGAAATATATTAGAAATTCATCTTACAGTGAGGTGATAATGTGCGTCAACTTAGGCTTCCTATGACGGTGACACCACAGAAGTTGGTCG ATGGCTTCCATACATCCCTATGTCAAGCCTACATCAAGAGATAAAGATATTTTCAATGAATGTCACTTTATCAAAATCTTACAAAGTGATGTTAAGATAGTGAAGGAGCTCCCCAAGGAATTGGAGTCTATTCCACATGCTCGTAAGCATTTCAGTTCATGGGTTGGCTTTGGTTACTATGAAGAGATTGCACGGTTATGGAGAGATTCTCAGGTCATTTACGTTGCAAAATATGATTCTCGATTGATAATAATGACCCGCCCCTAG MASIHPYVKPTSRDKDIFNECHFIKILQSDVKIVKELPKELESIPHARKHFSSWVGFGYYEEIARLWRDSQVIYVAKYDSRLIIMTRP
BLAST of CsGy3G005630 vs. NCBI nr
Match: XP_004148653.2 (PREDICTED: uncharacterized protein At1g04910 [Cucumis sativus] >KGN48358.1 hypothetical protein Csa_6G483390 [Cucumis sativus]) HSP 1 Score: 127.9 bits (320), Expect = 1.7e-26 Identity = 62/72 (86.11%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of CsGy3G005630 vs. NCBI nr
Match: XP_008441049.1 (PREDICTED: uncharacterized protein At1g04910 [Cucumis melo]) HSP 1 Score: 125.9 bits (315), Expect = 6.6e-26 Identity = 61/72 (84.72%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of CsGy3G005630 vs. NCBI nr
Match: XP_023518552.1 (O-fucosyltransferase 38 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 123.6 bits (309), Expect = 3.3e-25 Identity = 58/72 (80.56%), Postives = 63/72 (87.50%), Query Frame = 0
BLAST of CsGy3G005630 vs. NCBI nr
Match: XP_022963253.1 (O-fucosyltransferase 38 isoform X1 [Cucurbita moschata]) HSP 1 Score: 121.7 bits (304), Expect = 1.2e-24 Identity = 57/72 (79.17%), Postives = 63/72 (87.50%), Query Frame = 0
BLAST of CsGy3G005630 vs. NCBI nr
Match: XP_022963254.1 (O-fucosyltransferase 38 isoform X2 [Cucurbita moschata]) HSP 1 Score: 121.7 bits (304), Expect = 1.2e-24 Identity = 57/72 (79.17%), Postives = 63/72 (87.50%), Query Frame = 0
BLAST of CsGy3G005630 vs. TAIR10
Match: AT5G64600.1 (O-fucosyltransferase family protein) HSP 1 Score: 94.4 bits (233), Expect = 3.8e-20 Identity = 42/67 (62.69%), Postives = 55/67 (82.09%), Query Frame = 0
BLAST of CsGy3G005630 vs. TAIR10
Match: AT1G22460.1 (O-fucosyltransferase family protein) HSP 1 Score: 72.4 bits (176), Expect = 1.6e-13 Identity = 33/73 (45.21%), Postives = 49/73 (67.12%), Query Frame = 0
BLAST of CsGy3G005630 vs. TAIR10
Match: AT5G01100.1 (O-fucosyltransferase family protein) HSP 1 Score: 52.4 bits (124), Expect = 1.7e-07 Identity = 31/69 (44.93%), Postives = 40/69 (57.97%), Query Frame = 0
BLAST of CsGy3G005630 vs. TAIR10
Match: AT5G35570.1 (O-fucosyltransferase family protein) HSP 1 Score: 49.3 bits (116), Expect = 1.4e-06 Identity = 29/69 (42.03%), Postives = 40/69 (57.97%), Query Frame = 0
BLAST of CsGy3G005630 vs. TAIR10
Match: AT3G02250.1 (O-fucosyltransferase family protein) HSP 1 Score: 44.3 bits (103), Expect = 4.6e-05 Identity = 27/76 (35.53%), Postives = 43/76 (56.58%), Query Frame = 0
BLAST of CsGy3G005630 vs. Swiss-Prot
Match: sp|F4KF16|OFT38_ARATH (O-fucosyltransferase 38 OS=Arabidopsis thaliana OX=3702 GN=OFUT38 PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 6.9e-19 Identity = 42/67 (62.69%), Postives = 55/67 (82.09%), Query Frame = 0
BLAST of CsGy3G005630 vs. Swiss-Prot
Match: sp|B7ZWR7|OFUT7_ARATH (O-fucosyltransferase 7 OS=Arabidopsis thaliana OX=3702 GN=OFUT7 PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 2.8e-12 Identity = 33/73 (45.21%), Postives = 49/73 (67.12%), Query Frame = 0
BLAST of CsGy3G005630 vs. Swiss-Prot
Match: sp|Q9LFC6|FRB1_ARATH (Protein FRIABLE 1 OS=Arabidopsis thaliana OX=3702 GN=FRB1 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 3.0e-06 Identity = 31/69 (44.93%), Postives = 40/69 (57.97%), Query Frame = 0
BLAST of CsGy3G005630 vs. Swiss-Prot
Match: sp|Q94BY4|OFT35_ARATH (O-fucosyltransferase 35 OS=Arabidopsis thaliana OX=3702 GN=OFUT35 PE=2 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 2.6e-05 Identity = 29/69 (42.03%), Postives = 40/69 (57.97%), Query Frame = 0
BLAST of CsGy3G005630 vs. Swiss-Prot
Match: sp|Q93ZR8|OFT21_ARATH (O-fucosyltransferase 21 OS=Arabidopsis thaliana OX=3702 GN=OFUT21 PE=2 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 8.2e-04 Identity = 27/76 (35.53%), Postives = 43/76 (56.58%), Query Frame = 0
BLAST of CsGy3G005630 vs. TrEMBL
Match: tr|A0A0A0KFN5|A0A0A0KFN5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483390 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.1e-26 Identity = 62/72 (86.11%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of CsGy3G005630 vs. TrEMBL
Match: tr|A0A1S3B2I8|A0A1S3B2I8_CUCME (uncharacterized protein At1g04910 OS=Cucumis melo OX=3656 GN=LOC103485276 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 4.3e-26 Identity = 61/72 (84.72%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of CsGy3G005630 vs. TrEMBL
Match: tr|A0A2K2ACA8|A0A2K2ACA8_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G059600v3 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.4e-21 Identity = 53/72 (73.61%), Postives = 59/72 (81.94%), Query Frame = 0
BLAST of CsGy3G005630 vs. TrEMBL
Match: tr|A0A068U8C4|A0A068U8C4_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00018776001 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.6e-20 Identity = 52/72 (72.22%), Postives = 58/72 (80.56%), Query Frame = 0
BLAST of CsGy3G005630 vs. TrEMBL
Match: tr|A0A2H3XP81|A0A2H3XP81_PHODC (uncharacterized protein At1g04910 OS=Phoenix dactylifera OX=42345 GN=LOC103704856 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 2.1e-20 Identity = 51/72 (70.83%), Postives = 58/72 (80.56%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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