CsGy3G005460 (gene) Cucumber (Gy14) v2

NameCsGy3G005460
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr3 : 4401651 .. 4403622 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGATTGGATGAACTGTGTGAAAGAAAAGAAGAGTTCAAGATTCAAGGTAAGTCAATGCCATTTGTTTTAAAAGATACATACGTACATTTAATGCTTTTGATGATTAATACATTTGTACGTGTTTGATGAAGAGGCAACTTCCACATGCATGTAGTCGTAAGGGTTAAGTTCGCTCGGGAGAATATATGGTATTGATTATTCTAAATTAAAAATATAATGATTTTGTTAAATTTAGTACTATATCTAACTACATTGCATTTTTTGAAGAAAAAAATTGTTCAGACCCATCATCGGGGACAAGGGTCGAACTATGGACTAGAGCACATAGGAAGAAAGATGGAACTCCCGTTAACTCGGAAGTTGCAGAAACATTGGTAAAGTTTCAAAATCTCTTTTATTCAATAAACATTTGTTGATTAGTTGTTGTTGGCTTTAGAAATGTATGAGTTAGGAGAAATACTTGATTTGTTTAGTTATGGAGTTCTACTACTGATATTTTTTTTAATGACTAAAACCATTTCTTGAAGTATATGTGTTACTTTATGATTTTTTTTTTTTTTGGAGGGGGAGGGGGTGTAGAAAAGGATGTTTAAAGATGTTTTCATTGGTTTTGTTGGCTTTAGAAATGTGTGAGTTAGGAAAAATCAAATACTTGACTTGTTGAGTTGTGGAGTTGTGGAGTTGTAGTAGATGTTCTTTGAATGATTAAAACCATTTGTTGAGTATGTGTTACTTTTATGATTTTTATTTTTTTTTTGGAGAGGGGAGGGGGTTGAAAAGGATGCTTAAAGATGTTTTCATTAGTTGTTGTTGGCTTTAGAAATGTATGAGTCGGGGGAATATCAAATACTTGACTTGTTGAGTTGTGAAGTTGTACTAGATCTTCTTTGAATGACTAAAACCATTTGTTGAGTATGTGTTGCTTTATGATATCTTTTTTCGGGGAAGGGGAGTTGTGGAAAAAACTAGTTGGTGTTGGCTTTAGAGAAATGAGTATTTACGCATTTATGCAATTTACGAGCACATCAAAGAGATTGACAATGAAGGGATAAACATTTCTTCAAACAATGTGGCAAACGATACAATAAGTAAAGTTCTTGATCCAAATCGGGATCATATTAGAGCATTTGGATTTGGAGTCACCTCATCGAATTTTTGTTTATTATCTAAAAAGTATGGCCAATATGTCAAACTCAAAGAAATGTGTGAGAAGATGGAGGTTGAAATGTCTCAAATAAAATCTTTTAATATCCCACCTTCTTAAATCACAAGTATGAAGTTTCGTAGCATACTTTAACATAGGTTTATACTCTTTATTTCTAATTGTTTAACTTGTATGCATTATTTTTCTATTTTCTAACTTTAGAGTAATGGAAGAGACCAACTTTCTAACGCTACAAATGATCAAATTTTTAACAATATTGCTACTAAACTGATTGGAACTTCACCTCTGGTAAGGTCTGTAATTGTTTATTCCTAATTGTTATAACTTACTCATTATGTTTAATATTGCATTTTATATTGCCTCGTTGGTATAAAGTATTAATAACAATAATACTCTTTGCAAGTGCACAATGCTAGATTGGGGTGGTACAGAAGTGGTGGTTGCTGAAGGTCGATGATCCTCAAATGATCCTAAAGTTACTGTTCACCATGTTCCTCTCGGTCCACATGTTGTTAGAGTTCGGGTGGAATTGCCAAAGAAGTCATATGCATTTTTATGGAGACCTAACTCAGAGATGATATACATTGAGGATGTTGTTGGAAGCACAGTAACATGACCTGTTGACAAAGTTATTTTAAGTATGTATATTCTTTAACTATTAACTTCTAGCTAGCTTTTTTCTACCAAAATCTGTGTATAAACATAATTACTCATTTAGTTTTTGTTCATAATTTTTTTGTAGGTTGATAAAAGAACAATTGTACAAACCCCAAAAATATCATTTCTAAGACACAACAATTAG

mRNA sequence

ATGCAAGATTGGATGAACTGTGTGAAAGAAAAGAAGAGTTCAAGATTCAAGTTGTTGTTGGCTTTAGAAATGGGGAGGGGGTGTAGAAAAGGATGTTTAAAGATGTTTTCATTGGTTTTGTTGGCTTTAGAAATGTTTGTTGTTGGCTTTAGAAATAGAAATGAGTATTTACGCATTTATGCAATTTACGAGCACATCAAAGAGATTGACAATGAAGGGATAAACATTTCTTCAAACAATGTGGCAAACGATACAATAAGTAAAGTTCTTGATCCAAATCGGGATCATATTAGAGCATTTGGATTTGGAGTCACCTCATCGAATTTTTGTTTATTATCTAAAAAGTATGGCCAATATGTCAAACTCAAAGAAATGTGTGAGAAGATGGAGGTTGATAAAAGAACAATTGTACAAACCCCAAAAATATCATTTCTAAGACACAACAATTAG

Coding sequence (CDS)

ATGCAAGATTGGATGAACTGTGTGAAAGAAAAGAAGAGTTCAAGATTCAAGTTGTTGTTGGCTTTAGAAATGGGGAGGGGGTGTAGAAAAGGATGTTTAAAGATGTTTTCATTGGTTTTGTTGGCTTTAGAAATGTTTGTTGTTGGCTTTAGAAATAGAAATGAGTATTTACGCATTTATGCAATTTACGAGCACATCAAAGAGATTGACAATGAAGGGATAAACATTTCTTCAAACAATGTGGCAAACGATACAATAAGTAAAGTTCTTGATCCAAATCGGGATCATATTAGAGCATTTGGATTTGGAGTCACCTCATCGAATTTTTGTTTATTATCTAAAAAGTATGGCCAATATGTCAAACTCAAAGAAATGTGTGAGAAGATGGAGGTTGATAAAAGAACAATTGTACAAACCCCAAAAATATCATTTCTAAGACACAACAATTAG

Protein sequence

MQDWMNCVKEKKSSRFKLLLALEMGRGCRKGCLKMFSLVLLALEMFVVGFRNRNEYLRIYAIYEHIKEIDNEGINISSNNVANDTISKVLDPNRDHIRAFGFGVTSSNFCLLSKKYGQYVKLKEMCEKMEVDKRTIVQTPKISFLRHNN
BLAST of CsGy3G005460 vs. NCBI nr
Match: KGN56299.1 (hypothetical protein Csa_3G113900 [Cucumis sativus])

HSP 1 Score: 80.1 bits (196), Expect = 7.0e-12
Identity = 52/125 (41.60%), Postives = 69/125 (55.20%), Query Frame = 0

Query: 1    MQDWMNCVKEKKSSRFKLLLALEMGRGCRKGCLKMFSLVLLALEMFVVGFRNRNEY-LRI 60
            M DWMN VKEKKS+ FK           +KGC    S+  +A+       ++ N    ++
Sbjct: 944  MHDWMNFVKEKKSAMFK-----------KKGCPDSSSVSRVAVWAKAHRKKDGNPVNSQV 1003

Query: 61   YAIYEHIKEIDNEGINISSNNVANDTISKVLDPNRDHIRAFGFGVTSSNFCLLSKKYGQY 120
                E I++IDNEGI  +SNNV N+ ISKVL  +R    A GFGVT   F LLS+  G Y
Sbjct: 1004 AEALERIEQIDNEGIKTTSNNVGNEAISKVLGSDRGDTGALGFGVTVKKFSLLSQLDGHY 1057

Query: 121  VKLKE 125
             +L+E
Sbjct: 1064 AELEE 1057

BLAST of CsGy3G005460 vs. NCBI nr
Match: XP_011650589.1 (PREDICTED: uncharacterized protein LOC101217008 isoform X1 [Cucumis sativus] >XP_011650590.1 PREDICTED: uncharacterized protein LOC101217008 isoform X1 [Cucumis sativus])

HSP 1 Score: 75.1 bits (183), Expect = 2.3e-10
Identity = 53/144 (36.81%), Postives = 74/144 (51.39%), Query Frame = 0

Query: 1    MQDWMNCVKEKKSS-------RFKLLLALEMGRGC------------RKGCLKMFSLVLL 60
            M DWMN VKEKKS+       +FK +   ++   C            +KGC    S+  +
Sbjct: 910  MHDWMNFVKEKKSAMFKAKSEKFKSMKKKQLPHTCSRKGYARLAEEMKKGCPDSSSVSRV 969

Query: 61   ALEMFVVGFRNRNEY-LRIYAIYEHIKEIDNEGINISSNNVANDTISKVLDPNRDHIRAF 120
            A+       ++ N    ++    E I++IDNEGI  +SNNV N+ ISKVL  +R    A 
Sbjct: 970  AVWAKAHRKKDGNPVNSQVAEALERIEQIDNEGIKTTSNNVGNEAISKVLGSDRGDTGAL 1029

Query: 121  GFGVTSSNFCLLSKKYGQYVKLKE 125
            GFGVT   F LLS+  G Y +L+E
Sbjct: 1030 GFGVTVKKFSLLSQLDGHYAELEE 1053

BLAST of CsGy3G005460 vs. NCBI nr
Match: XP_011650591.1 (PREDICTED: uncharacterized protein LOC101217008 isoform X2 [Cucumis sativus])

HSP 1 Score: 75.1 bits (183), Expect = 2.3e-10
Identity = 53/144 (36.81%), Postives = 74/144 (51.39%), Query Frame = 0

Query: 1    MQDWMNCVKEKKSS-------RFKLLLALEMGRGC------------RKGCLKMFSLVLL 60
            M DWMN VKEKKS+       +FK +   ++   C            +KGC    S+  +
Sbjct: 907  MHDWMNFVKEKKSAMFKAKSEKFKSMKKKQLPHTCSRKGYARLAEEMKKGCPDSSSVSRV 966

Query: 61   ALEMFVVGFRNRNEY-LRIYAIYEHIKEIDNEGINISSNNVANDTISKVLDPNRDHIRAF 120
            A+       ++ N    ++    E I++IDNEGI  +SNNV N+ ISKVL  +R    A 
Sbjct: 967  AVWAKAHRKKDGNPVNSQVAEALERIEQIDNEGIKTTSNNVGNEAISKVLGSDRGDTGAL 1026

Query: 121  GFGVTSSNFCLLSKKYGQYVKLKE 125
            GFGVT   F LLS+  G Y +L+E
Sbjct: 1027 GFGVTVKKFSLLSQLDGHYAELEE 1050

BLAST of CsGy3G005460 vs. NCBI nr
Match: XP_011650592.1 (PREDICTED: uncharacterized protein LOC101217008 isoform X3 [Cucumis sativus])

HSP 1 Score: 75.1 bits (183), Expect = 2.3e-10
Identity = 53/144 (36.81%), Postives = 74/144 (51.39%), Query Frame = 0

Query: 1    MQDWMNCVKEKKSS-------RFKLLLALEMGRGC------------RKGCLKMFSLVLL 60
            M DWMN VKEKKS+       +FK +   ++   C            +KGC    S+  +
Sbjct: 881  MHDWMNFVKEKKSAMFKAKSEKFKSMKKKQLPHTCSRKGYARLAEEMKKGCPDSSSVSRV 940

Query: 61   ALEMFVVGFRNRNEY-LRIYAIYEHIKEIDNEGINISSNNVANDTISKVLDPNRDHIRAF 120
            A+       ++ N    ++    E I++IDNEGI  +SNNV N+ ISKVL  +R    A 
Sbjct: 941  AVWAKAHRKKDGNPVNSQVAEALERIEQIDNEGIKTTSNNVGNEAISKVLGSDRGDTGAL 1000

Query: 121  GFGVTSSNFCLLSKKYGQYVKLKE 125
            GFGVT   F LLS+  G Y +L+E
Sbjct: 1001 GFGVTVKKFSLLSQLDGHYAELEE 1024

BLAST of CsGy3G005460 vs. NCBI nr
Match: XP_016901232.1 (PREDICTED: uncharacterized protein LOC103493280 isoform X1 [Cucumis melo] >XP_016901233.1 PREDICTED: uncharacterized protein LOC103493280 isoform X1 [Cucumis melo])

HSP 1 Score: 74.3 bits (181), Expect = 3.8e-10
Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 0

Query: 1   MQDWMNCVKEK-------KSSRFKLLLALEMGRGC-RKGCLKM---------FSLVLLAL 60
           M DWM+ VKEK       KS +FK +   ++   C RKG  ++          S  +  +
Sbjct: 617 MHDWMDFVKEKNSALFKAKSEKFKSMKKKQLPHTCSRKGYARLEEEMKKSSPDSSAVTRV 676

Query: 61  EMFVVGFRNRN---EYLRIYAIYEHIKEIDNEGINISSNNVANDTISKVLDPNRDHIRAF 120
            ++    R ++      ++    E I++IDNEGIN  SNN  N+TISKVL  +R HI A 
Sbjct: 677 AVWAKAHRKKDGNPVNSQVAEALERIEQIDNEGINTISNNAVNETISKVLGSDRSHIGAL 736

Query: 121 GFGVTSSNFCLLSKKYGQYVKLKE 125
           GFG T   F LLS+    Y +L+E
Sbjct: 737 GFGATIKKFSLLSQLDSHYAELEE 760

BLAST of CsGy3G005460 vs. TrEMBL
Match: tr|A0A0A0L5I2|A0A0A0L5I2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G113900 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.6e-12
Identity = 52/125 (41.60%), Postives = 69/125 (55.20%), Query Frame = 0

Query: 1    MQDWMNCVKEKKSSRFKLLLALEMGRGCRKGCLKMFSLVLLALEMFVVGFRNRNEY-LRI 60
            M DWMN VKEKKS+ FK           +KGC    S+  +A+       ++ N    ++
Sbjct: 944  MHDWMNFVKEKKSAMFK-----------KKGCPDSSSVSRVAVWAKAHRKKDGNPVNSQV 1003

Query: 61   YAIYEHIKEIDNEGINISSNNVANDTISKVLDPNRDHIRAFGFGVTSSNFCLLSKKYGQY 120
                E I++IDNEGI  +SNNV N+ ISKVL  +R    A GFGVT   F LLS+  G Y
Sbjct: 1004 AEALERIEQIDNEGIKTTSNNVGNEAISKVLGSDRGDTGALGFGVTVKKFSLLSQLDGHY 1057

Query: 121  VKLKE 125
             +L+E
Sbjct: 1064 AELEE 1057

BLAST of CsGy3G005460 vs. TrEMBL
Match: tr|A0A1S4DZ27|A0A1S4DZ27_CUCME (uncharacterized protein LOC103493280 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493280 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.5e-10
Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 0

Query: 1   MQDWMNCVKEK-------KSSRFKLLLALEMGRGC-RKGCLKM---------FSLVLLAL 60
           M DWM+ VKEK       KS +FK +   ++   C RKG  ++          S  +  +
Sbjct: 616 MHDWMDFVKEKNSALFKAKSEKFKSMKKKQLPHTCSRKGYARLEEEMKKSSPDSSAVTRV 675

Query: 61  EMFVVGFRNRN---EYLRIYAIYEHIKEIDNEGINISSNNVANDTISKVLDPNRDHIRAF 120
            ++    R ++      ++    E I++IDNEGIN  SNN  N+TISKVL  +R HI A 
Sbjct: 676 AVWAKAHRKKDGNPVNSQVAEALERIEQIDNEGINTISNNAVNETISKVLGSDRSHIGAL 735

Query: 121 GFGVTSSNFCLLSKKYGQYVKLKE 125
           GFG T   F LLS+    Y +L+E
Sbjct: 736 GFGATIKKFSLLSQLDSHYAELEE 759

BLAST of CsGy3G005460 vs. TrEMBL
Match: tr|A0A1S4DZ36|A0A1S4DZ36_CUCME (uncharacterized protein LOC103493280 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493280 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.5e-10
Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 0

Query: 1   MQDWMNCVKEK-------KSSRFKLLLALEMGRGC-RKGCLKM---------FSLVLLAL 60
           M DWM+ VKEK       KS +FK +   ++   C RKG  ++          S  +  +
Sbjct: 617 MHDWMDFVKEKNSALFKAKSEKFKSMKKKQLPHTCSRKGYARLEEEMKKSSPDSSAVTRV 676

Query: 61  EMFVVGFRNRN---EYLRIYAIYEHIKEIDNEGINISSNNVANDTISKVLDPNRDHIRAF 120
            ++    R ++      ++    E I++IDNEGIN  SNN  N+TISKVL  +R HI A 
Sbjct: 677 AVWAKAHRKKDGNPVNSQVAEALERIEQIDNEGINTISNNAVNETISKVLGSDRSHIGAL 736

Query: 121 GFGVTSSNFCLLSKKYGQYVKLKE 125
           GFG T   F LLS+    Y +L+E
Sbjct: 737 GFGATIKKFSLLSQLDSHYAELEE 760

BLAST of CsGy3G005460 vs. TrEMBL
Match: tr|A0A1S4DZ35|A0A1S4DZ35_CUCME (uncharacterized protein LOC103493280 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103493280 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.5e-10
Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 0

Query: 1   MQDWMNCVKEK-------KSSRFKLLLALEMGRGC-RKGCLKM---------FSLVLLAL 60
           M DWM+ VKEK       KS +FK +   ++   C RKG  ++          S  +  +
Sbjct: 606 MHDWMDFVKEKNSALFKAKSEKFKSMKKKQLPHTCSRKGYARLEEEMKKSSPDSSAVTRV 665

Query: 61  EMFVVGFRNRN---EYLRIYAIYEHIKEIDNEGINISSNNVANDTISKVLDPNRDHIRAF 120
            ++    R ++      ++    E I++IDNEGIN  SNN  N+TISKVL  +R HI A 
Sbjct: 666 AVWAKAHRKKDGNPVNSQVAEALERIEQIDNEGINTISNNAVNETISKVLGSDRSHIGAL 725

Query: 121 GFGVTSSNFCLLSKKYGQYVKLKE 125
           GFG T   F LLS+    Y +L+E
Sbjct: 726 GFGATIKKFSLLSQLDSHYAELEE 749

BLAST of CsGy3G005460 vs. TrEMBL
Match: tr|A0A1S4DZT1|A0A1S4DZT1_CUCME (uncharacterized protein LOC103493280 isoform X7 OS=Cucumis melo OX=3656 GN=LOC103493280 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.5e-10
Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 0

Query: 1   MQDWMNCVKEK-------KSSRFKLLLALEMGRGC-RKGCLKM---------FSLVLLAL 60
           M DWM+ VKEK       KS +FK +   ++   C RKG  ++          S  +  +
Sbjct: 390 MHDWMDFVKEKNSALFKAKSEKFKSMKKKQLPHTCSRKGYARLEEEMKKSSPDSSAVTRV 449

Query: 61  EMFVVGFRNRN---EYLRIYAIYEHIKEIDNEGINISSNNVANDTISKVLDPNRDHIRAF 120
            ++    R ++      ++    E I++IDNEGIN  SNN  N+TISKVL  +R HI A 
Sbjct: 450 AVWAKAHRKKDGNPVNSQVAEALERIEQIDNEGINTISNNAVNETISKVLGSDRSHIGAL 509

Query: 121 GFGVTSSNFCLLSKKYGQYVKLKE 125
           GFG T   F LLS+    Y +L+E
Sbjct: 510 GFGATIKKFSLLSQLDSHYAELEE 533

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN56299.17.0e-1241.60hypothetical protein Csa_3G113900 [Cucumis sativus][more]
XP_011650589.12.3e-1036.81PREDICTED: uncharacterized protein LOC101217008 isoform X1 [Cucumis sativus] >XP... [more]
XP_011650591.12.3e-1036.81PREDICTED: uncharacterized protein LOC101217008 isoform X2 [Cucumis sativus][more]
XP_011650592.12.3e-1036.81PREDICTED: uncharacterized protein LOC101217008 isoform X3 [Cucumis sativus][more]
XP_016901232.13.8e-1036.11PREDICTED: uncharacterized protein LOC103493280 isoform X1 [Cucumis melo] >XP_01... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0L5I2|A0A0A0L5I2_CUCSA4.6e-1241.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G113900 PE=4 SV=1[more]
tr|A0A1S4DZ27|A0A1S4DZ27_CUCME2.5e-1036.11uncharacterized protein LOC103493280 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S4DZ36|A0A1S4DZ36_CUCME2.5e-1036.11uncharacterized protein LOC103493280 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S4DZ35|A0A1S4DZ35_CUCME2.5e-1036.11uncharacterized protein LOC103493280 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S4DZT1|A0A1S4DZT1_CUCME2.5e-1036.11uncharacterized protein LOC103493280 isoform X7 OS=Cucumis melo OX=3656 GN=LOC10... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G005460.1CsGy3G005460.1mRNA