CsGy2G027240 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCGGCCTTCTCATGGCTTATCTTTCTATGTGCATTCAACCACAGAAAATTCAAGAAGATGTTGGGTAAACTCCAGCACGAGGCAGTTATTGACGTCCCGGCCAACGTGACATGGCAGCTCTTCGGCAGCCTTGAACTTGGACGAATTGTGGGAGAACAACTTCCGAATCTTTTTGAGAAAATCGAATTAGTTGAAGGTGATGGAGGAGAAGGAACTGTTCTTAATCTCATTTTTGCTCCAGGTAACAATTTGTAGTAATCTCTTCCATTGTTTCATCTTCCCATTCTAAATTTTCGAGAAATTTTTATTGAAAGTCGTTTTATGTTCGATACTCAGTAATAACTCAGACTACACATCTATCTCTGTTCATTCCCTTCAATTACAAGGATAATTTAGACCATCCATTAGGTTTTTTTTTTTAATAACATTAAGATTTAAGATTTTTTTTTGTCAGAGTAGGGTTAATAAATTTAAGATTAGACCATAGAGAATATATATAGTAAAAACCAGAACATTTATTTTTAAAAAATTTTACTACGAATTCAACTTTCTTGAGTAAGAAAGAAGCAAATAGTTAATTTAGAGTATAGGTTCATGTTGAGTATAATTTAATCTAAACGAGCACAATTCACCTACTTTTGATCTTTAACATGCTGAGTCTTGACTTCTGAGACAAACGTGAAAATGTGTGGACATTAATGCAGGTTTAGGTACCTCAAGTTATAAAGAGAAATTTACAAAAATAGATAATGAGAATCGTATAAAAGAGACAGAGATAGTGGAAGGAGGATTCTTGAACATTGGATTTACTCTCTATAGGGTTCGTTTCAAGATAATTGAGAATGGTGAAGATAAGTGTATTGTTGAAACGACAATTGAATATGAAATCATGGAAGAAGCTGCTGCAAATGCTTCACTTGTTACTCTACAACCTCTCATTGAGATTGTTCAACTTGCAAATAACTATCTCCTTCACAACAAAAACCCTAAATAGAGATGCATTAAATCATATGATGAAATCTATTGTCATCCTTTGGAGTTGTTTTCCCCCTATCTACAATAATAATAGCATCATAAAAGGTTCTGAGTACTTGAGTTATACTCAATTTATTTGAGTTTAATTTCTTGTGTAATCTTTTATATCTTGATATCAGTGTGTGGGAAACTTTTTCTAACTTCTTTTTCATATGAAACATTGTGCATCCATATGAATATGTAACATGATTATTCAAATATTGTACATATATTATTACCCATGGAATGAAGGAAAACTGGAAGGAAAAGATTGTTTTTCCTTTAAAA GTCGGCCTTCTCATGGCTTATCTTTCTATGTGCATTCAACCACAGAAAATTCAAGAAGATGTTGGGTAAACTCCAGCACGAGGCAGTTATTGACGTCCCGGCCAACGTGACATGGCAGCTCTTCGGCAGCCTTGAACTTGGACGAATTGTGGGAGAACAACTTCCGAATCTTTTTGAGAAAATCGAATTAGTTGAAGGTGATGGAGGAGAAGGAACTGTTCTTAATCTCATTTTTGCTCCAGGTTTAGGTACCTCAAGTTATAAAGAGAAATTTACAAAAATAGATAATGAGAATCGTATAAAAGAGACAGAGATAGTGGAAGGAGGATTCTTGAACATTGGATTTACTCTCTATAGGGTTCGTTTCAAGATAATTGAGAATGGTGAAGATAAGTGTATTGTTGAAACGACAATTGAATATGAAATCATGGAAGAAGCTGCTGCAAATGCTTCACTTGTTACTCTACAACCTCTCATTGAGATTGTTCAACTTGCAAATAACTATCTCCTTCACAACAAAAACCCTAAATAGAGATGCATTAAATCATATGATGAAATCTATTGTCATCCTTTGGAGTTGTTTTCCCCCTATCTACAATAATAATAGCATCATAAAAGGTTCTGAGTACTTGAGTTATACTCAATTTATTTGAGTTTAATTTCTTGTGTAATCTTTTATATCTTGATATCAGTGTGTGGGAAACTTTTTCTAACTTCTTTTTCATATGAAACATTGTGCATCCATATGAATATGTAACATGATTATTCAAATATTGTACATATATTATTACCCATGGAATGAAGGAAAACTGGAAGGAAAAGATTGTTTTTCCTTTAAAA ATGTTGGGTAAACTCCAGCACGAGGCAGTTATTGACGTCCCGGCCAACGTGACATGGCAGCTCTTCGGCAGCCTTGAACTTGGACGAATTGTGGGAGAACAACTTCCGAATCTTTTTGAGAAAATCGAATTAGTTGAAGGTGATGGAGGAGAAGGAACTGTTCTTAATCTCATTTTTGCTCCAGGTTTAGGTACCTCAAGTTATAAAGAGAAATTTACAAAAATAGATAATGAGAATCGTATAAAAGAGACAGAGATAGTGGAAGGAGGATTCTTGAACATTGGATTTACTCTCTATAGGGTTCGTTTCAAGATAATTGAGAATGGTGAAGATAAGTGTATTGTTGAAACGACAATTGAATATGAAATCATGGAAGAAGCTGCTGCAAATGCTTCACTTGTTACTCTACAACCTCTCATTGAGATTGTTCAACTTGCAAATAACTATCTCCTTCACAACAAAAACCCTAAATAG MLGKLQHEAVIDVPANVTWQLFGSLELGRIVGEQLPNLFEKIELVEGDGGEGTVLNLIFAPGLGTSSYKEKFTKIDNENRIKETEIVEGGFLNIGFTLYRVRFKIIENGEDKCIVETTIEYEIMEEAAANASLVTLQPLIEIVQLANNYLLHNKNPK
BLAST of CsGy2G027240 vs. NCBI nr
Match: XP_004148085.1 (PREDICTED: S-norcoclaurine synthase-like [Cucumis sativus] >KGN63405.1 hypothetical protein Csa_2G439140 [Cucumis sativus]) HSP 1 Score: 312.8 bits (800), Expect = 6.8e-82 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of CsGy2G027240 vs. NCBI nr
Match: XP_008459186.1 (PREDICTED: S-norcoclaurine synthase 2-like [Cucumis melo]) HSP 1 Score: 289.3 bits (739), Expect = 8.0e-75 Identity = 141/157 (89.81%), Postives = 150/157 (95.54%), Query Frame = 0
BLAST of CsGy2G027240 vs. NCBI nr
Match: XP_022986627.1 (S-norcoclaurine synthase 2-like [Cucurbita maxima]) HSP 1 Score: 241.5 bits (615), Expect = 1.9e-60 Identity = 121/158 (76.58%), Postives = 135/158 (85.44%), Query Frame = 0
BLAST of CsGy2G027240 vs. NCBI nr
Match: XP_022943440.1 (S-norcoclaurine synthase 1-like [Cucurbita moschata]) HSP 1 Score: 241.1 bits (614), Expect = 2.5e-60 Identity = 121/158 (76.58%), Postives = 135/158 (85.44%), Query Frame = 0
BLAST of CsGy2G027240 vs. NCBI nr
Match: XP_023522409.1 (S-norcoclaurine synthase 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 238.8 bits (608), Expect = 1.2e-59 Identity = 116/158 (73.42%), Postives = 134/158 (84.81%), Query Frame = 0
BLAST of CsGy2G027240 vs. TAIR10
Match: AT5G45860.1 (PYR1-like 11) HSP 1 Score: 44.7 bits (104), Expect = 6.2e-05 Identity = 28/110 (25.45%), Postives = 48/110 (43.64%), Query Frame = 0
BLAST of CsGy2G027240 vs. Swiss-Prot
Match: sp|Q4QTJ1|NCS2_PAPSO (S-norcoclaurine synthase 2 OS=Papaver somniferum OX=3469 GN=NCS2 PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 4.7e-26 Identity = 54/153 (35.29%), Postives = 100/153 (65.36%), Query Frame = 0
BLAST of CsGy2G027240 vs. Swiss-Prot
Match: sp|Q4QTJ2|NCS1_PAPSO (S-norcoclaurine synthase 1 OS=Papaver somniferum OX=3469 GN=NCS1 PE=1 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 4.0e-25 Identity = 55/153 (35.95%), Postives = 97/153 (63.40%), Query Frame = 0
BLAST of CsGy2G027240 vs. Swiss-Prot
Match: sp|Q67A25|NCS_THLFG (S-norcoclaurine synthase OS=Thalictrum flavum subsp. glaucum OX=150095 PE=1 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.8e-22 Identity = 50/152 (32.89%), Postives = 89/152 (58.55%), Query Frame = 0
BLAST of CsGy2G027240 vs. Swiss-Prot
Match: sp|A2A1A1|NCS2_COPJA (S-norcoclaurine synthase 2 OS=Coptis japonica OX=3442 GN=PR10A PE=2 SV=2) HSP 1 Score: 100.1 bits (248), Expect = 2.3e-20 Identity = 53/143 (37.06%), Postives = 82/143 (57.34%), Query Frame = 0
BLAST of CsGy2G027240 vs. Swiss-Prot
Match: sp|G7J032|PHBP_MEDTR (Phytohormone-binding protein OS=Medicago truncatula OX=3880 GN=MTR_3g055120 PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 5.0e-12 Identity = 40/131 (30.53%), Postives = 70/131 (53.44%), Query Frame = 0
BLAST of CsGy2G027240 vs. TrEMBL
Match: tr|A0A0A0LNC6|A0A0A0LNC6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G439140 PE=4 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 4.5e-82 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of CsGy2G027240 vs. TrEMBL
Match: tr|A0A1S3CA50|A0A1S3CA50_CUCME (S-norcoclaurine synthase 2-like OS=Cucumis melo OX=3656 GN=LOC103498383 PE=4 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 5.3e-75 Identity = 141/157 (89.81%), Postives = 150/157 (95.54%), Query Frame = 0
BLAST of CsGy2G027240 vs. TrEMBL
Match: tr|A0A1S2YJT3|A0A1S2YJT3_CICAR (S-norcoclaurine synthase-like OS=Cicer arietinum OX=3827 GN=LOC101513514 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 1.8e-51 Identity = 98/158 (62.03%), Postives = 130/158 (82.28%), Query Frame = 0
BLAST of CsGy2G027240 vs. TrEMBL
Match: tr|I1LP68|I1LP68_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_12G017100 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 3.5e-50 Identity = 98/158 (62.03%), Postives = 126/158 (79.75%), Query Frame = 0
BLAST of CsGy2G027240 vs. TrEMBL
Match: tr|A0A0B2SNQ7|A0A0B2SNQ7_GLYSO (S-norcoclaurine synthase OS=Glycine soja OX=3848 GN=glysoja_035139 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 3.5e-50 Identity = 98/158 (62.03%), Postives = 126/158 (79.75%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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