CsGy2G027230 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAGGGAGATAAGTAATGAGAGTGAGATTCAGGCGCCGGCGGCCAAAGTTTGGGATCTCTACGGCGGCCTTGAGATGGTAAACTTCATCCCAGTTCACCTCCCCAATCTCGTCCACAAAATTGACGTCCTCCAAGGCGACGGAGGCGAAGGAACTCTTCTCCATATCACTTTTGCACATGGTATATCTTCATTACTACTCCCTCTATAATTATATCGTCTGTTAATAATTTTCTTTCTACCATCTGCAATTATGACCTCTTCATCAATTAATACATATTTAATTAAAATTTCTTAAAAATTCATGCATACTTACGTTATTGAGTTTTGAAACGTGTTAGAGTAAGATTCCATGAATTAATAAACACATCTAAGATTGATTGTATAAGTACTACGTTAATACAGAATAACACTCACATTTTACGTGTTTTTTTGTGCAGTATATTTCAATCGATACACCAAAACATAGTTATAGAAGAGAGACATAGAAATAGTGATTGAAATATTTTTAATTATGTATTTAAGTATTAAGTAAATTACTCAAATTTAGAACTCAACAGGAAAAGACAAACTACAACATCTTATATTATTATTAGACATAGAGGATATATAAAACTGAAAATCATAAAAATAAGAAATCAGACTTATTTTATTTATTTTTTATTTTCGAATTTTAGAGAATCATAAAATTATAAATATTTATAGGACCACTTGGATCATAAATATTATTTTTTATGGGTATGAATGTTAAATAATACCAGATATATTTAAATTTCTATTGTACTTAATATGTAAGATTATTAGTATTTGATCTACCAATTTTATATGTAAGTTGAAATCAAATAAAGCCAAAAGAAAAATAAATTTAGTATTATTTAATATAATCTTATATTAATTAATTAGTTAATCTATTAAAATATAAACAAATAAAATTAGGAGGCTTTTTAAACCTAAAAAATGAGTCAAACTATCTATAAGACACTAACAAATCTATTTTTTCCATTGCAAATCTATAGACATTAATATAAGTTTATTCAGGTGTTTTACTTAAAATTTATTAAAGTTAAAATAATATATGTAGATTTAATAACTAATTAAAATTAAGAGTAATAAATGATTGATATTAATTTTATTAATCAAATTATATTTTTACTAATTAATCTTCCAAATATAAAAATTCTACCGTATGAAAAGTATTAGAAAACCAATGTCCAATTGGCTTTTAAATTAGTTGTTTGGTTAATAATCGAAACATGAAGATACGACGATGGATAGAAATTTCGACATATGGACAAAAAAATTATGACTATGATTATAACATACATACAGGTTTAGGAGGTCCTACAAGTTACAAAGAGAAGTTCGTGAAGATAGATAACGAAAATCGTATTAAAATAGCAGAAACGGTCGAAGGAGGTTACTTAGATCTTGGGTTTACTCTTTACAAGTTTCGTGTGGAGATAATTGAGAAAAATGAAGAAAGTTGCATTGTAAAATCAACTGTTGAATATGAATTGAAGAAAGAAGCTGCTTCAAATATTTCATTGGCAAGTGTTCAACCTTTGGTAGCCATTGCTCAAGCTGTCAACAACTATTTCCTCAATACTACTCGTCAGCCACATGTTAAAGGTGATGCATAATTCGATCCAATTCATATTGATCAGTACCTATGTATTAGTTTTTGCTTAATTAACGTTCCATCTCGTAACAATTTGATTTTTGAGAATTATACATTATACACTACTTACCTGTCGATATTTTTTGTCCCTTTTATTATCTAATTCTTTT ATGGTGAGGGAGATAAGTAATGAGAGTGAGATTCAGGCGCCGGCGGCCAAAGTTTGGGATCTCTACGGCGGCCTTGAGATGGTAAACTTCATCCCAGTTCACCTCCCCAATCTCGTCCACAAAATTGACGTCCTCCAAGGCGACGGAGGCGAAGGAACTCTTCTCCATATCACTTTTGCACATGGTTTAGGAGGTCCTACAAGTTACAAAGAGAAGTTCGTGAAGATAGATAACGAAAATCGTATTAAAATAGCAGAAACGGTCGAAGGAGGTTACTTAGATCTTGGGTTTACTCTTTACAAGTTTCGTGTGGAGATAATTGAGAAAAATGAAGAAAGTTGCATTGTAAAATCAACTGTTGAATATGAATTGAAGAAAGAAGCTGCTTCAAATATTTCATTGGCAAGTGTTCAACCTTTGGTAGCCATTGCTCAAGCTGTCAACAACTATTTCCTCAATACTACTCGTCAGCCACATGTTAAAGGTGATGCATAATTCGATCCAATTCATATTGATCAGTACCTATGTATTAGTTTTTGCTTAATTAACGTTCCATCTCGTAACAATTTGATTTTTGAGAATTATACATTATACACTACTTACCTGTCGATATTTTTTGTCCCTTTTATTATCTAATTCTTTT ATGGTGAGGGAGATAAGTAATGAGAGTGAGATTCAGGCGCCGGCGGCCAAAGTTTGGGATCTCTACGGCGGCCTTGAGATGGTAAACTTCATCCCAGTTCACCTCCCCAATCTCGTCCACAAAATTGACGTCCTCCAAGGCGACGGAGGCGAAGGAACTCTTCTCCATATCACTTTTGCACATGGTTTAGGAGGTCCTACAAGTTACAAAGAGAAGTTCGTGAAGATAGATAACGAAAATCGTATTAAAATAGCAGAAACGGTCGAAGGAGGTTACTTAGATCTTGGGTTTACTCTTTACAAGTTTCGTGTGGAGATAATTGAGAAAAATGAAGAAAGTTGCATTGTAAAATCAACTGTTGAATATGAATTGAAGAAAGAAGCTGCTTCAAATATTTCATTGGCAAGTGTTCAACCTTTGGTAGCCATTGCTCAAGCTGTCAACAACTATTTCCTCAATACTACTCGTCAGCCACATGTTAAAGGTGATGCATAA MVREISNESEIQAPAAKVWDLYGGLEMVNFIPVHLPNLVHKIDVLQGDGGEGTLLHITFAHGLGGPTSYKEKFVKIDNENRIKIAETVEGGYLDLGFTLYKFRVEIIEKNEESCIVKSTVEYELKKEAASNISLASVQPLVAIAQAVNNYFLNTTRQPHVKGDA
BLAST of CsGy2G027230 vs. NCBI nr
Match: XP_011650080.1 (PREDICTED: S-norcoclaurine synthase-like [Cucumis sativus] >KGN63404.1 hypothetical protein Csa_2G437140 [Cucumis sativus]) HSP 1 Score: 330.5 bits (846), Expect = 3.3e-87 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
BLAST of CsGy2G027230 vs. NCBI nr
Match: XP_008466589.1 (PREDICTED: S-norcoclaurine synthase 1-like [Cucumis melo]) HSP 1 Score: 293.9 bits (751), Expect = 3.4e-76 Identity = 143/164 (87.20%), Postives = 154/164 (93.90%), Query Frame = 0
BLAST of CsGy2G027230 vs. NCBI nr
Match: XP_022148579.1 (S-norcoclaurine synthase 1-like isoform X1 [Momordica charantia]) HSP 1 Score: 255.0 bits (650), Expect = 1.7e-64 Identity = 125/159 (78.62%), Postives = 144/159 (90.57%), Query Frame = 0
BLAST of CsGy2G027230 vs. NCBI nr
Match: XP_008459187.1 (PREDICTED: S-norcoclaurine synthase 1-like [Cucumis melo]) HSP 1 Score: 228.4 bits (581), Expect = 1.8e-56 Identity = 112/153 (73.20%), Postives = 134/153 (87.58%), Query Frame = 0
BLAST of CsGy2G027230 vs. NCBI nr
Match: XP_004148088.1 (PREDICTED: S-norcoclaurine synthase-like [Cucumis sativus] >KGN63403.1 hypothetical protein Csa_2G437130 [Cucumis sativus]) HSP 1 Score: 222.6 bits (566), Expect = 9.6e-55 Identity = 108/153 (70.59%), Postives = 132/153 (86.27%), Query Frame = 0
BLAST of CsGy2G027230 vs. TAIR10
Match: AT5G45860.1 (PYR1-like 11) HSP 1 Score: 41.6 bits (96), Expect = 5.5e-04 Identity = 25/110 (22.73%), Postives = 50/110 (45.45%), Query Frame = 0
BLAST of CsGy2G027230 vs. Swiss-Prot
Match: sp|Q4QTJ2|NCS1_PAPSO (S-norcoclaurine synthase 1 OS=Papaver somniferum OX=3469 GN=NCS1 PE=1 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 8.9e-28 Identity = 63/157 (40.13%), Postives = 100/157 (63.69%), Query Frame = 0
BLAST of CsGy2G027230 vs. Swiss-Prot
Match: sp|Q4QTJ1|NCS2_PAPSO (S-norcoclaurine synthase 2 OS=Papaver somniferum OX=3469 GN=NCS2 PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 4.9e-26 Identity = 61/157 (38.85%), Postives = 97/157 (61.78%), Query Frame = 0
BLAST of CsGy2G027230 vs. Swiss-Prot
Match: sp|Q67A25|NCS_THLFG (S-norcoclaurine synthase OS=Thalictrum flavum subsp. glaucum OX=150095 PE=1 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.1e-24 Identity = 57/153 (37.25%), Postives = 91/153 (59.48%), Query Frame = 0
BLAST of CsGy2G027230 vs. Swiss-Prot
Match: sp|A2A1A1|NCS2_COPJA (S-norcoclaurine synthase 2 OS=Coptis japonica OX=3442 GN=PR10A PE=2 SV=2) HSP 1 Score: 99.0 bits (245), Expect = 5.2e-20 Identity = 52/142 (36.62%), Postives = 82/142 (57.75%), Query Frame = 0
BLAST of CsGy2G027230 vs. Swiss-Prot
Match: sp|G7J032|PHBP_MEDTR (Phytohormone-binding protein OS=Medicago truncatula OX=3880 GN=MTR_3g055120 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.9e-09 Identity = 33/127 (25.98%), Postives = 60/127 (47.24%), Query Frame = 0
BLAST of CsGy2G027230 vs. TrEMBL
Match: tr|A0A0A0LQZ3|A0A0A0LQZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G437140 PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 2.2e-87 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
BLAST of CsGy2G027230 vs. TrEMBL
Match: tr|A0A1S3CRM6|A0A1S3CRM6_CUCME (S-norcoclaurine synthase 1-like OS=Cucumis melo OX=3656 GN=LOC103503964 PE=4 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 2.2e-76 Identity = 143/164 (87.20%), Postives = 154/164 (93.90%), Query Frame = 0
BLAST of CsGy2G027230 vs. TrEMBL
Match: tr|A0A1S3CAU0|A0A1S3CAU0_CUCME (S-norcoclaurine synthase 1-like OS=Cucumis melo OX=3656 GN=LOC103498385 PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 1.2e-56 Identity = 112/153 (73.20%), Postives = 134/153 (87.58%), Query Frame = 0
BLAST of CsGy2G027230 vs. TrEMBL
Match: tr|A0A0A0LNL8|A0A0A0LNL8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G437130 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 6.4e-55 Identity = 108/153 (70.59%), Postives = 132/153 (86.27%), Query Frame = 0
BLAST of CsGy2G027230 vs. TrEMBL
Match: tr|A0A151TLT9|A0A151TLT9_CAJCA (S-norcoclaurine synthase OS=Cajanus cajan OX=3821 GN=KK1_021617 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 8.6e-44 Identity = 88/150 (58.67%), Postives = 111/150 (74.00%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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