CsGy2G019270 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G019270
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Patatin
Location	Chr2 : 28707603 .. 28708112 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTACAGGAGATTCCTCGTCATCTCTCTCGGCACCGGTGCTCCCAAGGCGGAGATGAAATTCACGGCGGATCAAGCTGCCCAATGGGGGCTCTTTGGATGGCTAACTGCCGGGGGCTCCACCCCGATAATCGACGCCTTTTATCAGGCTAGCTCCGACATGGTAGATTTCAATCTCTCTGTGGTTTTTCAAGCCCTTCATTGTGAAGACAAGTACCTCCGTATTCAGGTCAATTTTCGGCCAAATTAATGCATTTTTCCATTCTCAGTACAATTAATATATAATTTAATTAATATAAATCGTTTATAAAAAAATTAGGATGATACCCTAAGCAATGAAGTGTCGACGTTGGATGAGGCAACAGAGAAGAATTTAGAAGGTCTTGTAAAAGTGGGAGAAGCGCTTCTGAAAAAACCAGTTTCAAAAGTGAATCTCGAGACTGGCATCTTCCAGACTTCGGATTCACAGACCAACGAAGAAGCTCTCATCAGGTCGCCCCTCCTCTAA

mRNA sequence

ATGGACTACAGGAGATTCCTCGTCATCTCTCTCGGCACCGGTGCTCCCAAGGCGGAGATGAAATTCACGGCGGATCAAGCTGCCCAATGGGGGCTCTTTGGATGGCTAACTGCCGGGGGCTCCACCCCGATAATCGACGCCTTTTATCAGGCTAGCTCCGACATGGTAGATTTCAATCTCTCTGTGGTTTTTCAAGCCCTTCATTGTGAAGACAAGTACCTCCGTATTCAGGATGATACCCTAAGCAATGAAGTGTCGACGTTGGATGAGGCAACAGAGAAGAATTTAGAAGGTCTTGTAAAAGTGGGAGAAGCGCTTCTGAAAAAACCAGTTTCAAAAGTGAATCTCGAGACTGGCATCTTCCAGACTTCGGATTCACAGACCAACGAAGAAGCTCTCATCAGGTCGCCCCTCCTCTAA

Coding sequence (CDS)

ATGGACTACAGGAGATTCCTCGTCATCTCTCTCGGCACCGGTGCTCCCAAGGCGGAGATGAAATTCACGGCGGATCAAGCTGCCCAATGGGGGCTCTTTGGATGGCTAACTGCCGGGGGCTCCACCCCGATAATCGACGCCTTTTATCAGGCTAGCTCCGACATGGTAGATTTCAATCTCTCTGTGGTTTTTCAAGCCCTTCATTGTGAAGACAAGTACCTCCGTATTCAGGATGATACCCTAAGCAATGAAGTGTCGACGTTGGATGAGGCAACAGAGAAGAATTTAGAAGGTCTTGTAAAAGTGGGAGAAGCGCTTCTGAAAAAACCAGTTTCAAAAGTGAATCTCGAGACTGGCATCTTCCAGACTTCGGATTCACAGACCAACGAAGAAGCTCTCATCAGGTCGCCCCTCCTCTAA

Protein sequence

MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNLSVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGIFQTSDSQTNEEALIRSPLL

Homology

[Close]

BLAST of CsGy2G019270 vs. NCBI nr
Match: KGN62539.1 (hypothetical protein Csa_2G360560 [Cucumis sativus])

HSP 1 Score: 268.1 bits (684), Expect = 1.7e-68
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL 60
           MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL
Sbjct: 162 MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL 221

Query: 61  SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 120
           SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI
Sbjct: 222 SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 281

Query: 121 FQTSDSQTNEEALIR 136
           FQTSDSQTNEEALIR
Sbjct: 282 FQTSDSQTNEEALIR 296

[Close]

BLAST of CsGy2G019270 vs. NCBI nr
Match: XP_004152795.2 (PREDICTED: patatin-like protein 2 [Cucumis sativus])

HSP 1 Score: 268.1 bits (684), Expect = 1.7e-68
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL 60
           MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL
Sbjct: 246 MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL 305

Query: 61  SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 120
           SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI
Sbjct: 306 SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 365

Query: 121 FQTSDSQTNEEALIR 136
           FQTSDSQTNEEALIR
Sbjct: 366 FQTSDSQTNEEALIR 380

[Close]

BLAST of CsGy2G019270 vs. NCBI nr
Match: XP_008444641.1 (PREDICTED: patatin-like protein 2 isoform X1 [Cucumis melo])

HSP 1 Score: 265.8 bits (678), Expect = 8.4e-68
Identity = 133/135 (98.52%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL 60
           MDY+RFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGG+TPIIDAFYQASSDMVDFNL
Sbjct: 246 MDYKRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGTTPIIDAFYQASSDMVDFNL 305

Query: 61  SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 120
           SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI
Sbjct: 306 SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 365

Query: 121 FQTSDSQTNEEALIR 136
           FQTSDSQTNEEALIR
Sbjct: 366 FQTSDSQTNEEALIR 380

[Close]

BLAST of CsGy2G019270 vs. NCBI nr
Match: XP_008444642.1 (PREDICTED: patatin-like protein 2 isoform X2 [Cucumis melo])

HSP 1 Score: 265.8 bits (678), Expect = 8.4e-68
Identity = 133/135 (98.52%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL 60
           MDY+RFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGG+TPIIDAFYQASSDMVDFNL
Sbjct: 245 MDYKRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGTTPIIDAFYQASSDMVDFNL 304

Query: 61  SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 120
           SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI
Sbjct: 305 SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 364

Query: 121 FQTSDSQTNEEALIR 136
           FQTSDSQTNEEALIR
Sbjct: 365 FQTSDSQTNEEALIR 379

[Close]

BLAST of CsGy2G019270 vs. NCBI nr
Match: XP_022996967.1 (patatin-like protein 2 isoform X2 [Cucurbita maxima])

HSP 1 Score: 206.5 bits (524), Expect = 6.0e-50
Identity = 103/141 (73.05%), Postives = 122/141 (86.52%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL 60
           MDYRRFLVISLGTGAPK+EMK+TA+QAA+WG+  WLT GGSTPIID F +ASSDMVD +L
Sbjct: 244 MDYRRFLVISLGTGAPKSEMKYTAEQAAEWGMLDWLTNGGSTPIIDVFSRASSDMVDLHL 303

Query: 61  SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 120
           SV+FQAL CE  YLRIQDDTLS +V+++D AT+KNL  LVKVGE LLKKPVS+VNLETGI
Sbjct: 304 SVIFQALRCEQNYLRIQDDTLSGKVASVDVATQKNLNDLVKVGEGLLKKPVSRVNLETGI 363

Query: 121 FQ--TSDSQTNEEALIRSPLL 140
           F+   S+S+TNE+ALIR  +L
Sbjct: 364 FEDCISNSETNEQALIRFAML 384

[Close]

BLAST of CsGy2G019270 vs. TAIR10
Match: AT2G26560.1 (phospholipase A 2A)

HSP 1 Score: 160.6 bits (405), Expect = 6.9e-40
Identity = 81/134 (60.45%), Postives = 101/134 (75.37%), Query Frame = 0


Query: 2   DYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNLS 61
           DY RFLV+SLGTG  KAE KF A + A WGL  WLT   STPIIDAF QASSDMVDF+LS
Sbjct: 249 DYGRFLVLSLGTGNHKAEEKFNAKEVAGWGLLNWLTHDNSTPIIDAFSQASSDMVDFHLS 308

Query: 62  VVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGIF 121
            VF+ALH E  Y+RIQDDTL+ + +++D AT +NL+ L K G+ LLKKPV++VNL++G  
Sbjct: 309 AVFRALHSEANYIRIQDDTLTGDAASVDIATVENLDILAKTGDELLKKPVARVNLDSGCN 368

Query: 122 QTSDSQTNEEALIR 136
           + +   TNE ALI+
Sbjct: 369 ENAYETTNEHALIK 382

[Close]

BLAST of CsGy2G019270 vs. TAIR10
Match: AT4G37050.1 (PATATIN-like protein 4)

HSP 1 Score: 150.6 bits (379), Expect = 7.1e-37
Identity = 76/136 (55.88%), Postives = 103/136 (75.74%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL 60
           +D+ RFLVIS+GTG+ + + K+ A  A++WGL  W+   GSTPI+D + +A  DMVD+  
Sbjct: 272 LDFTRFLVISIGTGSIRNQEKYNAKMASKWGLMCWVFESGSTPILDCYSEAIHDMVDYQS 331

Query: 61  SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 120
           SVVFQAL  E  YLRI DD+L  ++ ++D +TEKN+EGLV+VGEALLKK VS+VNLE+G 
Sbjct: 332 SVVFQALRSEKNYLRIDDDSLKGDLGSVDISTEKNMEGLVEVGEALLKKRVSRVNLESGH 391

Query: 121 FQ-TSDSQTNEEALIR 136
           +Q  S++ TNEEAL R
Sbjct: 392 YQPISENVTNEEALKR 407

[Close]

BLAST of CsGy2G019270 vs. TAIR10
Match: AT4G37070.2 (Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein)

HSP 1 Score: 140.6 bits (353), Expect = 7.4e-34
Identity = 68/136 (50.00%), Postives = 100/136 (73.53%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL 60
           + + RFLVIS+GTG+ K E K++A +AA+WG+  WL   GSTPI+D   ++S DM+ ++ 
Sbjct: 248 LGFDRFLVISIGTGSTKREEKYSAKKAAKWGIISWLYDDGSTPILDITMESSRDMIHYHS 307

Query: 61  SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 120
           SVVF+AL  EDKYLRI DDTL  +VST+D AT+ NLE L K+GE +L   V ++N++TG+
Sbjct: 308 SVVFKALQSEDKYLRIDDDTLEGDVSTMDLATKSNLENLQKIGEKMLTNRVMQMNIDTGV 367

Query: 121 FQ-TSDSQTNEEALIR 136
           ++  +++ TN+E L R
Sbjct: 368 YEPVAENITNDEQLKR 383

[Close]

BLAST of CsGy2G019270 vs. TAIR10
Match: AT4G37060.2 (PATATIN-like protein 5)

HSP 1 Score: 134.8 bits (338), Expect = 4.1e-32
Identity = 64/136 (47.06%), Postives = 99/136 (72.79%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL 60
           + Y +FLVIS+GTG+ K E +++A +AA+WG+  WL   G+TPI+D  +++S D+V ++ 
Sbjct: 269 LGYDQFLVISIGTGSAKKEERYSAKKAAKWGIISWLYEDGTTPILDITFESSRDIVHYHS 328

Query: 61  SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 120
           SVVF+AL  EDKYLRI DDTL  + STLD +T+ NLE L+K+GE +L   V ++N++TG 
Sbjct: 329 SVVFKALQSEDKYLRIDDDTLEGDASTLDLSTKSNLENLIKLGEKMLTNRVMQMNIDTGT 388

Query: 121 FQ-TSDSQTNEEALIR 136
           ++  +++  N+E L R
Sbjct: 389 YEPAAENINNDEQLKR 404

[Close]

BLAST of CsGy2G019270 vs. TAIR10
Match: AT5G43590.1 (Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein)

HSP 1 Score: 104.4 bits (259), Expect = 5.9e-23
Identity = 52/133 (39.10%), Postives = 82/133 (61.65%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWL--TAGGSTPIIDAFYQASSDMVDF 60
           ++Y +++VIS+GTG+ K E  ++A +AA+WG   W       +TPI+D  +++S DMV +
Sbjct: 238 LEYEKYIVISIGTGSAKREEYYSAVEAAKWGFENWAYNWKHKTTPILDIIFESSRDMVQY 297

Query: 61  NLSVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLET 120
           + SV+FQAL  ED YLRI  DTL  +   +D++   NLE L  +GE LL   V ++NL+T
Sbjct: 298 HTSVLFQALESEDNYLRIDADTLKKDEVFMDDSETLNLENLKNIGEKLLDTNVMRMNLDT 357

Query: 121 GIFQTSDSQTNEE 132
             ++      N +
Sbjct: 358 YTYEPIPKTVNND 370

[Close]

BLAST of CsGy2G019270 vs. Swiss-Prot
Match: sp|O48723|PLP2_ARATH (Patatin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLP2 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.2e-38
Identity = 81/134 (60.45%), Postives = 101/134 (75.37%), Query Frame = 0


Query: 2   DYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNLS 61
           DY RFLV+SLGTG  KAE KF A + A WGL  WLT   STPIIDAF QASSDMVDF+LS
Sbjct: 249 DYGRFLVLSLGTGNHKAEEKFNAKEVAGWGLLNWLTHDNSTPIIDAFSQASSDMVDFHLS 308

Query: 62  VVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGIF 121
            VF+ALH E  Y+RIQDDTL+ + +++D AT +NL+ L K G+ LLKKPV++VNL++G  
Sbjct: 309 AVFRALHSEANYIRIQDDTLTGDAASVDIATVENLDILAKTGDELLKKPVARVNLDSGCN 368

Query: 122 QTSDSQTNEEALIR 136
           + +   TNE ALI+
Sbjct: 369 ENAYETTNEHALIK 382

[Close]

BLAST of CsGy2G019270 vs. Swiss-Prot
Match: sp|O23181|PLP3_ARATH (Patatin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLP3 PE=2 SV=2)

HSP 1 Score: 150.6 bits (379), Expect = 1.3e-35
Identity = 76/136 (55.88%), Postives = 103/136 (75.74%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL 60
           +D+ RFLVIS+GTG+ + + K+ A  A++WGL  W+   GSTPI+D + +A  DMVD+  
Sbjct: 272 LDFTRFLVISIGTGSIRNQEKYNAKMASKWGLMCWVFESGSTPILDCYSEAIHDMVDYQS 331

Query: 61  SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 120
           SVVFQAL  E  YLRI DD+L  ++ ++D +TEKN+EGLV+VGEALLKK VS+VNLE+G 
Sbjct: 332 SVVFQALRSEKNYLRIDDDSLKGDLGSVDISTEKNMEGLVEVGEALLKKRVSRVNLESGH 391

Query: 121 FQ-TSDSQTNEEALIR 136
           +Q  S++ TNEEAL R
Sbjct: 392 YQPISENVTNEEALKR 407

[Close]

BLAST of CsGy2G019270 vs. Swiss-Prot
Match: sp|O23179|PLP1_ARATH (Patatin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLP1 PE=1 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 1.3e-32
Identity = 68/136 (50.00%), Postives = 100/136 (73.53%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL 60
           + + RFLVIS+GTG+ K E K++A +AA+WG+  WL   GSTPI+D   ++S DM+ ++ 
Sbjct: 248 LGFDRFLVISIGTGSTKREEKYSAKKAAKWGIISWLYDDGSTPILDITMESSRDMIHYHS 307

Query: 61  SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 120
           SVVF+AL  EDKYLRI DDTL  +VST+D AT+ NLE L K+GE +L   V ++N++TG+
Sbjct: 308 SVVFKALQSEDKYLRIDDDTLEGDVSTMDLATKSNLENLQKIGEKMLTNRVMQMNIDTGV 367

Query: 121 FQ-TSDSQTNEEALIR 136
           ++  +++ TN+E L R
Sbjct: 368 YEPVAENITNDEQLKR 383

[Close]

BLAST of CsGy2G019270 vs. Swiss-Prot
Match: sp|O23180|PLP5_ARATH (Patatin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=PLP5 PE=1 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 7.3e-31
Identity = 64/136 (47.06%), Postives = 99/136 (72.79%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL 60
           + Y +FLVIS+GTG+ K E +++A +AA+WG+  WL   G+TPI+D  +++S D+V ++ 
Sbjct: 248 LGYDQFLVISIGTGSAKKEERYSAKKAAKWGIISWLYEDGTTPILDITFESSRDIVHYHS 307

Query: 61  SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 120
           SVVF+AL  EDKYLRI DDTL  + STLD +T+ NLE L+K+GE +L   V ++N++TG 
Sbjct: 308 SVVFKALQSEDKYLRIDDDTLEGDASTLDLSTKSNLENLIKLGEKMLTNRVMQMNIDTGT 367

Query: 121 FQ-TSDSQTNEEALIR 136
           ++  +++  N+E L R
Sbjct: 368 YEPAAENINNDEQLKR 383

[Close]

BLAST of CsGy2G019270 vs. Swiss-Prot
Match: sp|A2YW91|PLP2_ORYSI (Patatin-like protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=PLP2 PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.5e-28
Identity = 63/135 (46.67%), Postives = 91/135 (67.41%), Query Frame = 0


Query: 2   DYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNLS 61
           +Y +F+VIS+G G+   + K+ A  AA+WG+F WL  G S PIID F  AS+DMVD +L 
Sbjct: 254 EYGKFMVISIGCGS-NHDQKYKAKDAAKWGIFNWLIKGSSAPIIDMFTSASADMVDIHLG 313

Query: 62  VVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGIF 121
           V+F AL CE  YLRIQ D L+    ++D+ +++N++ LVK+GE LL K VS+V+LETG +
Sbjct: 314 VLFSALQCEKNYLRIQYDQLTGSAGSIDDCSKENMDNLVKIGEMLLDKNVSRVDLETGHY 373

Query: 122 -QTSDSQTNEEALIR 136
              +   TN + L +
Sbjct: 374 VDVAGEGTNRDQLAK 387

[Close]

BLAST of CsGy2G019270 vs. TrEMBL
Match: tr|A0A0A0LNH7|A0A0A0LNH7_CUCSA (Patatin OS=Cucumis sativus OX=3659 GN=Csa_2G360560 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.1e-68
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL 60
           MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL
Sbjct: 162 MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL 221

Query: 61  SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 120
           SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI
Sbjct: 222 SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 281

Query: 121 FQTSDSQTNEEALIR 136
           FQTSDSQTNEEALIR
Sbjct: 282 FQTSDSQTNEEALIR 296

[Close]

BLAST of CsGy2G019270 vs. TrEMBL
Match: tr|A0A1S3BBM5|A0A1S3BBM5_CUCME (Patatin OS=Cucumis melo OX=3656 GN=LOC103487911 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 5.6e-68
Identity = 133/135 (98.52%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL 60
           MDY+RFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGG+TPIIDAFYQASSDMVDFNL
Sbjct: 246 MDYKRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGTTPIIDAFYQASSDMVDFNL 305

Query: 61  SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 120
           SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI
Sbjct: 306 SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 365

Query: 121 FQTSDSQTNEEALIR 136
           FQTSDSQTNEEALIR
Sbjct: 366 FQTSDSQTNEEALIR 380

[Close]

BLAST of CsGy2G019270 vs. TrEMBL
Match: tr|A0A1S3BAB4|A0A1S3BAB4_CUCME (Patatin OS=Cucumis melo OX=3656 GN=LOC103487911 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 5.6e-68
Identity = 133/135 (98.52%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL 60
           MDY+RFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGG+TPIIDAFYQASSDMVDFNL
Sbjct: 245 MDYKRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGTTPIIDAFYQASSDMVDFNL 304

Query: 61  SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 120
           SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI
Sbjct: 305 SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 364

Query: 121 FQTSDSQTNEEALIR 136
           FQTSDSQTNEEALIR
Sbjct: 365 FQTSDSQTNEEALIR 379

[Close]

BLAST of CsGy2G019270 vs. TrEMBL
Match: tr|A0A0A0LKY1|A0A0A0LKY1_CUCSA (Patatin OS=Cucumis sativus OX=3659 GN=Csa_2G360570 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 8.9e-50
Identity = 100/137 (72.99%), Postives = 121/137 (88.32%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL 60
           MDYRRFLVISLGTGAPKAE ++TA+ AA+WG+  WLT GGSTPIID F QASSDMVDF+L
Sbjct: 150 MDYRRFLVISLGTGAPKAEKRYTAELAAEWGMLDWLTNGGSTPIIDVFSQASSDMVDFHL 209

Query: 61  SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 120
           SV+FQALHCED YLRIQDDTLS ++S++D AT+KNL  LVKVGE+LLKKPVS+VNL+TG+
Sbjct: 210 SVIFQALHCEDNYLRIQDDTLSGDLSSVDVATQKNLNDLVKVGESLLKKPVSRVNLQTGV 269

Query: 121 FQ--TSDSQTNEEALIR 136
           F+   S+S+TN++AL R
Sbjct: 270 FEDCPSNSETNDQALTR 286

[Close]

BLAST of CsGy2G019270 vs. TrEMBL
Match: tr|A0A1S3BAS1|A0A1S3BAS1_CUCME (Patatin OS=Cucumis melo OX=3656 GN=LOC103487912 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.7e-48
Identity = 99/137 (72.26%), Postives = 119/137 (86.86%), Query Frame = 0


Query: 1   MDYRRFLVISLGTGAPKAEMKFTADQAAQWGLFGWLTAGGSTPIIDAFYQASSDMVDFNL 60
           MDYRRFLVISLGTGAPKAE ++TA+ AA+WG+  WLT GGSTPIID F QASSDMVD +L
Sbjct: 245 MDYRRFLVISLGTGAPKAEKRYTAELAAEWGMLDWLTNGGSTPIIDVFSQASSDMVDLHL 304

Query: 61  SVVFQALHCEDKYLRIQDDTLSNEVSTLDEATEKNLEGLVKVGEALLKKPVSKVNLETGI 120
           SV+FQALHCE+ YLRIQDDTLS ++S++D ATEKNL  LVKVGE+LLKK VS+VNL+TGI
Sbjct: 305 SVIFQALHCEENYLRIQDDTLSGDLSSVDVATEKNLNDLVKVGESLLKKQVSRVNLQTGI 364

Query: 121 FQ--TSDSQTNEEALIR 136
           F+   S+S+TN++AL R
Sbjct: 365 FEDCPSNSETNDQALTR 381

The following BLAST results are available for this feature:

BLAST of CsGy2G019270 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN62539.1	1.7e-68	100.00	hypothetical protein Csa_2G360560 [Cucumis sativus]	[more]
XP_004152795.2	1.7e-68	100.00	PREDICTED: patatin-like protein 2 [Cucumis sativus]	[more]
XP_008444641.1	8.4e-68	98.52	PREDICTED: patatin-like protein 2 isoform X1 [Cucumis melo]	[more]
XP_008444642.1	8.4e-68	98.52	PREDICTED: patatin-like protein 2 isoform X2 [Cucumis melo]	[more]
XP_022996967.1	6.0e-50	73.05	patatin-like protein 2 isoform X2 [Cucurbita maxima]	[more]

BLAST of CsGy2G019270 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G26560.1	6.9e-40	60.45	phospholipase A 2A	[more]
AT4G37050.1	7.1e-37	55.88	PATATIN-like protein 4	[more]
AT4G37070.2	7.4e-34	50.00	Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein	[more]
AT4G37060.2	4.1e-32	47.06	PATATIN-like protein 5	[more]
AT5G43590.1	5.9e-23	39.10	Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein	[more]

BLAST of CsGy2G019270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O48723\|PLP2_ARATH	1.2e-38	60.45	Patatin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLP2 PE=1 SV=1	[more]
sp\|O23181\|PLP3_ARATH	1.3e-35	55.88	Patatin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLP3 PE=2 SV=2	[more]
sp\|O23179\|PLP1_ARATH	1.3e-32	50.00	Patatin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLP1 PE=1 SV=2	[more]
sp\|O23180\|PLP5_ARATH	7.3e-31	47.06	Patatin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=PLP5 PE=1 SV=2	[more]
sp\|A2YW91\|PLP2_ORYSI	1.5e-28	46.67	Patatin-like protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=PLP2 PE=3 SV=1	[more]

BLAST of CsGy2G019270 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LNH7\|A0A0A0LNH7_CUCSA	1.1e-68	100.00	Patatin OS=Cucumis sativus OX=3659 GN=Csa_2G360560 PE=3 SV=1	[more]
tr\|A0A1S3BBM5\|A0A1S3BBM5_CUCME	5.6e-68	98.52	Patatin OS=Cucumis melo OX=3656 GN=LOC103487911 PE=3 SV=1	[more]
tr\|A0A1S3BAB4\|A0A1S3BAB4_CUCME	5.6e-68	98.52	Patatin OS=Cucumis melo OX=3656 GN=LOC103487911 PE=3 SV=1	[more]
tr\|A0A0A0LKY1\|A0A0A0LKY1_CUCSA	8.9e-50	72.99	Patatin OS=Cucumis sativus OX=3659 GN=Csa_2G360570 PE=3 SV=1	[more]
tr\|A0A1S3BAS1\|A0A1S3BAS1_CUCME	3.7e-48	72.26	Patatin OS=Cucumis melo OX=3656 GN=LOC103487912 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR016035	Acyl_Trfase/lysoPLipase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016042	lipid catabolic process
biological_process	GO:0008152	metabolic process
biological_process	GO:0006629	lipid metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G019270.1	CsGy2G019270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.1090.10		coord: 1..137 e-value: 1.6E-39 score: 137.9
None	No IPR available	PANTHER	PTHR32176:SF6	PATATIN-LIKE PROTEIN 1-RELATED	coord: 1..135
None	No IPR available	PANTHER	PTHR32176	FAMILY NOT NAMED	coord: 1..135
IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase	SUPERFAMILY	SSF52151	FabD/lysophospholipase-like	coord: 2..120

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G019270	Cp4.1LG11g01810	Cucurbita pepo (Zucchini)	cgybcpeB161
CsGy2G019270	MELO3C010889.2	Melon (DHL92) v3.6.1	cgybmedB101
CsGy2G019270	CsaV3_2G028100	Cucumber (Chinese Long) v3	cgybcucB065
CsGy2G019270	Cla97C08G159230	Watermelon (97103) v2	cgybwmbB156
CsGy2G019270	Bhi04G000287	Wax gourd	cgybwgoB157
CsGy2G019270	Carg25835	Silver-seed gourd	carcgybB0286
CsGy2G019270	Carg11836	Silver-seed gourd	carcgybB0195

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G019270	Watermelon (97103) v2	cgybwmbB127
CsGy2G019270	Wax gourd	cgybwgoB190
CsGy2G019270	Cucumber (Gy14) v2	cgybcgybB056
CsGy2G019270	Cucumber (Gy14) v2	cgybcgybB073
CsGy2G019270	Cucurbita maxima (Rimu)	cgybcmaB147
CsGy2G019270	Cucurbita maxima (Rimu)	cgybcmaB179
CsGy2G019270	Cucurbita maxima (Rimu)	cgybcmaB210
CsGy2G019270	Cucurbita maxima (Rimu)	cgybcmaB199
CsGy2G019270	Cucurbita maxima (Rimu)	cgybcmaB250
CsGy2G019270	Cucurbita moschata (Rifu)	cgybcmoB138
CsGy2G019270	Cucurbita moschata (Rifu)	cgybcmoB156
CsGy2G019270	Cucurbita moschata (Rifu)	cgybcmoB171
CsGy2G019270	Cucurbita moschata (Rifu)	cgybcmoB193
CsGy2G019270	Cucurbita moschata (Rifu)	cgybcmoB238
CsGy2G019270	Cucurbita pepo (Zucchini)	cgybcpeB186
CsGy2G019270	Cucurbita pepo (Zucchini)	cgybcpeB224
CsGy2G019270	Cucurbita pepo (Zucchini)	cgybcpeB237
CsGy2G019270	Cucurbita pepo (Zucchini)	cgybcpeB254
CsGy2G019270	Cucurbita pepo (Zucchini)	cgybcpeB270
CsGy2G019270	Cucumber (Chinese Long) v2	cgybcuB057
CsGy2G019270	Cucumber (Chinese Long) v2	cgybcuB073
CsGy2G019270	Cucumber (Chinese Long) v2	cgybcuB087
CsGy2G019270	Bottle gourd (USVL1VR-Ls)	cgyblsiB104
CsGy2G019270	Bottle gourd (USVL1VR-Ls)	cgyblsiB129
CsGy2G019270	Melon (DHL92) v3.5.1	cgybmeB102
CsGy2G019270	Melon (DHL92) v3.5.1	cgybmeB128
CsGy2G019270	Melon (DHL92) v3.6.1	cgybmedB127
CsGy2G019270	Watermelon (Charleston Gray)	cgybwcgB125
CsGy2G019270	Watermelon (Charleston Gray)	cgybwcgB131
CsGy2G019270	Watermelon (Charleston Gray)	cgybwcgB155
CsGy2G019270	Watermelon (97103) v1	cgybwmB108
CsGy2G019270	Watermelon (97103) v1	cgybwmB119
CsGy2G019270	Watermelon (97103) v1	cgybwmB142
CsGy2G019270	Wild cucumber (PI 183967)	cgybcpiB057
CsGy2G019270	Wild cucumber (PI 183967)	cgybcpiB074
CsGy2G019270	Wild cucumber (PI 183967)	cgybcpiB088
CsGy2G019270	Silver-seed gourd	carcgybB0110
CsGy2G019270	Silver-seed gourd	carcgybB0766
CsGy2G019270	Cucumber (Chinese Long) v3	cgybcucB081