CsGy2G017830 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATATTTTTAACCATCCCATATCTATCTGCACCCTCGATTTACTTTTATCATGGAAATATGATAATGAAATTAAATATATAGTTTAAATTTGATGTTTACCAAGCAATTTTATGACTTAAGCTTAAGAATTATATAAAGAGGGAATAAAAGATATTGTTTCAACCACAATTATCGAAATGGGCCTCTTCAGACGAAATTTGGCCCAAAACAAAATCTCTATGACTCGGAACCCTACCGGTTGTGTAGTCATTCGTTCCGAAATCGCCATAGAGAAGCTCTGTTTCTCTGCTCGGAGCTCAAATCTTAATTCCTAGCTTGTCGTCGGAATCCATTCCTCAACCATGGAGTTTTCTCAGGATGATTTTGATCGGCTTCTTCTCTTCGAGCACACTCGAAAAACCGCCGAAGCTAACTACGCCGCCAACCCACTTGATGCCGATGTATTTCCTTCTTTCTTTCTTTCATCCCTCATCTATTATCTCGTTTCGTGTTTTTTATCATATCTTTATCTGCTTTTACTTATCGTTGAACTTGATATCCATCACCAATTTTCGTTGTGTGTATGTGCTGAATTACTGTTTTCCGGGAAGGGTAACTTAAGCTGTTGGAAATGGTATCCTGTCGTCTTATCGTTCCTTTTATGTGTTTTTTTTTTTCCAGAATTTGACCAAGTGGGGAGGAGCATTGCTTGAGTTATCTCAATTTCAGAGTGTTTCTGATTCCAAAAATATGATCAAAGGTATTTTCATTGCCCTACTAAATGTTTAAGAATATGGATTGGCTGTAATATTCAATGATGAACTAACGAATACGAACGAGAACAAACTCAATTTGATATTGCAGACGCTGTTGGGAAGCTGGAGGAAGCTTTGACTATTAATCCCACGAAGCATGATGCTCTTTGGTGTATTGGAAATGCTCACACTTCACAAGCTTTTCTGACTCCCGATAGGGATGAGGCCCAAGTCTATTTCGATAAAGCACAGGAGTGTTTTCAGAAGGCACTAGATGAGGTGATATATGTGGATTTGATTGAATTAGTCTGACTTTTGAATTCATTAAACATTAATTGATTCTAAATAGTTGAGATTTTTTTCCTCAGGATCCTGGTAATGAACTATATCACAAGTCCCTGGAAGTCGCTGCAAAGGTGAGGATATAATATAACTCTGTCATTTGATTTTCAGTTTGCATTGAATTTCTTGGAAGTGATTTACTTCAGAGATAAAATCTACAGTGCAGCGCCTTTTGGGTTCTCTATACTTTGTAGGTTCGGTAGTTGGGGCTCTAGGACAGTGTGGTATTAGTAACTATGGAGTCCATTTCTTCGAGCAATTCTGATTCTTACTGTTAGTTTTACTTGGTTTTAATCTTTGGGGTTTTTAAGCCACATGCATAATAGAGTTTAGATTGGATTGGGGATGACCCATTAAAGCGGGGTAGGTTGTGCTTATGTGGTAAAATCCTCTTCCTCTATCCACCTAAATTTTCATGTCATTGTTGATAGAGTCTAAGAAAAATTTCGATCATCATAGTGCCATCTTAACTTTCTGGAAAGTAATTTAATCAATTTGTCTAGGAAGTTCAGAATATTCTTAAGCATTGTCACTGTTAATATAGTGTATTGGTATAATGATAGACCTCCGATACTATATCAGTATAGTAGGAGAGGGAAGAAGGGTAGTGGCACGGCATGTGTGTAGAGTGACGTGTGAGTTAGGTTAGTATAAATAAAGAAAAAATGTTGGGAGGGAAAAGGGAGTTAGAAACTTTGAAGGAGTAGATTTCTGTTCTTCCTTGAGAGATAGGATAACAGGAGAGGATTTACAGCTTTAGTGTGTGTAACCTAGATTCAGTTTGAATCTATTATCAATAAAAGTAGAATTCTCTTAGTTTCTGGATTCCATCATATAATTATATATATTATTCGAAAGATCAGTGGGGATATAATTATGTTCAATACAAGCGTGTGTTTTTCTGTCATGTTTCCTTCAAATATTTCTGCTCACTGTCTTTGCAGAGAAGGTTGAAAAACTTTAGGGTCAATGCTTTTGTTACTATATTTTGGGTGCTCTGGTTGGTTAGATATGGGTTAATGTTTGATGAAAATTTGACTAGTATTGGAAGATACTGTTGAATCCTTTATTTTTCTCTTTTGGGTTCTAGATGGTGATGGTGCTCCACAGAAAAAAAATGACATTGAATGGAGATGAGGAATGGGAATGAGACATAGATATTAATCCCATATAGGATGGAGGAGTTGTCATATCTTATCTTATGTTTTACTGAATTAATGACTGATAAGTTCCTACAGGGATGTAGAAACTGAAAGTATTGTCATTATCTGATGTTATGTTGCCTCAGGCGCCGGGGTTCCATTCGGAGATCCACAAGCATGGTTCCAGTCAACAGAGTGCAGGGTCTTCAGGCGGGGGAGCTACTGCTGCTTCAAACCCAAAGGTTACTAGTCATGGAGCTTTTTCTCTTCTTTTGGCAAAGCATATGGTCCATCTGCTAATGAAGTTTGTTTGTTGTGGTTCAATTCATAAACACCAGAGTTCCAAGAAGAAGAGCAGCGATCTAAAGTATGACATATTTGGATGGGTCATCCTTGCTGTTGGAATCGTTGCATGGGTTGGAATGACAAAATCTCATGTTCCACCTCCTCCTTCGAGGTGAAACTTTTAGATTCTGGAACTGCAAACCTACTCTTCTGAAAAGTCTCTTTGAGGGTATGCCCTGCCCCTCATGGAAGTGCCCAACAGGCTACAATGAAAAAGAATCTCTTCATTGTGATGCAGAATACCTGCCTTCTTCCTGGTATTTAACTCGTAAGTGTTTCTCATTTCTAGTGTACCTGGTTTAGCTTTGAGATCATTTTTGTTTAGTTGATAATTAGCCAAAATCTCAAATCTGCTGTAGCATAACAGTGGTTTTTTTTTTTTATATCAAAGATATAAAGTATTTGAACTTGTAGTTGGTTTGGTTGAATGATATTAATCATTCCATTTTTAGACTTTTGCCTTTTGGTATTCCTGTGGTAACAAGCAGCCTGATTATATGAAGAATTTCAACTGGGAGAACGTTTATTCGTTTTTGTAATTGGTTGAGTAGTGTTTCTATGTCGATTCATTCACTTTTTAGCCTTTTGCTTTTTGGTATTCCTTTGGTAACAAGCATCCTTATCATATGAAGAATTTCAGCTGTGAGAATGTTCACTGGTTTTTGTAGTTTTAGAACTTGCATTTTGATGGCTAGATTCGGTTGGTTTTAGTCTGAACTTGATGTTAAAAGACCATGAACTGAACGCATGTATTCACCTAAATTTATAGTGTCGAAATTGAAATCTACCCAATCTTAGTAGCATCTTTGTCCCAAAGAATAGAGAAAGTTATTGTAATGGTTAACCTTTTGAGAAAGTTTGTGGAAATTCCATTATAAACTTGATGTATCAGATCAGTTGTTTCAGTGTTAATGATGATTTAAAAAAGAACAGAACTTTCTCATGTCAGGTAGGCATCTTAAATTTTTTATGTAAACAACTATGGAAAGAAAGAATAAAACTCATTTTAGTATAGACATTTCATGAATAGCATAATAAAACGATCCGTGAATGTGTAGACTTGAATTTTGGAAGGTATACTTAGTTGGCCCATTTCCACTTTTTTGGTAGAGGAATAATGTAACCAAATCAGTTATATTCAAGTTAGGAATAATTATTAGCTCTGGAAATTGATTTAAAATATCAGAGGTTGAAGAAATTTTCAATCTCTTTCAAGATATTAGTAGCAATATTATATAATTGTGTATTTTAGGGTTTTGGAATAAGTCGTAAAAAGATGAATTTTTATATTTGAATATTTTATTATAGGTTTGTTCCTAAGTGGTGTAATTTTTAATTTTAATTTTAATTTTCAAAACTTGGAAGATTTTATGTAGACTTTCCAATTTTTGTACAAAATAAGTTCGGACGAGGGGTGCAAAATTGATTACACTTAAAGTTTAGAAAAATAATCCGTTGATGTTTACTTATTCTACGTTCTTATTTGTACAATTGGTACTTCAAACTTGAAATGATTATAAAGAAATTAACGATACTTCTTTGTCTTTTGAGTTGTTTTGTCGGGTTCAATACCTCTATCCGGACCCGATGAAAAAAATGGGATCACTTCTTATGTACTCGTTGAGAATGATTCTCATCTAGTTCATGGCCTATTAGAAGTAGAAGGCGCTCTGTTTGGATCCTCATGGACAGAAAATGATTTGTAATTAATTTTGATAAGGGTAATTGCAATAGATGACAATTTGAAGAATAATAATTAAAAATATAACAACATTTTAAAAAAATACAAATATAGCAAAACTATCATCGATAGACTTGTATCAATGATAGACTCGTATGATCTATTGATGATAGACCAATTTTTACAACATGATCTATCAGTGATAAACTTTAAATTTTGCTATAACTGCAATTTTTTAAAAATGTTGTTATATACTCAACTATTTTGAATTTAATTGCCAATTTGTAACTATCTCATTTGATAATGATCGAGTGACATTGCTTCTTCGGCCCGAACCCAGGAATCCCTTAGATATGATACAAAATGGATCTTCTTCTATCGTTGATCAGATATTTCTCTATCAAAAATACGAATCGAAGTTTGAAGAAGTGAAAGCTGCAACAGATATAGGATAA ATATTTTTAACCATCCCATATCTATCTGCACCCTCGATTTACTTTTATCATGGAAATATGATAATGAAATTAAATATATAGTTTAAATTTGATGTTTACCAAGCAATTTTATGACTTAAGCTTAAGAATTATATAAAGAGGGAATAAAAGATATTGTTTCAACCACAATTATCGAAATGGGCCTCTTCAGACGAAATTTGGCCCAAAACAAAATCTCTATGACTCGGAACCCTACCGGTTGTGTAGTCATTCGTTCCGAAATCGCCATAGAGAAGCTCTGTTTCTCTGCTCGGAGCTCAAATCTTAATTCCTAGCTTGTCGTCGGAATCCATTCCTCAACCATGGAGTTTTCTCAGGATGATTTTGATCGGCTTCTTCTCTTCGAGCACACTCGAAAAACCGCCGAAGCTAACTACGCCGCCAACCCACTTGATGCCGATAATTTGACCAAGTGGGGAGGAGCATTGCTTGAGTTATCTCAATTTCAGAGTGTTTCTGATTCCAAAAATATGATCAAAGACGCTGTTGGGAAGCTGGAGGAAGCTTTGACTATTAATCCCACGAAGCATGATGCTCTTTGGTGTATTGGAAATGCTCACACTTCACAAGCTTTTCTGACTCCCGATAGGGATGAGGCCCAAGTCTATTTCGATAAAGCACAGGAGTGTTTTCAGAAGGCACTAGATGAGGATCCTGGTAATGAACTATATCACAAGTCCCTGGAAGTCGCTGCAAAGGCGCCGGGGTTCCATTCGGAGATCCACAAGCATGGTTCCAGTCAACAGAGTGCAGGGTCTTCAGGCGGGGGAGCTACTGCTGCTTCAAACCCAAAGAGTTCCAAGAAGAAGAGCAGCGATCTAAAGTATGACATATTTGGATGGGTCATCCTTGCTGTTGGAATCGTTGCATGGGTTGGAATGACAAAATCTCATGTTCCACCTCCTCCTTCGAGAATACCTGCCTTCTTCCTGATATTTCTCTATCAAAAATACGAATCGAAGTTTGAAGAAGTGAAAGCTGCAACAGATATAGGATAA ATGGAGTTTTCTCAGGATGATTTTGATCGGCTTCTTCTCTTCGAGCACACTCGAAAAACCGCCGAAGCTAACTACGCCGCCAACCCACTTGATGCCGATAATTTGACCAAGTGGGGAGGAGCATTGCTTGAGTTATCTCAATTTCAGAGTGTTTCTGATTCCAAAAATATGATCAAAGACGCTGTTGGGAAGCTGGAGGAAGCTTTGACTATTAATCCCACGAAGCATGATGCTCTTTGGTGTATTGGAAATGCTCACACTTCACAAGCTTTTCTGACTCCCGATAGGGATGAGGCCCAAGTCTATTTCGATAAAGCACAGGAGTGTTTTCAGAAGGCACTAGATGAGGATCCTGGTAATGAACTATATCACAAGTCCCTGGAAGTCGCTGCAAAGGCGCCGGGGTTCCATTCGGAGATCCACAAGCATGGTTCCAGTCAACAGAGTGCAGGGTCTTCAGGCGGGGGAGCTACTGCTGCTTCAAACCCAAAGAGTTCCAAGAAGAAGAGCAGCGATCTAAAGTATGACATATTTGGATGGGTCATCCTTGCTGTTGGAATCGTTGCATGGGTTGGAATGACAAAATCTCATGTTCCACCTCCTCCTTCGAGAATACCTGCCTTCTTCCTGATATTTCTCTATCAAAAATACGAATCGAAGTTTGAAGAAGTGAAAGCTGCAACAGATATAGGATAA MEFSQDDFDRLLLFEHTRKTAEANYAANPLDADNLTKWGGALLELSQFQSVSDSKNMIKDAVGKLEEALTINPTKHDALWCIGNAHTSQAFLTPDRDEAQVYFDKAQECFQKALDEDPGNELYHKSLEVAAKAPGFHSEIHKHGSSQQSAGSSGGGATAASNPKSSKKKSSDLKYDIFGWVILAVGIVAWVGMTKSHVPPPPSRIPAFFLIFLYQKYESKFEEVKAATDIG
BLAST of CsGy2G017830 vs. NCBI nr
Match: XP_004142933.1 (PREDICTED: mitochondrial import receptor subunit TOM20-like [Cucumis sativus] >KGN62378.1 hypothetical protein Csa_2G351590 [Cucumis sativus]) HSP 1 Score: 356.7 bits (914), Expect = 6.0e-95 Identity = 201/204 (98.53%), Postives = 201/204 (98.53%), Query Frame = 0
BLAST of CsGy2G017830 vs. NCBI nr
Match: XP_008444452.1 (PREDICTED: mitochondrial import receptor subunit TOM20-like [Cucumis melo]) HSP 1 Score: 351.3 bits (900), Expect = 2.5e-93 Identity = 198/204 (97.06%), Postives = 200/204 (98.04%), Query Frame = 0
BLAST of CsGy2G017830 vs. NCBI nr
Match: XP_022132248.1 (mitochondrial import receptor subunit TOM20-like [Momordica charantia]) HSP 1 Score: 315.1 bits (806), Expect = 2.0e-82 Identity = 152/204 (74.51%), Postives = 167/204 (81.86%), Query Frame = 0
BLAST of CsGy2G017830 vs. NCBI nr
Match: XP_022951095.1 (mitochondrial import receptor subunit TOM20-like [Cucurbita moschata]) HSP 1 Score: 302.4 bits (773), Expect = 1.3e-78 Identity = 173/208 (83.17%), Postives = 184/208 (88.46%), Query Frame = 0
BLAST of CsGy2G017830 vs. NCBI nr
Match: XP_023002768.1 (mitochondrial import receptor subunit TOM20-like [Cucurbita maxima]) HSP 1 Score: 298.1 bits (762), Expect = 2.5e-77 Identity = 173/208 (83.17%), Postives = 184/208 (88.46%), Query Frame = 0
BLAST of CsGy2G017830 vs. TAIR10
Match: AT1G27390.1 (translocase outer membrane 20-2) HSP 1 Score: 215.3 bits (547), Expect = 3.9e-56 Identity = 133/210 (63.33%), Postives = 160/210 (76.19%), Query Frame = 0
BLAST of CsGy2G017830 vs. TAIR10
Match: AT3G27080.1 (translocase of outer membrane 20 kDa subunit 3) HSP 1 Score: 208.4 bits (529), Expect = 4.8e-54 Identity = 104/201 (51.74%), Postives = 132/201 (65.67%), Query Frame = 0
BLAST of CsGy2G017830 vs. TAIR10
Match: AT5G40930.1 (translocase of outer membrane 20-4) HSP 1 Score: 177.2 bits (448), Expect = 1.2e-44 Identity = 95/195 (48.72%), Postives = 121/195 (62.05%), Query Frame = 0
BLAST of CsGy2G017830 vs. TAIR10
Match: AT3G27070.2 (translocase outer membrane 20-1) HSP 1 Score: 107.5 bits (267), Expect = 1.2e-23 Identity = 57/142 (40.14%), Postives = 81/142 (57.04%), Query Frame = 0
BLAST of CsGy2G017830 vs. Swiss-Prot
Match: sp|P92792|TOM20_SOLTU (Mitochondrial import receptor subunit TOM20 OS=Solanum tuberosum OX=4113 GN=TOM20 PE=1 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 3.3e-68 Identity = 126/194 (64.95%), Postives = 141/194 (72.68%), Query Frame = 0
BLAST of CsGy2G017830 vs. Swiss-Prot
Match: sp|P82873|TO202_ARATH (Mitochondrial import receptor subunit TOM20-2 OS=Arabidopsis thaliana OX=3702 GN=TOM20-2 PE=1 SV=2) HSP 1 Score: 215.3 bits (547), Expect = 7.1e-55 Identity = 133/210 (63.33%), Postives = 160/210 (76.19%), Query Frame = 0
BLAST of CsGy2G017830 vs. Swiss-Prot
Match: sp|P82874|TO203_ARATH (Mitochondrial import receptor subunit TOM20-3 OS=Arabidopsis thaliana OX=3702 GN=TOM20-3 PE=1 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 8.6e-53 Identity = 104/201 (51.74%), Postives = 132/201 (65.67%), Query Frame = 0
BLAST of CsGy2G017830 vs. Swiss-Prot
Match: sp|A2WYG9|TOM20_ORYSI (Probable mitochondrial import receptor subunit TOM20 OS=Oryza sativa subsp. indica OX=39946 GN=TOM20 PE=2 SV=2) HSP 1 Score: 186.4 bits (472), Expect = 3.5e-46 Identity = 109/201 (54.23%), Postives = 140/201 (69.65%), Query Frame = 0
BLAST of CsGy2G017830 vs. Swiss-Prot
Match: sp|Q5JJI4|TOM20_ORYSJ (Probable mitochondrial import receptor subunit TOM20 OS=Oryza sativa subsp. japonica OX=39947 GN=TOM20 PE=2 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 3.5e-46 Identity = 112/201 (55.72%), Postives = 143/201 (71.14%), Query Frame = 0
BLAST of CsGy2G017830 vs. TrEMBL
Match: tr|A0A0A0LKR5|A0A0A0LKR5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351590 PE=4 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 4.0e-95 Identity = 201/204 (98.53%), Postives = 201/204 (98.53%), Query Frame = 0
BLAST of CsGy2G017830 vs. TrEMBL
Match: tr|A0A1S3BAF4|A0A1S3BAF4_CUCME (mitochondrial import receptor subunit TOM20-like OS=Cucumis melo OX=3656 GN=LOC103487773 PE=4 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 1.7e-93 Identity = 198/204 (97.06%), Postives = 200/204 (98.04%), Query Frame = 0
BLAST of CsGy2G017830 vs. TrEMBL
Match: tr|A0A1U7ZD90|A0A1U7ZD90_NELNU (mitochondrial import receptor subunit TOM20-like OS=Nelumbo nucifera OX=4432 GN=LOC104592890 PE=4 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 6.4e-77 Identity = 161/204 (78.92%), Postives = 176/204 (86.27%), Query Frame = 0
BLAST of CsGy2G017830 vs. TrEMBL
Match: tr|M5XZE8|M5XZE8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G226600 PE=4 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 3.2e-76 Identity = 146/204 (71.57%), Postives = 156/204 (76.47%), Query Frame = 0
BLAST of CsGy2G017830 vs. TrEMBL
Match: tr|A0A2I4FYM0|A0A2I4FYM0_9ROSI (mitochondrial import receptor subunit TOM20-like OS=Juglans regia OX=51240 GN=LOC109003170 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 7.1e-76 Identity = 163/204 (79.90%), Postives = 175/204 (85.78%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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