CsGy2G016980 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G016980
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr2 : 27240978 .. 27243369 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAAGCCTCTAGCTCTAATGTATGTTGCAATTCGTTTATATGTTCGTGAAGGAAGGAAATATTTCTTGTTAATCATCAATTTCGGTGGTTTGCTCCACAATAGTATATTCTAAACTTGTCTGTTTCATTTAGAATGACTGCCTCTAATGTGGAGTCCCCGGAATGAGACAGGAAAGCAGTGGAAGTAATGGAAAAGGCATCATAAATTCACAAGAGAATCAGCAAGGCTTCCGGGAAAGTGGCGATCATATGAATGTATTTGTTTAATTAATTGCATTGCGTCTCTTTGACGTCATGCACATTCATCATTTGAAATGAAGTGTGTACATTTGAAGTCCTAATATCTCATGTCACTTACCTCTATCTCTTTTTTTTCCCTATTTCAAAATACCTCTGTTCTCCAACACCATAAAGCATTCAAATGATTGGACGGCTAGAGGCCTTCTGCTGACCCACGTATTGCCTGCCCTATTAGTTTAATCTTTCTTTTGGCTATGATCATGTTTCTACTCGAAACCAGGGCACTTGTAGTTTCGTCTTTATATTTTTGGTCGACCTGATGTTTGTAAATTCTATTAGTAGTAGTGTCTATGGGATTCTTAACTAGAAGTTGGGAGGTGTTATGAAATGTTTAATACCAAGCCCTGATTGGCTTACTCTGATCTCCTTCCACGAATCTCACGGCTGTGGAGGATGAGCTAAATTACTTGTATGCCATGCTCTATTCTTTCAAAATGAAAGCAAAGGTCGTGCGGCCATGATTGAAGTTCCCACTATCCCATCCACTTTGGGTGCTCTTCTCTTCCCTTTTGTTATTGGTTACATGGTTGGTTGGCAACACTTTAATAAGTGGAGTTATCTTTTCCTCGATCAAATTGATTTTACTAATGTGAATGTGAACATCAATCCAAAGAGATTTTATAAATTCTCTACTCAGAAGAGGATATTTGTGTAAGACTGTTGGACGTATTGTACATCGACAAATAATTCTCCATCCGGGCAAGCTGTAATGAATGCTATGTCAAAACGAAAAGCTCAAGCATGTGCAAGAATGCTTTGCTAAAGTTTTTTTTGTGGTAACAAAGTTAAAGCTACCCCCAACAATCATAAGCTGGACATGCTTCTGAATGCAGGAAACTTGATTTGAAAGCTCTCGGCGGGTTCTACTATTGCACTCATTCACATAATAAATACATTATCTTACTCAGCTGTCCGCTTTATTTACTTCATCTGTAAAGAAACACCACGTTTTTCAGTTCAATATGATCATTCTACCAATAAACAACATGCTAAACACAAAAGTAATCCAAAGACTCCAAGTTGATCCACAAACTTTTTGTTTGTCATTTTACCAATTGGCATATGCAAAATGCCTTTTAAATTTTCTTATCAGTGTCATATTATTATAAAATAGAATCAAATATGGTGAAACGTTATTATCAACTGGGGAACAACTTTTTTGAAAATGCACTTCTTTTGATCCATTGGAAAGCAAAGGAAAAATTGGCTGGGATCCAAAGACGGAAACTTTATGAAGAATTCAACGACTCCCACATGATGAATCATTAAATCCAATGATAGTTAGCGACCAGTTTTATGAAAAAGCAGATCATTATCATCAGCACACTGTATATTTATTTCTTTCTTTCTTTTCCTACTTTTTTTTATTCAATAATAATAATAAGTTTTTATTTAATAATAATAATAAAAACATTTTAAAAATAACAAAAGTTTTGGAGTATCAGTGTGATATCACTAGCTATCAATGCTGAAGGATATCACTATACAACAAATGTTTATTATTGATAAAATGTAAAATTTTACTATAACTTATAAATATTTTGTCAAATTTGTTATTTTTGACAATTATTCTAATAATAATAATAGTAATTGAGAAGCAAATAAATGAAAATGAAAGGATTTATTTAAACAATCACTCTGACTGATCAGACTGGGAAATTTTTTTTGAAGAGAGGCGTTGTTATTAGAGACTTTTAGTTGGTGGAATAATGTGAAAAAACAGGATCGTTCAAATTTTCATTGGGGTTAAAGTTCATTAGTTTACACTCGAAAATGGGAGAGGGTGTGGCATGTGAGATCACGTGCATTATGTTATTGTGCCAATTCAGATAATTATAATTTGACTTTGGTCTTTTTTCTTATTCAGATAATTATAAATGTAGAGTTTTTGAAAAGGGGAATCAAATCAAATTCAACACGTTGTTTCAATTAATTTAATGTAGTTAAATAGCTATTGTTCCTTCCCTAGGAAATGAAAGCATTCAAAGTAGTTTTAAGAAATTAATTGAGACAACATCTAACTTTTTCAACTGGGTCACAACCCAAGCTCTGCATCCATCATTTCATGTTTATGGCAATGGCATTTAA

mRNA sequence

ATGGCTAAGCCTCTAGCTCTAATGTATGTTGCAATTCGTTTATATGTTCGTGAAGGAAGGAAATATTTCTTGTTAATCATCAATTTCGGTGGTTTGCTCCACAATATCCCCGGAATGAGACAGGAAAGCAGTGGAAGTAATGGAAAAGGCATCATAAATTCACAAGAGAATCAGCAAGGCTTCCGGGAAAGTGGCGATCATATGAATATAATTATAAATGTAGAGTTTTTGAAAAGGGGAATCAAATCAAATTCAACACCTATTGTTCCTTCCCTAGGAAATGAAAGCATTCAAAGTAGTTTTAAGAAATTAATTGAGACAACATCTAACTTTTTCAACTGGGTCACAACCCAAGCTCTGCATCCATCATTTCATGTTTATGGCAATGGCATTTAA

Coding sequence (CDS)

ATGGCTAAGCCTCTAGCTCTAATGTATGTTGCAATTCGTTTATATGTTCGTGAAGGAAGGAAATATTTCTTGTTAATCATCAATTTCGGTGGTTTGCTCCACAATATCCCCGGAATGAGACAGGAAAGCAGTGGAAGTAATGGAAAAGGCATCATAAATTCACAAGAGAATCAGCAAGGCTTCCGGGAAAGTGGCGATCATATGAATATAATTATAAATGTAGAGTTTTTGAAAAGGGGAATCAAATCAAATTCAACACCTATTGTTCCTTCCCTAGGAAATGAAAGCATTCAAAGTAGTTTTAAGAAATTAATTGAGACAACATCTAACTTTTTCAACTGGGTCACAACCCAAGCTCTGCATCCATCATTTCATGTTTATGGCAATGGCATTTAA

Protein sequence

MAKPLALMYVAIRLYVREGRKYFLLIINFGGLLHNIPGMRQESSGSNGKGIINSQENQQGFRESGDHMNIIINVEFLKRGIKSNSTPIVPSLGNESIQSSFKKLIETTSNFFNWVTTQALHPSFHVYGNGI
Homology
[Close]
BLAST of CsGy2G016980 vs. NCBI nr
Match: KGN62286.1 (hypothetical protein Csa_2G348240 [Cucumis sativus])

HSP 1 Score: 64.3 bits (155), Expect = 3.5e-07
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 39 MRQESSGSNGKGIINSQENQQGFRESGDHMN 70
          MRQESSGSNGKGIINSQENQQGFRESGDHMN
Sbjct: 1  MRQESSGSNGKGIINSQENQQGFRESGDHMN 31

[Close]
BLAST of CsGy2G016980 vs. TrEMBL
Match: tr|A0A0A0LQK1|A0A0A0LQK1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348240 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.3e-07
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 39 MRQESSGSNGKGIINSQENQQGFRESGDHMN 70
          MRQESSGSNGKGIINSQENQQGFRESGDHMN
Sbjct: 1  MRQESSGSNGKGIINSQENQQGFRESGDHMN 31

The following BLAST results are available for this feature:
BLAST of CsGy2G016980 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62286.13.5e-07100.00hypothetical protein Csa_2G348240 [Cucumis sativus][more]
BLAST of CsGy2G016980 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy2G016980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy2G016980 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LQK1|A0A0A0LQK1_CUCSA2.3e-07100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348240 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G016980.1CsGy2G016980.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy2G016980CsaV3_2G024600Cucumber (Chinese Long) v3cgybcucB065
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G016980Wild cucumber (PI 183967)cgybcpiB057
CsGy2G016980Silver-seed gourdcarcgybB0506
CsGy2G016980Silver-seed gourdcarcgybB0622
CsGy2G016980Watermelon (97103) v2cgybwmbB156
CsGy2G016980Wax gourdcgybwgoB150
CsGy2G016980Cucurbita maxima (Rimu)cgybcmaB170
CsGy2G016980Cucurbita maxima (Rimu)cgybcmaB250
CsGy2G016980Cucurbita moschata (Rifu)cgybcmoB162
CsGy2G016980Cucurbita moschata (Rifu)cgybcmoB238
CsGy2G016980Cucurbita pepo (Zucchini)cgybcpeB161
CsGy2G016980Cucurbita pepo (Zucchini)cgybcpeB263
CsGy2G016980Cucumber (Chinese Long) v2cgybcuB057
CsGy2G016980Melon (DHL92) v3.6.1cgybmedB101
CsGy2G016980Bottle gourd (USVL1VR-Ls)cgyblsiB129
CsGy2G016980Melon (DHL92) v3.5.1cgybmeB102
CsGy2G016980Watermelon (Charleston Gray)cgybwcgB155
CsGy2G016980Watermelon (97103) v1cgybwmB098