CsGy2G015660 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G015660
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr2 : 15558602 .. 15558907 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATGGAAATGGAACGGTGAAAGCCAAAAGAAGAAATCACAAAACTCGGGGGTTGAGTTTTCTATTCTTTAGGCCACGTGTCCACAAAATAACTGATCTCTTCTTCCGCAGCAGTTTTCCGGCGACCACCCCACGTCGACCTCCGACAACGGCGTACGGACTTCGGCCACCAATGTTTATGTGACCGCATTGATGGTCTTACTCAAGAACTCACGACTCTCCCTTACTTTCGACAACTTCAACAACGATGGAACTTGCATTCGACGGAAATATTGGCCTCGTTGTTGTTTTTGGAATGACTAA

mRNA sequence

ATGAAATGGAAATGGAACGGTGAAAGCCAAAAGAAGAAATCACAAAACTCGGGGCAGTTTTCCGGCGACCACCCCACGTCGACCTCCGACAACGGCGTACGGACTTCGGCCACCAATGTTTATGTGACCGCATTGATGGTCTTACTCAAGAACTCACGACTCTCCCTTACTTTCGACAACTTCAACAACGATGGAACTTGCATTCGACGGAAATATTGGCCTCGTTGTTGTTTTTGGAATGACTAA

Coding sequence (CDS)

ATGAAATGGAAATGGAACGGTGAAAGCCAAAAGAAGAAATCACAAAACTCGGGGCAGTTTTCCGGCGACCACCCCACGTCGACCTCCGACAACGGCGTACGGACTTCGGCCACCAATGTTTATGTGACCGCATTGATGGTCTTACTCAAGAACTCACGACTCTCCCTTACTTTCGACAACTTCAACAACGATGGAACTTGCATTCGACGGAAATATTGGCCTCGTTGTTGTTTTTGGAATGACTAA

Protein sequence

MKWKWNGESQKKKSQNSGQFSGDHPTSTSDNGVRTSATNVYVTALMVLLKNSRLSLTFDNFNNDGTCIRRKYWPRCCFWND
Homology
[Close]
BLAST of CsGy2G015660 vs. NCBI nr
Match: KGN62152.1 (hypothetical protein Csa_2G302190 [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 2.5e-32
Identity = 70/81 (86.42%), Postives = 71/81 (87.65%), Query Frame = 0 

Query: 1  MKWKWNGESQKKKSQNSGQFSGDHPTSTSDNGVRTSATNVYVTALMVLLKNSRLSLTFDN 60
          M+WKWNG        N  QFSGDHPTSTSDNGVRTSATNVYVTALMVLLKNSRLSLTFDN
Sbjct: 1  MEWKWNG--------NGTQFSGDHPTSTSDNGVRTSATNVYVTALMVLLKNSRLSLTFDN 60

Query: 61 FNNDGTCIRRKYWPRCCFWND 82
          FNNDGTCIRRKYWPRCCFWND
Sbjct: 61 FNNDGTCIRRKYWPRCCFWND 73

[Close]
BLAST of CsGy2G015660 vs. TrEMBL
Match: tr|A0A0A0LMZ4|A0A0A0LMZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302190 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.7e-32
Identity = 70/81 (86.42%), Postives = 71/81 (87.65%), Query Frame = 0 

Query: 1  MKWKWNGESQKKKSQNSGQFSGDHPTSTSDNGVRTSATNVYVTALMVLLKNSRLSLTFDN 60
          M+WKWNG        N  QFSGDHPTSTSDNGVRTSATNVYVTALMVLLKNSRLSLTFDN
Sbjct: 1  MEWKWNG--------NGTQFSGDHPTSTSDNGVRTSATNVYVTALMVLLKNSRLSLTFDN 60

Query: 61 FNNDGTCIRRKYWPRCCFWND 82
          FNNDGTCIRRKYWPRCCFWND
Sbjct: 61 FNNDGTCIRRKYWPRCCFWND 73

The following BLAST results are available for this feature:
BLAST of CsGy2G015660 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62152.12.5e-3286.42hypothetical protein Csa_2G302190 [Cucumis sativus][more]
BLAST of CsGy2G015660 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy2G015660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy2G015660 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LMZ4|A0A0A0LMZ4_CUCSA1.7e-3286.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302190 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G015660.1CsGy2G015660.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..33