CsGy2G015330 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G015330
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionterpene synthase 10-like
LocationChr2 : 15276828 .. 15277295 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAGTATCTGTCCTCATTTCTCCAGACAAATTTACTCCTGTTTTATATCTGTAACCATCGTACCAAAATATTTAAAAAGAAAAATTCATCGGTTTTTTTTTATAATTAATTATCGTGTAGAACAGTAAGTTTTTTTTAGTAAACTGATGTCTATAAAAGCACAGAGACTTGCTTCAAACATTAAAGTCACTGGGAGAGTTTTGTTTTGTTAAATGAATATGAGAATGAGTCTTCTTCAGCTTCCTCTTCTTTCCCCCATTTCTTGCTTTCCCTCCACACAAAACAATATTCCTATTTCTTATCCTAAATTTTATGTTTCTTCCCACATGGCTAAGTCGTCGACTAATTATGTTCGAAATGGTTACGATGACTCTGTCGTTCGACGATCTGCAAATTACCGATCTCCTATTTGGAAGTATGAGTTTGTTCAATCGTTGACCAGTGAATTCATGGTAATATGTTGA

mRNA sequence

ATGGGTAGTATCTGTCCTCATTTCTCCAGACAAATTTACTCCTGTTTTATATCTCTTCCTCTTCTTTCCCCCATTTCTTGCTTTCCCTCCACACAAAACAATATTCCTATTTCTTATCCTAAATTTTATGTTTCTTCCCACATGGCTAAGTCGTCGACTAATTATGTTCGAAATGGTTACGATGACTCTGTCGTTCGACGATCTGCAAATTACCGATCTCCTATTTGGAAGTATGAGTTTGTTCAATCGTTGACCAGTGAATTCATGGTAATATGTTGA

Coding sequence (CDS)

ATGGGTAGTATCTGTCCTCATTTCTCCAGACAAATTTACTCCTGTTTTATATCTCTTCCTCTTCTTTCCCCCATTTCTTGCTTTCCCTCCACACAAAACAATATTCCTATTTCTTATCCTAAATTTTATGTTTCTTCCCACATGGCTAAGTCGTCGACTAATTATGTTCGAAATGGTTACGATGACTCTGTCGTTCGACGATCTGCAAATTACCGATCTCCTATTTGGAAGTATGAGTTTGTTCAATCGTTGACCAGTGAATTCATGGTAATATGTTGA

Protein sequence

MGSICPHFSRQIYSCFISLPLLSPISCFPSTQNNIPISYPKFYVSSHMAKSSTNYVRNGYDDSVVRRSANYRSPIWKYEFVQSLTSEFMVIC
Homology
[Close]
BLAST of CsGy2G015330 vs. NCBI nr
Match: XP_008460927.1 (PREDICTED: terpene synthase 10-like [Cucumis melo])

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-25
Identity = 61/73 (83.56%), Postives = 63/73 (86.30%), Query Frame = 0 

Query: 17 ISLPLLSPISCFPSTQNNIPISYPKFYVSSHMAKSSTNYVRNGYDDSVVRRSANYRSPIW 76
          + L LLSPISCF STQNNIP SYPKFYV S MAKSS NYVRNGYDD VVRR ANY+ PIW
Sbjct: 6  LQLSLLSPISCFASTQNNIPSSYPKFYVFSQMAKSSANYVRNGYDDFVVRRCANYQPPIW 65

Query: 77 KYEFVQSLTSEFM 90
          KYEFVQSLTSEFM
Sbjct: 66 KYEFVQSLTSEFM 78

[Close]
BLAST of CsGy2G015330 vs. NCBI nr
Match: KGN62117.1 (hypothetical protein Csa_2G299870 [Cucumis sativus])

HSP 1 Score: 96.3 bits (238), Expect = 5.8e-17
Identity = 47/70 (67.14%), Postives = 54/70 (77.14%), Query Frame = 0 

Query: 20 PLLSPISCFPSTQNNIPISYPKFYVSSHMAKSSTNYVRNGYDDSVVRRSANYRSPIWKYE 79
          PLLSPISCF STQN++P  +PKFYV S   K     VR  YDDS++RRSANY+ PIWK+E
Sbjct: 7  PLLSPISCFTSTQNSLPSHHPKFYVFSQTVKQLPT-VRKAYDDSIIRRSANYQPPIWKHE 66

Query: 80 FVQSLTSEFM 90
          FVQSL SEFM
Sbjct: 67 FVQSLQSEFM 75

[Close]
BLAST of CsGy2G015330 vs. NCBI nr
Match: XP_008461029.1 (PREDICTED: terpene synthase 10-like [Cucumis melo])

HSP 1 Score: 89.0 bits (219), Expect = 9.3e-15
Identity = 48/70 (68.57%), Postives = 55/70 (78.57%), Query Frame = 0 

Query: 20 PLLSPISCFPSTQNNIPISYPKFYVSSHMAKSSTNYVRNGYDDSVVRRSANYRSPIWKYE 79
          PLLSPIS F STQN++P S+PKFYV S + K S   VR   +DSVVRRSANY+ PIWK+E
Sbjct: 7  PLLSPISFFTSTQNSLP-SHPKFYVFSQIVKQSPT-VRKACNDSVVRRSANYQPPIWKHE 66

Query: 80 FVQSLTSEFM 90
          FVQSL SEFM
Sbjct: 67 FVQSLQSEFM 74

[Close]
BLAST of CsGy2G015330 vs. NCBI nr
Match: XP_022158731.1 (terpene synthase 10-like [Momordica charantia])

HSP 1 Score: 72.0 bits (175), Expect = 1.2e-09
Identity = 39/73 (53.42%), Postives = 50/73 (68.49%), Query Frame = 0 

Query: 17 ISLPLLSPISCFPSTQNNIPISYPKFYVSSHMAKSSTNYVRNGYDDSVVRRSANYRSPIW 76
          + LPL SP+S F +TQ  +P S+    + S M    T   +  YD+S+VRRSANY+ PIW
Sbjct: 6  LHLPLPSPLSSFTTTQ-PLP-SHSNLCILSRMVTRPTTVAKEVYDESIVRRSANYQPPIW 65

Query: 77 KYEFVQSLTSEFM 90
          K+EFVQSLTSEFM
Sbjct: 66 KHEFVQSLTSEFM 76

[Close]
BLAST of CsGy2G015330 vs. NCBI nr
Match: XP_022928016.1 (terpene synthase 10-like [Cucurbita moschata])

HSP 1 Score: 65.9 bits (159), Expect = 8.4e-08
Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 0 

Query: 17 ISLPLLSPISCFPSTQNNIPISYPK-FYVSSHMAKSSTNYVRNGYDDSVVRRSANYRSPI 76
          + LPLLS +S   S++N   +S+P+ FYVS  M K ST   +  Y+ SVVRRSANY+  I
Sbjct: 6  LHLPLLSSLSTLTSSRN---LSFPRNFYVSFQMNKRSTVDTK-VYNTSVVRRSANYQPSI 65

Query: 77 WKYEFVQSLTSEF 89
          WK+EFV+SLTSEF
Sbjct: 66 WKHEFVESLTSEF 74

[Close]
BLAST of CsGy2G015330 vs. Swiss-Prot
Match: sp|B9T536|TPS10_RICCO (Terpene synthase 10 OS=Ricinus communis OX=3988 GN=TPS10 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.7e-04
Identity = 18/29 (62.07%), Postives = 26/29 (89.66%), Query Frame = 0 

Query: 61 DDSVVRRSANYRSPIWKYEFVQSLTSEFM 90
          +++++RRSANYR PIW ++FVQSL SEF+
Sbjct: 8  NETIIRRSANYRPPIWDFDFVQSLKSEFV 36

[Close]
BLAST of CsGy2G015330 vs. TrEMBL
Match: tr|A0A1S3CDK7|A0A1S3CDK7_CUCME (terpene synthase 10-like OS=Cucumis melo OX=3656 GN=LOC103499664 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.0e-25
Identity = 61/73 (83.56%), Postives = 63/73 (86.30%), Query Frame = 0 

Query: 17 ISLPLLSPISCFPSTQNNIPISYPKFYVSSHMAKSSTNYVRNGYDDSVVRRSANYRSPIW 76
          + L LLSPISCF STQNNIP SYPKFYV S MAKSS NYVRNGYDD VVRR ANY+ PIW
Sbjct: 6  LQLSLLSPISCFASTQNNIPSSYPKFYVFSQMAKSSANYVRNGYDDFVVRRCANYQPPIW 65

Query: 77 KYEFVQSLTSEFM 90
          KYEFVQSLTSEFM
Sbjct: 66 KYEFVQSLTSEFM 78

[Close]
BLAST of CsGy2G015330 vs. TrEMBL
Match: tr|A0A0A0LMW7|A0A0A0LMW7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G299870 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.9e-17
Identity = 47/70 (67.14%), Postives = 54/70 (77.14%), Query Frame = 0 

Query: 20 PLLSPISCFPSTQNNIPISYPKFYVSSHMAKSSTNYVRNGYDDSVVRRSANYRSPIWKYE 79
          PLLSPISCF STQN++P  +PKFYV S   K     VR  YDDS++RRSANY+ PIWK+E
Sbjct: 7  PLLSPISCFTSTQNSLPSHHPKFYVFSQTVKQLPT-VRKAYDDSIIRRSANYQPPIWKHE 66

Query: 80 FVQSLTSEFM 90
          FVQSL SEFM
Sbjct: 67 FVQSLQSEFM 75

[Close]
BLAST of CsGy2G015330 vs. TrEMBL
Match: tr|A0A1S3CDT6|A0A1S3CDT6_CUCME (terpene synthase 10-like OS=Cucumis melo OX=3656 GN=LOC103499734 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.2e-15
Identity = 48/70 (68.57%), Postives = 55/70 (78.57%), Query Frame = 0 

Query: 20 PLLSPISCFPSTQNNIPISYPKFYVSSHMAKSSTNYVRNGYDDSVVRRSANYRSPIWKYE 79
          PLLSPIS F STQN++P S+PKFYV S + K S   VR   +DSVVRRSANY+ PIWK+E
Sbjct: 7  PLLSPISFFTSTQNSLP-SHPKFYVFSQIVKQSPT-VRKACNDSVVRRSANYQPPIWKHE 66

Query: 80 FVQSLTSEFM 90
          FVQSL SEFM
Sbjct: 67 FVQSLQSEFM 74

[Close]
BLAST of CsGy2G015330 vs. TrEMBL
Match: tr|A0A2I4H0T9|A0A2I4H0T9_9ROSI (myrcene synthase, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC109012528 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.4e-04
Identity = 32/75 (42.67%), Postives = 40/75 (53.33%), Query Frame = 0 

Query: 19 LPLLSPISCFPSTQNNIPISYPKFYVSSHMAKSSTNYVRNGYDDSV-VRRSANYRSPIWK 78
          LP  +PIS  PS   N         VS H    ST  + N   DS+ VRRSA+YR  IW 
Sbjct: 19 LPSKNPISPIPSGAGN---------VSDHHPLQSTTILNNSSTDSITVRRSADYRPTIWS 78

Query: 79 YEFVQSLTSEFMVIC 93
          Y+++QSL SE+   C
Sbjct: 79 YDYIQSLRSEYGESC 84

[Close]
BLAST of CsGy2G015330 vs. TrEMBL
Match: tr|A0A2I4H0V6|A0A2I4H0V6_9ROSI (myrcene synthase, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC109012529 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.4e-04
Identity = 32/75 (42.67%), Postives = 40/75 (53.33%), Query Frame = 0 

Query: 19 LPLLSPISCFPSTQNNIPISYPKFYVSSHMAKSSTNYVRNGYDDSV-VRRSANYRSPIWK 78
          LP  +PIS  PS   N         VS H    ST  + N   DS+ VRRSA+YR  IW 
Sbjct: 19 LPSKNPISPIPSGAGN---------VSDHHPLQSTTILNNSSTDSITVRRSADYRPTIWS 78

Query: 79 YEFVQSLTSEFMVIC 93
          Y+++QSL SE+   C
Sbjct: 79 YDYIQSLRSEYGESC 84

The following BLAST results are available for this feature:
BLAST of CsGy2G015330 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008460927.11.5e-2583.56PREDICTED: terpene synthase 10-like [Cucumis melo][more]
KGN62117.15.8e-1767.14hypothetical protein Csa_2G299870 [Cucumis sativus][more]
XP_008461029.19.3e-1568.57PREDICTED: terpene synthase 10-like [Cucumis melo][more]
XP_022158731.11.2e-0953.42terpene synthase 10-like [Momordica charantia][more]
XP_022928016.18.4e-0854.79terpene synthase 10-like [Cucurbita moschata][more]
BLAST of CsGy2G015330 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy2G015330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|B9T536|TPS10_RICCO1.7e-0462.07Terpene synthase 10 OS=Ricinus communis OX=3988 GN=TPS10 PE=2 SV=1[more]
BLAST of CsGy2G015330 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CDK7|A0A1S3CDK7_CUCME1.0e-2583.56terpene synthase 10-like OS=Cucumis melo OX=3656 GN=LOC103499664 PE=3 SV=1[more]
tr|A0A0A0LMW7|A0A0A0LMW7_CUCSA3.9e-1767.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G299870 PE=3 SV=1[more]
tr|A0A1S3CDT6|A0A1S3CDT6_CUCME6.2e-1568.57terpene synthase 10-like OS=Cucumis melo OX=3656 GN=LOC103499734 PE=3 SV=1[more]
tr|A0A2I4H0T9|A0A2I4H0T9_9ROSI6.4e-0442.67myrcene synthase, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC109012528 P... [more]
tr|A0A2I4H0V6|A0A2I4H0V6_9ROSI6.4e-0442.67myrcene synthase, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC109012529 P... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0010333 terpene synthase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G015330.1CsGy2G015330.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy2G015330Cla97C02G027150Watermelon (97103) v2cgybwmbB115
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G015330Cucumber (Gy14) v2cgybcgybB066
CsGy2G015330Cucurbita maxima (Rimu)cgybcmaB219
CsGy2G015330Cucurbita maxima (Rimu)cgybcmaB223
CsGy2G015330Cucurbita maxima (Rimu)cgybcmaB232
CsGy2G015330Cucurbita maxima (Rimu)cgybcmaB238
CsGy2G015330Cucurbita moschata (Rifu)cgybcmoB210
CsGy2G015330Cucurbita moschata (Rifu)cgybcmoB214
CsGy2G015330Cucurbita moschata (Rifu)cgybcmoB215
CsGy2G015330Cucurbita moschata (Rifu)cgybcmoB224
CsGy2G015330Cucurbita pepo (Zucchini)cgybcpeB156
CsGy2G015330Cucurbita pepo (Zucchini)cgybcpeB194
CsGy2G015330Cucurbita pepo (Zucchini)cgybcpeB243
CsGy2G015330Cucumber (Chinese Long) v2cgybcuB056
CsGy2G015330Cucumber (Chinese Long) v2cgybcuB084
CsGy2G015330Bottle gourd (USVL1VR-Ls)cgyblsiB086
CsGy2G015330Bottle gourd (USVL1VR-Ls)cgyblsiB096
CsGy2G015330Watermelon (Charleston Gray)cgybwcgB113
CsGy2G015330Watermelon (Charleston Gray)cgybwcgB121
CsGy2G015330Watermelon (97103) v1cgybwmB127
CsGy2G015330Watermelon (97103) v1cgybwmB134
CsGy2G015330Wild cucumber (PI 183967)cgybcpiB056
CsGy2G015330Wild cucumber (PI 183967)cgybcpiB084
CsGy2G015330Silver-seed gourdcarcgybB0253
CsGy2G015330Silver-seed gourdcarcgybB1038
CsGy2G015330Silver-seed gourdcarcgybB1040
CsGy2G015330Cucumber (Chinese Long) v3cgybcucB064
CsGy2G015330Cucumber (Chinese Long) v3cgybcucB089
CsGy2G015330Watermelon (97103) v2cgybwmbB094
CsGy2G015330Wax gourdcgybwgoB169
CsGy2G015330Wax gourdcgybwgoB184