CsGy2G013230 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G013230
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	auxin transporter-like protein 2
Location	Chr2 : 13007610 .. 13008378 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCAATGTGGAAGCCAGAGAAATTTAAAGGGATATATTTGATGGCTACGGCTTATGTATTGACATTGACACTTCCATCAGCGGCGGCTGTTTATTGGGCATTTGGAGATTTGCTTCTTAATCATTCTAATGCCTTTGCTCTTCTTCCTAAATCTTCCTTCAGGGATTTGGCTGTTGTTTTAATGCTCATTCATCAGGTCATTTTTTTCAACTTTATCATTTCATTAATTTTCTTTTTATGTCAGTTTTGTAGTTCTGTCTATTTATTACATCCAAGTGATTAATTATCAGTTCAATTGAAGTGGTTTTTTCTTATCAAACTGACTTTGATCAACTGTATGCATGAATTCAGTCTTTTTCTAATTCATGATATTTTTCTATAAGAAATGAGAATTAGGTTAGAGATGTGTTCGTGGGTTATAGATCAGGTTGGATTGTGTTTAAGCATTTTGTGACAAGGAAAAGGTAGGGACGTAGCATTTTGAGAAACGAGAAGGAGCAATGGTTGGTGACATGTATGAACCATCTTAGAGATGGGAGGAACAACAGACGGAGACATGAGAACCTAGGAGGAAAATCATAAAACCAGCCGCCTAAAAAGACCGAACTTGTTTTGTTACTAGATAATAAATATAATTAGAAACTTTATAGAAAAAAAACCTCAAGTTTGCTTGATTGGTTTTTGGTGAGTGAATTGAATATTACCCCGTCCTTTTCAATAACTTTAAATATTTGTTTATTTATATAAAGGATAACATGATTTGA

mRNA sequence

ATGGATGCAATGTGGAAGCCAGAGAAATTTAAAGGGATATATTTGATGGCTACGGCTTATGTATTGACATTGACACTTCCATCAGCGGCGGCTGTTTATTGGGCATTTGGAGATTTGCTTCTTAATCATTCTAATGCCTTTGCTCTTCTTCCTAAATCTTCCTTCAGGGATTTGGCTGTTGTTTTAATGCTCATTCATCAGGATAACATGATTTGA

Coding sequence (CDS)

ATGGATGCAATGTGGAAGCCAGAGAAATTTAAAGGGATATATTTGATGGCTACGGCTTATGTATTGACATTGACACTTCCATCAGCGGCGGCTGTTTATTGGGCATTTGGAGATTTGCTTCTTAATCATTCTAATGCCTTTGCTCTTCTTCCTAAATCTTCCTTCAGGGATTTGGCTGTTGTTTTAATGCTCATTCATCAGGATAACATGATTTGA

Protein sequence

MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAVVLMLIHQDNMI

Homology

[Close]

BLAST of CsGy2G013230 vs. NCBI nr
Match: XP_004147069.2 (PREDICTED: auxin transporter-like protein 2 [Cucumis sativus] >KGN61915.1 hypothetical protein Csa_2G264590 [Cucumis sativus])

HSP 1 Score: 135.6 bits (340), Expect = 6.7e-29
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1   MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 60
           MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV
Sbjct: 258 MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 317

Query: 61  VLMLIHQ 68
           VLMLIHQ
Sbjct: 318 VLMLIHQ 324

[Close]

BLAST of CsGy2G013230 vs. NCBI nr
Match: AVN97812.1 (auxin transporter protein, partial [Cucumis sativus])

HSP 1 Score: 135.6 bits (340), Expect = 6.7e-29
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1   MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 60
           MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV
Sbjct: 258 MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 317

Query: 61  VLMLIHQ 68
           VLMLIHQ
Sbjct: 318 VLMLIHQ 324

[Close]

BLAST of CsGy2G013230 vs. NCBI nr
Match: XP_008457668.1 (PREDICTED: auxin transporter-like protein 2 [Cucumis melo])

HSP 1 Score: 132.9 bits (333), Expect = 4.3e-28
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 60
           MDAMWKPEKFKGIYLMAT YVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKS+FRDLAV
Sbjct: 258 MDAMWKPEKFKGIYLMATVYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSTFRDLAV 317

Query: 61  VLMLIHQ 68
           VLMLIHQ
Sbjct: 318 VLMLIHQ 324

[Close]

BLAST of CsGy2G013230 vs. NCBI nr
Match: XP_022146211.1 (auxin transporter-like protein 5 [Momordica charantia])

HSP 1 Score: 123.6 bits (309), Expect = 2.6e-25
Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1   MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 60
           M AMWKPEKFK IYL+AT YV+TLTLPSAAAVYWAFGDLLLNHSNAFALLPKS FRD+AV
Sbjct: 251 MHAMWKPEKFKSIYLVATVYVVTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSPFRDMAV 310

Query: 61  VLMLIHQ 68
           VLMLIHQ
Sbjct: 311 VLMLIHQ 317

[Close]

BLAST of CsGy2G013230 vs. NCBI nr
Match: XP_023534042.1 (auxin transporter-like protein 5 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 123.6 bits (309), Expect = 2.6e-25
Identity = 61/67 (91.04%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1   MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 60
           M AMWKPEKFK IYL+AT YVLTLTLPSAAAVYWAFGDLLL+HSNAFALLPKS FRDLAV
Sbjct: 233 MHAMWKPEKFKAIYLVATVYVLTLTLPSAAAVYWAFGDLLLSHSNAFALLPKSPFRDLAV 292

Query: 61  VLMLIHQ 68
           VLMLIHQ
Sbjct: 293 VLMLIHQ 299

[Close]

BLAST of CsGy2G013230 vs. TAIR10
Match: AT2G21050.1 (like AUXIN RESISTANT 2)

HSP 1 Score: 118.2 bits (295), Expect = 2.0e-27
Identity = 57/67 (85.07%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1   MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 60
           M AMWKP+KFK IYL AT YVLTLTLPSA+AVYWAFGDLLLNHSNAFALLPK+ +RD AV
Sbjct: 250 MHAMWKPQKFKSIYLFATLYVLTLTLPSASAVYWAFGDLLLNHSNAFALLPKNLYRDFAV 309

Query: 61  VLMLIHQ 68
           VLMLIHQ
Sbjct: 310 VLMLIHQ 316

[Close]

BLAST of CsGy2G013230 vs. TAIR10
Match: AT5G01240.1 (like AUXIN RESISTANT 1)

HSP 1 Score: 115.2 bits (287), Expect = 1.7e-26
Identity = 55/67 (82.09%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 1   MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 60
           M AMWKP KFK IYLMAT YV TLTLPSA+AVYWAFGD LLNHSNAF+LLPK+ FRD AV
Sbjct: 262 MHAMWKPRKFKSIYLMATLYVFTLTLPSASAVYWAFGDQLLNHSNAFSLLPKTRFRDTAV 321

Query: 61  VLMLIHQ 68
           +LMLIHQ
Sbjct: 322 ILMLIHQ 328

[Close]

BLAST of CsGy2G013230 vs. TAIR10
Match: AT1G77690.1 (like AUX1 3)

HSP 1 Score: 112.1 bits (279), Expect = 1.4e-25
Identity = 53/67 (79.10%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 1   MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 60
           M AMWKP+KFK IYL+AT YVLTLTLPSA+AVYWAFGD LL HSNA +LLPK+ FRD AV
Sbjct: 254 MHAMWKPQKFKAIYLLATIYVLTLTLPSASAVYWAFGDKLLTHSNALSLLPKTGFRDTAV 313

Query: 61  VLMLIHQ 68
           +LMLIHQ
Sbjct: 314 ILMLIHQ 320

[Close]

BLAST of CsGy2G013230 vs. TAIR10
Match: AT2G38120.1 (Transmembrane amino acid transporter family protein)

HSP 1 Score: 111.7 bits (278), Expect = 1.9e-25
Identity = 52/67 (77.61%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1   MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 60
           M AMWKP+KFK IYLMAT YV TLT+PSAAAVYWAFGD LL+HSNAF+L+PK+++RD AV
Sbjct: 256 MHAMWKPQKFKYIYLMATLYVFTLTIPSAAAVYWAFGDALLDHSNAFSLMPKNAWRDAAV 315

Query: 61  VLMLIHQ 68
           +LMLIHQ
Sbjct: 316 ILMLIHQ 322

[Close]

BLAST of CsGy2G013230 vs. Swiss-Prot
Match: sp|Q8L883|LAX5_MEDTR (Auxin transporter-like protein 5 OS=Medicago truncatula OX=3880 GN=LAX5 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 9.5e-27
Identity = 56/67 (83.58%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1   MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 60
           M AMWKP+KFK IYL+AT YVLTLT+PSA AVYWAFGD+LLNHSNAFALLPKS FRD+AV
Sbjct: 252 MHAMWKPQKFKAIYLLATLYVLTLTIPSATAVYWAFGDMLLNHSNAFALLPKSPFRDMAV 311

Query: 61  VLMLIHQ 68
           +LMLIHQ
Sbjct: 312 ILMLIHQ 318

[Close]

BLAST of CsGy2G013230 vs. Swiss-Prot
Match: sp|Q9S836|LAX2_ARATH (Auxin transporter-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=LAX2 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 3.6e-26
Identity = 57/67 (85.07%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1   MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 60
           M AMWKP+KFK IYL AT YVLTLTLPSA+AVYWAFGDLLLNHSNAFALLPK+ +RD AV
Sbjct: 250 MHAMWKPQKFKSIYLFATLYVLTLTLPSASAVYWAFGDLLLNHSNAFALLPKNLYRDFAV 309

Query: 61  VLMLIHQ 68
           VLMLIHQ
Sbjct: 310 VLMLIHQ 316

[Close]

BLAST of CsGy2G013230 vs. Swiss-Prot
Match: sp|Q9LFB2|LAX1_ARATH (Auxin transporter-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=LAX1 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.1e-25
Identity = 55/67 (82.09%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 1   MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 60
           M AMWKP KFK IYLMAT YV TLTLPSA+AVYWAFGD LLNHSNAF+LLPK+ FRD AV
Sbjct: 262 MHAMWKPRKFKSIYLMATLYVFTLTLPSASAVYWAFGDQLLNHSNAFSLLPKTRFRDTAV 321

Query: 61  VLMLIHQ 68
           +LMLIHQ
Sbjct: 322 ILMLIHQ 328

[Close]

BLAST of CsGy2G013230 vs. Swiss-Prot
Match: sp|Q9CA25|LAX3_ARATH (Auxin transporter-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=LAX3 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.6e-24
Identity = 53/67 (79.10%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 1   MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 60
           M AMWKP+KFK IYL+AT YVLTLTLPSA+AVYWAFGD LL HSNA +LLPK+ FRD AV
Sbjct: 254 MHAMWKPQKFKAIYLLATIYVLTLTLPSASAVYWAFGDKLLTHSNALSLLPKTGFRDTAV 313

Query: 61  VLMLIHQ 68
           +LMLIHQ
Sbjct: 314 ILMLIHQ 320

[Close]

BLAST of CsGy2G013230 vs. Swiss-Prot
Match: sp|Q96247|AUX1_ARATH (Auxin transporter protein 1 OS=Arabidopsis thaliana OX=3702 GN=AUX1 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 3.4e-24
Identity = 52/67 (77.61%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1   MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 60
           M AMWKP+KFK IYLMAT YV TLT+PSAAAVYWAFGD LL+HSNAF+L+PK+++RD AV
Sbjct: 256 MHAMWKPQKFKYIYLMATLYVFTLTIPSAAAVYWAFGDALLDHSNAFSLMPKNAWRDAAV 315

Query: 61  VLMLIHQ 68
           +LMLIHQ
Sbjct: 316 ILMLIHQ 322

[Close]

BLAST of CsGy2G013230 vs. TrEMBL
Match: tr|A0A2P1JH91|A0A2P1JH91_CUCSA (Auxin transporter protein (Fragment) OS=Cucumis sativus OX=3659 GN=ns PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.4e-29
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1   MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 60
           MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV
Sbjct: 258 MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 317

Query: 61  VLMLIHQ 68
           VLMLIHQ
Sbjct: 318 VLMLIHQ 324

[Close]

BLAST of CsGy2G013230 vs. TrEMBL
Match: tr|A0A0A0LJ42|A0A0A0LJ42_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G264590 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.4e-29
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1   MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 60
           MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV
Sbjct: 258 MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 317

Query: 61  VLMLIHQ 68
           VLMLIHQ
Sbjct: 318 VLMLIHQ 324

[Close]

BLAST of CsGy2G013230 vs. TrEMBL
Match: tr|A0A1S3C601|A0A1S3C601_CUCME (auxin transporter-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103497313 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.9e-28
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 60
           MDAMWKPEKFKGIYLMAT YVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKS+FRDLAV
Sbjct: 258 MDAMWKPEKFKGIYLMATVYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSTFRDLAV 317

Query: 61  VLMLIHQ 68
           VLMLIHQ
Sbjct: 318 VLMLIHQ 324

[Close]

BLAST of CsGy2G013230 vs. TrEMBL
Match: tr|A0A022RL37|A0A022RL37_ERYGU (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a005408mg PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.3e-25
Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1   MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 60
           M AMWKPEKFKGIYL+AT YVLTLT+PSA AVYWAFGDLLLNHSNAFALLPKS FRD++V
Sbjct: 251 MHAMWKPEKFKGIYLVATVYVLTLTIPSATAVYWAFGDLLLNHSNAFALLPKSHFRDISV 310

Query: 61  VLMLIHQ 68
           +LMLIHQ
Sbjct: 311 ILMLIHQ 317

[Close]

BLAST of CsGy2G013230 vs. TrEMBL
Match: tr|A0A1S3TL76|A0A1S3TL76_VIGRR (auxin transporter-like protein 5 OS=Vigna radiata var. radiata OX=3916 GN=LOC106756563 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.9e-25
Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1   MDAMWKPEKFKGIYLMATAYVLTLTLPSAAAVYWAFGDLLLNHSNAFALLPKSSFRDLAV 60
           M AMWKP+KFK IYL+AT YVLTLTLPSAAAVYWAFGD+LLNHSNAFALLPKS FRD+AV
Sbjct: 249 MHAMWKPQKFKAIYLLATLYVLTLTLPSAAAVYWAFGDMLLNHSNAFALLPKSPFRDMAV 308

Query: 61  VLMLIHQ 68
           +LMLIHQ
Sbjct: 309 ILMLIHQ 315

The following BLAST results are available for this feature:

BLAST of CsGy2G013230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147069.2	6.7e-29	100.00	PREDICTED: auxin transporter-like protein 2 [Cucumis sativus] >KGN61915.1 hypoth...	[more]
AVN97812.1	6.7e-29	100.00	auxin transporter protein, partial [Cucumis sativus]	[more]
XP_008457668.1	4.3e-28	97.01	PREDICTED: auxin transporter-like protein 2 [Cucumis melo]	[more]
XP_022146211.1	2.6e-25	89.55	auxin transporter-like protein 5 [Momordica charantia]	[more]
XP_023534042.1	2.6e-25	91.04	auxin transporter-like protein 5 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy2G013230 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21050.1	2.0e-27	85.07	like AUXIN RESISTANT 2	[more]
AT5G01240.1	1.7e-26	82.09	like AUXIN RESISTANT 1	[more]
AT1G77690.1	1.4e-25	79.10	like AUX1 3	[more]
AT2G38120.1	1.9e-25	77.61	Transmembrane amino acid transporter family protein	[more]

BLAST of CsGy2G013230 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8L883\|LAX5_MEDTR	9.5e-27	83.58	Auxin transporter-like protein 5 OS=Medicago truncatula OX=3880 GN=LAX5 PE=2 SV=...	[more]
sp\|Q9S836\|LAX2_ARATH	3.6e-26	85.07	Auxin transporter-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=LAX2 PE=2 SV...	[more]
sp\|Q9LFB2\|LAX1_ARATH	3.1e-25	82.09	Auxin transporter-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=LAX1 PE=2 SV...	[more]
sp\|Q9CA25\|LAX3_ARATH	2.6e-24	79.10	Auxin transporter-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=LAX3 PE=2 SV...	[more]
sp\|Q96247\|AUX1_ARATH	3.4e-24	77.61	Auxin transporter protein 1 OS=Arabidopsis thaliana OX=3702 GN=AUX1 PE=1 SV=1	[more]

BLAST of CsGy2G013230 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2P1JH91\|A0A2P1JH91_CUCSA	4.4e-29	100.00	Auxin transporter protein (Fragment) OS=Cucumis sativus OX=3659 GN=ns PE=4 SV=1	[more]
tr\|A0A0A0LJ42\|A0A0A0LJ42_CUCSA	4.4e-29	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G264590 PE=4 SV=1	[more]
tr\|A0A1S3C601\|A0A1S3C601_CUCME	2.9e-28	97.01	auxin transporter-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103497313 PE=4 SV...	[more]
tr\|A0A022RL37\|A0A022RL37_ERYGU	2.3e-25	86.57	Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a005408mg PE...	[more]
tr\|A0A1S3TL76\|A0A1S3TL76_VIGRR	3.9e-25	86.57	auxin transporter-like protein 5 OS=Vigna radiata var. radiata OX=3916 GN=LOC106...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013057	AA_transpt_TM

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G013230.1	CsGy2G013230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013057	Amino acid transporter, transmembrane domain	PFAM	PF01490	Aa_trans	coord: 1..66 e-value: 1.7E-9 score: 36.8
None	No IPR available	PANTHER	PTHR22950:SF342	AUXIN TRANSPORTER-LIKE PROTEIN 1	coord: 1..67
None	No IPR available	PANTHER	PTHR22950	AMINO ACID TRANSPORTER	coord: 1..67

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G013230	MELO3C020801.2	Melon (DHL92) v3.6.1	cgybmedB079
CsGy2G013230	MELO3C013367.2	Melon (DHL92) v3.6.1	cgybmedB084
CsGy2G013230	CsaV3_2G015870	Cucumber (Chinese Long) v3	cgybcucB064
CsGy2G013230	CsaV3_7G000890	Cucumber (Chinese Long) v3	cgybcucB093
CsGy2G013230	Cla97C02G037350	Watermelon (97103) v2	cgybwmbB110
CsGy2G013230	Cla97C02G031020	Watermelon (97103) v2	cgybwmbB117
CsGy2G013230	Bhi10G001480	Wax gourd	cgybwgoB175
CsGy2G013230	Bhi05G001486	Wax gourd	cgybwgoB146
CsGy2G013230	Carg05701	Silver-seed gourd	carcgybB0999
CsGy2G013230	Carg19791	Silver-seed gourd	carcgybB0842
CsGy2G013230	Carg19358	Silver-seed gourd	carcgybB0325

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G013230	Cucurbita moschata (Rifu)	cgybcmoB150
CsGy2G013230	Cucumber (Gy14) v2	cgybcgybB061
CsGy2G013230	Cucumber (Gy14) v2	cgybcgybB071
CsGy2G013230	Cucurbita maxima (Rimu)	cgybcmaB165
CsGy2G013230	Cucurbita maxima (Rimu)	cgybcmaB200
CsGy2G013230	Cucurbita maxima (Rimu)	cgybcmaB208
CsGy2G013230	Cucurbita maxima (Rimu)	cgybcmaB218
CsGy2G013230	Cucurbita maxima (Rimu)	cgybcmaB256
CsGy2G013230	Cucurbita moschata (Rifu)	cgybcmoB194
CsGy2G013230	Cucurbita moschata (Rifu)	cgybcmoB202
CsGy2G013230	Cucurbita moschata (Rifu)	cgybcmoB209
CsGy2G013230	Cucurbita pepo (Zucchini)	cgybcpeB185
CsGy2G013230	Cucurbita pepo (Zucchini)	cgybcpeB193
CsGy2G013230	Cucurbita pepo (Zucchini)	cgybcpeB226
CsGy2G013230	Cucurbita pepo (Zucchini)	cgybcpeB234
CsGy2G013230	Cucumber (Chinese Long) v2	cgybcuB056
CsGy2G013230	Cucumber (Chinese Long) v2	cgybcuB080
CsGy2G013230	Cucumber (Chinese Long) v2	cgybcuB086
CsGy2G013230	Bottle gourd (USVL1VR-Ls)	cgyblsiB086
CsGy2G013230	Bottle gourd (USVL1VR-Ls)	cgyblsiB090
CsGy2G013230	Bottle gourd (USVL1VR-Ls)	cgyblsiB100
CsGy2G013230	Melon (DHL92) v3.5.1	cgybmeB084
CsGy2G013230	Melon (DHL92) v3.5.1	cgybmeB088
CsGy2G013230	Melon (DHL92) v3.5.1	cgybmeB133
CsGy2G013230	Watermelon (Charleston Gray)	cgybwcgB115
CsGy2G013230	Watermelon (Charleston Gray)	cgybwcgB122
CsGy2G013230	Watermelon (97103) v1	cgybwmB129
CsGy2G013230	Watermelon (97103) v1	cgybwmB133
CsGy2G013230	Watermelon (97103) v1	cgybwmB141
CsGy2G013230	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G013230	Wild cucumber (PI 183967)	cgybcpiB081
CsGy2G013230	Wild cucumber (PI 183967)	cgybcpiB086
CsGy2G013230	Silver-seed gourd	carcgybB0356