CsGy2G012100 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G012100
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr2 : 12071852 .. 12072049 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGGGGATAACTATCGACCCTACAAGATACACCGTCTGGAGTTAGTATATTCATTCAACGGTGTATATGACATGACTCGTATGGAGTTGGTAATACCTCCCGACGGGGTGTACCACCTGTTGGGATCGTTTCCCAATGGGGTTTGCCTGATTAATCTTTCAATGACGTTTGTCTGTCGACATAGAGAGTTTTAA

mRNA sequence

ATGGTAGGGGATAACTATCGACCCTACAAGATACACCGTCTGGAGTTAGTATATTCATTCAACGGTGTATATGACATGACTCGTATGGAGTTGGTAATACCTCCCGACGGGGTGTACCACCTGTTGGGATCGTTTCCCAATGGGGTTTGCCTGATTAATCTTTCAATGACGTTTGTCTGTCGACATAGAGAGTTTTAA

Coding sequence (CDS)

ATGGTAGGGGATAACTATCGACCCTACAAGATACACCGTCTGGAGTTAGTATATTCATTCAACGGTGTATATGACATGACTCGTATGGAGTTGGTAATACCTCCCGACGGGGTGTACCACCTGTTGGGATCGTTTCCCAATGGGGTTTGCCTGATTAATCTTTCAATGACGTTTGTCTGTCGACATAGAGAGTTTTAA

Protein sequence

MVGDNYRPYKIHRLELVYSFNGVYDMTRMELVIPPDGVYHLLGSFPNGVCLINLSMTFVCRHREF
Homology
[Close]
BLAST of CsGy2G012100 vs. NCBI nr
Match: KGN61785.1 (hypothetical protein Csa_2G245490 [Cucumis sativus])

HSP 1 Score: 105.9 bits (263), Expect = 5.2e-20
Identity = 49/52 (94.23%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 1  MVGDNYRPYKIHRLELVYSFNGVYDMTRMXXXIPPDGVYHLLGSFPNGVCLI 53
          MVGDNYRPYKIHRLELVYSFNGVYDMTRMXXXIPPDGVYHLLGSFPNG C++
Sbjct: 1  MVGDNYRPYKIHRLELVYSFNGVYDMTRMXXXIPPDGVYHLLGSFPNGECVL 52

[Close]
BLAST of CsGy2G012100 vs. TrEMBL
Match: tr|A0A0A0LIP2|A0A0A0LIP2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G245490 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.4e-20
Identity = 49/52 (94.23%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 1  MVGDNYRPYKIHRLELVYSFNGVYDMTRMXXXIPPDGVYHLLGSFPNGVCLI 53
          MVGDNYRPYKIHRLELVYSFNGVYDMTRMXXXIPPDGVYHLLGSFPNG C++
Sbjct: 1  MVGDNYRPYKIHRLELVYSFNGVYDMTRMXXXIPPDGVYHLLGSFPNGECVL 52

The following BLAST results are available for this feature:
BLAST of CsGy2G012100 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61785.15.2e-2094.23hypothetical protein Csa_2G245490 [Cucumis sativus][more]
BLAST of CsGy2G012100 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy2G012100 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy2G012100 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LIP2|A0A0A0LIP2_CUCSA3.4e-2094.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G245490 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G012100.1CsGy2G012100.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy2G012100Csa2G245490Cucumber (Chinese Long) v2cgybcuB056
CsGy2G012100CsaV3_2G014620Cucumber (Chinese Long) v3cgybcucB064
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G012100Cucumber (Gy14) v2cgybcgybB076
CsGy2G012100Cucurbita maxima (Rimu)cgybcmaB212
CsGy2G012100Cucurbita maxima (Rimu)cgybcmaB218
CsGy2G012100Cucurbita maxima (Rimu)cgybcmaB229
CsGy2G012100Cucurbita moschata (Rifu)cgybcmoB202
CsGy2G012100Cucurbita moschata (Rifu)cgybcmoB209
CsGy2G012100Cucurbita moschata (Rifu)cgybcmoB220
CsGy2G012100Cucurbita pepo (Zucchini)cgybcpeB185
CsGy2G012100Cucurbita pepo (Zucchini)cgybcpeB193
CsGy2G012100Cucurbita pepo (Zucchini)cgybcpeB240
CsGy2G012100Cucumber (Chinese Long) v2cgybcuB092
CsGy2G012100Bottle gourd (USVL1VR-Ls)cgyblsiB086
CsGy2G012100Bottle gourd (USVL1VR-Ls)cgyblsiB090
CsGy2G012100Melon (DHL92) v3.5.1cgybmeB082
CsGy2G012100Melon (DHL92) v3.6.1cgybmedB078
CsGy2G012100Melon (DHL92) v3.6.1cgybmedB083
CsGy2G012100Watermelon (Charleston Gray)cgybwcgB089
CsGy2G012100Watermelon (Charleston Gray)cgybwcgB103
CsGy2G012100Watermelon (Charleston Gray)cgybwcgB122
CsGy2G012100Watermelon (97103) v1cgybwmB099
CsGy2G012100Watermelon (97103) v1cgybwmB147
CsGy2G012100Watermelon (97103) v1cgybwmB141
CsGy2G012100Wild cucumber (PI 183967)cgybcpiB056
CsGy2G012100Wild cucumber (PI 183967)cgybcpiB092
CsGy2G012100Silver-seed gourdcarcgybB0786
CsGy2G012100Silver-seed gourdcarcgybB0879
CsGy2G012100Cucumber (Chinese Long) v3cgybcucB097
CsGy2G012100Watermelon (97103) v2cgybwmbB105
CsGy2G012100Watermelon (97103) v2cgybwmbB117
CsGy2G012100Wax gourdcgybwgoB142
CsGy2G012100Wax gourdcgybwgoB175