CsGy2G011110 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G011110
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr2 : 10988839 .. 10989269 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAATAAGTTCATATTTAGGTCACCATTTGGGTTGCATATTACTCTTAACAAAAAAATTGGAGGGGGACACCAAAGATACTTCAACATTGTCACTGTTTCTAGGGATTTTATCATTCATTTTCAAGGTTTTGTTAATGTCTTTCATAATCTTCTCTTCATGAATTTTGACCGAATGATTTCTGAATTTCGGTCGGAGGATTTTTCCTCCACTGTGAGGATTTCTAATGAACAAGTAGTAGAGAGTTTCACATCTTCACTAATTTTGAGCGGACAACTTCATGCACAATGTTTTTTTTCTTCTTCTTTTTAGAACAGATTGAAGGTGAAGAAGAACAAGAAAGAATAGAGGGTTTCCTCTTGGGAAGAGGAAGAGAGAATCTAGAGTTTTGTATTGGAAACCTAATCTATCAATTAGGGTTGATATGA

mRNA sequence

ATGTCTAATAAGTTCATATTTAGGTCACCATTTGGGTTGCATATTACTCTTAACAAAAAAATTGGAGGGGGACACCAAAGATACTTCAACATTGTCACTGTTTCTAGGGATTTTATCATTCATTTTCAAGGTTTTGTTAATGTCTTTCATAATCTTCTCTTCATGAATTTTGACCGAATGATTTCTGAATTTCGGTCGGAGGATTTTTCCTCCACTGTGAGGATTTCTAATGAACAAATTGAAGGTGAAGAAGAACAAGAAAGAATAGAGGGTTTCCTCTTGGGAAGAGGAAGAGAGAATCTAGAGTTTTGTATTGGAAACCTAATCTATCAATTAGGGTTGATATGA

Coding sequence (CDS)

ATGTCTAATAAGTTCATATTTAGGTCACCATTTGGGTTGCATATTACTCTTAACAAAAAAATTGGAGGGGGACACCAAAGATACTTCAACATTGTCACTGTTTCTAGGGATTTTATCATTCATTTTCAAGGTTTTGTTAATGTCTTTCATAATCTTCTCTTCATGAATTTTGACCGAATGATTTCTGAATTTCGGTCGGAGGATTTTTCCTCCACTGTGAGGATTTCTAATGAACAAATTGAAGGTGAAGAAGAACAAGAAAGAATAGAGGGTTTCCTCTTGGGAAGAGGAAGAGAGAATCTAGAGTTTTGTATTGGAAACCTAATCTATCAATTAGGGTTGATATGA

Protein sequence

MSNKFIFRSPFGLHITLNKKIGGGHQRYFNIVTVSRDFIIHFQGFVNVFHNLLFMNFDRMISEFRSEDFSSTVRISNEQIEGEEEQERIEGFLLGRGRENLEFCIGNLIYQLGLI
Homology
[Close]
BLAST of CsGy2G011110 vs. NCBI nr
Match: KGN61675.1 (hypothetical protein Csa_2G223660 [Cucumis sativus])

HSP 1 Score: 151.0 bits (380), Expect = 2.5e-33
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0 

Query: 1  MSNKFIFRSPFGLHITLNKKIGGGHQRYFNIVTVSRDFIIHFQGFVNVFHNLLFMNFDRM 60
          MSNKFIFRSPFGLHITLNKKIGGGHQRYFNIVTVSRDFIIHFQGFVNVFHNLLFMNFDRM
Sbjct: 1  MSNKFIFRSPFGLHITLNKKIGGGHQRYFNIVTVSRDFIIHFQGFVNVFHNLLFMNFDRM 60

Query: 61 ISEFRSEDFSSTVRI 76
          ISEFRSEDFSST R+
Sbjct: 61 ISEFRSEDFSSTNRL 75

[Close]
BLAST of CsGy2G011110 vs. TrEMBL
Match: tr|A0A0A0LIC9|A0A0A0LIC9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G223660 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.7e-33
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0 

Query: 1  MSNKFIFRSPFGLHITLNKKIGGGHQRYFNIVTVSRDFIIHFQGFVNVFHNLLFMNFDRM 60
          MSNKFIFRSPFGLHITLNKKIGGGHQRYFNIVTVSRDFIIHFQGFVNVFHNLLFMNFDRM
Sbjct: 1  MSNKFIFRSPFGLHITLNKKIGGGHQRYFNIVTVSRDFIIHFQGFVNVFHNLLFMNFDRM 60

Query: 61 ISEFRSEDFSSTVRI 76
          ISEFRSEDFSST R+
Sbjct: 61 ISEFRSEDFSSTNRL 75

The following BLAST results are available for this feature:
BLAST of CsGy2G011110 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61675.12.5e-3397.33hypothetical protein Csa_2G223660 [Cucumis sativus][more]
BLAST of CsGy2G011110 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy2G011110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy2G011110 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LIC9|A0A0A0LIC9_CUCSA1.7e-3397.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G223660 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G011110.1CsGy2G011110.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy2G011110Csa2G223660Cucumber (Chinese Long) v2cgybcuB056
CsGy2G011110CsaV3_2G013540Cucumber (Chinese Long) v3cgybcucB064
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G011110Wild cucumber (PI 183967)cgybcpiB056
CsGy2G011110Wild cucumber (PI 183967)cgybcpiB065
CsGy2G011110Wild cucumber (PI 183967)cgybcpiB066
CsGy2G011110Silver-seed gourdcarcgybB0243
CsGy2G011110Silver-seed gourdcarcgybB0332
CsGy2G011110Silver-seed gourdcarcgybB0744
CsGy2G011110Silver-seed gourdcarcgybB0837
CsGy2G011110Silver-seed gourdcarcgybB0945
CsGy2G011110Cucumber (Chinese Long) v3cgybcucB069
CsGy2G011110Cucumber (Chinese Long) v3cgybcucB070
CsGy2G011110Watermelon (97103) v2cgybwmbB124
CsGy2G011110Wax gourdcgybwgoB120
CsGy2G011110Wax gourdcgybwgoB136
CsGy2G011110Wax gourdcgybwgoB143
CsGy2G011110Cucumber (Gy14) v2cgybcgybB045
CsGy2G011110Cucurbita maxima (Rimu)cgybcmaB188
CsGy2G011110Cucurbita maxima (Rimu)cgybcmaB193
CsGy2G011110Cucurbita maxima (Rimu)cgybcmaB226
CsGy2G011110Cucurbita maxima (Rimu)cgybcmaB262
CsGy2G011110Cucurbita maxima (Rimu)cgybcmaB268
CsGy2G011110Cucurbita moschata (Rifu)cgybcmoB181
CsGy2G011110Cucurbita moschata (Rifu)cgybcmoB186
CsGy2G011110Cucurbita moschata (Rifu)cgybcmoB247
CsGy2G011110Cucurbita moschata (Rifu)cgybcmoB254
CsGy2G011110Cucurbita pepo (Zucchini)cgybcpeB175
CsGy2G011110Cucurbita pepo (Zucchini)cgybcpeB190
CsGy2G011110Cucurbita pepo (Zucchini)cgybcpeB203
CsGy2G011110Cucurbita pepo (Zucchini)cgybcpeB231
CsGy2G011110Cucurbita pepo (Zucchini)cgybcpeB249
CsGy2G011110Cucurbita pepo (Zucchini)cgybcpeB278
CsGy2G011110Cucumber (Chinese Long) v2cgybcuB064
CsGy2G011110Cucumber (Chinese Long) v2cgybcuB065
CsGy2G011110Bottle gourd (USVL1VR-Ls)cgyblsiB080
CsGy2G011110Bottle gourd (USVL1VR-Ls)cgyblsiB115
CsGy2G011110Melon (DHL92) v3.5.1cgybmeB123
CsGy2G011110Melon (DHL92) v3.5.1cgybmeB118
CsGy2G011110Melon (DHL92) v3.5.1cgybmeB126
CsGy2G011110Melon (DHL92) v3.6.1cgybmedB116
CsGy2G011110Melon (DHL92) v3.6.1cgybmedB121
CsGy2G011110Melon (DHL92) v3.6.1cgybmedB124
CsGy2G011110Watermelon (Charleston Gray)cgybwcgB129
CsGy2G011110Watermelon (97103) v1cgybwmB114
CsGy2G011110Watermelon (97103) v1cgybwmB117