CsGy2G010690 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G010690
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	acidic endochitinase-like
Location	Chr2 : 10522696 .. 10523222 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTTTGATCATCTGCCCAAAAATGGCGTTATTATTTTTACTCTTCTTCTCTCTGTTCGTCGTCTCCACAATCAGCAACCTCCAGGTCGGAGTTTACTGGGGATAGGGTGTCTATGAAGGCAGCCTGATTGATGCTTGCTCTACCGGAATTAACACATTATCAGCGTAGCTTTCCTTGATTCATTTGGTGTAGATAAACTCCGAAGCTTTATTTAGCCACCCACTGCAATCTAACCACAAACGACTGTACTAAATTGAACAAAGAAATTAAGCCATGTCAAGCATTGGGCATCAAGATTTTCCTCTCCACAGGCGGCCTTTTCGGTGGCTATTCACGAATTTCCCCCGCTGATGCCAGAAAATACACCTTATATTTATGGAACAATTTCATCGGTGGTGAATCAAGTTCCCATCCTTTTGGTTACGCCGTATTGGACGGCATCGAATTCGCTTACGCAAGGGTACTATCAACAAATGAAGGAGATATCAGCAAATGGGAAAACGTAATAAATATTGAACGATAA

mRNA sequence

ATGATGTTTGATCATCTGCCCAAAAATGGCGTTATTATTTTTACTCTTCTTCTCTCTGTTCGTCGTCTCCACAATCAGCAACCTCCAGCCACCCACTGCAATCTAACCACAAACGACTGTACTAAATTGAACAAAGAAATTAAGCCATGTCAAGCATTGGGCATCAAGATTTTCCTCTCCACAGGCGGCCTTTTCGGTGGCTATTCACGAATTTCCCCCGCTGATGCCAGAAAATACACCTTATATTTATGGAACAATTTCATCGGTGGTGAATCAAGTTCCCATCCTTTTGGTTACGCCGTATTGGACGGCATCGAATTCGCTTACGCAAGGGTACTATCAACAAATGAAGGAGATATCAGCAAATGGGAAAACGTAATAAATATTGAACGATAA

Coding sequence (CDS)

ATGATGTTTGATCATCTGCCCAAAAATGGCGTTATTATTTTTACTCTTCTTCTCTCTGTTCGTCGTCTCCACAATCAGCAACCTCCAGCCACCCACTGCAATCTAACCACAAACGACTGTACTAAATTGAACAAAGAAATTAAGCCATGTCAAGCATTGGGCATCAAGATTTTCCTCTCCACAGGCGGCCTTTTCGGTGGCTATTCACGAATTTCCCCCGCTGATGCCAGAAAATACACCTTATATTTATGGAACAATTTCATCGGTGGTGAATCAAGTTCCCATCCTTTTGGTTACGCCGTATTGGACGGCATCGAATTCGCTTACGCAAGGGTACTATCAACAAATGAAGGAGATATCAGCAAATGGGAAAACGTAATAAATATTGAACGATAA

Protein sequence

MMFDHLPKNGVIIFTLLLSVRRLHNQQPPATHCNLTTNDCTKLNKEIKPCQALGIKIFLSTGGLFGGYSRISPADARKYTLYLWNNFIGGESSSHPFGYAVLDGIEFAYARVLSTNEGDISKWENVINIER

Homology

[Close]

BLAST of CsGy2G010690 vs. NCBI nr
Match: KGN61633.1 (hypothetical protein Csa_2G193370 [Cucumis sativus])

HSP 1 Score: 269.6 bits (688), Expect = 5.5e-69
Identity = 129/132 (97.73%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 2   MFDHLPKNGVIIFTLLLSVRRLHNQQPP--ATHCNLTTNDCTKLNKEIKPCQALGIKIFL 61
           MFDHLPKNGVIIFTLLLSVRRLHNQQPP   THCNLTTNDCTKLNKEIKPCQALGIKIFL
Sbjct: 1   MFDHLPKNGVIIFTLLLSVRRLHNQQPPGRTTHCNLTTNDCTKLNKEIKPCQALGIKIFL 60

Query: 62  STGGLFGGYSRISPADARKYTLYLWNNFIGGESSSHPFGYAVLDGIEFAYARVLSTNEGD 121
           STGGLFGGYSRISPADARKYTLYLWNNFIGGESSSHPFGYAVLDGIEFAYARVLSTNEGD
Sbjct: 61  STGGLFGGYSRISPADARKYTLYLWNNFIGGESSSHPFGYAVLDGIEFAYARVLSTNEGD 120

Query: 122 ISKWENVINIER 132
           ISKWENVINIER
Sbjct: 121 ISKWENVINIER 132

[Close]

BLAST of CsGy2G010690 vs. NCBI nr
Match: GAU39775.1 (hypothetical protein TSUD_220190 [Trifolium subterraneum])

HSP 1 Score: 109.4 bits (272), Expect = 9.5e-21
Identity = 55/119 (46.22%), Postives = 72/119 (60.50%), Query Frame = 0


Query: 14  FTLLLSVRRLHNQQPP----ATHCNLTTNDCTKLNKEIKPCQALGIKIFLSTGGLFGGYS 73
           F +L  +    N Q P    A HC+  +N CTKL  +IK CQA GIK+ LS GG  GGYS
Sbjct: 51  FVILAFLPTFGNGQKPMINLAGHCDPYSNTCTKLTSDIKSCQAKGIKVLLSIGGAAGGYS 110

Query: 74  RISPADARKYTLYLWNNFIGGESSSHPFGYAVLDGIEFAYARVLSTNEGDISKWENVIN 129
            +S  DA++   YLWNNF+GG+SSS P G AVLDGI+F      +    D++++  V N
Sbjct: 111 LVSSQDAKQVATYLWNNFLGGQSSSRPLGPAVLDGIDFDIEGGTNLYWDDLARYLKVYN 169

[Close]

BLAST of CsGy2G010690 vs. NCBI nr
Match: XP_009368700.1 (PREDICTED: hevamine-A-like [Pyrus x bretschneideri])

HSP 1 Score: 107.8 bits (268), Expect = 2.8e-20
Identity = 52/87 (59.77%), Postives = 61/87 (70.11%), Query Frame = 0


Query: 25  NQQPPAT----HCNLTTNDCTKLNKEIKPCQALGIKIFLSTGGLFGGYSRISPADARKYT 84
           N Q PA     HC+ TT++CTKL+ EIK CQA GIK+ LS GG  G YS  S  DAR+  
Sbjct: 64  NGQTPAINLAGHCDPTTDECTKLSPEIKSCQAKGIKVILSIGGASGSYSLTSADDARQVA 123

Query: 85  LYLWNNFIGGESSSHPFGYAVLDGIEF 108
            YLWNNF+GG+SSS P G AVLDGI+F
Sbjct: 124 TYLWNNFLGGQSSSRPLGAAVLDGIDF 150

[Close]

BLAST of CsGy2G010690 vs. NCBI nr
Match: XP_008376664.1 (PREDICTED: hevamine-A-like [Malus domestica])

HSP 1 Score: 107.5 bits (267), Expect = 3.6e-20
Identity = 52/87 (59.77%), Postives = 60/87 (68.97%), Query Frame = 0


Query: 25  NQQPPAT----HCNLTTNDCTKLNKEIKPCQALGIKIFLSTGGLFGGYSRISPADARKYT 84
           N Q PA     HC+ TT +CTKL+ EIK CQA GIK+ LS GG  G YS  S  DAR+  
Sbjct: 64  NGQTPAINLAGHCDPTTEECTKLSPEIKSCQAKGIKVILSIGGASGSYSLTSADDARQVA 123

Query: 85  LYLWNNFIGGESSSHPFGYAVLDGIEF 108
            YLWNNF+GG+SSS P G AVLDGI+F
Sbjct: 124 TYLWNNFLGGQSSSRPLGAAVLDGIDF 150

[Close]

BLAST of CsGy2G010690 vs. NCBI nr
Match: XP_008376668.1 (PREDICTED: hevamine-A-like [Malus domestica])

HSP 1 Score: 107.5 bits (267), Expect = 3.6e-20
Identity = 49/78 (62.82%), Postives = 58/78 (74.36%), Query Frame = 0


Query: 30  ATHCNLTTNDCTKLNKEIKPCQALGIKIFLSTGGLFGGYSRISPADARKYTLYLWNNFIG 89
           A HC+ TT++CTKL+ EI+ CQA GIK+ LS GG  G YS  S ADAR+   YLWNNF+G
Sbjct: 72  AGHCDPTTDECTKLSPEIRSCQAKGIKVILSIGGASGSYSLTSAADARQVATYLWNNFLG 131

Query: 90  GESSSHPFGYAVLDGIEF 108
           G SSS P G AVLDGI+F
Sbjct: 132 GHSSSRPLGAAVLDGIDF 149

[Close]

BLAST of CsGy2G010690 vs. TAIR10
Match: AT5G24090.1 (chitinase A)

HSP 1 Score: 93.2 bits (230), Expect = 1.3e-19
Identity = 43/78 (55.13%), Postives = 51/78 (65.38%), Query Frame = 0


Query: 30  ATHCNLTTNDCTKLNKEIKPCQALGIKIFLSTGGLFGGYSRISPADARKYTLYLWNNFIG 89
           A HCN   N CT    ++K CQ+ GIK+ LS GG  G YS  S  DA+    YLWNNF+G
Sbjct: 76  AGHCNPAANTCTHFGSQVKDCQSRGIKVMLSLGGGIGNYSIGSREDAKVIADYLWNNFLG 135

Query: 90  GESSSHPFGYAVLDGIEF 108
           G+SSS P G AVLDGI+F
Sbjct: 136 GKSSSRPLGDAVLDGIDF 153

[Close]

BLAST of CsGy2G010690 vs. Swiss-Prot
Match: sp|P36908|CHIA_CICAR (Acidic endochitinase OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-18
Identity = 44/78 (56.41%), Postives = 53/78 (67.95%), Query Frame = 0


Query: 30  ATHCNLTTNDCTKLNKEIKPCQALGIKIFLSTGGLFGGYSRISPADARKYTLYLWNNFIG 89
           A HC+ +TN CTK + EI+ CQA GIK+ LS GG  G YS  S  +A     YLWNNF+G
Sbjct: 70  AGHCDPSTNGCTKFSPEIQACQAKGIKVLLSLGGGAGSYSLNSAEEATTLANYLWNNFLG 129

Query: 90  GESSSHPFGYAVLDGIEF 108
           G S+S P G AVLDGI+F
Sbjct: 130 GTSTSRPLGDAVLDGIDF 147

[Close]

BLAST of CsGy2G010690 vs. Swiss-Prot
Match: sp|P19172|CHIA_ARATH (Acidic endochitinase OS=Arabidopsis thaliana OX=3702 GN=CHIB1 PE=2 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 2.3e-18
Identity = 43/78 (55.13%), Postives = 51/78 (65.38%), Query Frame = 0


Query: 30  ATHCNLTTNDCTKLNKEIKPCQALGIKIFLSTGGLFGGYSRISPADARKYTLYLWNNFIG 89
           A HCN   N CT    ++K CQ+ GIK+ LS GG  G YS  S  DA+    YLWNNF+G
Sbjct: 76  AGHCNPAANTCTHFGSQVKDCQSRGIKVMLSLGGGIGNYSIGSREDAKVIADYLWNNFLG 135

Query: 90  GESSSHPFGYAVLDGIEF 108
           G+SSS P G AVLDGI+F
Sbjct: 136 GKSSSRPLGDAVLDGIDF 153

[Close]

BLAST of CsGy2G010690 vs. Swiss-Prot
Match: sp|P51614|CHIT3_VITVI (Acidic endochitinase OS=Vitis vinifera OX=29760 GN=CHIT3 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.0e-18
Identity = 46/92 (50.00%), Postives = 57/92 (61.96%), Query Frame = 0


Query: 20  VRRLHNQQPP----ATHCNLTTNDCTKLNKEIKPCQALGIKIFLSTGGLFGGYSRISPAD 79
           + +  N Q P    A HCN  +N CT ++  I+ CQ  GIK+ LS GG  G YS  S  D
Sbjct: 58  LNKFGNGQTPEINLAGHCNPASNGCTSVSTGIRNCQNRGIKVMLSIGGGAGSYSLSSSND 117

Query: 80  ARKYTLYLWNNFIGGESSSHPFGYAVLDGIEF 108
           A+    YLWNNF+GG+SSS P G AVLDGI+F
Sbjct: 118 AQNVANYLWNNFLGGQSSSRPLGDAVLDGIDF 149

[Close]

BLAST of CsGy2G010690 vs. Swiss-Prot
Match: sp|P23472|CHLY_HEVBR (Hevamine-A OS=Hevea brasiliensis OX=3981 PE=1 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 5.1e-18
Identity = 45/92 (48.91%), Postives = 56/92 (60.87%), Query Frame = 0


Query: 20  VRRLHNQQPP----ATHCNLTTNDCTKLNKEIKPCQALGIKIFLSTGGLFGGYSRISPAD 79
           + +  N Q P    A HCN     CT ++  I+ CQ  GIK+ LS GG  G Y+  S AD
Sbjct: 59  LNKFGNGQTPQINLAGHCNPAAGGCTIVSNGIRSCQIQGIKVMLSLGGGIGSYTLASQAD 118

Query: 80  ARKYTLYLWNNFIGGESSSHPFGYAVLDGIEF 108
           A+    YLWNNF+GG+SSS P G AVLDGI+F
Sbjct: 119 AKNVADYLWNNFLGGKSSSRPLGDAVLDGIDF 150

[Close]

BLAST of CsGy2G010690 vs. Swiss-Prot
Match: sp|P36910|CHIE_BETVU (Acidic endochitinase SE2 OS=Beta vulgaris OX=161934 GN=SE2 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 6.7e-18
Identity = 50/115 (43.48%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 16  LLLSVRRLHNQQPPAT----HCNLTTNDCTKLNKEIKPCQALGIKIFLSTGGLFGGYSRI 75
           +L  V    N Q PA     HC+  TN C  L+ +IK CQ  GIK+ LS GG  GGYS  
Sbjct: 54  ILAFVATFGNGQTPALNLAGHCDPATN-CNSLSSDIKTCQQAGIKVLLSIGGGAGGYSLS 113

Query: 76  SPADARKYTLYLWNNFIGGESSSHPFGYAVLDGIEFAYARVLSTNEGDISKWENV 127
           S  DA  +  YLWN ++GG+SS+ P G AVLDGI+F          GD   W+++
Sbjct: 114 STDDANTFADYLWNTYLGGQSSTRPLGDAVLDGIDF------DIESGDGRFWDDL 161

[Close]

BLAST of CsGy2G010690 vs. TrEMBL
Match: tr|A0A0A0LIK8|A0A0A0LIK8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G193370 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 3.6e-69
Identity = 129/132 (97.73%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 2   MFDHLPKNGVIIFTLLLSVRRLHNQQPP--ATHCNLTTNDCTKLNKEIKPCQALGIKIFL 61
           MFDHLPKNGVIIFTLLLSVRRLHNQQPP   THCNLTTNDCTKLNKEIKPCQALGIKIFL
Sbjct: 1   MFDHLPKNGVIIFTLLLSVRRLHNQQPPGRTTHCNLTTNDCTKLNKEIKPCQALGIKIFL 60

Query: 62  STGGLFGGYSRISPADARKYTLYLWNNFIGGESSSHPFGYAVLDGIEFAYARVLSTNEGD 121
           STGGLFGGYSRISPADARKYTLYLWNNFIGGESSSHPFGYAVLDGIEFAYARVLSTNEGD
Sbjct: 61  STGGLFGGYSRISPADARKYTLYLWNNFIGGESSSHPFGYAVLDGIEFAYARVLSTNEGD 120

Query: 122 ISKWENVINIER 132
           ISKWENVINIER
Sbjct: 121 ISKWENVINIER 132

[Close]

BLAST of CsGy2G010690 vs. TrEMBL
Match: tr|A0A2K3N2S6|A0A2K3N2S6_TRIPR (Acidic endochitinase-like protein OS=Trifolium pratense OX=57577 GN=L195_g020558 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.4e-20
Identity = 54/119 (45.38%), Postives = 71/119 (59.66%), Query Frame = 0


Query: 14  FTLLLSVRRLHNQQPP----ATHCNLTTNDCTKLNKEIKPCQALGIKIFLSTGGLFGGYS 73
           F +L  +    N Q P    A HC+  +N CTKL  +IK CQA GIK+ LS GG  GGYS
Sbjct: 51  FVILAFLPTFGNGQKPMINLAGHCDPYSNTCTKLTSDIKSCQAKGIKVLLSIGGAAGGYS 110

Query: 74  RISPADARKYTLYLWNNFIGGESSSHPFGYAVLDGIEFAYARVLSTNEGDISKWENVIN 129
            +S  DA++   YLWNNF+GG+S S P G AVLDGI+F      +    D++++  V N
Sbjct: 111 LVSSQDAKQVATYLWNNFLGGQSPSRPLGPAVLDGIDFDIEGGTNLYWDDLARYLKVYN 169

[Close]

BLAST of CsGy2G010690 vs. TrEMBL
Match: tr|Q9FUD7|Q9FUD7_MALDO (Class III acidic chitinase OS=Malus domestica OX=3750 GN=Chi1 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.4e-20
Identity = 52/87 (59.77%), Postives = 60/87 (68.97%), Query Frame = 0


Query: 25  NQQPPAT----HCNLTTNDCTKLNKEIKPCQALGIKIFLSTGGLFGGYSRISPADARKYT 84
           N Q PA     HC+ TT +CTKL+ EIK CQA GIK+ LS GG  G YS  S  DAR+  
Sbjct: 64  NGQTPAINLAGHCDPTTEECTKLSPEIKSCQAKGIKVILSIGGASGSYSLTSADDARQVA 123

Query: 85  LYLWNNFIGGESSSHPFGYAVLDGIEF 108
            YLWNNF+GG+SSS P G AVLDGI+F
Sbjct: 124 TYLWNNFLGGQSSSRPLGAAVLDGIDF 150

[Close]

BLAST of CsGy2G010690 vs. TrEMBL
Match: tr|A0A1S4E536|A0A1S4E536_CUCME (hevamine-A-like OS=Cucumis melo OX=3656 GN=LOC107992136 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.3e-20
Identity = 56/109 (51.38%), Postives = 65/109 (59.63%), Query Frame = 0


Query: 12  IIFTLLLSVRRLHNQQPPATHCNLTTNDCTKLNKEIKPCQALGIKIFLSTGGLFGGYSRI 71
           +  TLLLSVRRLHNQQ P                                GG+FGGY++I
Sbjct: 4   LFLTLLLSVRRLHNQQHP--------------------------------GGIFGGYTQI 63

Query: 72  SPADARKYTLYLWNNFIGGESSSHPFGYAVLDGIEFAYARVLSTNEGDI 121
           SPADA  YTLYLW+NF+GGESSS P G AV+DGI+FAY   L+ NEGDI
Sbjct: 64  SPADATNYTLYLWDNFLGGESSSRPLGDAVVDGIDFAYTWELTANEGDI 80

[Close]

BLAST of CsGy2G010690 vs. TrEMBL
Match: tr|A0A1S3CNC0|A0A1S3CNC0_CUCME (acidic endochitinase-like OS=Cucumis melo OX=3656 GN=LOC103502852 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 6.9e-20
Identity = 53/91 (58.24%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 32  HCNLTTNDCTKLNKEIKPCQALGIKIFLSTGGLFGGYSR--ISPADARKYTLYLWNNFIG 91
           HC+ TT DCTKL+KEIK CQALGIK+FLS GG  G Y+    +  DA    LYLWNNF+G
Sbjct: 71  HCDPTTGDCTKLSKEIKSCQALGIKVFLSIGGGAGSYTLNFTNDDDATNDALYLWNNFLG 130

Query: 92  GESSSHPFGYAVLDGIEFAYARVLSTNEGDI 121
           G+SSS P G AVLDGI+F  A   S    D+
Sbjct: 131 GKSSSRPLGEAVLDGIDFVAAWDQSAKHRDM 161

The following BLAST results are available for this feature:

BLAST of CsGy2G010690 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61633.1	5.5e-69	97.73	hypothetical protein Csa_2G193370 [Cucumis sativus]	[more]
GAU39775.1	9.5e-21	46.22	hypothetical protein TSUD_220190 [Trifolium subterraneum]	[more]
XP_009368700.1	2.8e-20	59.77	PREDICTED: hevamine-A-like [Pyrus x bretschneideri]	[more]
XP_008376664.1	3.6e-20	59.77	PREDICTED: hevamine-A-like [Malus domestica]	[more]
XP_008376668.1	3.6e-20	62.82	PREDICTED: hevamine-A-like [Malus domestica]	[more]

BLAST of CsGy2G010690 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G24090.1	1.3e-19	55.13	chitinase A	[more]

BLAST of CsGy2G010690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P36908\|CHIA_CICAR	1.8e-18	56.41	Acidic endochitinase OS=Cicer arietinum OX=3827 PE=2 SV=1	[more]
sp\|P19172\|CHIA_ARATH	2.3e-18	55.13	Acidic endochitinase OS=Arabidopsis thaliana OX=3702 GN=CHIB1 PE=2 SV=2	[more]
sp\|P51614\|CHIT3_VITVI	3.0e-18	50.00	Acidic endochitinase OS=Vitis vinifera OX=29760 GN=CHIT3 PE=2 SV=1	[more]
sp\|P23472\|CHLY_HEVBR	5.1e-18	48.91	Hevamine-A OS=Hevea brasiliensis OX=3981 PE=1 SV=2	[more]
sp\|P36910\|CHIE_BETVU	6.7e-18	43.48	Acidic endochitinase SE2 OS=Beta vulgaris OX=161934 GN=SE2 PE=1 SV=1	[more]

BLAST of CsGy2G010690 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LIK8\|A0A0A0LIK8_CUCSA	3.6e-69	97.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G193370 PE=4 SV=1	[more]
tr\|A0A2K3N2S6\|A0A2K3N2S6_TRIPR	2.4e-20	45.38	Acidic endochitinase-like protein OS=Trifolium pratense OX=57577 GN=L195_g020558...	[more]
tr\|Q9FUD7\|Q9FUD7_MALDO	2.4e-20	59.77	Class III acidic chitinase OS=Malus domestica OX=3750 GN=Chi1 PE=3 SV=1	[more]
tr\|A0A1S4E536\|A0A1S4E536_CUCME	5.3e-20	51.38	hevamine-A-like OS=Cucumis melo OX=3656 GN=LOC107992136 PE=4 SV=1	[more]
tr\|A0A1S3CNC0\|A0A1S3CNC0_CUCME	6.9e-20	58.24	acidic endochitinase-like OS=Cucumis melo OX=3656 GN=LOC103502852 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR017853	Glycoside_hydrolase_SF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G010690.1	CsGy2G010690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.20.20.80		coord: 11..129 e-value: 3.6E-18 score: 68.0
None	No IPR available	PANTHER	PTHR11177	CHITINASE	coord: 30..111
None	No IPR available	PANTHER	PTHR11177:SF225	ACIDIC ENDOCHITINASE	coord: 30..111
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	SSF51445	(Trans)glycosidases	coord: 29..109

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G010690	Csa2G193370	Cucumber (Chinese Long) v2	cgybcuB056

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G010690	Cucumber (Chinese Long) v3	cgybcucB064
CsGy2G010690	Cucumber (Chinese Long) v3	cgybcucB070
CsGy2G010690	Watermelon (97103) v2	cgybwmbB122
CsGy2G010690	Watermelon (97103) v2	cgybwmbB124
CsGy2G010690	Watermelon (97103) v2	cgybwmbB141
CsGy2G010690	Watermelon (97103) v2	cgybwmbB148
CsGy2G010690	Wax gourd	cgybwgoB117
CsGy2G010690	Wax gourd	cgybwgoB122
CsGy2G010690	Cucumber (Gy14) v2	cgybcgybB045
CsGy2G010690	Cucurbita maxima (Rimu)	cgybcmaB188
CsGy2G010690	Cucurbita maxima (Rimu)	cgybcmaB193
CsGy2G010690	Cucurbita maxima (Rimu)	cgybcmaB214
CsGy2G010690	Cucurbita maxima (Rimu)	cgybcmaB226
CsGy2G010690	Cucurbita maxima (Rimu)	cgybcmaB262
CsGy2G010690	Cucurbita maxima (Rimu)	cgybcmaB268
CsGy2G010690	Cucurbita moschata (Rifu)	cgybcmoB181
CsGy2G010690	Cucurbita moschata (Rifu)	cgybcmoB186
CsGy2G010690	Cucurbita moschata (Rifu)	cgybcmoB247
CsGy2G010690	Cucurbita moschata (Rifu)	cgybcmoB254
CsGy2G010690	Cucurbita pepo (Zucchini)	cgybcpeB175
CsGy2G010690	Cucurbita pepo (Zucchini)	cgybcpeB191
CsGy2G010690	Cucurbita pepo (Zucchini)	cgybcpeB203
CsGy2G010690	Cucurbita pepo (Zucchini)	cgybcpeB231
CsGy2G010690	Cucurbita pepo (Zucchini)	cgybcpeB249
CsGy2G010690	Cucurbita pepo (Zucchini)	cgybcpeB278
CsGy2G010690	Cucumber (Chinese Long) v2	cgybcuB065
CsGy2G010690	Bottle gourd (USVL1VR-Ls)	cgyblsiB080
CsGy2G010690	Bottle gourd (USVL1VR-Ls)	cgyblsiB115
CsGy2G010690	Bottle gourd (USVL1VR-Ls)	cgyblsiB117
CsGy2G010690	Melon (DHL92) v3.5.1	cgybmeB122
CsGy2G010690	Melon (DHL92) v3.5.1	cgybmeB126
CsGy2G010690	Melon (DHL92) v3.6.1	cgybmedB120
CsGy2G010690	Melon (DHL92) v3.6.1	cgybmedB124
CsGy2G010690	Watermelon (Charleston Gray)	cgybwcgB129
CsGy2G010690	Watermelon (Charleston Gray)	cgybwcgB143
CsGy2G010690	Watermelon (Charleston Gray)	cgybwcgB149
CsGy2G010690	Watermelon (97103) v1	cgybwmB114
CsGy2G010690	Watermelon (97103) v1	cgybwmB117
CsGy2G010690	Watermelon (97103) v1	cgybwmB163
CsGy2G010690	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G010690	Wild cucumber (PI 183967)	cgybcpiB066
CsGy2G010690	Silver-seed gourd	carcgybB0243
CsGy2G010690	Silver-seed gourd	carcgybB0250
CsGy2G010690	Silver-seed gourd	carcgybB0332
CsGy2G010690	Silver-seed gourd	carcgybB0745
CsGy2G010690	Silver-seed gourd	carcgybB0945