CsGy2G010440 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G010440
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr2 : 10188824 .. 10189650 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATTTGCAATTGCAATGGTGCTTCTCACTGCTGAGACTGCAACAGAGGCTCACCGGCCAACGCTGACTCAAAATGATCCGAAAATGAATTCGTTGGTGGGTGAATCATAATCGTGACAAAATTACCAATCCTTCCCATGGAGGAAAAGGGTGCAAGAAAGGCCCACATTCCAACTGCAAGCAACACCATGGCTGACTCAGAAGGGCCTTTTTCTGACGAGATTAGGCCATGCTGTTGGGGAGAACTAAATAAAACTACTGCATGCAAAAGCCTATATTGGCTTCCCTCAAATATTATCCATGGTTTCTGAATATTGTAATCTAATGTTTGTGTGTTGAAGTTGGCGTCTTTATAATATGGTTGTTTGTTGTGAGATCTAATATCTATATATGCTTTTCTTTTGTTTTTGGCAATTCTAGCAAGATCTTTAGCTTACCTCCTGACCTTCTTTTTTTTCTCTCTCCAAAATTTGCTAATGGTAACTTCAGACCATGAAAGTACACACTAACTGTTCTGTAGAACACTGTTCTGACAACTTGTTAGTACTCAAGTATTTCTACATTTCCAGTTACTTACAACTAATTATTAAATGTCTAACCAAAAAGCTTCTTGCTTTAATTTGGATAATCTCAAGCTATATGAATAGAGGAAAAGCTACTTTAGTGTTTTATATCATAATTATTATTACAATTGTGTCATCATGTAATTAGCACTCTTATTTTTTTATTTCTTCTCTTTATAGCCTTTATTGGGTTTTGTTGCTAAAGATATCACCATCTTCATCACATATATGCAAACCTGTTTCTCCCTCATTTATCAATAA

mRNA sequence

ATGGTATTTGCAATTGCAATGGTGCTTCTCACTGCTGAGACTGCAACAGAGGCTCACCGGCCAACGCTGACTCAAAATGATCCGAAAATGAATTCGTTGCCTTTATTGGGTTTTGTTGCTAAAGATATCACCATCTTCATCACATATATGCAAACCTGTTTCTCCCTCATTTATCAATAA

Coding sequence (CDS)

ATGGTATTTGCAATTGCAATGGTGCTTCTCACTGCTGAGACTGCAACAGAGGCTCACCGGCCAACGCTGACTCAAAATGATCCGAAAATGAATTCGTTGCCTTTATTGGGTTTTGTTGCTAAAGATATCACCATCTTCATCACATATATGCAAACCTGTTTCTCCCTCATTTATCAATAA

Protein sequence

MVFAIAMVLLTAETATEAHRPTLTQNDPKMNSLPLLGFVAKDITIFITYMQTCFSLIYQ
Homology
[Close]
BLAST of CsGy2G010440 vs. NCBI nr
Match: KGN61603.1 (hypothetical protein Csa_2G176170 [Cucumis sativus])

HSP 1 Score: 58.9 bits (141), Expect = 6.6e-06
Identity = 29/33 (87.88%), Postives = 31/33 (93.94%), Query Frame = 0 

Query: 1  MVFAIAMVLLTAETATEAHRPTLTQNDPKMNSL 34
          MVFAIAMVLLTAETATEAHRPTLT NDP+M S+
Sbjct: 7  MVFAIAMVLLTAETATEAHRPTLTPNDPEMKSM 39

[Close]
BLAST of CsGy2G010440 vs. TrEMBL
Match: tr|A0A0A0LII8|A0A0A0LII8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176170 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 4.4e-06
Identity = 29/33 (87.88%), Postives = 31/33 (93.94%), Query Frame = 0 

Query: 1  MVFAIAMVLLTAETATEAHRPTLTQNDPKMNSL 34
          MVFAIAMVLLTAETATEAHRPTLT NDP+M S+
Sbjct: 7  MVFAIAMVLLTAETATEAHRPTLTPNDPEMKSM 39

The following BLAST results are available for this feature:
BLAST of CsGy2G010440 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61603.16.6e-0687.88hypothetical protein Csa_2G176170 [Cucumis sativus][more]
BLAST of CsGy2G010440 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy2G010440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy2G010440 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LII8|A0A0A0LII8_CUCSA4.4e-0687.88Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176170 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G010440.1CsGy2G010440.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G010440Cucumber (Gy14) v2cgybcgybB045
CsGy2G010440Cucurbita maxima (Rimu)cgybcmaB188
CsGy2G010440Cucurbita maxima (Rimu)cgybcmaB193
CsGy2G010440Cucurbita maxima (Rimu)cgybcmaB214
CsGy2G010440Cucurbita maxima (Rimu)cgybcmaB226
CsGy2G010440Cucurbita maxima (Rimu)cgybcmaB262
CsGy2G010440Cucurbita maxima (Rimu)cgybcmaB268
CsGy2G010440Cucurbita moschata (Rifu)cgybcmoB181
CsGy2G010440Cucurbita moschata (Rifu)cgybcmoB186
CsGy2G010440Cucurbita moschata (Rifu)cgybcmoB206
CsGy2G010440Cucurbita moschata (Rifu)cgybcmoB219
CsGy2G010440Cucurbita moschata (Rifu)cgybcmoB247
CsGy2G010440Cucurbita moschata (Rifu)cgybcmoB254
CsGy2G010440Cucurbita pepo (Zucchini)cgybcpeB175
CsGy2G010440Cucurbita pepo (Zucchini)cgybcpeB191
CsGy2G010440Cucurbita pepo (Zucchini)cgybcpeB203
CsGy2G010440Cucurbita pepo (Zucchini)cgybcpeB231
CsGy2G010440Cucurbita pepo (Zucchini)cgybcpeB249
CsGy2G010440Cucurbita pepo (Zucchini)cgybcpeB278
CsGy2G010440Cucumber (Chinese Long) v2cgybcuB056
CsGy2G010440Cucumber (Chinese Long) v2cgybcuB065
CsGy2G010440Bottle gourd (USVL1VR-Ls)cgyblsiB080
CsGy2G010440Bottle gourd (USVL1VR-Ls)cgyblsiB115
CsGy2G010440Bottle gourd (USVL1VR-Ls)cgyblsiB117
CsGy2G010440Melon (DHL92) v3.5.1cgybmeB122
CsGy2G010440Melon (DHL92) v3.5.1cgybmeB126
CsGy2G010440Melon (DHL92) v3.6.1cgybmedB120
CsGy2G010440Melon (DHL92) v3.6.1cgybmedB124
CsGy2G010440Watermelon (Charleston Gray)cgybwcgB129
CsGy2G010440Watermelon (Charleston Gray)cgybwcgB143
CsGy2G010440Watermelon (Charleston Gray)cgybwcgB149
CsGy2G010440Watermelon (97103) v1cgybwmB114
CsGy2G010440Watermelon (97103) v1cgybwmB117
CsGy2G010440Watermelon (97103) v1cgybwmB163
CsGy2G010440Wild cucumber (PI 183967)cgybcpiB056
CsGy2G010440Wild cucumber (PI 183967)cgybcpiB066
CsGy2G010440Silver-seed gourdcarcgybB0243
CsGy2G010440Silver-seed gourdcarcgybB0250
CsGy2G010440Silver-seed gourdcarcgybB0745
CsGy2G010440Silver-seed gourdcarcgybB0770
CsGy2G010440Silver-seed gourdcarcgybB0945
CsGy2G010440Silver-seed gourdcarcgybB1056
CsGy2G010440Cucumber (Chinese Long) v3cgybcucB064
CsGy2G010440Cucumber (Chinese Long) v3cgybcucB070
CsGy2G010440Watermelon (97103) v2cgybwmbB124
CsGy2G010440Watermelon (97103) v2cgybwmbB141
CsGy2G010440Watermelon (97103) v2cgybwmbB148
CsGy2G010440Wax gourdcgybwgoB117
CsGy2G010440Wax gourdcgybwgoB137
CsGy2G010440Wax gourdcgybwgoB141