CsGy2G009630 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G009630
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionnuclear pore complex protein NUP160 isoform X4
LocationChr2 : 9109096 .. 9114567 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCTAACTCAAGCGATTTTGTCGAAGTTTGCGGATTGCAATTTGAATATTGTGGAAGTGCCTTCTAAGGATGCTGTTTTCGTGGGCCAAGCAAGTCAGTCTCTCCCCAACACCTATCAGGTGGGTTTTGCATGCGCTGAGACAGAACAGGTAAGTACCCTTCCTTTGGTTCCTTGTCCTCCAGTGGGTTCGAGAGAGATGCTGGAGTGTGCCCCCTCAATTTCTATCTTTCGTTCAATGCAACTTAAATAGAGGGTTGGTCAATTGGGGAATGAGTGTTTATATTATTCTCTTGTGTTTTTGAATCCTTATCCTTACTAGGGAGGTGTGAAGGAGGTGTAGGTTGTGGCTTACCCTTTGCGCCTGTTTCTTCTCTAGGAGAGAGGTGGTGGATGGTTAATCAAATGGCCCATGCTGTGGGAGTTAATTTAGGAGTTGTTGGAGTGCTTCCTTCCAATGTTGTCTCTATTGGGGATTCTTATGGTCTCAGAATGACTTGCCTAGTGAAAATAAAAGAATGGAGGGATGGGAGGCATTAGCTTTAGTGGGCATTAAGAAAGTGGAGGTTAGAGAAGGAAACACGATTAATGGAAACATTAAGGCGGATGGGAAGGGCGGAAGAAATAGAAAGAAATGCAGGGAAGGCAACAATAGGATGATGAGGGAATTAAAGAAATTGGATAGCTCGATTAATTATGGTGTAAGAGAGCCTTTTTAGAGGTAGGGTTTGCTAGGCCTAAATGTTGAAAATCGTTTCTTGGAATGTTAGGGGTATGGAGGGCCAAACTAAAGGAGGTTTGTGAAGGAAGTGCTTCGCCAAGAGGATTCAGACATAGTCATTTTGACCGAAACCAAAAGAACTGAATTTTATAGTTTGAGTGGCCAGTATCTGGAAATGTAGAAGGGTGGAATGGGAGGTGCTTGAATCTGAGGGTTTGTCTGATGGTATTTTGATGTGTGGAATTCAAGATCTTGTGTTGTCACTGAGGTGATCAAAGGAAGACATTCTTTGACTATAGCTTTTCTGGATGGTGATAGTGAAGAGTTCTGAGTTATTGGGATTTATGGCCCCCCGAGGATTAGAGGAAGGAATTTGTTCTAGGATGAGTTGGGAGATCTTTTTGGTTATCGTGGGCTAAGACGGTGTGTGGCGGGTGATTTTAATGTCGTCCGTTCCTATGATGAGAAAGCTTCCTGTGGGAGACTTGCTAGGTCTATGAGATGCTTCAATAAGTTTATTGATGACAGTGGCTTATTGGACCCACCTATGGATGGAGGTCAATTTTCCTAGGCTAATAGTAGGGTGACTATGAGAATTGATAGGGTTCTTTTGTTAGAAGCCTAGACAGAGAGGTTTGGGAATCCTAGGCTGTTAAGAGGGTCTAGCATCACTTCAGACCATTGGCCCATTACTTTAACGAATGGTATGCTCGAGTGGGGTCTGTTTCCTTTCAGGTTTGCTGTTTTTGAGAAAGAAAGGAAGAGAAAGTGGGAAAAAGTCTTCGAAGTCCTTGGATAATCTCTCATGGGCTTGGTTCAATTTGAAATTTGGCTCCCTTTAATCTTGTTCTAGAATTTTAAATGTTGAAGTGATGCTGGGTTTTCATAATCTCTTGACAGTGGTAAAGGGTAAAAGAGTTGTTGAAAGCAATGTTTCTAGAAGATGGTCATTGGAAGCTTTAGGAGATCATGTCTATGCTCTTAGTTGGTTCGTGATGACCCCCTATCATACATCAATATAGTATAAGGAAGAAGAAACAGAAGGGGACCACAAGGGAACGCACATGCGAAGGGGAATAGACTGAGGAGTTTGTTATTTCATAAGTCGGTTAGTATAAACAAAGTTAGAGAGGAAGAGGGAAAGTCAATCAGTCAGTTGAGATTTTAGGCTCATGCTCTTCGAATTGAGATCTTCTCATTTCAAATTCTTATAATTCGATTTTACATATAGAAGGAATAAAGATATCTTACTTGATTTCAAGAGTTCCATCAATTCGCCCTTAAAAGCACATTCACATTAATTCTCAGTTAATGCAGTCAAAACCATTTTCTTCATACTTTTGGTTTGAAAGGATTCAACGCATTTTTGGAGACAAGTCACTTCATTGTTTAGGCCGTTTTGAGATTGCTCAAGTCAAAGCCTCCTCTTGGTGTTTTCTTTGCAATCTTTTTATTAGACTATTCAATTCAATTCATTAGTTTAAAATGGTGTGCTTTGTTTCTTCTTCTTCTATTACTTAGCATGTAATCTTTGCAAAGTGTTCTTTGTACTTGATTTCATGTCTTGTTATTTATATTTTTGTTTTCTCTCCTTTATTGTATTTTGAGCAGTACGTCTCATTTCATTATTTCAATATTTCAATGGAGAGGCTTGTTTTCGTGTGAAAAAAGTAAAATTAGTGTTGTATTTTATTGCCGAATCTTTTGTTCTTATCCCTTTTTTTTTGGTCAAAATGATAGCGTTTTCTCTCATGAATAATAACTTGGTTTCTCATTAAAAAAATAATAGCATGGCTTCTTATTAAAGAAATGATAGCTGGGTTTATGCAGGGTCAAGTTGGCAGGAGCTGTGCAAGATATGGTAATATCTGAGGTCTGTGGAAGACAATTTCTGTTTGTTCTTCATTCTGATGGAAACTTACGAGTGTGGGATCTTTCATGCCATAGTAGGGTATTTAATCACTCTATGAACATTGCAACTATGGCAGGTACATTCTATTAGCCAAAACACCAGTAGATCAATAAGTTTTGTTTGTCCTTCTCAGAAGAAGATATGAGTGATTTGGATCCACATTTGGTTTTGAAATGGATAAATAATGAATTGACAAGTATAGTTTCCTTAAATATATGGCTTCACTTAAATTGTGTTCAAGACATCCCTAAGCCAATGAAAAATAAGAACATTCAAGCACAACGTAATTTCAACCGCTTGGAAATGAGGTGCTTGATTTCCAATTGGCTAAATTTGAGGCACCTTCATTACCCATTCCTTTCTGTAATAGATTCCCATTAGTCTTAACGAGACGATATCAAGTAATAGTAGGCCAAGTGAAAAGTGACAAATAAAATTTCATCTTCAAGAGACTTTTTGGTGTATGTGCATCTTGTAACATTAGCCCATCTTAAAAGACACTTTAACTTAAGAGTAGTAATTTTAGGCTTGTATGATACAAGAGCTATAGTGTTATATCATGTGAAGTGTGAACCAAAATGGAATGGAGCTCCTTCAAGAATGAAATCGCTTTTGAATTGAATATTGAATGGATACTGCGTTTCCAAAATTTTTGAATATTAAAACATGAAGGAAATTTCCGAAAAAATTCAATTGAATTGGAACTTGTCATCAAATGAACTTTATGACATTGCATTATTACGCTCACACTTCCCTTTCTTTTTCGGTTTTAGAAGCAAGGTTTGTTAGGTTGTGGGTGGGTCAAGCTAACACCGATAAGAGTACAATTTCTCTGGCGATTCTCTATAATCACCCGGTACTTTCTCATTTAGTTTTTCTATTTTAAATTAGTTTCCATGTAATTTATGTGGATTTCCTTCTTTTGGCATGAATTAACATAATATTTCCAACTCTTGCACAATTAATCTATTTTCTACAATGATTTATGGTTTATAGAGCTAAAAAATTTGGTGCAATGTTTTAATGTTCCCTAAAACTTGTACAATTAATCTATTTACTGCAAAGAGTTATAGTTTATAATGTTGTCTTTAATACATGGGCAAATGAAAGATGTGTACGAATGGACCTTTTTTTACTTTTTACTTTTCTTTTTGTAAAAAGCGAAGCTTTGGTTGAGAATAAAGGAGGAGCACAATTAAATATGAACTTGATTGTTGGATATAGTTATATGCTAAAATTAACTTTCAATGTCGGTGGCTGTATATAAACGTAGAAAGGAAAAGAAGAAAAAACTCTGAAAATGATGTTTTCTTCGATCAATTAGGCCATTTCTATTATTCTACTCTTTTTAAAAATTAACTCATTCCCATTAGTAGATTAATGTTGAGCATGTTTTCACAGTCAAATTTTATTCTTAATCCCACCACCTCCCCATTTATCTACTAATATTTACATAAATGTGAAGGAGGATCTTAGCTTGGAGACGATCTACATATATAGCTTACGTTTTAGTTGGGGAGATAGGGTCAGCCTATTGTTGGAGCCTTCAACACACAGTATTCCATTGAATCAGGTAGTTTCCATTGAATCAGTTAGTTGAAAATTAAAGGACATCTCATTTAATTTTGAGTTTTATGACTTCTTAAATTTTGTTAAATTGAGATGATTTTTGAGCTTGATAGTCATTACTCCAATTTTCATTAGGGTGGATGTCTCGACGTAAAACTTGCATATGATAAGATATGGGTCTTAAAGGATAACGCATTGATCTTTCTCGACTTGTTAGCTTCAGATGGTCATTCGTAAGTTTATCTGATAACCTTATTTTTATTTATTTATTTTTGGGTTTTTTTCTTTTTTTTTGATAAGAAACAAATAATTATATTCATGAACACGAAAGAAAACAGGGGGGTTGAGAAAAACCCTTCCCAAAAAATTATAGTAGATAAGGCCTTCCAGTTGTTAAAGATCATAGAAAAGCCGTAATTACAAAAGTGTTTGGTGTAATTTGTAGAATACCAAGAAGTGTGTTTTTTGAAATGGAAACTATCCTATTCATTAATAAAATGAAATGAGACTAATGCTCAAAGTACAATAGACTTGTACAAAAAGCTAGAAATTCTAAGGGACAACAAATTCAGAATCCATATACACGAACAAACAAAACCGAGGCTCAAGAGCTCTATAAACACCAAACAAGACATAAATCATCATGGGTTGGCCTAGTGGTAAAAAGGAGGCAGTCTCAATATCTAACTAAGAGGTCATGACTTCAATCCATGGTGGCCACCTACCTAGAAATTAATTTCCTATGAGTTTCCTTGCACCCAAATGTTGTATGATCAGACGGGTTGTCCCGTGAGATTAGTCGAGGTGCGCATAAGCTGGCCCGAACACTCACGAATATCAAAAAAGAAAAAAAACCAACAAGGCATAAAAACAAACGAAAAAATTGAATTAAAAACAATACAAATGAGATGGGAAAGGAACAAAAGTGCACTAAAAAACCAGAAACATGAAAGAGGAAATCTATGAAAAGCTTGGAGGAGATGCATCTGAAGGGGACCAACTGAAAGAGCTTAGCTACCACAAAACCCCAAACAATTATTTCATGAAAAATTCATTAACGAACACGGGTGCCCAACAACTTCCATGATTTTTAAAACACAATTGAGGTACCAATCTTGAGGAGAAGACTACTAAGCCTCTTAAATCTCACAGAAAGATCAACAAATGGGACAAAGCTAATATAGGATGCACTTCTCTGTTTATAGGATGAGGAAGCAAGCCATTTGATGGAGCATCTTCTGATGACAAAGCATATAGGCTATTACTGA

mRNA sequence

ATGATTCTAACTCAAGCGATTTTGTCGAAGTTTGCGGATTGCAATTTGAATATTGTGGAAGTGCCTTCTAAGGATGCTGTTTTCGTGGGCCAAGCAAGTCAGTCTCTCCCCAACACCTATCAGGTGGGTTTTGCATGCGCTGAGACAGAACAGAATGACTTGCCTAGTGAAAATAAAAGAATGGAGGGATGGGAGGCATTAGCTTTAGTGGGCATTAAGAAAGTGGAGGTTAGAGAAGGAAACACGATTAATGGAAACATTAAGGCGGATGGGAAGGGCGGAAGAAATAGAAAGAAATGCAGGGAAGGCAACAATAGGATGATGAGGGAATTAAAGAAATTGGATAGCTCGATTAATTATGGTTTTGAGTGGCCAGTATCTGGAAATGTAGAAGGGTGGAATGGGAGGGTCAAGTTGGCAGGAGCTGTGCAAGATATGGTAATATCTGAGGTCTGTGGAAGACAATTTCTGTTTGTTCTTCATTCTGATGGAAACTTACGAGTGTGGGATCTTTCATGCCATAGTAGGGTATTTAATCACTCTATGAACATTGCAACTATGGCAGAAGCAAGGTTTGTTAGGTTGTGGGTGGGTCAAGCTAACACCGATAAGAGTACAATTTCTCTGGCGATTCTCTATAATCACCCGGATGAGGAAGCAAGCCATTTGATGGAGCATCTTCTGATGACAAAGCATATAGGCTATTACTGA

Coding sequence (CDS)

ATGATTCTAACTCAAGCGATTTTGTCGAAGTTTGCGGATTGCAATTTGAATATTGTGGAAGTGCCTTCTAAGGATGCTGTTTTCGTGGGCCAAGCAAGTCAGTCTCTCCCCAACACCTATCAGGTGGGTTTTGCATGCGCTGAGACAGAACAGAATGACTTGCCTAGTGAAAATAAAAGAATGGAGGGATGGGAGGCATTAGCTTTAGTGGGCATTAAGAAAGTGGAGGTTAGAGAAGGAAACACGATTAATGGAAACATTAAGGCGGATGGGAAGGGCGGAAGAAATAGAAAGAAATGCAGGGAAGGCAACAATAGGATGATGAGGGAATTAAAGAAATTGGATAGCTCGATTAATTATGGTTTTGAGTGGCCAGTATCTGGAAATGTAGAAGGGTGGAATGGGAGGGTCAAGTTGGCAGGAGCTGTGCAAGATATGGTAATATCTGAGGTCTGTGGAAGACAATTTCTGTTTGTTCTTCATTCTGATGGAAACTTACGAGTGTGGGATCTTTCATGCCATAGTAGGGTATTTAATCACTCTATGAACATTGCAACTATGGCAGAAGCAAGGTTTGTTAGGTTGTGGGTGGGTCAAGCTAACACCGATAAGAGTACAATTTCTCTGGCGATTCTCTATAATCACCCGGATGAGGAAGCAAGCCATTTGATGGAGCATCTTCTGATGACAAAGCATATAGGCTATTACTGA

Protein sequence

MILTQAILSKFADCNLNIVEVPSKDAVFVGQASQSLPNTYQVGFACAETEQNDLPSENKRMEGWEALALVGIKKVEVREGNTINGNIKADGKGGRNRKKCREGNNRMMRELKKLDSSINYGFEWPVSGNVEGWNGRVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEARFVRLWVGQANTDKSTISLAILYNHPDEEASHLMEHLLMTKHIGYY
Homology
[Close]
BLAST of CsGy2G009630 vs. NCBI nr
Match: KGN61507.1 (hypothetical protein Csa_2G150000 [Cucumis sativus])

HSP 1 Score: 172.6 bits (436), Expect = 1.6e-39
Identity = 82/87 (94.25%), Postives = 85/87 (97.70%), Query Frame = 0 

Query: 132 GWNGRVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEAR 191
           G+  RVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEAR
Sbjct: 216 GFISRVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEAR 275

Query: 192 FVRLWVGQANTDKSTISLAILYNHPDE 219
           FVRLWVGQANTDKSTISLAILYNHP++
Sbjct: 276 FVRLWVGQANTDKSTISLAILYNHPED 302

[Close]
BLAST of CsGy2G009630 vs. NCBI nr
Match: XP_011649106.1 (PREDICTED: nuclear pore complex protein NUP160 isoform X1 [Cucumis sativus])

HSP 1 Score: 172.6 bits (436), Expect = 1.6e-39
Identity = 82/87 (94.25%), Postives = 85/87 (97.70%), Query Frame = 0 

Query: 132 GWNGRVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEAR 191
           G+  RVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEAR
Sbjct: 216 GFISRVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEAR 275

Query: 192 FVRLWVGQANTDKSTISLAILYNHPDE 219
           FVRLWVGQANTDKSTISLAILYNHP++
Sbjct: 276 FVRLWVGQANTDKSTISLAILYNHPED 302

[Close]
BLAST of CsGy2G009630 vs. NCBI nr
Match: XP_011649108.1 (PREDICTED: nuclear pore complex protein NUP160 isoform X3 [Cucumis sativus])

HSP 1 Score: 172.6 bits (436), Expect = 1.6e-39
Identity = 82/87 (94.25%), Postives = 85/87 (97.70%), Query Frame = 0 

Query: 132 GWNGRVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEAR 191
           G+  RVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEAR
Sbjct: 216 GFISRVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEAR 275

Query: 192 FVRLWVGQANTDKSTISLAILYNHPDE 219
           FVRLWVGQANTDKSTISLAILYNHP++
Sbjct: 276 FVRLWVGQANTDKSTISLAILYNHPED 302

[Close]
BLAST of CsGy2G009630 vs. NCBI nr
Match: XP_011649109.1 (PREDICTED: nuclear pore complex protein NUP160 isoform X4 [Cucumis sativus])

HSP 1 Score: 172.6 bits (436), Expect = 1.6e-39
Identity = 82/87 (94.25%), Postives = 85/87 (97.70%), Query Frame = 0 

Query: 132 GWNGRVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEAR 191
           G+  RVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEAR
Sbjct: 216 GFISRVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEAR 275

Query: 192 FVRLWVGQANTDKSTISLAILYNHPDE 219
           FVRLWVGQANTDKSTISLAILYNHP++
Sbjct: 276 FVRLWVGQANTDKSTISLAILYNHPED 302

[Close]
BLAST of CsGy2G009630 vs. NCBI nr
Match: XP_008457192.1 (PREDICTED: nuclear pore complex protein NUP160 isoform X1 [Cucumis melo])

HSP 1 Score: 166.4 bits (420), Expect = 1.2e-37
Identity = 79/87 (90.80%), Postives = 82/87 (94.25%), Query Frame = 0 

Query: 132 GWNGRVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEAR 191
           G+  RVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRV NHSMNIATMAEAR
Sbjct: 216 GFISRVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVLNHSMNIATMAEAR 275

Query: 192 FVRLWVGQANTDKSTISLAILYNHPDE 219
           F RLWVGQANTDKSTISLAILY HP++
Sbjct: 276 FARLWVGQANTDKSTISLAILYKHPED 302

[Close]
BLAST of CsGy2G009630 vs. TAIR10
Match: AT1G33410.1 (SUPPRESSOR OF AUXIN RESISTANCE1)

HSP 1 Score: 75.9 bits (185), Expect = 3.8e-14
Identity = 37/75 (49.33%), Postives = 49/75 (65.33%), Query Frame = 0 

Query: 139 LAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEARFVRLWVG 198
           +  AVQD+ ISEV GR +L VLH+DG LRVWD+  +SRV   S+    +     VRLW+G
Sbjct: 224 VVAAVQDLFISEVHGRNYLCVLHADGALRVWDILTYSRVLCQSIAAKNLEGVMCVRLWLG 283

Query: 199 QANTDKSTISLAILY 214
           +A+ D   I LA+LY
Sbjct: 284 KADYDSGIIPLAVLY 298

[Close]
BLAST of CsGy2G009630 vs. Swiss-Prot
Match: sp|Q9C811|NU160_ARATH (Nuclear pore complex protein NUP160 OS=Arabidopsis thaliana OX=3702 GN=NUP160 PE=1 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 6.8e-13
Identity = 37/75 (49.33%), Postives = 49/75 (65.33%), Query Frame = 0 

Query: 139 LAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEARFVRLWVG 198
           +  AVQD+ ISEV GR +L VLH+DG LRVWD+  +SRV   S+    +     VRLW+G
Sbjct: 224 VVAAVQDLFISEVHGRNYLCVLHADGALRVWDILTYSRVLCQSIAAKNLEGVMCVRLWLG 283

Query: 199 QANTDKSTISLAILY 214
           +A+ D   I LA+LY
Sbjct: 284 KADYDSGIIPLAVLY 298

[Close]
BLAST of CsGy2G009630 vs. TrEMBL
Match: tr|A0A0A0LLC2|A0A0A0LLC2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G150000 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.1e-39
Identity = 82/87 (94.25%), Postives = 85/87 (97.70%), Query Frame = 0 

Query: 132 GWNGRVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEAR 191
           G+  RVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEAR
Sbjct: 216 GFISRVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEAR 275

Query: 192 FVRLWVGQANTDKSTISLAILYNHPDE 219
           FVRLWVGQANTDKSTISLAILYNHP++
Sbjct: 276 FVRLWVGQANTDKSTISLAILYNHPED 302

[Close]
BLAST of CsGy2G009630 vs. TrEMBL
Match: tr|A0A1S3C516|A0A1S3C516_CUCME (nuclear pore complex protein NUP160 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103496931 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 7.8e-38
Identity = 79/87 (90.80%), Postives = 82/87 (94.25%), Query Frame = 0 

Query: 132 GWNGRVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEAR 191
           G+  RVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRV NHSMNIATMAEAR
Sbjct: 216 GFISRVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVLNHSMNIATMAEAR 275

Query: 192 FVRLWVGQANTDKSTISLAILYNHPDE 219
           F RLWVGQANTDKSTISLAILY HP++
Sbjct: 276 FARLWVGQANTDKSTISLAILYKHPED 302

[Close]
BLAST of CsGy2G009630 vs. TrEMBL
Match: tr|A0A1S3C5M5|A0A1S3C5M5_CUCME (nuclear pore complex protein NUP160 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496931 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 7.8e-38
Identity = 79/87 (90.80%), Postives = 82/87 (94.25%), Query Frame = 0 

Query: 132 GWNGRVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEAR 191
           G+  RVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRV NHSMNIATMAEAR
Sbjct: 216 GFISRVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVLNHSMNIATMAEAR 275

Query: 192 FVRLWVGQANTDKSTISLAILYNHPDE 219
           F RLWVGQANTDKSTISLAILY HP++
Sbjct: 276 FARLWVGQANTDKSTISLAILYKHPED 302

[Close]
BLAST of CsGy2G009630 vs. TrEMBL
Match: tr|A0A1S3C685|A0A1S3C685_CUCME (nuclear pore complex protein NUP160 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103496931 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 7.8e-38
Identity = 79/87 (90.80%), Postives = 82/87 (94.25%), Query Frame = 0 

Query: 132 GWNGRVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEAR 191
           G+  RVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRV NHSMNIATMAEAR
Sbjct: 216 GFISRVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVLNHSMNIATMAEAR 275

Query: 192 FVRLWVGQANTDKSTISLAILYNHPDE 219
           F RLWVGQANTDKSTISLAILY HP++
Sbjct: 276 FARLWVGQANTDKSTISLAILYKHPED 302

[Close]
BLAST of CsGy2G009630 vs. TrEMBL
Match: tr|A0A1S3C511|A0A1S3C511_CUCME (nuclear pore complex protein NUP160 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496931 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 7.8e-38
Identity = 79/87 (90.80%), Postives = 82/87 (94.25%), Query Frame = 0 

Query: 132 GWNGRVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVFNHSMNIATMAEAR 191
           G+  RVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRV NHSMNIATMAEAR
Sbjct: 216 GFISRVKLAGAVQDMVISEVCGRQFLFVLHSDGNLRVWDLSCHSRVLNHSMNIATMAEAR 275

Query: 192 FVRLWVGQANTDKSTISLAILYNHPDE 219
           F RLWVGQANTDKSTISLAILY HP++
Sbjct: 276 FARLWVGQANTDKSTISLAILYKHPED 302

The following BLAST results are available for this feature:
BLAST of CsGy2G009630 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61507.11.6e-3994.25hypothetical protein Csa_2G150000 [Cucumis sativus][more]
XP_011649106.11.6e-3994.25PREDICTED: nuclear pore complex protein NUP160 isoform X1 [Cucumis sativus][more]
XP_011649108.11.6e-3994.25PREDICTED: nuclear pore complex protein NUP160 isoform X3 [Cucumis sativus][more]
XP_011649109.11.6e-3994.25PREDICTED: nuclear pore complex protein NUP160 isoform X4 [Cucumis sativus][more]
XP_008457192.11.2e-3790.80PREDICTED: nuclear pore complex protein NUP160 isoform X1 [Cucumis melo][more]
BLAST of CsGy2G009630 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G33410.13.8e-1449.33SUPPRESSOR OF AUXIN RESISTANCE1[more]
BLAST of CsGy2G009630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9C811|NU160_ARATH6.8e-1349.33Nuclear pore complex protein NUP160 OS=Arabidopsis thaliana OX=3702 GN=NUP160 PE... [more]
BLAST of CsGy2G009630 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LLC2|A0A0A0LLC2_CUCSA1.1e-3994.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G150000 PE=4 SV=1[more]
tr|A0A1S3C516|A0A1S3C516_CUCME7.8e-3890.80nuclear pore complex protein NUP160 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103... [more]
tr|A0A1S3C5M5|A0A1S3C5M5_CUCME7.8e-3890.80nuclear pore complex protein NUP160 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103... [more]
tr|A0A1S3C685|A0A1S3C685_CUCME7.8e-3890.80nuclear pore complex protein NUP160 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103... [more]
tr|A0A1S3C511|A0A1S3C511_CUCME7.8e-3890.80nuclear pore complex protein NUP160 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G009630.1CsGy2G009630.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF11715Nup160coord: 141..219
e-value: 4.3E-7
score: 28.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy2G009630Csa2G150000Cucumber (Chinese Long) v2cgybcuB056
CsGy2G009630MELO3C020405Melon (DHL92) v3.5.1cgybmeB115
CsGy2G009630CSPI02G09440Wild cucumber (PI 183967)cgybcpiB056
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G009630Cucumber (Chinese Long) v3cgybcucB064
CsGy2G009630Cucurbita moschata (Rifu)cgybcmoB186
CsGy2G009630Cucurbita pepo (Zucchini)cgybcpeB175
CsGy2G009630Melon (DHL92) v3.6.1cgybmedB114