CsGy2G008610 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G008610
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionDNA mismatch repair protein MSH4
LocationChr2 : 7703020 .. 7706733 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGCTTCCAAATTTGGCTTTTAACACTTCAACTCGTGCAGCCCGTCTTGGTGACAACACTACAATAGTAGTGTTTGGCTTTATGGGCAATAGCTCAATGTTATTCTTCTTTGGTGATGGGCATTTGAAGTTTGCCAATTCACGATCACTGTTGGATTCCTTTCTTTGGTAAATGTTATATGGTTTCATAGCCGTTGTAACTTTGGTTGAAAGAACTTTGGGTTTTAACACATGATAATCTACATATCTCCGTTTTGTTTGCATCATCTTCATCTTTTTGAATGCTTGCTGAGAGAAAACGTGACAAAGAGATGTCAAGCAAAATATATATATATTCCATAATTACTATTGGATGCATTGTTATTATATATTAGAAACAAAATTACAAGATAATTAAACTTAGAAAAGAAAAAAAAAATCCACACGTGAAACTGTGGTGAAATTAGAGACAATGTTGAAATTATGATGTAATATGAGACTTCGTTTTATTCATATATATTTGCAATATACTTTAGTTTTAATTTTTACAGATTTTTTGTTTTGATATTTAGTAATTGAACTTGGATATGTATATTAGTTTTTATACATTTCAACCAGAAATTTAGAGGGAAAAATTGGAAATATGTCCGCTTAAATTTGGGTGCAAATTTTCAAATTTTGGTATAAGCAACGTTTTAAATTTTCACGTTTGAAAGCACAACAATTAAAGATCTTAATTTCACAAAAATTATGATGGAAATATACTTAAAATATCTTCAAGAAATGCAACAAACAGCTTAAGGGAGTTTTTATGTATATGGAAACACAATGCAACCCACTTAAACTTAAAGAAAAAGAAATCATCATTAGATTAATCTAGTGGTATAAATGTCATAACTAACTAAGAGGTCATGGGTTGAATCTAAGGTTGGCTTAGTGGTAAAAATGTCATAACTAACTAAGAGGTCATGGGTTGAATCTACGGTGCCTACCCACCTAAGAATTAATTTTCCATGGGTTTCCTTGAGTACACTAACATATATAAAAAAGCCTTAAAGAAAATGAAAGAAAAGCTCACCGAAATTAATATGGAGAAATGTTCGAGAGAAGGTGCGAATTATGAAGAAAAGAATCCGCCTCTTGACACTCTTTAGCTAAGAGAGAAAAATCAAGAATCCACCTCGTAGAGAGAAAAATCAAGAATCCACCTCGTAGGGAGAAAAATCAAGAATCCAACACGTTGAGAGAAATATGAAGGACTGAGTCTTATTTGTGTAGATATATATTTTCTTTTTGAACCAATATTAAGTTTCCCGCCAAATCCTAAATTGTAATTATTGTCTTTTTATGCTAAAAATTTCGAATATAAACAAACAAACAAACTTTACGACTAAAGATTGGATTTAGTAATTTTTCAACATATATATTTATTTTCGGAGGTTGGGATCGTTTCCCGCCAAACTCATGAGCCCATAATATTTACTACATTTTCTTATTTTGCCTAAAACTAGAAAATACAGGCCGCGCATGATGAATTTATATGTACCGATGCTTTTTGTGCATTTCCTGTAGCTTTAATGCCTTTGTACGAACTTCGAACTTATTGAGTAATGAATAAGTAATTTGGAGGTTGTTTTGCGGTTGAGTAAATCATTCTTAAGCTTAAATTGGAACGGTTTATACTCTCTAAATTTTAATTAAAGGACATGAATCTGAGAGATAGAGGTTAGTTCATTTTACCGTATAACTGCTTGCCGAAGATTTTGCTTCGGCTACTAACATAGGTGAATTGCTTACTTGAGATCAATCCTCGTCCAGGTTGGAGTTGCTGCGTTTGACTTGAGATCAGCTTCACTTCATCTTTCTCAATATATCGAGACCAGCAGCTCCTACCAGAATACAAAAACTTTGCTGCATTTTTATGAGCCAATGGTCATACTTGTTTCTCCTAACAAGCTCGCACCTGATGGCATGGTTGGAGTTTCTGTTTTGGGTGATAGATTTTTTGCTACCGTGAAGAAGGTCAACTTAAATTGCTTGCCCGTGGAGATTGGTTGCCTTAATTATAGAAAAACAAGAAGACAAGTCTGTATAACATGCTCAAAACAACAAAAACTATAGGAGGGTATGAAATTAAATGTTGGTTGGTTTTCTCTTTTCCACTTGTTGCTGCAAATTTTGATAGTTTACATCTTCAAGTTGTCATCTAAAGTAGCATTTGATGACATGTAATTGAATATCACATAAAATGAGTCATTCATTCCTTATAGAACATTATTTTGATATACAGTTATTGTTAAGTACTCATGTGAATATGTATGTTTTTAGTCCCTTCCTCGTGTTTATTTTAAAATTTTGTGCTTTACTGTCACTGCAGTTTCGGTCAAGATTTTGTTACAGGTCTAGACTTCTTCCTGCCAATCTTTTACAGCCATTAAAAGATATCGAAACCATTAATGCCCGTCTGGATTGCTTGGTCAGTATCATACGAGCTTTATGGTTTTCATATCTACATTTGTGGTGTACTGGCATCGCATGGTTCGATTGCTGTGATATTAGTAACATAATTGCTTTAGAACTTGCTACTGAAGAGGTTGGATTTCATATTTCTTTTAGTAAGGGTTACAAGTCTTATGTATCTGCCCTACCCACTATTTCCTTTGAAAGTGTCAAGTAACAATAATGTCGACTTAGTACTTATAAAACATTCTTAGCCTCGCCATAGTTCATAGGTACCAATTGTGATTTGGACCATGGTCTTCCTGAGAGTAGTTTTTCCAAATCAGTAAATCACTACGAAAGAAGTAAATTTAAACGGGCTAGAATAACAATATTATTATTGTGTGTTAGCCAACATTGCCATGAGTTGCCACTTACAAAGAGTATGGTGGAGCGAGATGAACTATGCTGGGGCTGCTATAGATGGAACATGTGTGAAAAATCTTTTATTTCTCCGATTGAGCTCCTCTCAATTGTTACATGAAGGATCTTCCTATATTGAACTCACTATGACCCCTATTGCAGCATCTTCTTTCATTGAACTCAGTATGGCCAAGTAATGCATCAGCCATGCATTTTAATCAATTCTGTTAAATCAAATATTTCATACCGTCCGTTGAAATTATGTACTTTTTTGTTCATAAATTTCCTGGATTAATTTTCGACTTCACCCTCCGGTTGGCTAGAAAATTAAGTTCTGTTGGATTGTGTCTAAAGCCCTACATTGCCTAGATAAAGGGAAGATCTTTGAGATATAAGTGAGGTGAGGGCCAACCATCTCTATTGATATGAGGTGTTTGGGGTGAAATCAAAAGTAAAGTAATTCTTCCCAACAACTTTCTTATATAATGAGATAATGATTAAATAATTCAATTTGTTCTTGTATAGTTTCTATAGGTGCCAGATACTTCATCGATAAGGTGCTGCTTCCTAACCTTTTCTTTTTCTTTTCTAGGATGAATTGATGAGCAATGAACAATTATTCTTTGGGCTTTCTCAAGCTCTCCGTAAATTTCCTAAAGAGACGGGTAAGTTTGCAGCTACAACAATAGTCGTGTGCCCAATAAAACGCACACAATCTTGTGATCTCGTAGGAGAAAGTGAACTTGAAAAACACCATGATACTGGGTTATAAGTGATCTCGTCGGACCACTCTTAAACATGGCATGACAGACTAGTGGTTCCGTTATTGAGAAAACCTATCATAATGCCAACAAAGTCCACAAAGAATTAG

mRNA sequence

ATGGTGCTTCCAAATTTGGCTTTTAACACTTCAACTCGTGCAGCCCGTCTTGGTGACAACACTACAATAGTAGTGTTTGGCTTTATGGGCAATAGCTCAATGTTATTCTTCTTTGGTGATGGGCATTTGAAGTTTGCCAATTCACGATCACTGTTGGATTCCTTTCTTTGCTTTAATGCCTTTGTACGAACTTCGAACTTATTGATTTACATCTTCAAGTTGTCATCTAAAGTAGCATTTGATGACATGTCTAGACTTCTTCCTGCCAATCTTTTACAGCCATTAAAAGATATCGAAACCATTAATGCCCGTCTGGATTGCTTGGTCAGTATCATACGAGCTTTATGGTTTTCATATCTACATTTGTGGTGTACTGGCATCGCATGGTTCGATTGCTGTGATATTAGTAACATAATTGCTTTAGAACTTGCTACTGAAGAGTATGGCCAAGATGAATTGATGAGCAATGAACAATTATTCTTTGGGCTTTCTCAAGCTCTCCGTAAATTTCCTAAAGAGACGGGTAAGTTTGCAGCTACAACAATAGTCGTGTGCCCAATAAAACGCACACAATCTTGTGATCTCGTAGGAGAAAGTGAACTTGAAAAACACCATGATACTGGGTTATAAGTGATCTCGTCGGACCACTCTTAAACATGGCATGACAGACTAGTGGTTCCGTTATTGAGAAAACCTATCATAATGCCAACAAAGTCCACAAAGAATTAG

Coding sequence (CDS)

ATGGTGCTTCCAAATTTGGCTTTTAACACTTCAACTCGTGCAGCCCGTCTTGGTGACAACACTACAATAGTAGTGTTTGGCTTTATGGGCAATAGCTCAATGTTATTCTTCTTTGGTGATGGGCATTTGAAGTTTGCCAATTCACGATCACTGTTGGATTCCTTTCTTTGCTTTAATGCCTTTGTACGAACTTCGAACTTATTGATTTACATCTTCAAGTTGTCATCTAAAGTAGCATTTGATGACATGTCTAGACTTCTTCCTGCCAATCTTTTACAGCCATTAAAAGATATCGAAACCATTAATGCCCGTCTGGATTGCTTGGTCAGTATCATACGAGCTTTATGGTTTTCATATCTACATTTGTGGTGTACTGGCATCGCATGGTTCGATTGCTGTGATATTAGTAACATAATTGCTTTAGAACTTGCTACTGAAGAGTATGGCCAAGATGAATTGATGAGCAATGAACAATTATTCTTTGGGCTTTCTCAAGCTCTCCGTAAATTTCCTAAAGAGACGGGTAAGTTTGCAGCTACAACAATAGTCGTGTGCCCAATAAAACGCACACAATCTTGTGATCTCGTAGGAGAAAGTGAACTTGAAAAACACCATGATACTGGGTTATAA

Protein sequence

MVLPNLAFNTSTRAARLGDNTTIVVFGFMGNSSMLFFFGDGHLKFANSRSLLDSFLCFNAFVRTSNLLIYIFKLSSKVAFDDMSRLLPANLLQPLKDIETINARLDCLVSIIRALWFSYLHLWCTGIAWFDCCDISNIIALELATEEYGQDELMSNEQLFFGLSQALRKFPKETGKFAATTIVVCPIKRTQSCDLVGESELEKHHDTGL
Homology
[Close]
BLAST of CsGy2G008610 vs. NCBI nr
Match: XP_011656157.1 (PREDICTED: DNA mismatch repair protein MSH4 [Cucumis sativus])

HSP 1 Score: 102.8 bits (255), Expect = 1.4e-18
Identity = 64/104 (61.54%), Postives = 66/104 (63.46%), Query Frame = 0 

Query: 84  SRLLPANLLQPLKDIETINARLDCLVSIIRALWFSYLHLWCTGIAWFDCCDISNIIALEL 143
           SRLL ANLLQPLKDIETINARLDCLVSI+RAL                     N IALEL
Sbjct: 172 SRLLRANLLQPLKDIETINARLDCLVSIVRAL--------------------CNRIALEL 231

Query: 144 ATEEYG-----------QDELMSNEQLFFGLSQALRKFPKETGK 177
           A EE G            DELMSNEQLFFGLSQALRKFPKET +
Sbjct: 232 AIEEVGYHNSFSKGYKSYDELMSNEQLFFGLSQALRKFPKETDR 255

[Close]
BLAST of CsGy2G008610 vs. NCBI nr
Match: KGN61381.1 (hypothetical protein Csa_2G103600 [Cucumis sativus])

HSP 1 Score: 91.3 bits (225), Expect = 4.3e-15
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 1  MVLPNLAFNTSTRAARLGDNTTIVVFGFMGNSSMLFFFGDGHLK 45
          MVLPNLAFNTSTRAARLGDNTTIVVFGFMGNSSMLFFFGDGHLK
Sbjct: 1  MVLPNLAFNTSTRAARLGDNTTIVVFGFMGNSSMLFFFGDGHLK 44

[Close]
BLAST of CsGy2G008610 vs. NCBI nr
Match: KGN50270.1 (hypothetical protein Csa_5G164660 [Cucumis sativus])

HSP 1 Score: 80.5 bits (197), Expect = 7.5e-12
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0 

Query: 84  SRLLPANLLQPLKDIETINARLDCLVSIIRALWFSYLHLW 124
           SRLL ANLLQPLKDIETINARLDCLVSI+RALWFSYLHLW
Sbjct: 155 SRLLRANLLQPLKDIETINARLDCLVSIVRALWFSYLHLW 194

[Close]
BLAST of CsGy2G008610 vs. NCBI nr
Match: PPS11843.1 (hypothetical protein GOBAR_AA08801 [Gossypium barbadense])

HSP 1 Score: 80.5 bits (197), Expect = 7.5e-12
Identity = 51/93 (54.84%), Postives = 57/93 (61.29%), Query Frame = 0 

Query: 84  SRLLPANLLQPLKDIETINARLDCLVSIIRALWFSYLHLWCTGIAWFDCCDISNIIALEL 143
           +RLL ANLLQPLKDIETIN RLDCL    R L    +    T  + F     +N+     
Sbjct: 254 TRLLRANLLQPLKDIETINTRLDCLDK--RLLLSHLMSFSLTPKSKFIKAHCNNL----- 313

Query: 144 ATEEYGQDELMSNEQLFFGLSQALRKFPKETGK 177
                 QDELMSNEQLFFGLSQ LRKFPKET +
Sbjct: 314 ------QDELMSNEQLFFGLSQVLRKFPKETDR 333

[Close]
BLAST of CsGy2G008610 vs. NCBI nr
Match: XP_018447150.1 (PREDICTED: DNA mismatch repair protein MSH4 isoform X1 [Raphanus sativus] >XP_018447155.1 PREDICTED: DNA mismatch repair protein MSH4 isoform X1 [Raphanus sativus])

HSP 1 Score: 76.6 bits (187), Expect = 1.1e-10
Identity = 53/126 (42.06%), Postives = 62/126 (49.21%), Query Frame = 0 

Query: 51  LLDSFLCFNAFVRTSNLLIYIFKLSSKVAFDDMSRLLPANLLQPLKDIETINARLDCLVS 110
           ++D F   NA + T+N    +F++         +RLL ANLLQPLKDIETIN RLDCL  
Sbjct: 177 IIDPF--HNALLGTNNKKRSLFQMLKTTKTVGGTRLLRANLLQPLKDIETINTRLDCL-- 236

Query: 111 IIRALWFSYLHLWCTGIAWFDCCDISNIIALELATEEYGQDELMSNEQLFFGLSQALRKF 170
                                                   DELMSNEQLF+GLSQ LRKF
Sbjct: 237 ----------------------------------------DELMSNEQLFYGLSQVLRKF 258

Query: 171 PKETGK 177
           PKETGK
Sbjct: 297 PKETGK 258

[Close]
BLAST of CsGy2G008610 vs. TAIR10
Match: AT4G17380.1 (MUTS-like protein 4)

HSP 1 Score: 76.3 bits (186), Expect = 2.6e-14
Identity = 54/126 (42.86%), Postives = 61/126 (48.41%), Query Frame = 0 

Query: 51  LLDSFLCFNAFVRTSNLLIYIFKLSSKVAFDDMSRLLPANLLQPLKDIETINARLDCLVS 110
           L+D F   NA + TSN    +F++         +RLL ANLLQPLKDIETIN RLDCL  
Sbjct: 177 LIDPF--HNALLGTSNKKRSLFQMFKTTKTAGGTRLLRANLLQPLKDIETINTRLDCL-- 236

Query: 111 IIRALWFSYLHLWCTGIAWFDCCDISNIIALELATEEYGQDELMSNEQLFFGLSQALRKF 170
                                                   DELMSNEQLFFGLSQ LRKF
Sbjct: 237 ----------------------------------------DELMSNEQLFFGLSQVLRKF 258

Query: 171 PKETGK 177
           PKET +
Sbjct: 297 PKETDR 258

[Close]
BLAST of CsGy2G008610 vs. Swiss-Prot
Match: sp|F4JP48|MSH4_ARATH (DNA mismatch repair protein MSH4 OS=Arabidopsis thaliana OX=3702 GN=MSH4 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.6e-13
Identity = 54/126 (42.86%), Postives = 61/126 (48.41%), Query Frame = 0 

Query: 51  LLDSFLCFNAFVRTSNLLIYIFKLSSKVAFDDMSRLLPANLLQPLKDIETINARLDCLVS 110
           L+D F   NA + TSN    +F++         +RLL ANLLQPLKDIETIN RLDCL  
Sbjct: 177 LIDPF--HNALLGTSNKKRSLFQMFKTTKTAGGTRLLRANLLQPLKDIETINTRLDCL-- 236

Query: 111 IIRALWFSYLHLWCTGIAWFDCCDISNIIALELATEEYGQDELMSNEQLFFGLSQALRKF 170
                                                   DELMSNEQLFFGLSQ LRKF
Sbjct: 237 ----------------------------------------DELMSNEQLFFGLSQVLRKF 258

Query: 171 PKETGK 177
           PKET +
Sbjct: 297 PKETDR 258

[Close]
BLAST of CsGy2G008610 vs. TrEMBL
Match: tr|A0A0A0LN34|A0A0A0LN34_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G103600 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.8e-15
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 1  MVLPNLAFNTSTRAARLGDNTTIVVFGFMGNSSMLFFFGDGHLK 45
          MVLPNLAFNTSTRAARLGDNTTIVVFGFMGNSSMLFFFGDGHLK
Sbjct: 1  MVLPNLAFNTSTRAARLGDNTTIVVFGFMGNSSMLFFFGDGHLK 44

[Close]
BLAST of CsGy2G008610 vs. TrEMBL
Match: tr|A0A0A0KKQ1|A0A0A0KKQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G164660 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 5.0e-12
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0 

Query: 84  SRLLPANLLQPLKDIETINARLDCLVSIIRALWFSYLHLW 124
           SRLL ANLLQPLKDIETINARLDCLVSI+RALWFSYLHLW
Sbjct: 155 SRLLRANLLQPLKDIETINARLDCLVSIVRALWFSYLHLW 194

[Close]
BLAST of CsGy2G008610 vs. TrEMBL
Match: tr|A0A2P5Y8C6|A0A2P5Y8C6_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA08801 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 5.0e-12
Identity = 51/93 (54.84%), Postives = 57/93 (61.29%), Query Frame = 0 

Query: 84  SRLLPANLLQPLKDIETINARLDCLVSIIRALWFSYLHLWCTGIAWFDCCDISNIIALEL 143
           +RLL ANLLQPLKDIETIN RLDCL    R L    +    T  + F     +N+     
Sbjct: 254 TRLLRANLLQPLKDIETINTRLDCLDK--RLLLSHLMSFSLTPKSKFIKAHCNNL----- 313

Query: 144 ATEEYGQDELMSNEQLFFGLSQALRKFPKETGK 177
                 QDELMSNEQLFFGLSQ LRKFPKET +
Sbjct: 314 ------QDELMSNEQLFFGLSQVLRKFPKETDR 333

[Close]
BLAST of CsGy2G008610 vs. TrEMBL
Match: tr|A0A1P8B358|A0A1P8B358_ARATH (MUTS-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=MSH4 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 9.4e-11
Identity = 54/126 (42.86%), Postives = 61/126 (48.41%), Query Frame = 0 

Query: 51  LLDSFLCFNAFVRTSNLLIYIFKLSSKVAFDDMSRLLPANLLQPLKDIETINARLDCLVS 110
           L+D F   NA + TSN    +F++         +RLL ANLLQPLKDIETIN RLDCL  
Sbjct: 177 LIDPF--HNALLGTSNKKRSLFQMFKTTKTAGGTRLLRANLLQPLKDIETINTRLDCL-- 236

Query: 111 IIRALWFSYLHLWCTGIAWFDCCDISNIIALELATEEYGQDELMSNEQLFFGLSQALRKF 170
                                                   DELMSNEQLFFGLSQ LRKF
Sbjct: 237 ----------------------------------------DELMSNEQLFFGLSQVLRKF 258

Query: 171 PKETGK 177
           PKET +
Sbjct: 297 PKETDR 258

[Close]
BLAST of CsGy2G008610 vs. TrEMBL
Match: tr|A0A178V0H3|A0A178V0H3_ARATH (MSH4 OS=Arabidopsis thaliana OX=3702 GN=AXX17_At4g20430 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 9.4e-11
Identity = 54/126 (42.86%), Postives = 61/126 (48.41%), Query Frame = 0 

Query: 51  LLDSFLCFNAFVRTSNLLIYIFKLSSKVAFDDMSRLLPANLLQPLKDIETINARLDCLVS 110
           L+D F   NA + TSN    +F++         +RLL ANLLQPLKDIETIN RLDCL  
Sbjct: 177 LIDPF--HNALLGTSNKKRSLFQMFKTTKTAGGTRLLRANLLQPLKDIETINTRLDCL-- 236

Query: 111 IIRALWFSYLHLWCTGIAWFDCCDISNIIALELATEEYGQDELMSNEQLFFGLSQALRKF 170
                                                   DELMSNEQLFFGLSQ LRKF
Sbjct: 237 ----------------------------------------DELMSNEQLFFGLSQVLRKF 258

Query: 171 PKETGK 177
           PKET +
Sbjct: 297 PKETDR 258

The following BLAST results are available for this feature:
BLAST of CsGy2G008610 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011656157.11.4e-1861.54PREDICTED: DNA mismatch repair protein MSH4 [Cucumis sativus][more]
KGN61381.14.3e-15100.00hypothetical protein Csa_2G103600 [Cucumis sativus][more]
KGN50270.17.5e-1295.00hypothetical protein Csa_5G164660 [Cucumis sativus][more]
PPS11843.17.5e-1254.84hypothetical protein GOBAR_AA08801 [Gossypium barbadense][more]
XP_018447150.11.1e-1042.06PREDICTED: DNA mismatch repair protein MSH4 isoform X1 [Raphanus sativus] >XP_01... [more]
BLAST of CsGy2G008610 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G17380.12.6e-1442.86MUTS-like protein 4[more]
BLAST of CsGy2G008610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|F4JP48|MSH4_ARATH4.6e-1342.86DNA mismatch repair protein MSH4 OS=Arabidopsis thaliana OX=3702 GN=MSH4 PE=2 SV... [more]
BLAST of CsGy2G008610 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LN34|A0A0A0LN34_CUCSA2.8e-15100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G103600 PE=4 SV=1[more]
tr|A0A0A0KKQ1|A0A0A0KKQ1_CUCSA5.0e-1295.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G164660 PE=4 SV=1[more]
tr|A0A2P5Y8C6|A0A2P5Y8C6_GOSBA5.0e-1254.84Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA08801 PE=4 SV... [more]
tr|A0A1P8B358|A0A1P8B358_ARATH9.4e-1142.86MUTS-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=MSH4 PE=4 SV=1[more]
tr|A0A178V0H3|A0A178V0H3_ARATH9.4e-1142.86MSH4 OS=Arabidopsis thaliana OX=3702 GN=AXX17_At4g20430 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006298 mismatch repair
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0030983 mismatched DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G008610.1CsGy2G008610.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy2G008610Csa2G103600Cucumber (Chinese Long) v2cgybcuB056
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G008610Cucurbita maxima (Rimu)cgybcmaB205
CsGy2G008610Cucurbita maxima (Rimu)cgybcmaB259
CsGy2G008610Cucurbita moschata (Rifu)cgybcmoB199
CsGy2G008610Cucurbita moschata (Rifu)cgybcmoB240
CsGy2G008610Cucurbita pepo (Zucchini)cgybcpeB171
CsGy2G008610Cucurbita pepo (Zucchini)cgybcpeB222
CsGy2G008610Bottle gourd (USVL1VR-Ls)cgyblsiB089
CsGy2G008610Melon (DHL92) v3.5.1cgybmeB124
CsGy2G008610Melon (DHL92) v3.6.1cgybmedB122
CsGy2G008610Watermelon (Charleston Gray)cgybwcgB097
CsGy2G008610Watermelon (97103) v1cgybwmB150
CsGy2G008610Wild cucumber (PI 183967)cgybcpiB056
CsGy2G008610Silver-seed gourdcarcgybB0696
CsGy2G008610Cucumber (Chinese Long) v3cgybcucB064
CsGy2G008610Watermelon (97103) v2cgybwmbB100
CsGy2G008610Wax gourdcgybwgoB134