CsGy2G008270 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G008270
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	ALBINO3-like protein 2, chloroplastic
Location	Chr2 : 7251459 .. 7252145 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATTTCTTATCCAGTTATTTCTTTCCGGTCATCCTACGGAAGTTGAGGGTGTAGATCTTCTAATTCTTGCATCCCAATGGGCAGGTGTTGCCTTTATAAGGCAGGTGAGGTTAAATCCATGGTTTCTTCTAGTGCTGGCCCTAGCAATTTGTCATTGCATCATTCTTTTTCCGGATTAATTTGGGATGATATCCATGTTAACTGCTTTTTGGAGCTCACGTTCTGACTATCAGTTAATGTTCTACTAAGTACTACGTTTCTTTCATTATTTTTATGTCAGGGGAAAATGGTAGAAGGCATTGCTCACCTAGAAAGAGTTGCTAATTTGAAAGAGCCAGAAGAACCAAAAAGCAAAGCCCATTATTATGATGGATTGGTTCTGCTAGCAAGGTCTCAACCATACCAATGATTAGATTGATTTTTCATCAACCCACCCTTCTTCCCAAGGGGAAAATGATTTTCGAAAAGCTTTCGCATTCCCTTCCTTCAGCAAGCAAATTTACTATCATCTTATTTCTTGTCATTTCAGTGCTCTATACAATGAAGGTCGCAAGGCTGAAGCTACCAAATACTTAAAGTCAGCTGTAGCTTATAATCCTGCCTACAAAGAATACTTGGATCAATGCGAGGACGACAATGATAAATTAGTTGGCGATCTTGTCAGCAGTAGGAGAGGAGATTATTGA

mRNA sequence

TTATTTCTTATCCAGTTATTTCTTTCCGGTCATCCTACGGAAGTTGAGGGTGTAGATCTTCTAATTCTTGCATCCCAATGGGCAGGTGTTGCCTTTATAAGGCAGGGGAAAATGGTAGAAGGCATTGCTCACCTAGAAAGAGTTGCTAATTTGAAAGAGCCAGAAGAACCAAAAAGCAAAGCCCATTATTATGATGGATTGGTTCTGCTAGCAAGTGCTCTATACAATGAAGGTCGCAAGGCTGAAGCTACCAAATACTTAAAGTCAGCTGTAGCTTATAATCCTGCCTACAAAGAATACTTGGATCAATGCGAGGACGACAATGATAAATTAGTTGGCGATCTTGTCAGCAGTAGGAGAGGAGATTATTGA

Coding sequence (CDS)

TTATTTCTTATCCAGTTATTTCTTTCCGGTCATCCTACGGAAGTTGAGGGTGTAGATCTTCTAATTCTTGCATCCCAATGGGCAGGTGTTGCCTTTATAAGGCAGGGGAAAATGGTAGAAGGCATTGCTCACCTAGAAAGAGTTGCTAATTTGAAAGAGCCAGAAGAACCAAAAAGCAAAGCCCATTATTATGATGGATTGGTTCTGCTAGCAAGTGCTCTATACAATGAAGGTCGCAAGGCTGAAGCTACCAAATACTTAAAGTCAGCTGTAGCTTATAATCCTGCCTACAAAGAATACTTGGATCAATGCGAGGACGACAATGATAAATTAGTTGGCGATCTTGTCAGCAGTAGGAGAGGAGATTATTGA

Protein sequence

LFLIQLFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYYDGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY

Homology

[Close]

BLAST of CsGy2G008270 vs. NCBI nr
Match: XP_004138896.1 (PREDICTED: ALBINO3-like protein 2, chloroplastic [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 3.3e-60
Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 5   QLFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYY 64
           +LFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYY
Sbjct: 455 KLFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYY 514

Query: 65  DGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 124
           DGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY
Sbjct: 515 DGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 573

[Close]

BLAST of CsGy2G008270 vs. NCBI nr
Match: KGN61345.1 (hypothetical protein Csa_2G094360 [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 3.3e-60
Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 5   QLFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYY 64
           +LFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYY
Sbjct: 127 KLFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYY 186

Query: 65  DGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 124
           DGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY
Sbjct: 187 DGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 245

[Close]

BLAST of CsGy2G008270 vs. NCBI nr
Match: XP_008441758.1 (PREDICTED: ALBINO3-like protein 2, chloroplastic [Cucumis melo])

HSP 1 Score: 233.8 bits (595), Expect = 3.1e-58
Identity = 115/119 (96.64%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 5   QLFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYY 64
           +LFLSGHPTEVEGVDLLILASQWAGVA IRQGKMVEGIAHLERVAN+KEPEEPKSKAHYY
Sbjct: 456 KLFLSGHPTEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERVANMKEPEEPKSKAHYY 515

Query: 65  DGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 124
           DGLVLLASALYNEGRKAEATKYLKSAVAYNPAYK YLDQCEDDNDKLVGDLVSSRRGDY
Sbjct: 516 DGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKVYLDQCEDDNDKLVGDLVSSRRGDY 574

[Close]

BLAST of CsGy2G008270 vs. NCBI nr
Match: XP_022933144.1 (ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 230.7 bits (587), Expect = 2.6e-57
Identity = 112/119 (94.12%), Postives = 116/119 (97.48%), Query Frame = 0


Query: 5   QLFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYY 64
           +LFLSGHPTEVEG DLLILASQWAGVA IRQGKMVEGIAHLER+AN+KEPEEPKSKAHYY
Sbjct: 456 KLFLSGHPTEVEGEDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEPKSKAHYY 515

Query: 65  DGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 124
           DGLVLLASALYNEGRKAEATKYL+SA AYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY
Sbjct: 516 DGLVLLASALYNEGRKAEATKYLQSAAAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 574

[Close]

BLAST of CsGy2G008270 vs. NCBI nr
Match: XP_022973910.1 (ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 229.2 bits (583), Expect = 7.7e-57
Identity = 111/119 (93.28%), Postives = 115/119 (96.64%), Query Frame = 0


Query: 5   QLFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYY 64
           +LFLSGHPTE EG DLLILASQWAGVA IRQGKMVEGIAHLER+AN+KEPEEPKSKAHYY
Sbjct: 456 KLFLSGHPTEAEGEDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEPKSKAHYY 515

Query: 65  DGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 124
           DGLVLLASALYNEGRKAEATKYL+SA AYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY
Sbjct: 516 DGLVLLASALYNEGRKAEATKYLQSAAAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 574

[Close]

BLAST of CsGy2G008270 vs. TAIR10
Match: AT3G44370.1 (Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain)

HSP 1 Score: 144.1 bits (362), Expect = 5.9e-35
Identity = 68/101 (67.33%), Postives = 83/101 (82.18%), Query Frame = 0


Query: 8   LSGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYYDGL 67
           L   PTEVE VDLLI+ASQWAGV+ IRQGK  EGI HLERVAN+KEP++PKSKAHY D L
Sbjct: 451 LDTSPTEVEEVDLLIVASQWAGVSNIRQGKTSEGITHLERVANMKEPDDPKSKAHYLDAL 510

Query: 68  VLLASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDN 109
           VL +SA++NEGR+ EA KYL+  VAY+P++ E L QCE+D+
Sbjct: 511 VLYSSAIFNEGRREEAAKYLRRVVAYDPSFSELLKQCEEDD 551

[Close]

BLAST of CsGy2G008270 vs. TAIR10
Match: AT1G65080.1 (Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain)

HSP 1 Score: 138.7 bits (348), Expect = 2.5e-33
Identity = 67/120 (55.83%), Postives = 89/120 (74.17%), Query Frame = 0


Query: 4   IQLFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHY 63
           I   L   P++ E V+LL+LASQWAG A+++QGK+  GI HLERVA L+EP +PKSK HY
Sbjct: 407 ISKLLDEDPSDAEDVELLMLASQWAGAAYVQQGKLKSGIIHLERVAKLREPGDPKSKEHY 466

Query: 64  YDGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 123
           ++ L+LL+SALY EG+  EA K L+  V +NPAYK  L+QCED+N+ LV DLVS R+  +
Sbjct: 467 FEALLLLSSALYKEGQSDEAAKILRVVVDHNPAYKPLLEQCEDENE-LVSDLVSRRKDHF 525

[Close]

BLAST of CsGy2G008270 vs. Swiss-Prot
Match: sp|Q0WUC5|ALB33_ARATH (ALBINO3-like protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALB3L3 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.1e-33
Identity = 68/101 (67.33%), Postives = 83/101 (82.18%), Query Frame = 0


Query: 8   LSGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYYDGL 67
           L   PTEVE VDLLI+ASQWAGV+ IRQGK  EGI HLERVAN+KEP++PKSKAHY D L
Sbjct: 451 LDTSPTEVEEVDLLIVASQWAGVSNIRQGKTSEGITHLERVANMKEPDDPKSKAHYLDAL 510

Query: 68  VLLASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDN 109
           VL +SA++NEGR+ EA KYL+  VAY+P++ E L QCE+D+
Sbjct: 511 VLYSSAIFNEGRREEAAKYLRRVVAYDPSFSELLKQCEEDD 551

[Close]

BLAST of CsGy2G008270 vs. Swiss-Prot
Match: sp|Q8L718|ALB32_ARATH (ALBINO3-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALB3L2 PE=2 SV=2)

HSP 1 Score: 138.7 bits (348), Expect = 4.5e-32
Identity = 67/120 (55.83%), Postives = 89/120 (74.17%), Query Frame = 0


Query: 4   IQLFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHY 63
           I   L   P++ E V+LL+LASQWAG A+++QGK+  GI HLERVA L+EP +PKSK HY
Sbjct: 407 ISKLLDEDPSDAEDVELLMLASQWAGAAYVQQGKLKSGIIHLERVAKLREPGDPKSKEHY 466

Query: 64  YDGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 123
           ++ L+LL+SALY EG+  EA K L+  V +NPAYK  L+QCED+N+ LV DLVS R+  +
Sbjct: 467 FEALLLLSSALYKEGQSDEAAKILRVVVDHNPAYKPLLEQCEDENE-LVSDLVSRRKDHF 525

[Close]

BLAST of CsGy2G008270 vs. TrEMBL
Match: tr|A0A0A0LHD0|A0A0A0LHD0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G094360 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.2e-60
Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 5   QLFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYY 64
           +LFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYY
Sbjct: 127 KLFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYY 186

Query: 65  DGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 124
           DGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY
Sbjct: 187 DGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 245

[Close]

BLAST of CsGy2G008270 vs. TrEMBL
Match: tr|A0A1S3B4X9|A0A1S3B4X9_CUCME (ALBINO3-like protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485819 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.1e-58
Identity = 115/119 (96.64%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 5   QLFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYY 64
           +LFLSGHPTEVEGVDLLILASQWAGVA IRQGKMVEGIAHLERVAN+KEPEEPKSKAHYY
Sbjct: 456 KLFLSGHPTEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERVANMKEPEEPKSKAHYY 515

Query: 65  DGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 124
           DGLVLLASALYNEGRKAEATKYLKSAVAYNPAYK YLDQCEDDNDKLVGDLVSSRRGDY
Sbjct: 516 DGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKVYLDQCEDDNDKLVGDLVSSRRGDY 574

[Close]

BLAST of CsGy2G008270 vs. TrEMBL
Match: tr|A0A2I4EMI5|A0A2I4EMI5_9ROSI (ALBINO3-like protein 2, chloroplastic OS=Juglans regia OX=51240 GN=LOC108990931 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.9e-44
Identity = 90/119 (75.63%), Postives = 99/119 (83.19%), Query Frame = 0


Query: 5   QLFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYY 64
           +L L+G PT VE VDLLIL+SQWAGVA  RQGK  EGI HLERVA++KEPEEP  KAHY+
Sbjct: 443 KLILAGDPTSVEDVDLLILSSQWAGVACTRQGKKAEGIVHLERVASMKEPEEPTCKAHYF 502

Query: 65  DGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 124
           DGLVLLASALYNEGRK EA KYL+ A AYNPAY EYL+QCE+D D  V DLVSSRRGDY
Sbjct: 503 DGLVLLASALYNEGRKTEAAKYLRLAAAYNPAYNEYLEQCENDEDNFVSDLVSSRRGDY 561

[Close]

BLAST of CsGy2G008270 vs. TrEMBL
Match: tr|A0A2P4J3A4|A0A2P4J3A4_QUESU (Albino3-like protein 3, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_14302 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.9e-44
Identity = 89/119 (74.79%), Postives = 102/119 (85.71%), Query Frame = 0


Query: 5   QLFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYY 64
           +LFL+G+PT+VE  DL+IL+SQWAGVA IRQGK  EGI HLERVA+LKEP++PKSKAHY+
Sbjct: 123 KLFLAGNPTDVENTDLIILSSQWAGVACIRQGKWAEGIIHLERVASLKEPDDPKSKAHYF 182

Query: 65  DGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 124
           DGLVLLASALYNEG K EA  YL+ A AYNPAYKEYL+QCE+  D  V DLVSSRRGDY
Sbjct: 183 DGLVLLASALYNEGLKTEAANYLRYAAAYNPAYKEYLEQCENGEDVFVSDLVSSRRGDY 241

[Close]

BLAST of CsGy2G008270 vs. TrEMBL
Match: tr|A0A2N9ENW1|A0A2N9ENW1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4141 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.1e-43
Identity = 88/119 (73.95%), Postives = 100/119 (84.03%), Query Frame = 0


Query: 5   QLFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYY 64
           +LF +  P +VE VDLLIL+SQWAGVA+IRQGK  EGI+HLERVA+LKEPE+PKSK HY+
Sbjct: 227 KLFFAADPADVENVDLLILSSQWAGVAYIRQGKNAEGISHLERVASLKEPEDPKSKVHYF 286

Query: 65  DGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 124
           DGLVLLASALYNEGRK EA  YL+ A AYNPAY EYL+QCE+D D  V DLVSSRR DY
Sbjct: 287 DGLVLLASALYNEGRKTEAANYLRFAAAYNPAYNEYLEQCENDEDVFVSDLVSSRRRDY 345

The following BLAST results are available for this feature:

BLAST of CsGy2G008270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138896.1	3.3e-60	99.16	PREDICTED: ALBINO3-like protein 2, chloroplastic [Cucumis sativus]	[more]
KGN61345.1	3.3e-60	99.16	hypothetical protein Csa_2G094360 [Cucumis sativus]	[more]
XP_008441758.1	3.1e-58	96.64	PREDICTED: ALBINO3-like protein 2, chloroplastic [Cucumis melo]	[more]
XP_022933144.1	2.6e-57	94.12	ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita moschata]	[more]
XP_022973910.1	7.7e-57	93.28	ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita maxima]	[more]

BLAST of CsGy2G008270 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G44370.1	5.9e-35	67.33	Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain	[more]
AT1G65080.1	2.5e-33	55.83	Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain	[more]

BLAST of CsGy2G008270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q0WUC5\|ALB33_ARATH	1.1e-33	67.33	ALBINO3-like protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALB3L3 ...	[more]
sp\|Q8L718\|ALB32_ARATH	4.5e-32	55.83	ALBINO3-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALB3L2 ...	[more]

BLAST of CsGy2G008270 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LHD0\|A0A0A0LHD0_CUCSA	2.2e-60	99.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G094360 PE=4 SV=1	[more]
tr\|A0A1S3B4X9\|A0A1S3B4X9_CUCME	2.1e-58	96.64	ALBINO3-like protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485819 PE...	[more]
tr\|A0A2I4EMI5\|A0A2I4EMI5_9ROSI	2.9e-44	75.63	ALBINO3-like protein 2, chloroplastic OS=Juglans regia OX=51240 GN=LOC108990931 ...	[more]
tr\|A0A2P4J3A4\|A0A2P4J3A4_QUESU	2.9e-44	74.79	Albino3-like protein 3, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_14302 P...	[more]
tr\|A0A2N9ENW1\|A0A2N9ENW1_FAGSY	1.1e-43	73.95	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4141 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051205	protein insertion into membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G008270.1	CsGy2G008270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 19..111 e-value: 6.6E-8 score: 34.2
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 24..102

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G008270	Csa2G094360	Cucumber (Chinese Long) v2	cgybcuB056
CsGy2G008270	CSPI02G07990	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G008270	Lsi11G009450	Bottle gourd (USVL1VR-Ls)	cgyblsiB089

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G008270	Watermelon (97103) v2	cgybwmbB100
CsGy2G008270	Watermelon (97103) v2	cgybwmbB104
CsGy2G008270	Wax gourd	cgybwgoB134
CsGy2G008270	Cucurbita maxima (Rimu)	cgybcmaB252
CsGy2G008270	Cucurbita moschata (Rifu)	cgybcmoB240
CsGy2G008270	Cucurbita moschata (Rifu)	cgybcmoB246
CsGy2G008270	Cucurbita pepo (Zucchini)	cgybcpeB171
CsGy2G008270	Melon (DHL92) v3.6.1	cgybmedB115
CsGy2G008270	Melon (DHL92) v3.5.1	cgybmeB117
CsGy2G008270	Melon (DHL92) v3.5.1	cgybmeB124
CsGy2G008270	Melon (DHL92) v3.6.1	cgybmedB122
CsGy2G008270	Watermelon (Charleston Gray)	cgybwcgB102
CsGy2G008270	Watermelon (Charleston Gray)	cgybwcgB106
CsGy2G008270	Watermelon (97103) v1	cgybwmB150
CsGy2G008270	Silver-seed gourd	carcgybB0249
CsGy2G008270	Cucumber (Chinese Long) v3	cgybcucB064