CsGy2G004000 (gene) Cucumber (Gy14) v2

NameCsGy2G004000
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionHexosyltransferase
LocationChr2 : 2706012 .. 2706254 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATCACCAAATATTTGCAAGTGATTCAGCTCATGCAAAATGGTGGCAAGTTTATGAATCCATGCCCACTGAATTACAACATTTTTGTGGTCTCACAAAGAAGATGGATTCAAGAATAAGAAAATGGAGAAGTATTGCAAGAAATAACTCCACTTTTACCGATGCTCATTGGAAGATCAATATCACTGACCCTAGACGACTCCGTTTTATGGATGATCAGGCTCCTCTTCATCAATAA

mRNA sequence

ATGGAAGATCACCAAATATTTGCAAGTGATTCAGCTCATGCAAAATGGTGGCAAGTTTATGAATCCATGCCCACTGAATTACAACATTTTTGTGGTCTCACAAAGAAGATGGATTCAAGAATAAGAAAATGGAGAAGTATTGCAAGAAATAACTCCACTTTTACCGATGCTCATTGGAAGATCAATATCACTGACCCTAGACGACTCCGTTTTATGGATGATCAGGCTCCTCTTCATCAATAA

Coding sequence (CDS)

ATGGAAGATCACCAAATATTTGCAAGTGATTCAGCTCATGCAAAATGGTGGCAAGTTTATGAATCCATGCCCACTGAATTACAACATTTTTGTGGTCTCACAAAGAAGATGGATTCAAGAATAAGAAAATGGAGAAGTATTGCAAGAAATAACTCCACTTTTACCGATGCTCATTGGAAGATCAATATCACTGACCCTAGACGACTCCGTTTTATGGATGATCAGGCTCCTCTTCATCAATAA

Protein sequence

MEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWKINITDPRRLRFMDDQAPLHQ
BLAST of CsGy2G004000 vs. NCBI nr
Match: XP_004139358.1 (PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 [Cucumis sativus] >KGN60903.1 hypothetical protein Csa_2G021740 [Cucumis sativus])

HSP 1 Score: 176.8 bits (447), Expect = 3.0e-41
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0

Query: 1   MEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWK 60
           MEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWK
Sbjct: 528 MEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWK 587

Query: 61  INITDPRRLRFMDDQAPLHQ 81
           INITDPRRLRFMDDQAPLHQ
Sbjct: 588 INITDPRRLRFMDDQAPLHQ 607

BLAST of CsGy2G004000 vs. NCBI nr
Match: XP_008454698.1 (PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 isoform X2 [Cucumis melo])

HSP 1 Score: 156.8 bits (395), Expect = 3.2e-35
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 0

Query: 1   MEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWK 60
           MEDHQIFASDSAHAKWWQ+YESMPTELQHFCGLTKKMDSRIRKWR IARNNSTF DAHWK
Sbjct: 536 MEDHQIFASDSAHAKWWQIYESMPTELQHFCGLTKKMDSRIRKWRRIARNNSTFADAHWK 595

Query: 61  INITDPRRLRFMDDQAP 78
           I ITDPRR R MDD AP
Sbjct: 596 IKITDPRRHRLMDDHAP 612

BLAST of CsGy2G004000 vs. NCBI nr
Match: XP_008454693.1 (PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 isoform X1 [Cucumis melo] >ABR67414.1 glycosyl transferase [Cucumis melo subsp. melo])

HSP 1 Score: 156.8 bits (395), Expect = 3.2e-35
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 0

Query: 1   MEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWK 60
           MEDHQIFASDSAHAKWWQ+YESMPTELQHFCGLTKKMDSRIRKWR IARNNSTF DAHWK
Sbjct: 538 MEDHQIFASDSAHAKWWQIYESMPTELQHFCGLTKKMDSRIRKWRRIARNNSTFADAHWK 597

Query: 61  INITDPRRLRFMDDQAP 78
           I ITDPRR R MDD AP
Sbjct: 598 IKITDPRRHRLMDDHAP 614

BLAST of CsGy2G004000 vs. NCBI nr
Match: XP_022150786.1 (putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 [Momordica charantia])

HSP 1 Score: 131.0 bits (328), Expect = 1.9e-27
Identity = 60/73 (82.19%), Postives = 64/73 (87.67%), Query Frame = 0

Query: 1   MEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNST-FTDAHW 60
           M DH  FASDSAHAKWW+VYE+MPTELQ FCGLTKKMDSRIRKWR IA+NN+T F DAHW
Sbjct: 502 MADHHAFASDSAHAKWWKVYEAMPTELQQFCGLTKKMDSRIRKWRRIAKNNATNFPDAHW 561

Query: 61  KINITDPRRLRFM 73
           KI ITDPRR RFM
Sbjct: 562 KIKITDPRRHRFM 574

BLAST of CsGy2G004000 vs. NCBI nr
Match: XP_022999266.1 (putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [Cucurbita maxima])

HSP 1 Score: 131.0 bits (328), Expect = 1.9e-27
Identity = 60/74 (81.08%), Postives = 64/74 (86.49%), Query Frame = 0

Query: 2   EDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWKI 61
           EDHQIFASDSAHAKWW+VYE+MP ELQ FCGLTKKMD R+RKWRS AR NS+F DAHWKI
Sbjct: 522 EDHQIFASDSAHAKWWEVYEAMPAELQPFCGLTKKMDFRLRKWRSFAR-NSSFPDAHWKI 581

Query: 62  NITDPRRLRFMDDQ 76
            I DPRR RFMD Q
Sbjct: 582 KIKDPRRRRFMDQQ 594

BLAST of CsGy2G004000 vs. TAIR10
Match: AT1G54940.1 (plant glycogenin-like starch initiation protein 4)

HSP 1 Score: 88.2 bits (217), Expect = 2.5e-18
Identity = 35/72 (48.61%), Postives = 50/72 (69.44%), Query Frame = 0

Query: 1   MEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWK 60
           + + ++FASDS H KWW+VY+ M  +L+ +CGL K M+ RI KWR IA+NNS   D HW+
Sbjct: 485 ISERRVFASDSVHEKWWKVYDKMSEQLKGYCGLNKNMEKRIEKWRRIAKNNS-LPDRHWE 544

Query: 61  INITDPRRLRFM 73
           I + DPR+   +
Sbjct: 545 IEVRDPRKTNLL 555

BLAST of CsGy2G004000 vs. TAIR10
Match: AT1G08990.1 (plant glycogenin-like starch initiation protein 5)

HSP 1 Score: 81.3 bits (199), Expect = 3.1e-16
Identity = 31/68 (45.59%), Postives = 49/68 (72.06%), Query Frame = 0

Query: 1   MEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWK 60
           ++  +++AS+S HA+WW+VY+ MP +L+ +CGL  KM+  + KWR +A+ N  F + HWK
Sbjct: 494 LKTRRVYASESVHARWWKVYDKMPKKLKGYCGLNLKMEKNVEKWRKMAKLNG-FPENHWK 553

Query: 61  INITDPRR 69
           I I DPR+
Sbjct: 554 IRIKDPRK 560

BLAST of CsGy2G004000 vs. TAIR10
Match: AT4G33330.2 (plant glycogenin-like starch initiation protein 3)

HSP 1 Score: 74.7 bits (182), Expect = 2.9e-14
Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = 0

Query: 1   MEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWK 60
           +++  ++ASD+AH +WW+V++SM   LQ FC LTKK  + I   R  AR   + TD HWK
Sbjct: 523 VDEQLVYASDAAHVRWWKVHDSMDDALQKFCRLTKKRRTEINWERRKARLRGS-TDYHWK 582

Query: 61  INITDPRR 69
           IN+TDPRR
Sbjct: 583 INVTDPRR 589

BLAST of CsGy2G004000 vs. TAIR10
Match: AT3G18660.2 (plant glycogenin-like starch initiation protein 1)

HSP 1 Score: 62.4 bits (150), Expect = 1.5e-10
Identity = 27/61 (44.26%), Postives = 37/61 (60.66%), Query Frame = 0

Query: 7   FASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWKINITDP 66
           FA+D AH KWW V+++MP EL  FC L  K  +++   R  A   + + D HWKI + DP
Sbjct: 551 FATDIAHRKWWMVHDAMPQELHQFCYLRSKQKAQLEYDRRQA-EAANYADGHWKIRVKDP 610

Query: 67  R 68
           R
Sbjct: 611 R 610

BLAST of CsGy2G004000 vs. Swiss-Prot
Match: sp|Q9FZ37|GUX4_ARATH (Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GUX4 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 4.5e-17
Identity = 35/72 (48.61%), Postives = 50/72 (69.44%), Query Frame = 0

Query: 1   MEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWK 60
           + + ++FASDS H KWW+VY+ M  +L+ +CGL K M+ RI KWR IA+NNS   D HW+
Sbjct: 485 ISERRVFASDSVHEKWWKVYDKMSEQLKGYCGLNKNMEKRIEKWRRIAKNNS-LPDRHWE 544

Query: 61  INITDPRRLRFM 73
           I + DPR+   +
Sbjct: 545 IEVRDPRKTNLL 555

BLAST of CsGy2G004000 vs. Swiss-Prot
Match: sp|F4HZC3|GUX5_ARATH (Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 OS=Arabidopsis thaliana OX=3702 GN=GUX5 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 5.5e-15
Identity = 31/68 (45.59%), Postives = 49/68 (72.06%), Query Frame = 0

Query: 1   MEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWK 60
           ++  +++AS+S HA+WW+VY+ MP +L+ +CGL  KM+  + KWR +A+ N  F + HWK
Sbjct: 494 LKTRRVYASESVHARWWKVYDKMPKKLKGYCGLNLKMEKNVEKWRKMAKLNG-FPENHWK 553

Query: 61  INITDPRR 69
           I I DPR+
Sbjct: 554 IRIKDPRK 560

BLAST of CsGy2G004000 vs. Swiss-Prot
Match: sp|Q8GWW4|GUX2_ARATH (UDP-glucuronate:xylan alpha-glucuronosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=GUX2 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.3e-13
Identity = 35/70 (50.00%), Postives = 48/70 (68.57%), Query Frame = 0

Query: 1   MEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWK 60
           +++  ++ASD+AH +WW+V++SM   LQ FC LTKK  + I   R  AR   + TD HWK
Sbjct: 523 VDEQLVYASDAAHVRWWKVHDSMDDALQKFCRLTKKRRTEINWERRKARLRGS-TDYHWK 582

Query: 61  INITDPRRLR 71
           IN+TDPRR R
Sbjct: 583 INVTDPRRRR 591

BLAST of CsGy2G004000 vs. Swiss-Prot
Match: sp|Q9LSB1|GUX1_ARATH (UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=GUX1 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.7e-09
Identity = 27/61 (44.26%), Postives = 37/61 (60.66%), Query Frame = 0

Query: 7   FASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWKINITDP 66
           FA+D AH KWW V+++MP EL  FC L  K  +++   R  A   + + D HWKI + DP
Sbjct: 551 FATDIAHRKWWMVHDAMPQELHQFCYLRSKQKAQLEYDRRQA-EAANYADGHWKIRVKDP 610

Query: 67  R 68
           R
Sbjct: 611 R 610

BLAST of CsGy2G004000 vs. TrEMBL
Match: tr|A0A0A0LGC4|A0A0A0LGC4_CUCSA (Hexosyltransferase OS=Cucumis sativus OX=3659 GN=Csa_2G021740 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.0e-41
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0

Query: 1   MEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWK 60
           MEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWK
Sbjct: 528 MEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWK 587

Query: 61  INITDPRRLRFMDDQAPLHQ 81
           INITDPRRLRFMDDQAPLHQ
Sbjct: 588 INITDPRRLRFMDDQAPLHQ 607

BLAST of CsGy2G004000 vs. TrEMBL
Match: tr|A0A1S3BZB2|A0A1S3BZB2_CUCME (Hexosyltransferase OS=Cucumis melo OX=3656 GN=LOC103495046 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.1e-35
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 0

Query: 1   MEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWK 60
           MEDHQIFASDSAHAKWWQ+YESMPTELQHFCGLTKKMDSRIRKWR IARNNSTF DAHWK
Sbjct: 538 MEDHQIFASDSAHAKWWQIYESMPTELQHFCGLTKKMDSRIRKWRRIARNNSTFADAHWK 597

Query: 61  INITDPRRLRFMDDQAP 78
           I ITDPRR R MDD AP
Sbjct: 598 IKITDPRRHRLMDDHAP 614

BLAST of CsGy2G004000 vs. TrEMBL
Match: tr|A0A1S3BZZ5|A0A1S3BZZ5_CUCME (Hexosyltransferase OS=Cucumis melo OX=3656 GN=LOC103495046 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.1e-35
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 0

Query: 1   MEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWK 60
           MEDHQIFASDSAHAKWWQ+YESMPTELQHFCGLTKKMDSRIRKWR IARNNSTF DAHWK
Sbjct: 536 MEDHQIFASDSAHAKWWQIYESMPTELQHFCGLTKKMDSRIRKWRRIARNNSTFADAHWK 595

Query: 61  INITDPRRLRFMDDQAP 78
           I ITDPRR R MDD AP
Sbjct: 596 IKITDPRRHRLMDDHAP 612

BLAST of CsGy2G004000 vs. TrEMBL
Match: tr|A6YTD3|A6YTD3_CUCME (Hexosyltransferase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.1e-35
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 0

Query: 1   MEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWK 60
           MEDHQIFASDSAHAKWWQ+YESMPTELQHFCGLTKKMDSRIRKWR IARNNSTF DAHWK
Sbjct: 538 MEDHQIFASDSAHAKWWQIYESMPTELQHFCGLTKKMDSRIRKWRRIARNNSTFADAHWK 597

Query: 61  INITDPRRLRFMDDQAP 78
           I ITDPRR R MDD AP
Sbjct: 598 IKITDPRRHRLMDDHAP 614

BLAST of CsGy2G004000 vs. TrEMBL
Match: tr|A0A1Q3B583|A0A1Q3B583_CEPFO (Hexosyltransferase OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_06687 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.9e-20
Identity = 47/72 (65.28%), Postives = 56/72 (77.78%), Query Frame = 0

Query: 1   MEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWK 60
           M+D   FASDSAH KWWQVY++MP +LQ FCGLT+KMDSRI KWR +AR  +   D HWK
Sbjct: 444 MKDRHQFASDSAHKKWWQVYDAMPKKLQKFCGLTEKMDSRIHKWRGVAR-RTNLPDGHWK 503

Query: 61  INITDPRRLRFM 73
           I ITDPR+ RF+
Sbjct: 504 IKITDPRQYRFV 514

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004139358.13.0e-41100.00PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 [Cucum... [more]
XP_008454698.13.2e-3590.91PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 isofor... [more]
XP_008454693.13.2e-3590.91PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 isofor... [more]
XP_022150786.11.9e-2782.19putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 [Momordica charan... [more]
XP_022999266.11.9e-2781.08putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [Cucurbita maxima... [more]
Match NameE-valueIdentityDescription
AT1G54940.12.5e-1848.61plant glycogenin-like starch initiation protein 4[more]
AT1G08990.13.1e-1645.59plant glycogenin-like starch initiation protein 5[more]
AT4G33330.22.9e-1450.00plant glycogenin-like starch initiation protein 3[more]
AT3G18660.21.5e-1044.26plant glycogenin-like starch initiation protein 1[more]
Match NameE-valueIdentityDescription
sp|Q9FZ37|GUX4_ARATH4.5e-1748.61Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 OS=Arabidopsis th... [more]
sp|F4HZC3|GUX5_ARATH5.5e-1545.59Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 OS=Arabidopsis th... [more]
sp|Q8GWW4|GUX2_ARATH2.3e-1350.00UDP-glucuronate:xylan alpha-glucuronosyltransferase 2 OS=Arabidopsis thaliana OX... [more]
sp|Q9LSB1|GUX1_ARATH2.7e-0944.26UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LGC4|A0A0A0LGC4_CUCSA2.0e-41100.00Hexosyltransferase OS=Cucumis sativus OX=3659 GN=Csa_2G021740 PE=3 SV=1[more]
tr|A0A1S3BZB2|A0A1S3BZB2_CUCME2.1e-3590.91Hexosyltransferase OS=Cucumis melo OX=3656 GN=LOC103495046 PE=3 SV=1[more]
tr|A0A1S3BZZ5|A0A1S3BZZ5_CUCME2.1e-3590.91Hexosyltransferase OS=Cucumis melo OX=3656 GN=LOC103495046 PE=3 SV=1[more]
tr|A6YTD3|A6YTD3_CUCME2.1e-3590.91Hexosyltransferase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1[more]
tr|A0A1Q3B583|A0A1Q3B583_CEPFO1.9e-2065.28Hexosyltransferase OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_06687 PE=3 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016757 transferase activity, transferring glycosyl groups

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G004000.1CsGy2G004000.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11183:SF51UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 4-RELATEDcoord: 1..73
NoneNo IPR availablePANTHERPTHR11183GLYCOGENINcoord: 1..73

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None