CsGy2G003610 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G003610
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	cingulin
Location	Chr2 : 2463631 .. 2465382 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAAAAGAAACCCATTAGATCGGCCAAAGAGCTAAAGCAAACACCCAATAACCAGGAGGAAACTAGCGATTCAGAGCAACCCAAGTCTGCTATGGATGATGACTCGAAGTTGCAGAGCTTGAAATCGTTGAACGAACGGCTGCTTAAGGAGATGGTCGAGAAGAGAGTGGAGGTCGGCGATCTTGTTCAGAGTAAGGAAGCATTGGAACTCGACTTGAAGCGGAATGTGAACGAGAAAGAACAGGTAATGGGTGAGTTGAGTGAGGCTCGTGATGGGGTTTATGGGTTGGAATTAGAGAGGAATGTTGTTTGTGTTTATCTGCAGAGTCGAATACAAGAAATGGGTGGTGGGATTTGTGGGTTACTCGAGAGTGAGAGAGTTAAGGGTTTAGAGATTAGGAATTTGAAGGCTGAGATTACTGGGCTTGTTTCGGAGGTTGGGGAAGAGAGGGAGAAATGGAGGGGAGTGTGTTGTGAGAGGGATGAGACTAAGGTTGAGTTTGATGGGTTATTGAAGGAAACAGGGGATTTGAGAGGCAAGGTGGTTGAAATGGAGAGAAATGAGAGAAGGGCATTGGAAGAGATTGATGATCTGAAGGGAAAATGCAAGAAGTTGTTGAGTGAAAAAAAGGAATGTGAGATTTTGAATGCGAATCTGACGAAAGACAATGAATTAATTAAGAAGTTGTTGGAGGAATCAGGCAGGGTAATTGAAGATTTAGAGAGGAAAGTGGATGTGAAAATGAAGGAGAAAGGTGAGATTGAAAAGGAAAAAAATGGGCTGGAAATGGAGGTTGAGAAGTTAGAGAAGGAAGTTACTCAATTAAAACAGAGTACATTCTGTTTGAAACAGGAAAAGGAAGAGAACGGGATGAGAATTTATGAGCTTCAAATGAGAAATGAAGAAGCTTTGGTGAAAGAAAGTGGGATGCTGATGGAGTGTGATCTTCTTGTCGAAGAGTTGCAGAAGAAGGAGAAAGCAATGGAGGAGGCGAAAACTGAAGCACAGAATATTATTGGGGACTTGCAAAAGGAATCAAGTAAATTAAAAGAAGCTATAGCTTCGTTGACCAAGATGAGTGATGTCGGGAAAGCAAGAAACGAGGAATTAATAAACCAAATAGGTCGTCTTCGTGATACTTTGGATGAAGTTTCATTTGAGAGGGATGATGCTAGAAAGAGATTTGGTGATGAGAAGGAAAAAGTTGAGAAGCTGAGTCTGTTACTCAAAGACAAGGAGAGAAGAATTGAAGAAGCCATAAAAGAAGTAGAGAAAGCAAAGATTGCACAAGAAGAGGAATCACTGAATGTGAAGAAGGAGATGGAGAGGCGGATCAATGCCTTGATCGGGGAAAGGGAGTTAATGGAGAAAAACTTGTTGGCGGCAAAGAGTAGAATTGATGAACTGAAAGCGAAAGTAAATTCAGCAGTTTGTAATTCAGAGAAAGCATTGTCATTGTTGAAGAAAACACGTTTGACTGTTTGTGATGGTTATGGGAAAAGAGAAGTGGAAGAAGTTTCTTCTGACGAGCATAAGGTTGGTAAAGAGATGCAGCCATTTGTTGAACATTTGGATGCAATAAAAACATCCTTCACAAACAAGGAGAAAGCTGTGGAAGAAATGACACGAGTTCTCGAAACTGAACGAATGGAACAACAAAAGAAGAAGAGCTTCTTCACCGTAGTGACTGCAGCAACAACAATATTGGCTGCTGTTTCTGCTCTTTATGTTAGCAAAGGGCGCTGA

mRNA sequence

ATGGCGAAAAAGAAACCCATTAGATCGGCCAAAGAGCTAAAGCAAACACCCAATAACCAGGAGGAAACTAGCGATTCAGAGCAACCCAAGTCTGCTATGGATGATGACTCGAAGTTGCAGAGCTTGAAATCGTTGAACGAACGGCTGCTTAAGGAGATGGTCGAGAAGAGAGTGGAGGTCGGCGATCTTGTTCAGAGTAAGGAAGCATTGGAACTCGACTTGAAGCGGAATGTGAACGAGAAAGAACAGGTAATGGGTGAGTTGAGTGAGGCTCGTGATGGGGTTTATGGGTTGGAATTAGAGAGGAATGTTGTTTGTGTTTATCTGCAGAGTCGAATACAAGAAATGGGTGGTGGGATTTGTGGGTTACTCGAGAGTCGTCTTCGTGATACTTTGGATGAAGTTTCATTTGAGAGGGATGATGCTAGAAAGAGATTTGGTGATGAGAAGGAAAAAGTTGAGAAGCTGAGTCTGTTACTCAAAGACAAGGAGAGAAGAATTGAAGAAGCCATAAAAGAAGTAGAGAAAGCAAAGATTGCACAAGAAGAGGAATCACTGAATGTGAAGAAGGAGATGGAGAGGCGGATCAATGCCTTGATCGGGGAAAGGGAGTTAATGGAGAAAAACTTGTTGGCGGCAAAGAGTAGAATTGATGAACTGAAAGCGAAAGTAAATTCAGCAGTTTGTAATTCAGAGAAAGCATTGTCATTGTTGAAGAAAACACGTTTGACTGTTTGTGATGGTTATGGGAAAAGAGAAGTGGAAGAAGTTTCTTCTGACGAGCATAAGGTTGGTAAAGAGATGCAGCCATTTGTTGAACATTTGGATGCAATAAAAACATCCTTCACAAACAAGGAGAAAGCTGTGGAAGAAATGACACGAGTTCTCGAAACTGAACGAATGGAACAACAAAAGAAGAAGAGCTTCTTCACCGTAGTGACTGCAGCAACAACAATATTGGCTGCTGTTTCTGCTCTTTATGTTAGCAAAGGGCGCTGA

Coding sequence (CDS)

ATGGCGAAAAAGAAACCCATTAGATCGGCCAAAGAGCTAAAGCAAACACCCAATAACCAGGAGGAAACTAGCGATTCAGAGCAACCCAAGTCTGCTATGGATGATGACTCGAAGTTGCAGAGCTTGAAATCGTTGAACGAACGGCTGCTTAAGGAGATGGTCGAGAAGAGAGTGGAGGTCGGCGATCTTGTTCAGAGTAAGGAAGCATTGGAACTCGACTTGAAGCGGAATGTGAACGAGAAAGAACAGGTAATGGGTGAGTTGAGTGAGGCTCGTGATGGGGTTTATGGGTTGGAATTAGAGAGGAATGTTGTTTGTGTTTATCTGCAGAGTCGAATACAAGAAATGGGTGGTGGGATTTGTGGGTTACTCGAGAGTCGTCTTCGTGATACTTTGGATGAAGTTTCATTTGAGAGGGATGATGCTAGAAAGAGATTTGGTGATGAGAAGGAAAAAGTTGAGAAGCTGAGTCTGTTACTCAAAGACAAGGAGAGAAGAATTGAAGAAGCCATAAAAGAAGTAGAGAAAGCAAAGATTGCACAAGAAGAGGAATCACTGAATGTGAAGAAGGAGATGGAGAGGCGGATCAATGCCTTGATCGGGGAAAGGGAGTTAATGGAGAAAAACTTGTTGGCGGCAAAGAGTAGAATTGATGAACTGAAAGCGAAAGTAAATTCAGCAGTTTGTAATTCAGAGAAAGCATTGTCATTGTTGAAGAAAACACGTTTGACTGTTTGTGATGGTTATGGGAAAAGAGAAGTGGAAGAAGTTTCTTCTGACGAGCATAAGGTTGGTAAAGAGATGCAGCCATTTGTTGAACATTTGGATGCAATAAAAACATCCTTCACAAACAAGGAGAAAGCTGTGGAAGAAATGACACGAGTTCTCGAAACTGAACGAATGGAACAACAAAAGAAGAAGAGCTTCTTCACCGTAGTGACTGCAGCAACAACAATATTGGCTGCTGTTTCTGCTCTTTATGTTAGCAAAGGGCGCTGA

Protein sequence

MAKKKPIRSAKELKQTPNNQEETSDSEQPKSAMDDDSKLQSLKSLNERLLKEMVEKRVEVGDLVQSKEALELDLKRNVNEKEQVMGELSEARDGVYGLELERNVVCVYLQSRIQEMGGGICGLLESRLRDTLDEVSFERDDARKRFGDEKEKVEKLSLLLKDKERRIEEAIKEVEKAKIAQEEESLNVKKEMERRINALIGERELMEKNLLAAKSRIDELKAKVNSAVCNSEKALSLLKKTRLTVCDGYGKREVEEVSSDEHKVGKEMQPFVEHLDAIKTSFTNKEKAVEEMTRVLETERMEQQKKKSFFTVVTAATTILAAVSALYVSKGR

Homology

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BLAST of CsGy2G003610 vs. NCBI nr
Match: XP_008455286.1 (PREDICTED: cingulin [Cucumis melo])

HSP 1 Score: 396.7 bits (1018), Expect = 7.5e-107
Identity = 305/621 (49.11%), Postives = 318/621 (51.21%), Query Frame = 0


Query: 1   MAKKKPIRSAKELKQTPNNQEETSDSEQPKSAMDDDSKLQSLKSLNERLLKEMVEKRVEV 60
           MAKKKP RSAKE KQ PNNQEETSDSEQP+SAMDDDSKLQSLKSLNERLLKEMVEKRV V
Sbjct: 1   MAKKKPTRSAKEPKQIPNNQEETSDSEQPRSAMDDDSKLQSLKSLNERLLKEMVEKRVVV 60

Query: 61  GDLVQSKEALELDLKRNVNEKEQVMGELSEARDGVYGLELERNVVCVYLQSRIQEMGGGI 120
           GDLVQ+KEALELDLKRNVNEKEQVMGELSEARDGVYGLELERNVVCVYLQSRI+EM GGI
Sbjct: 61  GDLVQTKEALELDLKRNVNEKEQVMGELSEARDGVYGLELERNVVCVYLQSRIEEMSGGI 120

Query: 121 CGLLES------------------------------------------------------ 180
            GLLES                                                      
Sbjct: 121 FGLLESERVKGLEIRNLKAEINGLVLEVEEEREKWRGVCCERDEIKVEFDGLLKETGDLR 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 GKVVEMERNERRTLEEIDDLKGKCKKLLSEKKEREILNGNLTKDNELIKKLLEESGRVIE 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 DLERKVDVKMKEKGXXXXXXXXXXXXXXXXXXXXXXXXXXTFCFKQXKEENGKRISELQM 300

Query: 301 ------------------------------------------------------------ 333
                                                                       
Sbjct: 301 RIEEALVKESGMLMEFDVLVKELQKKENAMEMLTQQRDSLDVNLNLIQEEAKSLQRTLEI 360

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BLAST of CsGy2G003610 vs. NCBI nr
Match: KGN60859.1 (hypothetical protein Csa_2G015350 [Cucumis sativus])

HSP 1 Score: 371.7 bits (953), Expect = 2.6e-99
Identity = 287/516 (55.62%), Postives = 306/516 (59.30%), Query Frame = 0


Query: 1   MAKKKPIRSAKELKQTPNNQEETSDSEQPKSAMDDDSKLQSLKSLNERLLKEMVEKRVEV 60
           MAKKKP RSAKELKQTPNNQEETSDSEQPKSAMDDDSKLQSLKSLNERLLKEMVEKRVEV
Sbjct: 1   MAKKKPTRSAKELKQTPNNQEETSDSEQPKSAMDDDSKLQSLKSLNERLLKEMVEKRVEV 60

Query: 61  GDLVQSKEALELDLKRNVNEKEQVMGELSEARDGVYGLELERNVVCVYLQSRIQEMGGGI 120
           GDLVQSKEALELDLKRNVNEKEQVMGELSEARDGVYGLELERNVVCVYLQSRIQEMGGGI
Sbjct: 61  GDLVQSKEALELDLKRNVNEKEQVMGELSEARDGVYGLELERNVVCVYLQSRIQEMGGGI 120

Query: 121 CGLLES------RLRDTLDE--------VSFERDDAR------------KRFGDEKEKVE 180
           CGLLES       +R+   E        V  ER++ R            K+   EK++ E
Sbjct: 121 CGLLESERVKGLEIRNLKAEITGLVSEVVEMERNERRALEEIDDLKGKCKKLLSEKKECE 180

Query: 181 KLSL-LLKDKE---RRIEEA---------------------------------------- 240
            L+  L KD E   + +EE+                                        
Sbjct: 181 ILNANLTKDNELIKKLLEESGRVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 -----------IKEVEKAKI----AQEEESLNVKKEMER--------------------- 300
                       KE    +I     + EE+LN+  ++++                     
Sbjct: 241 XXXXXXXXXXXXKEENGMRIYELQMRNEEALNIIGDLQKESSKLKEAIASLTKMSDVGKA 300

Query: 301 ------------------------------------------------------------ 333
                                                                       
Sbjct: 301 RNEELINQIGRLRDTLDEVSFERDDARKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

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BLAST of CsGy2G003610 vs. NCBI nr
Match: XP_011648795.1 (PREDICTED: desmoplakin [Cucumis sativus])

HSP 1 Score: 336.7 bits (862), Expect = 9.3e-89
Identity = 281/583 (48.20%), Postives = 298/583 (51.11%), Query Frame = 0


Query: 1   MAKKKPIRSAKELKQTPNNQEETSDSEQPKSAMDDDSKLQSLKSLNERLLKEMVEKRVEV 60
           MAKKKP RSAKELKQTPNNQEETSDSEQPKSAMDDDSKLQSLKSLNERLLKEMVEKRVEV
Sbjct: 1   MAKKKPTRSAKELKQTPNNQEETSDSEQPKSAMDDDSKLQSLKSLNERLLKEMVEKRVEV 60

Query: 61  GDLVQSKEALELDLKRNVNEKEQVMGELSEARDGVYGLELERNVVCVYLQSRIQEMGGGI 120
           GDLVQSKEALELDLKRNVNEKEQVMGELSEARDGVYGLELERNVVCVYLQSRIQEMGGGI
Sbjct: 61  GDLVQSKEALELDLKRNVNEKEQVMGELSEARDGVYGLELERNVVCVYLQSRIQEMGGGI 120

Query: 121 CGLLESRLRDTL------------------------------DEVSFERDDARKRFGDEK 180
           CGLLES     L                              DE+  E D   K  GD +
Sbjct: 121 CGLLESERVKGLEIRNLKAEITGLVSEVGEEREKWRGVCCERDEIKVEFDGLLKETGDLR 180

Query: 181 EKVEKL-------------------SLLLKDKERRI--------EEAIKEV--EKAKI-- 240
            KV ++                    LL + KE  I         E IK++  E  ++  
Sbjct: 181 GKVVEMERNERRALEEIDDLKGKCKKLLSEKKECEILNANLTKDNELIKKLLEESGRVXX 240

Query: 241 ----------------------------------------------AQEEESLNV----- 300
                                                          +EE  + +     
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEENGMRIYELQM 300

Query: 301 -------------------KKEMERRINAL------------------------------ 333
                               KE++++  A+                              
Sbjct: 301 RNEEALVKESGMLMECDLLVKELQKKEKAMEKAKTEAQNIXXXXXXXXXXXXXXXXXXXX 360

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BLAST of CsGy2G003610 vs. NCBI nr
Match: XP_022150832.1 (myosin-2 heavy chain, non muscle-like [Momordica charantia])

HSP 1 Score: 190.7 bits (483), Expect = 8.2e-45
Identity = 195/624 (31.25%), Postives = 237/624 (37.98%), Query Frame = 0


Query: 1   MAKKKPIRSAKELKQTPNNQEETSDSEQPKSAMDDDS--KLQSLKSLNERLLKEMVEKRV 60
           MAKKK  R AKE KQ                A  DDS  KLQSLKSLN+RL+KE  E+R+
Sbjct: 1   MAKKKATRVAKEPKQMXXXXXXXXXXXXXXRAAMDDSVLKLQSLKSLNDRLVKETHERRM 60

Query: 61  EVGDLVQSKEALELDLKRNVNEKEQVMGELSEARDGVYGLELERNVVCVYLQSRIQEMGG 120
           EVG LV++K+ALE+DLKRNV+EK QVMGEL EA +G+YGL+LE+NVV V+LQS+++EMGG
Sbjct: 61  EVGALVKTKDALEIDLKRNVDEKNQVMGELGEACEGIYGLDLEKNVVSVFLQSQMEEMGG 120

Query: 121 GICGLLESR--------------------------------------------------- 180
           GICGL+  +                                                   
Sbjct: 121 GICGLMAEKRESERLKEMEIGLLKAEVNELVLKVEEEREKWRRVRSERDAMKIAFDGLLE 180

Query: 181 --------------------------------------------------LRDTLDE--- 240
                                                             ++  LDE   
Sbjct: 181 ETGDLRGKMERNERMALEEIAGLKGKCEKLMGEKMEIEVVNGTLLKENESVKKLLDESAV 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 VIEDLERKMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 ------------------------------------------------------------ 333
                                                                       
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

[Close]

BLAST of CsGy2G003610 vs. NCBI nr
Match: XP_022938144.1 (polyamine-modulated factor 1-binding protein 1 [Cucurbita moschata])

HSP 1 Score: 182.6 bits (462), Expect = 2.2e-42
Identity = 223/612 (36.44%), Postives = 258/612 (42.16%), Query Frame = 0


Query: 1   MAKKKPIRSAKELKQTPNNQEETSDSEQP--KSAMDDD---SKLQSLKSLNERLLKEMVE 60
           MAKKKP RS  E K+ P++QEE  DSEQ   KSA+D+    S+LQSLKSLNERLLKE  E
Sbjct: 1   MAKKKPTRSGNEPKKVPDHQEENRDSEQQLLKSAVDESVEKSQLQSLKSLNERLLKETHE 60

Query: 61  KRVEVGDLVQSKEALELDLKRNVNEKEQVMGELSEARDGVYGLELERNVVCVYLQSRIQE 120
           KR E G LVQ+KE LELDLK+N +EK+QVM ELS A DGV GLELERNVV VYLQ++++E
Sbjct: 61  KRKEFGALVQAKEGLELDLKKNADEKKQVMCELSVACDGVSGLELERNVVHVYLQTQMEE 120

Query: 121 MGGGICGLLES---------RLR-------------------------------DTLDE- 180
           MGG IC L+ES         RL+                               D L E 
Sbjct: 121 MGGVICRLVESERVKNVEIGRLKGENNGLVLKVEEEREKWMKVCCERDGIKADFDGLFEE 180

Query: 181 --------VSFERDDAR------------------------------------KRFGDE- 240
                   V  E+++ R                                    KR  DE 
Sbjct: 181 TGDLRRKMVEMEKNERRALEEIEDLKVKCKKLSGEKMESEVMNGNLLKEKELVKRLLDES 240

Query: 241 ---------------KEKVE---------------------------------------- 300
                          KEKVE                                        
Sbjct: 241 GRVIEDLERKVDLKTKEKVEVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 ------------------------------------------------------------ 333
                                                                       
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

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BLAST of CsGy2G003610 vs. TAIR10
Match: AT5G27330.1 (Prefoldin chaperone subunit family protein)

HSP 1 Score: 53.9 bits (128), Expect = 2.2e-07
Identity = 64/232 (27.59%), Postives = 121/232 (52.16%), Query Frame = 0


Query: 1   MAKKKPIR----SAKELKQTPNNQEETSDSEQPK----SAMDD----DSKLQSLKSLNER 60
           MAKKK  R    ++ E +Q  N     +  +  K    S+M+D    + K Q+LKSLN  
Sbjct: 1   MAKKKVSRNSNGASNEQQQIQNQSVPVTSQKSTKLSRESSMEDHDSSEEKFQNLKSLNAI 60

Query: 61  LLKEMVEKRVEVGDLVQSKEALELDLKRNVNEKEQVMGELSEARDGVYGLELERNVVCVY 120
           LLK+ +EKR ++  L Q+K++LE++L R+  EK  +  EL  + D  + L++E +++  +
Sbjct: 61  LLKQTMEKRQQIESLFQAKDSLEIELVRSGKEKTLLREELCGSSDENFMLKIEMDLLMGF 120

Query: 121 LQSRIQEMGGGICGLL------ESRLRD-------TLDEVSFERDDARKRFGDEKEKVEK 180
           ++ R++EMG  +  L       E+ +RD        + ++  ER++   R  DE++ V+ 
Sbjct: 121 VEGRVKEMGVEVDWLFKEKSDRETEIRDLKREANGLIRKLESEREEF-SRVCDERDLVKS 180

Query: 181 LSLLLKDKERRIEEAIKEVEKAKIAQEEESLNVKKEMERRINALIGERELME 208
              L  ++   ++E++  +E  +++  EE   +K E  R +       E++E
Sbjct: 181 GFDLQSEEMNLLKESVVRLEMREVSLGEEVGRLKCENGRLVKERKKREEVIE 231

[Close]

BLAST of CsGy2G003610 vs. TrEMBL
Match: tr|A0A1S3C0Q0|A0A1S3C0Q0_CUCME (cingulin OS=Cucumis melo OX=3656 GN=LOC103495485 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 5.0e-107
Identity = 305/621 (49.11%), Postives = 318/621 (51.21%), Query Frame = 0


Query: 1   MAKKKPIRSAKELKQTPNNQEETSDSEQPKSAMDDDSKLQSLKSLNERLLKEMVEKRVEV 60
           MAKKKP RSAKE KQ PNNQEETSDSEQP+SAMDDDSKLQSLKSLNERLLKEMVEKRV V
Sbjct: 1   MAKKKPTRSAKEPKQIPNNQEETSDSEQPRSAMDDDSKLQSLKSLNERLLKEMVEKRVVV 60

Query: 61  GDLVQSKEALELDLKRNVNEKEQVMGELSEARDGVYGLELERNVVCVYLQSRIQEMGGGI 120
           GDLVQ+KEALELDLKRNVNEKEQVMGELSEARDGVYGLELERNVVCVYLQSRI+EM GGI
Sbjct: 61  GDLVQTKEALELDLKRNVNEKEQVMGELSEARDGVYGLELERNVVCVYLQSRIEEMSGGI 120

Query: 121 CGLLES------------------------------------------------------ 180
            GLLES                                                      
Sbjct: 121 FGLLESERVKGLEIRNLKAEINGLVLEVEEEREKWRGVCCERDEIKVEFDGLLKETGDLR 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 GKVVEMERNERRTLEEIDDLKGKCKKLLSEKKEREILNGNLTKDNELIKKLLEESGRVIE 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 DLERKVDVKMKEKGXXXXXXXXXXXXXXXXXXXXXXXXXXTFCFKQXKEENGKRISELQM 300

Query: 301 ------------------------------------------------------------ 333
                                                                       
Sbjct: 301 RIEEALVKESGMLMEFDVLVKELQKKENAMEMLTQQRDSLDVNLNLIQEEAKSLQRTLEI 360

[Close]

BLAST of CsGy2G003610 vs. TrEMBL
Match: tr|A0A0A0LII4|A0A0A0LII4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G015350 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.7e-99
Identity = 287/516 (55.62%), Postives = 306/516 (59.30%), Query Frame = 0


Query: 1   MAKKKPIRSAKELKQTPNNQEETSDSEQPKSAMDDDSKLQSLKSLNERLLKEMVEKRVEV 60
           MAKKKP RSAKELKQTPNNQEETSDSEQPKSAMDDDSKLQSLKSLNERLLKEMVEKRVEV
Sbjct: 1   MAKKKPTRSAKELKQTPNNQEETSDSEQPKSAMDDDSKLQSLKSLNERLLKEMVEKRVEV 60

Query: 61  GDLVQSKEALELDLKRNVNEKEQVMGELSEARDGVYGLELERNVVCVYLQSRIQEMGGGI 120
           GDLVQSKEALELDLKRNVNEKEQVMGELSEARDGVYGLELERNVVCVYLQSRIQEMGGGI
Sbjct: 61  GDLVQSKEALELDLKRNVNEKEQVMGELSEARDGVYGLELERNVVCVYLQSRIQEMGGGI 120

Query: 121 CGLLES------RLRDTLDE--------VSFERDDAR------------KRFGDEKEKVE 180
           CGLLES       +R+   E        V  ER++ R            K+   EK++ E
Sbjct: 121 CGLLESERVKGLEIRNLKAEITGLVSEVVEMERNERRALEEIDDLKGKCKKLLSEKKECE 180

Query: 181 KLSL-LLKDKE---RRIEEA---------------------------------------- 240
            L+  L KD E   + +EE+                                        
Sbjct: 181 ILNANLTKDNELIKKLLEESGRVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 -----------IKEVEKAKI----AQEEESLNVKKEMER--------------------- 300
                       KE    +I     + EE+LN+  ++++                     
Sbjct: 241 XXXXXXXXXXXXKEENGMRIYELQMRNEEALNIIGDLQKESSKLKEAIASLTKMSDVGKA 300

Query: 301 ------------------------------------------------------------ 333
                                                                       
Sbjct: 301 RNEELINQIGRLRDTLDEVSFERDDARKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

[Close]

BLAST of CsGy2G003610 vs. TrEMBL
Match: tr|A0A2I4E931|A0A2I4E931_9ROSI (paramyosin-like OS=Juglans regia OX=51240 GN=LOC108987447 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.5e-21
Identity = 69/173 (39.88%), Postives = 111/173 (64.16%), Query Frame = 0


Query: 126 SRLRDTLDEVSFERDDARKRFGDEKEKVEKLSLLLKDKERRIEEAIKEVEKAKIAQEEES 185
           ++ RD LD V+ ERD+ +K F +E +KV+ +  L+ +KER I+EA++E+ + K ++ E  
Sbjct: 424 TQYRDALDRVTLERDEMQKGFYEENKKVKNMEALVSEKERGIQEAVEELGRMK-SENENL 483

Query: 186 LNVKKEMERRINALIGERELMEKNLLAAKSRIDELKAKVNSAVCNSEKALSLLKKTRLTV 245
           +   K ME  +  L+ E++L++KNL+ A+  IDE  AK  SA  N+++ LS++K T   V
Sbjct: 484 MERNKAMENNLEVLVKEKDLVQKNLVEAQRGIDESMAKTESAGINTKRVLSMVKNTAAWV 543

Query: 246 CDGYGKRE-VEEVSSDEHKVGKEMQPFVEHLDAIKTSFTNKEKAVEEMTRVLE 298
           C      +  +EV  +E  + +E+Q +V  LDAIK++F NKEK VEEM + LE
Sbjct: 544 CQSQDHMDGKKEVVINEKNIEEEIQAYVVELDAIKSAFRNKEKTVEEMRKQLE 595

HSP 2 Score: 60.5 bits (145), Expect = 8.5e-06
Identity = 57/175 (32.57%), Postives = 92/175 (52.57%), Query Frame = 0


Query: 1   MAKKKPIRSAKE-LKQTPNNQE-ETSDSEQPKSAMDDDSKLQSLKSLNERLLKEMVEKRV 60
           MAKKK    AK+ +++ P +Q+   S + Q K   D   KLQSLKSLN  LLKE  E+R 
Sbjct: 1   MAKKKVAPQAKDHVEEAPQSQDGSQSHNNQAKPMHDLAEKLQSLKSLNSLLLKETSERRQ 60

Query: 61  EVGDLVQSKEALELDLKRNVNEKEQVMGELSEARDGVYGLELERNVVCVYLQSRIQEMGG 120
           +V  L Q+KE L+++L R+  E                     R+V+CV+++++I E+G 
Sbjct: 61  QVESLEQAKETLQVELARSGEEMXXXXXXXXXXXXXXXXXXXXRSVICVFMETQIGELGA 120

Query: 121 GICGLLESRLRDTLDEVSFERDDARKRFGDEKEKVEKLSLLLKDKERRIEEAIKE 174
           G  GL+  R +  ++E+  ER+      G  K++V +L   L+++   +     E
Sbjct: 121 GFDGLV--REKAEIEEMKRERE---AEIGFLKKEVNELIANLENERNGLSRLCLE 170

[Close]

BLAST of CsGy2G003610 vs. TrEMBL
Match: tr|A0A2P5DI48|A0A2P5DI48_PARAD (DNA repair protein XRCC4, C-terminal OS=Parasponia andersonii OX=3476 GN=PanWU01x14_060830 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 5.5e-21
Identity = 83/248 (33.47%), Postives = 146/248 (58.87%), Query Frame = 0


Query: 52  EMVEKRVEVGDLVQSKEALELDLKRNVNEKEQVM---GELSEARDGVYGLELERNVVCVY 111
           E+ +K + + +LV++K  +E   + NV ++ +++    E+ E RD ++ L       C  
Sbjct: 367 EINDKEIRIEELVRTKNEIE---EVNVGQESEILKLHNEVGELRDALFALRTS----CRD 426

Query: 112 LQSRIQEMGGGICGLLESRLRDTLDEVSFERDDARKRFGDEKEKVEKLSLLLKDKERRIE 171
            + + +++   +     S   D LD  + ++++A++ F +E++ VE L L++ + ERRIE
Sbjct: 427 EEEKNKQLLSEV-----SNHNDALDRATLQKEEAQRGFDEERKNVENLKLVISEGERRIE 486

Query: 172 EAIKEVEKAKIAQEEESLNVKKEMERRINALIGERELMEKNLLAAKSRIDELKAKVNSAV 231
           E IKE +  +  + E+ L+  K  E R+ +L+ ER+  +K+LL  +SR++E KAKV SA 
Sbjct: 487 EIIKESQILR-GEHEKLLDKTKATESRLESLVKERDTAQKSLLEVQSRMEEWKAKVESAG 546

Query: 232 CNSEKALSLLKKTRLTVCD-----GYGKREVEEVSSDEHKVGKEMQPFVEHLDAIKTSFT 291
            NS++AL++LKKT   V         GK+   EV   E K+ +E+QP+V  L+AI T+F 
Sbjct: 547 INSQRALAMLKKTAAMVSSQSEQCADGKK---EVLIHERKLEEEVQPYVAELEAIHTAFK 598

[Close]

BLAST of CsGy2G003610 vs. TrEMBL
Match: tr|A0A2P5EJ28|A0A2P5EJ28_9ROSA (Paramyosin-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_186950 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 7.9e-20
Identity = 80/246 (32.52%), Postives = 143/246 (58.13%), Query Frame = 0


Query: 52  EMVEKRVEVGDLVQSKEALELDLKRNVNEKEQVM---GELSEARDGVYGLELERNVVCVY 111
           E+ +K + + +LV++K  +E     NV ++ ++     E+ E RD ++ L       C  
Sbjct: 368 EINDKELRIEELVRTKNEIE---GVNVGQESEIFKLHNEVGELRDALFALRTS----CRD 427

Query: 112 LQSRIQEMGGGICGLLESRLRDTLDEVSFERDDARKRFGDEKEKVEKLSLLLKDKERRIE 171
            + + +++   +     S  +D LD  + ++++A+  F +E++KVE L L++ + ERRIE
Sbjct: 428 EEEKNKQLLSEV-----SNHKDALDRATLQKEEAQSGFDEERKKVENLKLVISEGERRIE 487

Query: 172 EAIKEVEKAKIAQEEESLNVKKEMERRINALIGERELMEKNLLAAKSRIDELKAKVNSAV 231
           E IKE +  +  + E+ L+  K  E  + +L+ ER+  +K+LL  +SR++E KAKV  A 
Sbjct: 488 EIIKESQILR-GEHEKLLDKTKATESGLESLVKERDTAQKSLLEVQSRMEEWKAKVELAG 547

Query: 232 CNSEKALSLLKKTRLTVCDGYGKREVE---EVSSDEHKVGKEMQPFVEHLDAIKTSFTNK 291
            NS++AL++LKKT   V     ++  +   EV   E K+ +E+QP+V  L+AI T+F +K
Sbjct: 548 INSQRALAMLKKTAAMVSSSQSEQCADGKKEVLIHERKLEEEVQPYVAELEAIHTAFKSK 600

The following BLAST results are available for this feature:

BLAST of CsGy2G003610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455286.1	7.5e-107	49.11	PREDICTED: cingulin [Cucumis melo]	[more]
KGN60859.1	2.6e-99	55.62	hypothetical protein Csa_2G015350 [Cucumis sativus]	[more]
XP_011648795.1	9.3e-89	48.20	PREDICTED: desmoplakin [Cucumis sativus]	[more]
XP_022150832.1	8.2e-45	31.25	myosin-2 heavy chain, non muscle-like [Momordica charantia]	[more]
XP_022938144.1	2.2e-42	36.44	polyamine-modulated factor 1-binding protein 1 [Cucurbita moschata]	[more]

BLAST of CsGy2G003610 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G27330.1	2.2e-07	27.59	Prefoldin chaperone subunit family protein	[more]

BLAST of CsGy2G003610 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy2G003610 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C0Q0\|A0A1S3C0Q0_CUCME	5.0e-107	49.11	cingulin OS=Cucumis melo OX=3656 GN=LOC103495485 PE=4 SV=1	[more]
tr\|A0A0A0LII4\|A0A0A0LII4_CUCSA	1.7e-99	55.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G015350 PE=4 SV=1	[more]
tr\|A0A2I4E931\|A0A2I4E931_9ROSI	2.5e-21	39.88	paramyosin-like OS=Juglans regia OX=51240 GN=LOC108987447 PE=4 SV=1	[more]
tr\|A0A2P5DI48\|A0A2P5DI48_PARAD	5.5e-21	33.47	DNA repair protein XRCC4, C-terminal OS=Parasponia andersonii OX=3476 GN=PanWU01...	[more]
tr\|A0A2P5EJ28\|A0A2P5EJ28_9ROSA	7.9e-20	32.52	Paramyosin-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_186950 PE=4 S...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G003610.1	CsGy2G003610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 153..223
None	No IPR available	COILS	Coil	Coil	coord: 39..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G003610	Cla019851	Watermelon (97103) v1	cgybwmB140
CsGy2G003610	Csa2G015350	Cucumber (Chinese Long) v2	cgybcuB056
CsGy2G003610	MELO3C004316	Melon (DHL92) v3.5.1	cgybmeB120
CsGy2G003610	ClCG02G016160	Watermelon (Charleston Gray)	cgybwcgB119
CsGy2G003610	CSPI02G03500	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G003610	CmoCh05G011880	Cucurbita moschata (Rifu)	cgybcmoB243
CsGy2G003610	Lsi11G005000	Bottle gourd (USVL1VR-Ls)	cgyblsiB089
CsGy2G003610	MELO3C004316.2	Melon (DHL92) v3.6.1	cgybmedB118
CsGy2G003610	CsaV3_2G004820	Cucumber (Chinese Long) v3	cgybcucB064
CsGy2G003610	Cla97C02G041990	Watermelon (97103) v2	cgybwmbB114
CsGy2G003610	Bhi06G001469	Wax gourd	cgybwgoB133

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G003610	Cucurbita pepo (Zucchini)	cgybcpeB168
CsGy2G003610	Cucurbita maxima (Rimu)	cgybcmaB178
CsGy2G003610	Cucurbita maxima (Rimu)	cgybcmaB257
CsGy2G003610	Cucurbita moschata (Rifu)	cgybcmoB170
CsGy2G003610	Cucurbita pepo (Zucchini)	cgybcpeB271
CsGy2G003610	Silver-seed gourd	carcgybB0310
CsGy2G003610	Silver-seed gourd	carcgybB0713