CsGy2G002730 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G002730
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	probable prolyl 4-hydroxylase 3
Location	Chr2 : 1803651 .. 1804448 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTAGGACTCGTGTGATCCTTGCACAAGGGCGGCCACCACCAAGTCAGGACTTTGTAGGGGCAAATGACAGGTCATGAGGTGCAAAATGAAAAATGATCAATACAAATGCAGGTCGGATATTGAATATTGAAGAAGGGGGCGAGACGGTGTTCCCGGCTGCGAACAAATGCGTCAGCTCTGTGCCATGGTGGAAGAAATTGCCTACACATGGTAAAGATGGACTCTCTATAAAACCAAAGATGGGAGATGCATTATTTTTCTGGAGCATGAAACCTGATGGTACATTGGATTATACGAGTTTGCATGGTTAGTGATATGTTTACAACACCAAAATCTTACATATTTTAACCATGTTAAAAGAGTTTTACAATGATTTTGTTTCTATTCTCAAATATTGTTTTTGTTAACTATTTATTTGCGAGTGTCCATTACATACTTCCAATATGTTGTCTGATATATGTATAGGTTCCTACCCCGTTATAAGAGGGGACGAATGGGCATGTGTAAAGCTCATGGATGATTAGAACACAAAACTTAACTGAGGTAAGTTATACAATTCTTTAGATCATCTATACTTTTCCAAATTGGTCCAATTTTAAATTTCCTTTTCTATCTGTACCAATATAATTCTCATCTAGAACCTCAATATATTAAGTTAAAGAAGGTGCATGGATATATTTCCAGAACTTAAATCATGCAATAAATATTTAAAATAAAAATATAGTACTAAAAGGTAAGGAATATACATTATGTTTTTTGTTTCCGAGTTTATAGATAATAGGTCAATTTTGTAA

mRNA sequence

ATGCGTAGGACTCGTGTGATCCTTGCACAAGGGCGGCCACCACCAAGTCGGATATTGAATATTGAAGAAGGGGGCGAGACGGTGTTCCCGGCTGCGAACAAATGCGTCAGCTCTGTGCCATGGTGGAAGAAATTGCCTACACATGGTAAAGATGGACTCTCTATAAAACCAAAGATGGGAGATGCATTATTTTTCTGGAGCATGAAACCTGATGGTACATTGGATTATACGAATAATAGGTCAATTTTGTAA

Coding sequence (CDS)

ATGCGTAGGACTCGTGTGATCCTTGCACAAGGGCGGCCACCACCAAGTCGGATATTGAATATTGAAGAAGGGGGCGAGACGGTGTTCCCGGCTGCGAACAAATGCGTCAGCTCTGTGCCATGGTGGAAGAAATTGCCTACACATGGTAAAGATGGACTCTCTATAAAACCAAAGATGGGAGATGCATTATTTTTCTGGAGCATGAAACCTGATGGTACATTGGATTATACGAATAATAGGTCAATTTTGTAA

Protein sequence

MRRTRVILAQGRPPPSRILNIEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLDYTNNRSIL

Homology

[Close]

BLAST of CsGy2G002730 vs. NCBI nr
Match: XP_024628113.1 (probable prolyl 4-hydroxylase 10 isoform X2 [Medicago truncatula])

HSP 1 Score: 100.1 bits (248), Expect = 3.6e-18
Identity = 44/64 (68.75%), Postives = 51/64 (79.69%), Query Frame = 0


Query: 20  NIEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLDYTNN 79
           ++EEGGETVFPAA   +SSVPWW +L   GK GLSIKPKMGDAL FWSMKPDGTLD ++ 
Sbjct: 194 DVEEGGETVFPAAKGNISSVPWWNELSDCGKKGLSIKPKMGDALLFWSMKPDGTLDPSSL 253

Query: 80  RSIL 84
             +L
Sbjct: 254 HGVL 257

[Close]

BLAST of CsGy2G002730 vs. NCBI nr
Match: XP_003629229.1 (probable prolyl 4-hydroxylase 10 isoform X1 [Medicago truncatula] >XP_024628110.1 probable prolyl 4-hydroxylase 10 isoform X1 [Medicago truncatula] >XP_024628111.1 probable prolyl 4-hydroxylase 10 isoform X1 [Medicago truncatula] >AET03705.1 prolyl 4-hydroxylase alpha-like protein [Medicago truncatula])

HSP 1 Score: 98.2 bits (243), Expect = 1.4e-17
Identity = 43/56 (76.79%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 20  NIEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLD 76
           ++EEGGETVFPAA   +SSVPWW +L   GK GLSIKPKMGDAL FWSMKPDGTLD
Sbjct: 194 DVEEGGETVFPAAKGNISSVPWWNELSDCGKKGLSIKPKMGDALLFWSMKPDGTLD 249

[Close]

BLAST of CsGy2G002730 vs. NCBI nr
Match: XP_023875747.1 (probable prolyl 4-hydroxylase 3 [Quercus suber] >XP_023875748.1 probable prolyl 4-hydroxylase 3 [Quercus suber] >XP_023892474.1 probable prolyl 4-hydroxylase 3 [Quercus suber] >XP_023892475.1 probable prolyl 4-hydroxylase 3 [Quercus suber] >POE60786.1 putative prolyl 4-hydroxylase 3 [Quercus suber] >POE81994.1 putative prolyl 4-hydroxylase 3 [Quercus suber])

HSP 1 Score: 96.7 bits (239), Expect = 4.0e-17
Identity = 41/56 (73.21%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 20  NIEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLD 76
           ++EEGGETVFPAAN+  SSVPWW +L   GK GLS+KPKMGDAL FWSM+PD TLD
Sbjct: 203 DVEEGGETVFPAANQNFSSVPWWNELSECGKQGLSVKPKMGDALLFWSMRPDATLD 258

[Close]

BLAST of CsGy2G002730 vs. NCBI nr
Match: GAU34238.1 (hypothetical protein TSUD_210200 [Trifolium subterraneum])

HSP 1 Score: 96.3 bits (238), Expect = 5.3e-17
Identity = 42/56 (75.00%), Postives = 46/56 (82.14%), Query Frame = 0


Query: 20  NIEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLD 76
           ++EEGGETVFPAA    SSVPWW +L   GK GLSIKPKMGDAL FWSMKPDGT+D
Sbjct: 96  DVEEGGETVFPAAKGNYSSVPWWNELSNCGKKGLSIKPKMGDALLFWSMKPDGTMD 151

[Close]

BLAST of CsGy2G002730 vs. NCBI nr
Match: PNX81458.1 (prolyl 4-hydroxylase subunit alpha-1-like protein, partial [Trifolium pratense])

HSP 1 Score: 96.3 bits (238), Expect = 5.3e-17
Identity = 43/55 (78.18%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 21  IEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLD 76
           +EEGGETVFPAA    SSVPWW +L   GK GLSIKPKMGDAL FWSMKPDGTLD
Sbjct: 112 VEEGGETVFPAAKGNFSSVPWWNELSDCGKKGLSIKPKMGDALLFWSMKPDGTLD 166

[Close]

BLAST of CsGy2G002730 vs. TAIR10
Match: AT1G20270.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein)

HSP 1 Score: 92.4 bits (228), Expect = 1.4e-19
Identity = 40/59 (67.80%), Postives = 48/59 (81.36%), Query Frame = 0


Query: 20  NIEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLDYTN 79
           ++EEGGETVFPAAN   SSVPW+ +L   GK GLS+KP+MGDAL FWSM+PD TLD T+
Sbjct: 203 DVEEGGETVFPAANMNFSSVPWYNELSECGKKGLSVKPRMGDALLFWSMRPDATLDPTS 261

[Close]

BLAST of CsGy2G002730 vs. TAIR10
Match: AT5G66060.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein)

HSP 1 Score: 90.5 bits (223), Expect = 5.2e-19
Identity = 39/56 (69.64%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 20  NIEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLD 76
           ++EEGGETVFPAA    S+VPWW +L   GK GLS+KPKMGDAL FWSM PD TLD
Sbjct: 205 DVEEGGETVFPAAKGNYSAVPWWNELSECGKGGLSVKPKMGDALLFWSMTPDATLD 260

[Close]

BLAST of CsGy2G002730 vs. TAIR10
Match: AT4G35810.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein)

HSP 1 Score: 84.3 bits (207), Expect = 3.8e-17
Identity = 36/56 (64.29%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 20  NIEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLD 76
           +++EGGETVFPAA   VS VPWW +L   GK+GLS+ PK  DAL FWSMKPD +LD
Sbjct: 207 DVDEGGETVFPAAKGNVSDVPWWDELSQCGKEGLSVLPKKRDALLFWSMKPDASLD 262

[Close]

BLAST of CsGy2G002730 vs. TAIR10
Match: AT2G17720.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein)

HSP 1 Score: 81.3 bits (199), Expect = 3.2e-16
Identity = 32/56 (57.14%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 20  NIEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLD 76
           ++++GGETVFPAA   +S+VPWW +L   GK+GLS+ PK  DAL FW+M+PD +LD
Sbjct: 207 DVDDGGETVFPAARGNISAVPWWNELSKCGKEGLSVLPKKRDALLFWNMRPDASLD 262

[Close]

BLAST of CsGy2G002730 vs. TAIR10
Match: AT4G35820.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 8.4e-09
Identity = 26/56 (46.43%), Postives = 35/56 (62.50%), Query Frame = 0


Query: 20  NIEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLD 76
           ++++GGETVFP A    S            K G+S++PK GDAL FWSM+PDG+ D
Sbjct: 213 DVDKGGETVFPEAKGIKS------------KKGVSVRPKKGDALLFWSMRPDGSRD 256

[Close]

BLAST of CsGy2G002730 vs. Swiss-Prot
Match: sp|Q9LN20|P4H3_ARATH (Probable prolyl 4-hydroxylase 3 OS=Arabidopsis thaliana OX=3702 GN=P4H3 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.5e-18
Identity = 40/59 (67.80%), Postives = 48/59 (81.36%), Query Frame = 0


Query: 20  NIEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLDYTN 79
           ++EEGGETVFPAAN   SSVPW+ +L   GK GLS+KP+MGDAL FWSM+PD TLD T+
Sbjct: 203 DVEEGGETVFPAANMNFSSVPWYNELSECGKKGLSVKPRMGDALLFWSMRPDATLDPTS 261

[Close]

BLAST of CsGy2G002730 vs. Swiss-Prot
Match: sp|F4JZ24|P4H10_ARATH (Probable prolyl 4-hydroxylase 10 OS=Arabidopsis thaliana OX=3702 GN=P4H10 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 9.4e-18
Identity = 39/56 (69.64%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 20  NIEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLD 76
           ++EEGGETVFPAA    S+VPWW +L   GK GLS+KPKMGDAL FWSM PD TLD
Sbjct: 205 DVEEGGETVFPAAKGNYSAVPWWNELSECGKGGLSVKPKMGDALLFWSMTPDATLD 260

[Close]

BLAST of CsGy2G002730 vs. Swiss-Prot
Match: sp|F4JNU8|P4H8_ARATH (Probable prolyl 4-hydroxylase 8 OS=Arabidopsis thaliana OX=3702 GN=P4H8 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 6.8e-16
Identity = 36/56 (64.29%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 20  NIEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLD 76
           +++EGGETVFPAA   VS VPWW +L   GK+GLS+ PK  DAL FWSMKPD +LD
Sbjct: 207 DVDEGGETVFPAAKGNVSDVPWWDELSQCGKEGLSVLPKKRDALLFWSMKPDASLD 262

[Close]

BLAST of CsGy2G002730 vs. Swiss-Prot
Match: sp|Q24JN5|P4H5_ARATH (Prolyl 4-hydroxylase 5 OS=Arabidopsis thaliana OX=3702 GN=P4H5 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 5.7e-15
Identity = 32/56 (57.14%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 20  NIEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLD 76
           ++++GGETVFPAA   +S+VPWW +L   GK+GLS+ PK  DAL FW+M+PD +LD
Sbjct: 207 DVDDGGETVFPAARGNISAVPWWNELSKCGKEGLSVLPKKRDALLFWNMRPDASLD 262

[Close]

BLAST of CsGy2G002730 vs. Swiss-Prot
Match: sp|Q9SZT0|P4H11_ARATH (Probable prolyl 4-hydroxylase 11 OS=Arabidopsis thaliana OX=3702 GN=P4H11 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.5e-07
Identity = 26/56 (46.43%), Postives = 35/56 (62.50%), Query Frame = 0


Query: 20  NIEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLD 76
           ++++GGETVFP A    S            K G+S++PK GDAL FWSM+PDG+ D
Sbjct: 213 DVDKGGETVFPEAKGIKS------------KKGVSVRPKKGDALLFWSMRPDGSRD 256

[Close]

BLAST of CsGy2G002730 vs. TrEMBL
Match: tr|G7LB32|G7LB32_MEDTR (Prolyl 4-hydroxylase alpha-like protein OS=Medicago truncatula OX=3880 GN=11441546 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 9.2e-18
Identity = 43/56 (76.79%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 20  NIEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLD 76
           ++EEGGETVFPAA   +SSVPWW +L   GK GLSIKPKMGDAL FWSMKPDGTLD
Sbjct: 194 DVEEGGETVFPAAKGNISSVPWWNELSDCGKKGLSIKPKMGDALLFWSMKPDGTLD 249

[Close]

BLAST of CsGy2G002730 vs. TrEMBL
Match: tr|A0A2P4HWZ5|A0A2P4HWZ5_QUESU (Putative prolyl 4-hydroxylase 3 OS=Quercus suber OX=58331 GN=CFP56_44144 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.7e-17
Identity = 41/56 (73.21%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 20  NIEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLD 76
           ++EEGGETVFPAAN+  SSVPWW +L   GK GLS+KPKMGDAL FWSM+PD TLD
Sbjct: 203 DVEEGGETVFPAANQNFSSVPWWNELSECGKQGLSVKPKMGDALLFWSMRPDATLD 258

[Close]

BLAST of CsGy2G002730 vs. TrEMBL
Match: tr|A0A2K3LSD5|A0A2K3LSD5_TRIPR (Prolyl 4-hydroxylase subunit alpha-1-like protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g037477 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.5e-17
Identity = 43/55 (78.18%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 21  IEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLD 76
           +EEGGETVFPAA    SSVPWW +L   GK GLSIKPKMGDAL FWSMKPDGTLD
Sbjct: 112 VEEGGETVFPAAKGNFSSVPWWNELSDCGKKGLSIKPKMGDALLFWSMKPDGTLD 166

[Close]

BLAST of CsGy2G002730 vs. TrEMBL
Match: tr|A0A2N9FLU9|A0A2N9FLU9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15952 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.5e-17
Identity = 41/56 (73.21%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 20  NIEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLD 76
           ++EEGGETVFPAAN+  SSVPWW +L   GK GLS+KPKMGDAL FWSM+PD TLD
Sbjct: 203 DVEEGGETVFPAANQNFSSVPWWDELSECGKGGLSVKPKMGDALLFWSMRPDATLD 258

[Close]

BLAST of CsGy2G002730 vs. TrEMBL
Match: tr|A0A2N9GL65|A0A2N9GL65_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31079 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.5e-17
Identity = 41/56 (73.21%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 20  NIEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLD 76
           ++EEGGETVFPAAN+  SSVPWW +L   GK GLS+KPKMGDAL FWSM+PD TLD
Sbjct: 112 DVEEGGETVFPAANQNFSSVPWWDELSECGKGGLSVKPKMGDALLFWSMRPDATLD 167

The following BLAST results are available for this feature:

BLAST of CsGy2G002730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_024628113.1	3.6e-18	68.75	probable prolyl 4-hydroxylase 10 isoform X2 [Medicago truncatula]	[more]
XP_003629229.1	1.4e-17	76.79	probable prolyl 4-hydroxylase 10 isoform X1 [Medicago truncatula] >XP_024628110....	[more]
XP_023875747.1	4.0e-17	73.21	probable prolyl 4-hydroxylase 3 [Quercus suber] >XP_023875748.1 probable prolyl ...	[more]
GAU34238.1	5.3e-17	75.00	hypothetical protein TSUD_210200 [Trifolium subterraneum]	[more]
PNX81458.1	5.3e-17	78.18	prolyl 4-hydroxylase subunit alpha-1-like protein, partial [Trifolium pratense]	[more]

BLAST of CsGy2G002730 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G20270.1	1.4e-19	67.80	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT5G66060.1	5.2e-19	69.64	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT4G35810.1	3.8e-17	64.29	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT2G17720.1	3.2e-16	57.14	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT4G35820.1	8.4e-09	46.43	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]

BLAST of CsGy2G002730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LN20\|P4H3_ARATH	2.5e-18	67.80	Probable prolyl 4-hydroxylase 3 OS=Arabidopsis thaliana OX=3702 GN=P4H3 PE=2 SV=...	[more]
sp\|F4JZ24\|P4H10_ARATH	9.4e-18	69.64	Probable prolyl 4-hydroxylase 10 OS=Arabidopsis thaliana OX=3702 GN=P4H10 PE=3 S...	[more]
sp\|F4JNU8\|P4H8_ARATH	6.8e-16	64.29	Probable prolyl 4-hydroxylase 8 OS=Arabidopsis thaliana OX=3702 GN=P4H8 PE=3 SV=...	[more]
sp\|Q24JN5\|P4H5_ARATH	5.7e-15	57.14	Prolyl 4-hydroxylase 5 OS=Arabidopsis thaliana OX=3702 GN=P4H5 PE=2 SV=1	[more]
sp\|Q9SZT0\|P4H11_ARATH	1.5e-07	46.43	Probable prolyl 4-hydroxylase 11 OS=Arabidopsis thaliana OX=3702 GN=P4H11 PE=3 S...	[more]

BLAST of CsGy2G002730 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|G7LB32\|G7LB32_MEDTR	9.2e-18	76.79	Prolyl 4-hydroxylase alpha-like protein OS=Medicago truncatula OX=3880 GN=114415...	[more]
tr\|A0A2P4HWZ5\|A0A2P4HWZ5_QUESU	2.7e-17	73.21	Putative prolyl 4-hydroxylase 3 OS=Quercus suber OX=58331 GN=CFP56_44144 PE=4 SV...	[more]
tr\|A0A2K3LSD5\|A0A2K3LSD5_TRIPR	3.5e-17	78.18	Prolyl 4-hydroxylase subunit alpha-1-like protein (Fragment) OS=Trifolium praten...	[more]
tr\|A0A2N9FLU9\|A0A2N9FLU9_FAGSY	4.5e-17	73.21	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15952 PE=4 SV=1	[more]
tr\|A0A2N9GL65\|A0A2N9GL65_FAGSY	4.5e-17	73.21	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31079 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0051213	dioxygenase activity
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0031418	L-ascorbic acid binding
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G002730.1	CsGy2G002730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:2.60.120.620		coord: 18..80 e-value: 8.7E-11 score: 44.0
None	No IPR available	PANTHER	PTHR10869	PROLYL 4-HYDROXYLASE ALPHA SUBUNIT	coord: 20..77
None	No IPR available	PANTHER	PTHR10869:SF100	PROLYL 4-HYDROXYLASE 5-RELATED	coord: 20..77

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G002730	MELO3C004414.2	Melon (DHL92) v3.6.1	cgybmedB118
CsGy2G002730	CsaV3_2G003800	Cucumber (Chinese Long) v3	cgybcucB064
CsGy2G002730	Cla97C02G042670	Watermelon (97103) v2	cgybwmbB114
CsGy2G002730	Bhi06G001560	Wax gourd	cgybwgoB130

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G002730	Cucurbita pepo (Zucchini)	cgybcpeB168
CsGy2G002730	Cucurbita maxima (Rimu)	cgybcmaB178
CsGy2G002730	Cucurbita maxima (Rimu)	cgybcmaB228
CsGy2G002730	Cucurbita maxima (Rimu)	cgybcmaB257
CsGy2G002730	Cucurbita moschata (Rifu)	cgybcmoB170
CsGy2G002730	Cucurbita moschata (Rifu)	cgybcmoB243
CsGy2G002730	Cucurbita pepo (Zucchini)	cgybcpeB271
CsGy2G002730	Cucumber (Chinese Long) v2	cgybcuB056
CsGy2G002730	Bottle gourd (USVL1VR-Ls)	cgyblsiB089
CsGy2G002730	Melon (DHL92) v3.5.1	cgybmeB120
CsGy2G002730	Watermelon (Charleston Gray)	cgybwcgB119
CsGy2G002730	Watermelon (97103) v1	cgybwmB140
CsGy2G002730	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G002730	Silver-seed gourd	carcgybB0269
CsGy2G002730	Silver-seed gourd	carcgybB1053
CsGy2G002730	Wax gourd	cgybwgoB133