CsGy2G002590 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G002590
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	transcription factor bHLH66
Location	Chr2 : 1717585 .. 1718023 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCTTAATTCCGTTATAACATGGGTTTAATTATTATATTATATATTCAATTAACATCCTCTTGTCTAATTAGGGTGGCACTGAGTGCAACCAGTCCAACGGAACTAATGGGGCCAGTGGGCAGACTTCCACCGGAGCTCCGTCGAGTAATGACGCGATGACGGTGACGGAGCACCAGGTTGTGAAGTTAATGGAGGAGGACATGGGCTCCGCCATGCAGTACTTACAAGGCAAAGGCCTCTGCCTCATGCCCATTTCTCTCGCCACCGCTATCTCCACCGCTACATGTCACAGCCGCCCAATCACGGCGTCCAAGGGCGGAGGAGATCCCCCCACCTCTCCCAGCCTTTCGGCGTTGACCGTCCAGTCAACTGCCTTGGGTAACGGCACCGTCGACAAACCCGTCAGAGACACCCTCTCCGTTTCCCGGCCGTGA

mRNA sequence

ATGCAGCTTAATTCCGTTATAACATGGGGTGGCACTGAGTGCAACCAGTCCAACGGAACTAATGGGGCCAGTGGGCAGACTTCCACCGGAGCTCCGTCGAGTAATGACGCGATGACGGTGACGGAGCACCAGGTTGTGAAGTTAATGGAGGAGGACATGGGCTCCGCCATGCAGTACTTACAAGGCAAAGGCCTCTGCCTCATGCCCATTTCTCTCGCCACCGCTATCTCCACCGCTACATGTCACAGCCGCCCAATCACGGCGTCCAAGGGCGGAGGAGATCCCCCCACCTCTCCCAGCCTTTCGGCGTTGACCGTCCAGTCAACTGCCTTGGGTAACGGCACCGTCGACAAACCCGTCAGAGACACCCTCTCCGTTTCCCGGCCGTGA

Coding sequence (CDS)

ATGCAGCTTAATTCCGTTATAACATGGGGTGGCACTGAGTGCAACCAGTCCAACGGAACTAATGGGGCCAGTGGGCAGACTTCCACCGGAGCTCCGTCGAGTAATGACGCGATGACGGTGACGGAGCACCAGGTTGTGAAGTTAATGGAGGAGGACATGGGCTCCGCCATGCAGTACTTACAAGGCAAAGGCCTCTGCCTCATGCCCATTTCTCTCGCCACCGCTATCTCCACCGCTACATGTCACAGCCGCCCAATCACGGCGTCCAAGGGCGGAGGAGATCCCCCCACCTCTCCCAGCCTTTCGGCGTTGACCGTCCAGTCAACTGCCTTGGGTAACGGCACCGTCGACAAACCCGTCAGAGACACCCTCTCCGTTTCCCGGCCGTGA

Protein sequence

MQLNSVITWGGTECNQSNGTNGASGQTSTGAPSSNDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRPITASKGGGDPPTSPSLSALTVQSTALGNGTVDKPVRDTLSVSRP

Homology

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BLAST of CsGy2G002590 vs. NCBI nr
Match: XP_004139396.1 (PREDICTED: transcription factor bHLH66-like [Cucumis sativus] >KGN60760.1 hypothetical protein Csa_2G009480 [Cucumis sativus])

HSP 1 Score: 232.3 bits (591), Expect = 9.5e-58
Identity = 122/128 (95.31%), Postives = 124/128 (96.88%), Query Frame = 0


Query: 2   QLNSVITWGGTECNQSNGTNGASGQTSTGAPSSNDAMTVTEHQVVKLMEEDMGSAMQYLQ 61
           +L  + T GGTECNQSNGTNGASGQTSTGAPSSNDAMTVTEHQVVKLMEEDMGSAMQYLQ
Sbjct: 294 RLPDLSTEGGTECNQSNGTNGASGQTSTGAPSSNDAMTVTEHQVVKLMEEDMGSAMQYLQ 353

Query: 62  GKGLCLMPISLATAISTATCHSRPITASKGGGDPPTSPSLSALTVQSTALGNGTVDKPVR 121
           GKGLCLMPISLATAISTATCHSRPITASKGGGDPPTSPSLSALTVQSTALGNGTVDKPVR
Sbjct: 354 GKGLCLMPISLATAISTATCHSRPITASKGGGDPPTSPSLSALTVQSTALGNGTVDKPVR 413

Query: 122 DTLSVSRP 130
           DTLSVSRP
Sbjct: 414 DTLSVSRP 421

[Close]

BLAST of CsGy2G002590 vs. NCBI nr
Match: XP_023545593.1 (transcription factor bHLH66-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 192.6 bits (488), Expect = 8.4e-46
Identity = 101/122 (82.79%), Postives = 107/122 (87.70%), Query Frame = 0


Query: 8   TWGGTECNQSNGTNGASGQTSTGAPSSNDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLCL 67
           T GGT+CN SN T GA GQTSTG P+SND M +TE+QVVKLMEEDMGSAMQYLQGKGLCL
Sbjct: 297 TQGGTDCNLSNETGGAVGQTSTGGPTSNDTMAITENQVVKLMEEDMGSAMQYLQGKGLCL 356

Query: 68  MPISLATAISTATCHSRPITASKGGGDPPTSPSLSALTVQSTALGNGTVDKPVRDTLSVS 127
           MPISLATAIS ATCHSRPIT SKGGGD PTSPSLSALT QST LGNGTVD+ VRD+ SVS
Sbjct: 357 MPISLATAISAATCHSRPITTSKGGGDAPTSPSLSALTSQSTVLGNGTVDRAVRDSASVS 416

Query: 128 RP 130
           RP
Sbjct: 417 RP 418

[Close]

BLAST of CsGy2G002590 vs. NCBI nr
Match: XP_022143019.1 (transcription factor bHLH66-like [Momordica charantia])

HSP 1 Score: 186.4 bits (472), Expect = 6.0e-44
Identity = 97/121 (80.17%), Postives = 108/121 (89.26%), Query Frame = 0


Query: 10  GGTECNQSNGTNGASGQTSTGAPSSNDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLCLMP 69
           GGT+CN SNG  GA+G+TS GAPS+NDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLCLMP
Sbjct: 321 GGTDCNLSNGAGGAAGRTSAGAPSTNDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLCLMP 380

Query: 70  ISLATAISTATCHSRPITASK-GGGDPPTSPSLSALTVQSTALGNGTVDKPVRDTLSVSR 129
           ISLATAISTATCHSRPI ASK GGG+ PTSP +S+LTVQST LGNG +++ V+D  SVSR
Sbjct: 381 ISLATAISTATCHSRPIVASKGGGGEGPTSPGMSSLTVQSTTLGNGAINRAVKDAASVSR 440

[Close]

BLAST of CsGy2G002590 vs. NCBI nr
Match: XP_023538199.1 (transcription factor bHLH69-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.0 bits (463), Expect = 6.6e-43
Identity = 97/120 (80.83%), Postives = 105/120 (87.50%), Query Frame = 0


Query: 10  GGTECNQSNGTNGASGQTSTGAPSSNDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLCLMP 69
           GG +CNQSNG  GA+ Q   GAP+SND MTVTEHQVVKLME+DMGSAMQYLQGKGLCLMP
Sbjct: 304 GGMDCNQSNGNGGAARQAFAGAPASNDTMTVTEHQVVKLMEKDMGSAMQYLQGKGLCLMP 363

Query: 70  ISLATAISTATCHSRPITASKGGGDPPTSPSLSALTVQSTALGNGTVDKPVRDTLSVSRP 129
           ISLATAISTATCHSRP+TAS+GGGD PTSPSLSALTVQSTALGNGT    V+D  S+SRP
Sbjct: 364 ISLATAISTATCHSRPVTASRGGGDRPTSPSLSALTVQSTALGNGT----VKDKASISRP 419

[Close]

BLAST of CsGy2G002590 vs. NCBI nr
Match: XP_022937836.1 (transcription factor bHLH69-like [Cucurbita moschata])

HSP 1 Score: 179.5 bits (454), Expect = 7.3e-42
Identity = 96/115 (83.48%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 15  NQSNGTNGASGQTSTGAPSSNDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLCLMPISLAT 74
           NQSNGT GA+GQT  GAP+SND MTVTEHQVVKLME+DMGSAMQYLQGKGLCLMPISLAT
Sbjct: 308 NQSNGTGGAAGQTFAGAPASNDTMTVTEHQVVKLMEKDMGSAMQYLQGKGLCLMPISLAT 367

Query: 75  AISTATCHSRPITASKGGGDPPTSPSLSALTVQSTALGNGTVDKPVRDTLSVSRP 130
           AISTATCHSRP+TAS+GGGD PTSPSLSALTVQSTAL NGT    V+D  S+SRP
Sbjct: 368 AISTATCHSRPVTASRGGGDRPTSPSLSALTVQSTALRNGT----VKDKASISRP 418

[Close]

BLAST of CsGy2G002590 vs. TAIR10
Match: AT2G24260.1 (LJRHL1-like 1)

HSP 1 Score: 109.4 bits (272), Expect = 1.7e-24
Identity = 74/137 (54.01%), Postives = 92/137 (67.15%), Query Frame = 0


Query: 10  GGTECNQSNGTNGASGQTSTGAPSSNDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLCLMP 69
           GG+  N S+   G S QT   A +SND++T+TEHQV KLMEEDMGSAMQYLQGKGLCLMP
Sbjct: 219 GGSHGNASSAMVGGS-QT---AGNSNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMP 278

Query: 70  ISLATAISTATCHSR----PITASKGGGDPPTSPSLSALTVQSTAL----------GNGT 129
           ISLATAISTATCHSR    P   +  GG  P+ P+LS +T+QST+           GNG 
Sbjct: 279 ISLATAISTATCHSRNPLIPGAVADVGG--PSPPNLSGMTIQSTSTKMGSGNGKLNGNGV 338

[Close]

BLAST of CsGy2G002590 vs. TAIR10
Match: AT4G30980.1 (LJRHL1-like 2)

HSP 1 Score: 94.4 bits (233), Expect = 5.6e-20
Identity = 67/118 (56.78%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 19  GTNGASGQTSTGA------PSSNDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLCLMPISL 78
           G   AS Q S  A       SS+    +TEHQV KLMEEDMGSAMQYLQGKGLCLMPISL
Sbjct: 199 GAASASSQISEDAGGSHENTSSSGEAKMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISL 258

Query: 79  ATAISTATCHSR-PITASKGGGDPPTSPSLSALTVQSTALGNGTVDKPVRDTLSVSRP 130
           AT ISTATC SR P     G    P SP+LS   V   A GNG+    V+D  SVS+P
Sbjct: 259 ATTISTATCPSRSPFVKDTG---VPLSPNLSTTIV---ANGNGSSLVTVKDAPSVSKP 310

[Close]

BLAST of CsGy2G002590 vs. TAIR10
Match: AT5G58010.1 (LJRHL1-like 3)

HSP 1 Score: 84.0 bits (206), Expect = 7.6e-17
Identity = 53/110 (48.18%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 14  CNQSNGTNGASGQTSTGAPSSNDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLCLMPISLA 73
           CN  NG   A+G       SSN+++  TE +V KLMEEDMGSAMQYLQGKGLCLMPISLA
Sbjct: 194 CNGLNGNGNATG-------SSNESLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLA 253

Query: 74  TAISTATCHSR-----PITASKGGGDPPTSPSLSALTVQSTALGNGTVDK 119
           TAIS++T HSR     PI+++    D   + +  A    S+ + + +  K
Sbjct: 254 TAISSSTTHSRGSLFNPISSAVAAEDSNVTATAVAAPEASSTMDDVSASK 296

[Close]

BLAST of CsGy2G002590 vs. TAIR10
Match: AT1G03040.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 54.3 bits (129), Expect = 6.5e-08
Identity = 35/66 (53.03%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 34  SNDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRPITASKGGG 93
           SND    TE QV KLMEE++G+AMQ LQ K LC+MPISLA AI     HS+P   S    
Sbjct: 242 SNDG---TERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAI----YHSQPPDTSSSIV 300

Query: 94  DPPTSP 100
            P  +P
Sbjct: 302 KPEMNP 300

[Close]

BLAST of CsGy2G002590 vs. TAIR10
Match: AT4G02590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 53.9 bits (128), Expect = 8.4e-08
Identity = 36/66 (54.55%), Postives = 42/66 (63.64%), Query Frame = 0


Query: 34  SNDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRPITAS---K 93
           SND    TE QV KLMEE++G+AMQ LQ K LC+MPISLA AI     HS+P   S   K
Sbjct: 251 SNDG---TERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAI----YHSQPPDTSSVVK 309

Query: 94  GGGDPP 97
              +PP
Sbjct: 311 PENNPP 309

[Close]

BLAST of CsGy2G002590 vs. Swiss-Prot
Match: sp|Q9ZUG9|BH066_ARATH (Transcription factor bHLH66 OS=Arabidopsis thaliana OX=3702 GN=BHLH66 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.1e-23
Identity = 74/137 (54.01%), Postives = 92/137 (67.15%), Query Frame = 0


Query: 10  GGTECNQSNGTNGASGQTSTGAPSSNDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLCLMP 69
           GG+  N S+   G S QT   A +SND++T+TEHQV KLMEEDMGSAMQYLQGKGLCLMP
Sbjct: 219 GGSHGNASSAMVGGS-QT---AGNSNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMP 278

Query: 70  ISLATAISTATCHSR----PITASKGGGDPPTSPSLSALTVQSTAL----------GNGT 129
           ISLATAISTATCHSR    P   +  GG  P+ P+LS +T+QST+           GNG 
Sbjct: 279 ISLATAISTATCHSRNPLIPGAVADVGG--PSPPNLSGMTIQSTSTKMGSGNGKLNGNGV 338

[Close]

BLAST of CsGy2G002590 vs. Swiss-Prot
Match: sp|Q8S3D5|BH069_ARATH (Transcription factor bHLH69 OS=Arabidopsis thaliana OX=3702 GN=BHLH69 PE=2 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 1.0e-18
Identity = 67/118 (56.78%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 19  GTNGASGQTSTGA------PSSNDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLCLMPISL 78
           G   AS Q S  A       SS+    +TEHQV KLMEEDMGSAMQYLQGKGLCLMPISL
Sbjct: 199 GAASASSQISEDAGGSHENTSSSGEAKMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISL 258

Query: 79  ATAISTATCHSR-PITASKGGGDPPTSPSLSALTVQSTALGNGTVDKPVRDTLSVSRP 130
           AT ISTATC SR P     G    P SP+LS   V   A GNG+    V+D  SVS+P
Sbjct: 259 ATTISTATCPSRSPFVKDTG---VPLSPNLSTTIV---ANGNGSSLVTVKDAPSVSKP 310

[Close]

BLAST of CsGy2G002590 vs. Swiss-Prot
Match: sp|Q9LSQ3|BH082_ARATH (Transcription factor bHLH82 OS=Arabidopsis thaliana OX=3702 GN=BHLH82 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-15
Identity = 53/110 (48.18%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 14  CNQSNGTNGASGQTSTGAPSSNDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLCLMPISLA 73
           CN  NG   A+G       SSN+++  TE +V KLMEEDMGSAMQYLQGKGLCLMPISLA
Sbjct: 194 CNGLNGNGNATG-------SSNESLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLA 253

Query: 74  TAISTATCHSR-----PITASKGGGDPPTSPSLSALTVQSTALGNGTVDK 119
           TAIS++T HSR     PI+++    D   + +  A    S+ + + +  K
Sbjct: 254 TAISSSTTHSRGSLFNPISSAVAAEDSNVTATAVAAPEASSTMDDVSASK 296

[Close]

BLAST of CsGy2G002590 vs. Swiss-Prot
Match: sp|Q93Y00|BH007_ARATH (Transcription factor bHLH7 OS=Arabidopsis thaliana OX=3702 GN=BHLH7 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06
Identity = 35/66 (53.03%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 34  SNDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRPITASKGGG 93
           SND    TE QV KLMEE++G+AMQ LQ K LC+MPISLA AI     HS+P   S    
Sbjct: 242 SNDG---TERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAI----YHSQPPDTSSSIV 300

Query: 94  DPPTSP 100
            P  +P
Sbjct: 302 KPEMNP 300

[Close]

BLAST of CsGy2G002590 vs. Swiss-Prot
Match: sp|O22768|UNE12_ARATH (Transcription factor UNE12 OS=Arabidopsis thaliana OX=3702 GN=UNE12 PE=2 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.5e-06
Identity = 36/66 (54.55%), Postives = 42/66 (63.64%), Query Frame = 0


Query: 34  SNDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRPITAS---K 93
           SND    TE QV KLMEE++G+AMQ LQ K LC+MPISLA AI     HS+P   S   K
Sbjct: 251 SNDG---TERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAI----YHSQPPDTSSVVK 309

Query: 94  GGGDPP 97
              +PP
Sbjct: 311 PENNPP 309

[Close]

BLAST of CsGy2G002590 vs. TrEMBL
Match: tr|A0A0A0LFE4|A0A0A0LFE4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009480 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 6.3e-58
Identity = 122/128 (95.31%), Postives = 124/128 (96.88%), Query Frame = 0


Query: 2   QLNSVITWGGTECNQSNGTNGASGQTSTGAPSSNDAMTVTEHQVVKLMEEDMGSAMQYLQ 61
           +L  + T GGTECNQSNGTNGASGQTSTGAPSSNDAMTVTEHQVVKLMEEDMGSAMQYLQ
Sbjct: 294 RLPDLSTEGGTECNQSNGTNGASGQTSTGAPSSNDAMTVTEHQVVKLMEEDMGSAMQYLQ 353

Query: 62  GKGLCLMPISLATAISTATCHSRPITASKGGGDPPTSPSLSALTVQSTALGNGTVDKPVR 121
           GKGLCLMPISLATAISTATCHSRPITASKGGGDPPTSPSLSALTVQSTALGNGTVDKPVR
Sbjct: 354 GKGLCLMPISLATAISTATCHSRPITASKGGGDPPTSPSLSALTVQSTALGNGTVDKPVR 413

Query: 122 DTLSVSRP 130
           DTLSVSRP
Sbjct: 414 DTLSVSRP 421

[Close]

BLAST of CsGy2G002590 vs. TrEMBL
Match: tr|A0A2P5C0J2|A0A2P5C0J2_PARAD (Basic helix-loop-helix transcription factor OS=Parasponia andersonii OX=3476 GN=PanBHLH23 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.4e-33
Identity = 87/128 (67.97%), Postives = 96/128 (75.00%), Query Frame = 0


Query: 10  GGTECNQSNGTNGASGQTSTG--APSSNDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLCL 69
           GG +C Q+N T GA G+TS G    SSND MTVTEHQV KLMEEDMGSAMQYLQGKGLCL
Sbjct: 343 GGGDCIQANTTGGALGRTSNGNQTASSNDTMTVTEHQVAKLMEEDMGSAMQYLQGKGLCL 402

Query: 70  MPISLATAISTATCHSR------PITASKGGGDPPTSPSLSALTVQSTALGNGTVDKPVR 129
           MPISLATAISTATCH+R      P  AS G G  P+SPS+S LTVQS  +GNG VD  V+
Sbjct: 403 MPISLATAISTATCHTRNPLINNPAMASNGEG--PSSPSMSVLTVQSATMGNGNVDGSVK 462

[Close]

BLAST of CsGy2G002590 vs. TrEMBL
Match: tr|A0A2P5F3C2|A0A2P5F3C2_9ROSA (Basic helix-loop-helix transcription factor OS=Trema orientalis OX=63057 GN=TorBHLH23 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.7e-32
Identity = 86/128 (67.19%), Postives = 95/128 (74.22%), Query Frame = 0


Query: 10  GGTECNQSNGTNGASGQTSTG--APSSNDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLCL 69
           GG +C Q+N T GA G+TS G    SSND MTVTEHQV KLMEEDMGSAMQYLQGKGLCL
Sbjct: 345 GGGDCIQANTTPGALGRTSNGNQTASSNDTMTVTEHQVAKLMEEDMGSAMQYLQGKGLCL 404

Query: 70  MPISLATAISTATCHSR------PITASKGGGDPPTSPSLSALTVQSTALGNGTVDKPVR 129
           MPISLATAISTATCH+R      P  AS G G  P+SPS+S LTVQS  +GNG  D  V+
Sbjct: 405 MPISLATAISTATCHTRNPLINNPAMASNGEG--PSSPSMSVLTVQSATMGNGNADGSVK 464

[Close]

BLAST of CsGy2G002590 vs. TrEMBL
Match: tr|B9SBX4|B9SBX4_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0700090 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.5e-30
Identity = 82/136 (60.29%), Postives = 97/136 (71.32%), Query Frame = 0


Query: 10  GGTECNQSNGTNGASG-------QTSTGAPSSNDAMTVTEHQVVKLMEEDMGSAMQYLQG 69
           GG +C Q+N  NGA+G         S+  PSSND++TVTEHQV KLMEEDMGSAMQYLQG
Sbjct: 340 GGGDCIQAN-ANGAAGNGSLPRANNSSQTPSSNDSLTVTEHQVAKLMEEDMGSAMQYLQG 399

Query: 70  KGLCLMPISLATAISTATCHSRPITAS---------KGGGDPPTSPSLSALTVQSTALGN 129
           KGLCLMPISLATAISTATCH+R  T +         +  G+ P+SPS+S LTVQS  LGN
Sbjct: 400 KGLCLMPISLATAISTATCHNRNTTTNSLLNPSRLLQSNGEGPSSPSMSVLTVQSATLGN 459

[Close]

BLAST of CsGy2G002590 vs. TrEMBL
Match: tr|F6HYI3|F6HYI3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0037g00040 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.6e-29
Identity = 80/143 (55.94%), Postives = 96/143 (67.13%), Query Frame = 0


Query: 10  GGTECNQSNGTNGASGQTSTG---APSSNDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLC 69
           GG +C Q++GT+G +G  +T      +SND++TVTEHQV KLMEEDMGSAMQYLQGKGLC
Sbjct: 362 GGGDCIQASGTSGPTGGRATNGTQTTTSNDSLTVTEHQVAKLMEEDMGSAMQYLQGKGLC 421

Query: 70  LMPISLATAISTATCHSR-PITAS-------------------KGGGDPPTSPSLSALTV 129
           LMPISLATAIST TCHSR P+ A+                       D P+SPS+S LTV
Sbjct: 422 LMPISLATAISTTTCHSRNPMVAAAAVAASNINNGSHTHPLLPNSNADGPSSPSMSVLTV 481

The following BLAST results are available for this feature:

BLAST of CsGy2G002590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139396.1	9.5e-58	95.31	PREDICTED: transcription factor bHLH66-like [Cucumis sativus] >KGN60760.1 hypoth...	[more]
XP_023545593.1	8.4e-46	82.79	transcription factor bHLH66-like [Cucurbita pepo subsp. pepo]	[more]
XP_022143019.1	6.0e-44	80.17	transcription factor bHLH66-like [Momordica charantia]	[more]
XP_023538199.1	6.6e-43	80.83	transcription factor bHLH69-like [Cucurbita pepo subsp. pepo]	[more]
XP_022937836.1	7.3e-42	83.48	transcription factor bHLH69-like [Cucurbita moschata]	[more]

BLAST of CsGy2G002590 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G24260.1	1.7e-24	54.01	LJRHL1-like 1	[more]
AT4G30980.1	5.6e-20	56.78	LJRHL1-like 2	[more]
AT5G58010.1	7.6e-17	48.18	LJRHL1-like 3	[more]
AT1G03040.1	6.5e-08	53.03	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G02590.1	8.4e-08	54.55	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of CsGy2G002590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZUG9\|BH066_ARATH	3.1e-23	54.01	Transcription factor bHLH66 OS=Arabidopsis thaliana OX=3702 GN=BHLH66 PE=1 SV=1	[more]
sp\|Q8S3D5\|BH069_ARATH	1.0e-18	56.78	Transcription factor bHLH69 OS=Arabidopsis thaliana OX=3702 GN=BHLH69 PE=2 SV=2	[more]
sp\|Q9LSQ3\|BH082_ARATH	1.4e-15	48.18	Transcription factor bHLH82 OS=Arabidopsis thaliana OX=3702 GN=BHLH82 PE=2 SV=1	[more]
sp\|Q93Y00\|BH007_ARATH	1.2e-06	53.03	Transcription factor bHLH7 OS=Arabidopsis thaliana OX=3702 GN=BHLH7 PE=1 SV=1	[more]
sp\|O22768\|UNE12_ARATH	1.5e-06	54.55	Transcription factor UNE12 OS=Arabidopsis thaliana OX=3702 GN=UNE12 PE=2 SV=2	[more]

BLAST of CsGy2G002590 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LFE4\|A0A0A0LFE4_CUCSA	6.3e-58	95.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009480 PE=4 SV=1	[more]
tr\|A0A2P5C0J2\|A0A2P5C0J2_PARAD	5.4e-33	67.97	Basic helix-loop-helix transcription factor OS=Parasponia andersonii OX=3476 GN=...	[more]
tr\|A0A2P5F3C2\|A0A2P5F3C2_9ROSA	2.7e-32	67.19	Basic helix-loop-helix transcription factor OS=Trema orientalis OX=63057 GN=TorB...	[more]
tr\|B9SBX4\|B9SBX4_RICCO	2.5e-30	60.29	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0700090 PE=4 SV=1	[more]
tr\|F6HYI3\|F6HYI3_VITVI	3.6e-29	55.94	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0037g00040 PE=4 SV=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G002590.1	CsGy2G002590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..129
None	No IPR available	PANTHER	PTHR16223	FAMILY NOT NAMED	coord: 27..90
None	No IPR available	PANTHER	PTHR16223:SF28	TRANSCRIPTION FACTOR BHLH66-RELATED	coord: 27..90

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G002590	Bhi06G001539	Wax gourd	cgybwgoB130

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G002590	Cucumber (Chinese Long) v3	cgybcucB064
CsGy2G002590	Watermelon (97103) v2	cgybwmbB114
CsGy2G002590	Wax gourd	cgybwgoB133
CsGy2G002590	Cucurbita pepo (Zucchini)	cgybcpeB168
CsGy2G002590	Cucurbita maxima (Rimu)	cgybcmaB178
CsGy2G002590	Cucurbita maxima (Rimu)	cgybcmaB257
CsGy2G002590	Cucurbita moschata (Rifu)	cgybcmoB170
CsGy2G002590	Cucurbita moschata (Rifu)	cgybcmoB243
CsGy2G002590	Cucurbita pepo (Zucchini)	cgybcpeB262
CsGy2G002590	Cucurbita pepo (Zucchini)	cgybcpeB271
CsGy2G002590	Cucumber (Chinese Long) v2	cgybcuB056
CsGy2G002590	Bottle gourd (USVL1VR-Ls)	cgyblsiB089
CsGy2G002590	Melon (DHL92) v3.5.1	cgybmeB120
CsGy2G002590	Melon (DHL92) v3.6.1	cgybmedB118
CsGy2G002590	Watermelon (Charleston Gray)	cgybwcgB119
CsGy2G002590	Watermelon (97103) v1	cgybwmB140
CsGy2G002590	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G002590	Silver-seed gourd	carcgybB0269
CsGy2G002590	Silver-seed gourd	carcgybB1053