CsGy2G001260 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G001260
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr2 : 825647 .. 825898 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGACGCGGTGCACCACAATAACATGGGCCCCTCATCAGCGCCGACGATCCAGCCGAAGGAACGCGTGGGACCCGCTTCCAAACTGGCTATTGGTTGTCGCTTTCTTAGCGTGGGGGCGCTGATATGATCTGACCTGGCATAGGTTTCTCCACCGTCGGATCATCTTTGATGATGCTGGATCAGCATCATGTACGATGTGGACGCCCGCAGCGGATCGAGATCGAAGTGACGATGCTTTGACTTGGTAA

mRNA sequence

ATGTGGACGCGGTGCACCACAATAACATGGGCCCCTCATCAGCGCCGACGATCCAGCCGAAGGAACGCGTGGGACCCGCTTCCAAACTGGCTATTGGTTGTCGCTTTCTTAGCGTTTCTCCACCGTCGGATCATCTTTGATGATGCTGGATCAGCATCATGTACGATGTGGACGCCCGCAGCGGATCGAGATCGAAGTGACGATGCTTTGACTTGGTAA

Coding sequence (CDS)

ATGTGGACGCGGTGCACCACAATAACATGGGCCCCTCATCAGCGCCGACGATCCAGCCGAAGGAACGCGTGGGACCCGCTTCCAAACTGGCTATTGGTTGTCGCTTTCTTAGCGTTTCTCCACCGTCGGATCATCTTTGATGATGCTGGATCAGCATCATGTACGATGTGGACGCCCGCAGCGGATCGAGATCGAAGTGACGATGCTTTGACTTGGTAA

Protein sequence

MWTRCTTITWAPHQRRRSSRRNAWDPLPNWLLVVAFLAFLHRRIIFDDAGSASCTMWTPAADRDRSDDALTW
Homology
[Close]
BLAST of CsGy2G001260 vs. NCBI nr
Match: KGN60626.1 (hypothetical protein Csa_2G004750 [Cucumis sativus])

HSP 1 Score: 161.4 bits (407), Expect = 1.2e-36
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MWTRCTTITWAPHQRRRSSRRNAWDPLPNWLLVVAFLAFLHRRIIFDDAGSASCTMWTPA 60
          MWTRCTTITWAPHQRRRSSRRNAWDPLPNWLLVVAFLAFLHRRIIFDDAGSASCTMWTPA
Sbjct: 1  MWTRCTTITWAPHQRRRSSRRNAWDPLPNWLLVVAFLAFLHRRIIFDDAGSASCTMWTPA 60

Query: 61 ADRDRSDDALTW 73
          ADRDRSDDALTW
Sbjct: 61 ADRDRSDDALTW 72

[Close]
BLAST of CsGy2G001260 vs. TrEMBL
Match: tr|A0A0A0LKU6|A0A0A0LKU6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004750 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 7.6e-37
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MWTRCTTITWAPHQRRRSSRRNAWDPLPNWLLVVAFLAFLHRRIIFDDAGSASCTMWTPA 60
          MWTRCTTITWAPHQRRRSSRRNAWDPLPNWLLVVAFLAFLHRRIIFDDAGSASCTMWTPA
Sbjct: 1  MWTRCTTITWAPHQRRRSSRRNAWDPLPNWLLVVAFLAFLHRRIIFDDAGSASCTMWTPA 60

Query: 61 ADRDRSDDALTW 73
          ADRDRSDDALTW
Sbjct: 61 ADRDRSDDALTW 72

The following BLAST results are available for this feature:
BLAST of CsGy2G001260 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60626.11.2e-36100.00hypothetical protein Csa_2G004750 [Cucumis sativus][more]
BLAST of CsGy2G001260 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy2G001260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy2G001260 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LKU6|A0A0A0LKU6_CUCSA7.6e-37100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004750 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G001260.1CsGy2G001260.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy2G001260Csa2G004750Cucumber (Chinese Long) v2cgybcuB056
CsGy2G001260CsaV3_2G002340Cucumber (Chinese Long) v3cgybcucB064
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G001260Cucurbita pepo (Zucchini)cgybcpeB168
CsGy2G001260Cucurbita maxima (Rimu)cgybcmaB154
CsGy2G001260Cucurbita maxima (Rimu)cgybcmaB163
CsGy2G001260Cucurbita maxima (Rimu)cgybcmaB178
CsGy2G001260Cucurbita maxima (Rimu)cgybcmaB257
CsGy2G001260Cucurbita moschata (Rifu)cgybcmoB146
CsGy2G001260Cucurbita moschata (Rifu)cgybcmoB155
CsGy2G001260Cucurbita moschata (Rifu)cgybcmoB170
CsGy2G001260Cucurbita moschata (Rifu)cgybcmoB243
CsGy2G001260Cucurbita pepo (Zucchini)cgybcpeB204
CsGy2G001260Cucurbita pepo (Zucchini)cgybcpeB232
CsGy2G001260Cucurbita pepo (Zucchini)cgybcpeB272
CsGy2G001260Bottle gourd (USVL1VR-Ls)cgyblsiB089
CsGy2G001260Bottle gourd (USVL1VR-Ls)cgyblsiB120
CsGy2G001260Melon (DHL92) v3.5.1cgybmeB095
CsGy2G001260Melon (DHL92) v3.5.1cgybmeB121
CsGy2G001260Melon (DHL92) v3.6.1cgybmedB096
CsGy2G001260Melon (DHL92) v3.6.1cgybmedB119
CsGy2G001260Watermelon (Charleston Gray)cgybwcgB094
CsGy2G001260Watermelon (97103) v1cgybwmB154
CsGy2G001260Wild cucumber (PI 183967)cgybcpiB056
CsGy2G001260Silver-seed gourdcarcgybB0041
CsGy2G001260Silver-seed gourdcarcgybB0137
CsGy2G001260Silver-seed gourdcarcgybB0292
CsGy2G001260Silver-seed gourdcarcgybB0573
CsGy2G001260Cucumber (Chinese Long) v3cgybcucB059
CsGy2G001260Watermelon (97103) v2cgybwmbB098
CsGy2G001260Wax gourdcgybwgoB127
CsGy2G001260Wax gourdcgybwgoB205