CsGy2G000960 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAACTTAGCTTCTAAATTTCTTTCACAAAGATATAAGTATGAAATTTAATAAGATATAAGTATGAAATTTAATACTATGTTCAACACTTTTCATTTATGAGTTTAGAAGAAAATTTTACAAGTAAAAATCAATTAATATTAAATGGAAAAAAATAGCAAACTAACACATACATGAAATCACACTTTTGATCATATCATATTAAGCATAACTTTGGTACTATTGGAAAACTGACTCAATTTATTGGAGTCCCTAATAAACTATTAAGAATTGTGTGGGATTCATAAATAAATATGTAATAAATAAAATATATTTTTAAAAACTAGTAAATTCTTTATTGACATGTCGTGTCAAATAATCTACATAATAGTAGTATCTACTACTGCAACGCTAAAATTTTTCATTAGGGCTACAAATAGCGACGTGGATAACCATATATGTATATATATTAAGAAGCTAACAACAAAAGCATAATCTATGTCTTACTATAAAATTACCCTAATTAAGTTTAAGAAGCTGATGAATTGAAGCTTTTCCTCGTGAGATTGATTCAAACATTTTGTTGATGATCATCATCACGAACAAAACTCTTCCAAAAAGGATGATTTTCCCAAAGAAGATAAATCTCTCAATAGGAACTTGCTTAGTTTCAGGCAAAAGAAAGTAGATGAAGCAACTCATGAGAAATATCAAAGCTGCAAAGAGAATGAAAATGCCATAGCGAAGATGACACATTGCGGCCAAAAAGCACTGAGCGATGAGGCCGTGAATAAGAGGTTTACGCAGACCACGATGCTTTGGCCGGCGGATCTTGTTTCTAATGGAAATAACTCGCTTGGAACTAACCATCCTAATGGACCCCATGACCGTCCGTACGCCAAAACGAATAGCCAAATTAAGCACACTAGCAATATGCTTACGCCTTTGATAGCTCCTTTCCTTGACCGAAGTTTAGTTTAG ATGAAAAACTTAGCTTCTAAATTTCTTTCACAAAGATATAAGCAAAAGAAAGTAGATGAAGCAACTCATGAGAAATATCAAAGCTGCAAAGAGAATGAAAATGCCATAGCGAAGATGACACATTGCGGCCAAAAAGCACTGAGCGATGAGGCCGTGAATAAGAGGTTTACGCAGACCACGATGCTTTGGCCGGCGGATCTTGTTTCTAATGGAAATAACTCGCTTGGAACTAACCATCCTAATGGACCCCATGACCGTCCGTACGCCAAAACGAATAGCCAAATTAAGCACACTAGCAATATGCTTACGCCTTTGATAGCTCCTTTCCTTGACCGAAGTTTAGTTTAG ATGAAAAACTTAGCTTCTAAATTTCTTTCACAAAGATATAAGCAAAAGAAAGTAGATGAAGCAACTCATGAGAAATATCAAAGCTGCAAAGAGAATGAAAATGCCATAGCGAAGATGACACATTGCGGCCAAAAAGCACTGAGCGATGAGGCCGTGAATAAGAGGTTTACGCAGACCACGATGCTTTGGCCGGCGGATCTTGTTTCTAATGGAAATAACTCGCTTGGAACTAACCATCCTAATGGACCCCATGACCGTCCGTACGCCAAAACGAATAGCCAAATTAAGCACACTAGCAATATGCTTACGCCTTTGATAGCTCCTTTCCTTGACCGAAGTTTAGTTTAG MKNLASKFLSQRYKQKKVDEATHEKYQSCKENENAIAKMTHCGQKALSDEAVNKRFTQTTMLWPADLVSNGNNSLGTNHPNGPHDRPYAKTNSQIKHTSNMLTPLIAPFLDRSLV
BLAST of CsGy2G000960 vs. NCBI nr
Match: KVI11579.1 (hypothetical protein Ccrd_010009 [Cynara cardunculus var. scolymus]) HSP 1 Score: 68.2 bits (165), Expect = 2.1e-08 Identity = 36/64 (56.25%), Postives = 40/64 (62.50%), Query Frame = 0
BLAST of CsGy2G000960 vs. NCBI nr
Match: AFK48177.1 (unknown [Medicago truncatula]) HSP 1 Score: 65.1 bits (157), Expect = 1.8e-07 Identity = 31/48 (64.58%), Postives = 35/48 (72.92%), Query Frame = 0
BLAST of CsGy2G000960 vs. NCBI nr
Match: BAT08086.1 (Os09g0416250 [Oryza sativa Japonica Group]) HSP 1 Score: 64.3 bits (155), Expect = 3.1e-07 Identity = 32/48 (66.67%), Postives = 35/48 (72.92%), Query Frame = 0
BLAST of CsGy2G000960 vs. TrEMBL
Match: tr|A0A103YM34|A0A103YM34_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_010009 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.4e-08 Identity = 36/64 (56.25%), Postives = 40/64 (62.50%), Query Frame = 0
BLAST of CsGy2G000960 vs. TrEMBL
Match: tr|I3T6N5|I3T6N5_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.2e-07 Identity = 31/48 (64.58%), Postives = 35/48 (72.92%), Query Frame = 0
BLAST of CsGy2G000960 vs. TrEMBL
Match: tr|A0A0P0XLR6|A0A0P0XLR6_ORYSJ (Os09g0416250 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0416250 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.0e-07 Identity = 32/48 (66.67%), Postives = 35/48 (72.92%), Query Frame = 0
BLAST of CsGy2G000960 vs. TrEMBL
Match: tr|A0A0A9HY81|A0A0A9HY81_ARUDO (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 7.7e-07 Identity = 31/48 (64.58%), Postives = 34/48 (70.83%), Query Frame = 0
BLAST of CsGy2G000960 vs. TrEMBL
Match: tr|M1BM75|M1BM75_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 5.0e-06 Identity = 28/48 (58.33%), Postives = 33/48 (68.75%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |