CsGy2G000550 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G000550
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	40S ribosomal protein S30
Location	Chr2 : 350811 .. 351587 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGTCCTATACCCTAACCCTAATCTTTGCCAATTTGCGTTCTTAGTTTCTAGGAAACGAAGCCGACAAGTCAGTCCACCGCTTATCAGATTCGCCATGGGTGACTCTCCCACTCTCTCAACTTCATTTACGATTCCTTTCTTTTCATCTGTTTCATGTTCCTGATTTATCTGTTTCTTCATCTCTGTAATCTACATTCAGGTAAGGTTCATGGATCTTTGGCTCGTGCCGGTAAGGTGAGAGGCCAAACACCAAAGGTTGCTAAACAAGACAAGAAGAAGAAGCCACGAGGACGTGCTCACAAACGGATGCAATACAACCGCAGATTCGTAACTGCCGGTATGTGTCTATTCTCGCAATTTTCTCTACCTCTCTTATTTTGTAATTATGTTTCTAGTTTTTTATGAATTTTAATTTCCGCTTGTAGTTGTTGGTTTTGGCAAGAAGAGAGGACCAAACTCGTCCGAGAAGTAAGAGACTCGAGAATTCGGCTGAACAGCCAATTTTTTTTCATGTTATTTGGAGATATTTTATACTTTCTTTAGTTCTTTTTTGATGTGGTTAAGCTGACAATTTATCTTGACGATGATAGTATTATTTCTTTAAGAAGTTATCTGTTTCATCATTTGATAATTGGCTTATGTTTTAGCAATCTGAGTTTTGTTCTGTTGTTTCGGTAGAAATTATTACTGGGAAACTGCTTTTGGAATCGTGTCCTTGAAGTGGGATATAGGATCAGTTAGAATTGATCTATTTCTCGTTATTAGGAGGTGA

mRNA sequence

ATGTTGGTCCTATACCCTAACCCTAATCTTTGCCAATTTGCGTTCTTAGTTTCTAGGAAACGAAGCCGACAAGTCAGTCCACCGCTTATCAGATTCGCCATGGGTAAGGTTCATGGATCTTTGGCTCGTGCCGGTAAGGTGAGAGGCCAAACACCAAAGGTTGCTAAACAAGACAAGAAGAAGAAGCCACGAGGACGTGCTCACAAACGGATGCAATACAACCGCAGATTCGTAACTGCCGTTGTTGGTTTTGGCAAGAAGAGAGGACCAAACTCGTCCGAGAAAAATTATTACTGGGAAACTGCTTTTGGAATCGTGTCCTTGAAGTGGGATATAGGATCAGTTAGAATTGATCTATTTCTCGTTATTAGGAGGTGA

Coding sequence (CDS)

ATGTTGGTCCTATACCCTAACCCTAATCTTTGCCAATTTGCGTTCTTAGTTTCTAGGAAACGAAGCCGACAAGTCAGTCCACCGCTTATCAGATTCGCCATGGGTAAGGTTCATGGATCTTTGGCTCGTGCCGGTAAGGTGAGAGGCCAAACACCAAAGGTTGCTAAACAAGACAAGAAGAAGAAGCCACGAGGACGTGCTCACAAACGGATGCAATACAACCGCAGATTCGTAACTGCCGTTGTTGGTTTTGGCAAGAAGAGAGGACCAAACTCGTCCGAGAAAAATTATTACTGGGAAACTGCTTTTGGAATCGTGTCCTTGAAGTGGGATATAGGATCAGTTAGAATTGATCTATTTCTCGTTATTAGGAGGTGA

Protein sequence

MLVLYPNPNLCQFAFLVSRKRSRQVSPPLIRFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEKNYYWETAFGIVSLKWDIGSVRIDLFLVIRR

Homology

[Close]

BLAST of CsGy2G000550 vs. NCBI nr
Match: KGN60553.1 (40S ribosomal protein S30-like [Cucumis sativus])

HSP 1 Score: 189.9 bits (481), Expect = 5.3e-45
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MLVLYPNPNLCQFAFLVSRKRSRQVSPPLIRFAMGKVHGSLARAGKVRGQTPKVAKQDKK 60
          MLVLYPNPNLCQFAFLVSRKRSRQVSPPLIRFAMGKVHGSLARAGKVRGQTPKVAKQDKK
Sbjct: 1  MLVLYPNPNLCQFAFLVSRKRSRQVSPPLIRFAMGKVHGSLARAGKVRGQTPKVAKQDKK 60

Query: 61 KKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK 96
          KKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
Sbjct: 61 KKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK 95

[Close]

BLAST of CsGy2G000550 vs. NCBI nr
Match: XP_013681480.2 (40S ribosomal protein S30 [Brassica napus] >CDY43497.1 BnaA01g07470D [Brassica napus])

HSP 1 Score: 128.3 bits (321), Expect = 1.9e-26
Identity = 65/87 (74.71%), Postives = 72/87 (82.76%), Query Frame = 0


Query: 16  LVSRKRSRQVSP-------PLIRFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAH 75
           ++ R+R    SP       P ++  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAH
Sbjct: 14  IIHRRREENPSPFAGGSADPFVKTTMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAH 73

Query: 76  KRMQYNRRFVTAVVGFGKKRGPNSSEK 96
           KR+Q+NRRFVTAVVGFGKKRGPNSSEK
Sbjct: 74  KRLQHNRRFVTAVVGFGKKRGPNSSEK 100

[Close]

BLAST of CsGy2G000550 vs. NCBI nr
Match: PKI61372.1 (hypothetical protein CRG98_018220 [Punica granatum])

HSP 1 Score: 128.3 bits (321), Expect = 1.9e-26
Identity = 65/82 (79.27%), Postives = 71/82 (86.59%), Query Frame = 0


Query: 16  LVSRKRSRQVSPPLIRFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNR 75
           ++SR  +   + P    AMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNR
Sbjct: 47  ILSRIEAAAKTRPAAASAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNR 106

Query: 76  RFVTAVVGFGKKRGPNSSEKNY 98
           RFVTAVVGFGKKRGPNSSE ++
Sbjct: 107 RFVTAVVGFGKKRGPNSSENSH 128

[Close]

BLAST of CsGy2G000550 vs. NCBI nr
Match: ESQ42751.1 (hypothetical protein EUTSA_v10015110mg [Eutrema salsugineum])

HSP 1 Score: 127.5 bits (319), Expect = 3.2e-26
Identity = 66/86 (76.74%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 10 LCQFAFLVSRKRSRQVSPPLIRFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHK 69
          + QF        SR+      + AMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHK
Sbjct: 14 ITQFTLAFQHSCSRRKKKERSKSAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHK 73

Query: 70 RMQYNRRFVTAVVGFGKKRGPNSSEK 96
          RMQ+NRRFVTAVVGFGKKRGPNSSEK
Sbjct: 74 RMQHNRRFVTAVVGFGKKRGPNSSEK 99

[Close]

BLAST of CsGy2G000550 vs. NCBI nr
Match: ESR64610.1 (hypothetical protein CICLE_v10009868mg [Citrus clementina] >GAY50417.1 hypothetical protein CUMW_126480 [Citrus unshiu])

HSP 1 Score: 127.5 bits (319), Expect = 3.2e-26
Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 29  LIRFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKR 88
           L R AMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKR
Sbjct: 67  LKRSAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKR 126

Query: 89  GPNSSEK 96
           GPNSSEK
Sbjct: 127 GPNSSEK 133

[Close]

BLAST of CsGy2G000550 vs. TAIR10
Match: AT2G19750.1 (Ribosomal protein S30 family protein)

HSP 1 Score: 121.3 bits (303), Expect = 4.2e-28
Identity = 60/62 (96.77%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 34 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 93
          MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSS
Sbjct: 1  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFVTAVVGFGKKRGPNSS 60

Query: 94 EK 96
          EK
Sbjct: 61 EK 62

[Close]

BLAST of CsGy2G000550 vs. TAIR10
Match: AT4G29390.1 (Ribosomal protein S30 family protein)

HSP 1 Score: 121.3 bits (303), Expect = 4.2e-28
Identity = 60/62 (96.77%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 34 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 93
          MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSS
Sbjct: 1  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFVTAVVGFGKKRGPNSS 60

Query: 94 EK 96
          EK
Sbjct: 61 EK 62

[Close]

BLAST of CsGy2G000550 vs. TAIR10
Match: AT5G56670.1 (Ribosomal protein S30 family protein)

HSP 1 Score: 121.3 bits (303), Expect = 4.2e-28
Identity = 60/62 (96.77%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 34 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 93
          MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSS
Sbjct: 1  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFVTAVVGFGKKRGPNSS 60

Query: 94 EK 96
          EK
Sbjct: 61 EK 62

[Close]

BLAST of CsGy2G000550 vs. Swiss-Prot
Match: sp|P49689|RS30_ARATH (40S ribosomal protein S30 OS=Arabidopsis thaliana OX=3702 GN=RPS30A PE=3 SV=3)

HSP 1 Score: 121.3 bits (303), Expect = 7.5e-27
Identity = 60/62 (96.77%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 34 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 93
          MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSS
Sbjct: 1  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFVTAVVGFGKKRGPNSS 60

Query: 94 EK 96
          EK
Sbjct: 61 EK 62

[Close]

BLAST of CsGy2G000550 vs. Swiss-Prot
Match: sp|P62866|RS30_BOVIN (40S ribosomal protein S30 OS=Bos taurus OX=9913 GN=FAU PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.9e-18
Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0


Query: 36 KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 94
          KVHGSLARAGKVRGQTPKVAKQ+KKKK  GRA +RMQYNRRFV  V  FGKK+GPN++
Sbjct: 1  KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 58

[Close]

BLAST of CsGy2G000550 vs. Swiss-Prot
Match: sp|P62860|RS30_CRIGR (40S ribosomal protein S30 OS=Cricetulus griseus OX=10029 GN=FAU PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.9e-18
Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0


Query: 36 KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 94
          KVHGSLARAGKVRGQTPKVAKQ+KKKK  GRA +RMQYNRRFV  V  FGKK+GPN++
Sbjct: 1  KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 58

[Close]

BLAST of CsGy2G000550 vs. Swiss-Prot
Match: sp|P62861|RS30_HUMAN (40S ribosomal protein S30 OS=Homo sapiens OX=9606 GN=FAU PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.9e-18
Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0


Query: 36 KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 94
          KVHGSLARAGKVRGQTPKVAKQ+KKKK  GRA +RMQYNRRFV  V  FGKK+GPN++
Sbjct: 1  KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 58

[Close]

BLAST of CsGy2G000550 vs. Swiss-Prot
Match: sp|P62862|RS30_MOUSE (40S ribosomal protein S30 OS=Mus musculus OX=10090 GN=Fau PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.9e-18
Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0


Query: 36 KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 94
          KVHGSLARAGKVRGQTPKVAKQ+KKKK  GRA +RMQYNRRFV  V  FGKK+GPN++
Sbjct: 1  KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 58

[Close]

BLAST of CsGy2G000550 vs. TrEMBL
Match: tr|A0A0A0LFS8|A0A0A0LFS8_CUCSA (40S ribosomal protein S30 OS=Cucumis sativus OX=3659 GN=Csa_2G000610 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.5e-45
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MLVLYPNPNLCQFAFLVSRKRSRQVSPPLIRFAMGKVHGSLARAGKVRGQTPKVAKQDKK 60
          MLVLYPNPNLCQFAFLVSRKRSRQVSPPLIRFAMGKVHGSLARAGKVRGQTPKVAKQDKK
Sbjct: 1  MLVLYPNPNLCQFAFLVSRKRSRQVSPPLIRFAMGKVHGSLARAGKVRGQTPKVAKQDKK 60

Query: 61 KKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK 96
          KKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
Sbjct: 61 KKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK 95

[Close]

BLAST of CsGy2G000550 vs. TrEMBL
Match: tr|A0A078I063|A0A078I063_BRANA (40S ribosomal protein S30 OS=Brassica napus OX=3708 GN=BnaA01g07470D PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-26
Identity = 65/87 (74.71%), Postives = 72/87 (82.76%), Query Frame = 0


Query: 16  LVSRKRSRQVSP-------PLIRFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAH 75
           ++ R+R    SP       P ++  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAH
Sbjct: 14  IIHRRREENPSPFAGGSADPFVKTTMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAH 73

Query: 76  KRMQYNRRFVTAVVGFGKKRGPNSSEK 96
           KR+Q+NRRFVTAVVGFGKKRGPNSSEK
Sbjct: 74  KRLQHNRRFVTAVVGFGKKRGPNSSEK 100

[Close]

BLAST of CsGy2G000550 vs. TrEMBL
Match: tr|A0A2I0JYP6|A0A2I0JYP6_PUNGR (40S ribosomal protein S30 OS=Punica granatum OX=22663 GN=CRG98_018220 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-26
Identity = 65/82 (79.27%), Postives = 71/82 (86.59%), Query Frame = 0


Query: 16  LVSRKRSRQVSPPLIRFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNR 75
           ++SR  +   + P    AMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNR
Sbjct: 47  ILSRIEAAAKTRPAAASAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNR 106

Query: 76  RFVTAVVGFGKKRGPNSSEKNY 98
           RFVTAVVGFGKKRGPNSSE ++
Sbjct: 107 RFVTAVVGFGKKRGPNSSENSH 128

[Close]

BLAST of CsGy2G000550 vs. TrEMBL
Match: tr|V4UK23|V4UK23_9ROSI (40S ribosomal protein S30 OS=Citrus clementina OX=85681 GN=CICLE_v10009868mg PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.1e-26
Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 29  LIRFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKR 88
           L R AMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKR
Sbjct: 67  LKRSAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKR 126

Query: 89  GPNSSEK 96
           GPNSSEK
Sbjct: 127 GPNSSEK 133

[Close]

BLAST of CsGy2G000550 vs. TrEMBL
Match: tr|A0A2H5PDI2|A0A2H5PDI2_CITUN (40S ribosomal protein S30 OS=Citrus unshiu OX=55188 GN=CUMW_126480 PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.1e-26
Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 29  LIRFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKR 88
           L R AMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKR
Sbjct: 67  LKRSAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKR 126

Query: 89  GPNSSEK 96
           GPNSSEK
Sbjct: 127 GPNSSEK 133

The following BLAST results are available for this feature:

BLAST of CsGy2G000550 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60553.1	5.3e-45	100.00	40S ribosomal protein S30-like [Cucumis sativus]	[more]
XP_013681480.2	1.9e-26	74.71	40S ribosomal protein S30 [Brassica napus] >CDY43497.1 BnaA01g07470D [Brassica n...	[more]
PKI61372.1	1.9e-26	79.27	hypothetical protein CRG98_018220 [Punica granatum]	[more]
ESQ42751.1	3.2e-26	76.74	hypothetical protein EUTSA_v10015110mg [Eutrema salsugineum]	[more]
ESR64610.1	3.2e-26	97.01	hypothetical protein CICLE_v10009868mg [Citrus clementina] >GAY50417.1 hypotheti...	[more]

BLAST of CsGy2G000550 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G19750.1	4.2e-28	96.77	Ribosomal protein S30 family protein	[more]
AT4G29390.1	4.2e-28	96.77	Ribosomal protein S30 family protein	[more]
AT5G56670.1	4.2e-28	96.77	Ribosomal protein S30 family protein	[more]

BLAST of CsGy2G000550 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P49689\|RS30_ARATH	7.5e-27	96.77	40S ribosomal protein S30 OS=Arabidopsis thaliana OX=3702 GN=RPS30A PE=3 SV=3	[more]
sp\|P62866\|RS30_BOVIN	4.9e-18	79.31	40S ribosomal protein S30 OS=Bos taurus OX=9913 GN=FAU PE=3 SV=1	[more]
sp\|P62860\|RS30_CRIGR	4.9e-18	79.31	40S ribosomal protein S30 OS=Cricetulus griseus OX=10029 GN=FAU PE=3 SV=1	[more]
sp\|P62861\|RS30_HUMAN	4.9e-18	79.31	40S ribosomal protein S30 OS=Homo sapiens OX=9606 GN=FAU PE=1 SV=1	[more]
sp\|P62862\|RS30_MOUSE	4.9e-18	79.31	40S ribosomal protein S30 OS=Mus musculus OX=10090 GN=Fau PE=1 SV=1	[more]

BLAST of CsGy2G000550 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LFS8\|A0A0A0LFS8_CUCSA	3.5e-45	100.00	40S ribosomal protein S30 OS=Cucumis sativus OX=3659 GN=Csa_2G000610 PE=3 SV=1	[more]
tr\|A0A078I063\|A0A078I063_BRANA	1.2e-26	74.71	40S ribosomal protein S30 OS=Brassica napus OX=3708 GN=BnaA01g07470D PE=3 SV=1	[more]
tr\|A0A2I0JYP6\|A0A2I0JYP6_PUNGR	1.2e-26	79.27	40S ribosomal protein S30 OS=Punica granatum OX=22663 GN=CRG98_018220 PE=3 SV=1	[more]
tr\|V4UK23\|V4UK23_9ROSI	2.1e-26	97.01	40S ribosomal protein S30 OS=Citrus clementina OX=85681 GN=CICLE_v10009868mg PE=...	[more]
tr\|A0A2H5PDI2\|A0A2H5PDI2_CITUN	2.1e-26	97.01	40S ribosomal protein S30 OS=Citrus unshiu OX=55188 GN=CUMW_126480 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome
GO:0005622	intracellular

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR006846	Ribosomal_S30

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G000550.1	CsGy2G000550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006846	Ribosomal protein S30	PFAM	PF04758	Ribosomal_S30	coord: 36..92 e-value: 2.8E-30 score: 104.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..69
None	No IPR available	PANTHER	PTHR12650	40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI	coord: 31..93
None	No IPR available	PANTHER	PTHR12650:SF15	RIBOSOMAL PROTEIN S30, ISOFORM A	coord: 31..93

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G000550	Cla016819	Watermelon (97103) v1	cgybwmB154
CsGy2G000550	Csa2G000610	Cucumber (Chinese Long) v2	cgybcuB056
CsGy2G000550	MELO3C004612	Melon (DHL92) v3.5.1	cgybmeB121
CsGy2G000550	ClCG11G001900	Watermelon (Charleston Gray)	cgybwcgB094
CsGy2G000550	CSPI02G00590	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G000550	CmaCh05G013870	Cucurbita maxima (Rimu)	cgybcmaB257
CsGy2G000550	CmoCh05G013890	Cucurbita moschata (Rifu)	cgybcmoB243
CsGy2G000550	Lsi11G002020	Bottle gourd (USVL1VR-Ls)	cgyblsiB089
CsGy2G000550	MELO3C004612.2	Melon (DHL92) v3.6.1	cgybmedB119
CsGy2G000550	CsaV3_2G001630	Cucumber (Chinese Long) v3	cgybcucB064
CsGy2G000550	Bhi06G001432	Wax gourd	cgybwgoB125
CsGy2G000550	Carg10818	Silver-seed gourd	carcgybB0573

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G000550	Watermelon (97103) v2	cgybwmbB098
CsGy2G000550	Watermelon (97103) v2	cgybwmbB123
CsGy2G000550	Watermelon (97103) v2	cgybwmbB150
CsGy2G000550	Wax gourd	cgybwgoB138
CsGy2G000550	Wax gourd	cgybwgoB202
CsGy2G000550	Cucurbita pepo (Zucchini)	cgybcpeB168
CsGy2G000550	Cucumber (Gy14) v2	cgybcgybB011
CsGy2G000550	Cucurbita maxima (Rimu)	cgybcmaB154
CsGy2G000550	Cucurbita maxima (Rimu)	cgybcmaB163
CsGy2G000550	Cucurbita maxima (Rimu)	cgybcmaB178
CsGy2G000550	Cucurbita maxima (Rimu)	cgybcmaB173
CsGy2G000550	Cucurbita maxima (Rimu)	cgybcmaB202
CsGy2G000550	Cucurbita moschata (Rifu)	cgybcmoB146
CsGy2G000550	Cucurbita moschata (Rifu)	cgybcmoB155
CsGy2G000550	Cucurbita moschata (Rifu)	cgybcmoB165
CsGy2G000550	Cucurbita moschata (Rifu)	cgybcmoB170
CsGy2G000550	Cucurbita moschata (Rifu)	cgybcmoB179
CsGy2G000550	Cucurbita moschata (Rifu)	cgybcmoB196
CsGy2G000550	Cucurbita pepo (Zucchini)	cgybcpeB204
CsGy2G000550	Cucurbita pepo (Zucchini)	cgybcpeB225
CsGy2G000550	Cucurbita pepo (Zucchini)	cgybcpeB230
CsGy2G000550	Cucurbita pepo (Zucchini)	cgybcpeB232
CsGy2G000550	Cucurbita pepo (Zucchini)	cgybcpeB267
CsGy2G000550	Cucurbita pepo (Zucchini)	cgybcpeB272
CsGy2G000550	Cucumber (Chinese Long) v2	cgybcuB053
CsGy2G000550	Bottle gourd (USVL1VR-Ls)	cgyblsiB123
CsGy2G000550	Bottle gourd (USVL1VR-Ls)	cgyblsiB125
CsGy2G000550	Melon (DHL92) v3.5.1	cgybmeB096
CsGy2G000550	Melon (DHL92) v3.5.1	cgybmeB113
CsGy2G000550	Melon (DHL92) v3.6.1	cgybmedB093
CsGy2G000550	Watermelon (Charleston Gray)	cgybwcgB128
CsGy2G000550	Watermelon (Charleston Gray)	cgybwcgB151
CsGy2G000550	Watermelon (97103) v1	cgybwmB112
CsGy2G000550	Watermelon (97103) v1	cgybwmB115
CsGy2G000550	Wild cucumber (PI 183967)	cgybcpiB053
CsGy2G000550	Silver-seed gourd	carcgybB0041
CsGy2G000550	Silver-seed gourd	carcgybB0102
CsGy2G000550	Silver-seed gourd	carcgybB0882
CsGy2G000550	Silver-seed gourd	carcgybB0886
CsGy2G000550	Cucumber (Chinese Long) v3	cgybcucB060