CsGy2G000120 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G000120
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	ATP-dependent DNA helicase
Location	Chr2 : 102241 .. 103742 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGAGTCTCCTAGTACGCTTTTTTTTTCTGATGGACTATATACTTCATGGCAGAATGATAAACATGACAAGAATAGTGTATCTACATCACTTAGGAAAGCTAGCAGGGAGAGATTAGAGAATTCTCTAGAGCAGGCTCAGCAACGGCTTGGGAGCACCAAGTAAGTTATCATGCTTTTTTCGCTGGCGGAGCTTTTAGTATTTCTTCATTGAATTTCAAGTAGCAATAAAACGTCCGTTGCCTTTCTGATTTTACTTAGACGCTCATTTTCTTGAGATAATCAGTTGGCAGATTTTCATTTTGTGTCATGTCCACCAATTGAACAGTGGACAACAATATCACTAACAGCGTTGTTGGTGCCATTTATCGACAATAAATTCCATGCATTTCTCCTGGTAACTAAACTAGTTCACTCCTCAGTGACACAGGAGCGTGCATGCTCGTATTATGGATTTTAGTTCTGCAAACTTGTACAGTTATACATGATTTAAAAATTTTCATCTGGATTGGAATTCTTTCAGGATTGAAGTGGAAAGATATGCTTGTTTTCTTGAGCATGAGTGCTACGAGAAGTATGGAAGAACAGGGAAATCATTCTATTATTCACAAGTTGCTAGTACAGTGCGGTGGCTGTGGACAGCAAGTTCTACAGAGTTGACCAATCGGCTTAGCATCGCTGATAACCCTTCTTCAGAGAAGAATAGAGAACTTCCTGCATTGCCATCTCCATCCCCAGTGTTGGATCTCGCGAAGTTAGCAATGAAAAATGAAGAATTTTGTAGCAGCAACCTAGTTTTGGAAACTTCAGCGACTAATGTGGCAGAGCGAAAGGCTTCCCCTGCAGTTTCTTTGCCTTCAATTCCTTCCTTCTCAGAATTTGTTAATGGTATAAAGGAAGAGGCGAATCAATCAAATAAATCACATGGGCACTCGCTCGACAGAGATGAAAAGGATCCAGTGAAGAAGGCAAGGTTGGGGTAGACTTTCTTGTCTCCAAAAATTTTCTTTTGTTTTGTTATTGTTTTCTTGGGCCAACCATGAAGAACAGAACTCGAATGATATGCACATGATAGGGATATGGTTGTTACTTATTGTAAATCGTTAAAATTGAAGAGGTTTTGCTTGGAAACACTTCTGAATCTGTTCTATAGTACTCCAAGATGGCGGAATTGGATTCTGTTAGTTTGATCCAGGTTTTCTTAATGACACCTGATTCACAATTTGGAGTTAGGGGTGTAAATGGGTTGGGAGACATTCTCAAACCAATCCATATTTTTGGGTTGGTTGGGTTGTCCACCCGAATTAAGTTTTCAATCCAATCCATAAAATATGGTTTGGGTTGGGTTGTCGGGTTTGTAGTATTATTATTTTTTTCGTTTCTAAATTTTAATGTTTGTAAATCGAAATCATCAAGAATCAAGTTAAAAAAAAACTCTTGAACTCATACCATTGTTTAAATTTTATTAAATAAGAAAAATTATATATTATATTATATTAA

mRNA sequence

ATGTTGGAGTCTCCTAGTACGCTTTTTTTTTCTGATGGACTATATACTTCATGGCAGAATGATAAACATGACAAGAATAGTGTATCTACATCACTTAGGAAAGCTAGCAGGGAGAGATTAGAGAATTCTCTAGAGCAGGCTCAGCAACGGCTTGGGAGCACCAAGATTGAAGTGGAAAGATATGCTTGTTTTCTTGAGCATGAGTGCTACGAGAAGTATGGAAGAACAGGGAAATCATTCTATTATTCACAAGTTGCTAGTACAGTGCGGTGGCTGTGGACAGCAAGTTCTACAGAGTTGACCAATCGGCTTAGCATCGCTGATAACCCTTCTTCAGAGAAGAATAGAGAACTTCCTGCATTGCCATCTCCATCCCCAGTGTTGGATCTCGCGAAGTTAGCAATGAAAAATGAAGAATTTTGTAGCAGCAACCTAGTTTTGGAAACTTCAGCGACTAATGTGGCAGAGCGAAAGGCTTCCCCTGCAGTTTCTTTGCCTTCAATTCCTTCCTTCTCAGAATTTGTTAATGGTATAAAGGAAGAGGCGAATCAATCAAATAAATCACATGGGCACTCGCTCGACAGAGATGAAAAGGATCCAGTGAAGAAGGCAAGGTTGGGGTAGACTTTCTTGTCTCCAAAAATTTTCTTTTGTTTTGTTATTGTTTTCTTGGGCCAACCATGAAGAACAGAACTCGAATGATATGCACATGATAGGGATATGGTTGTTACTTATTGTAAATCGTTAAAATTGAAGAGGTTTTGCTTGGAAACACTTCTGAATCTGTTCTATAGTACTCCAAGATGGCGGAATTGGATTCTGTTAGTTTGATCCAGGTTTTCTTAATGACACCTGATTCACAATTTGGAGTTAGGGGTGTAAATGGGTTGGGAGACATTCTCAAACCAATCCATATTTTTGGGTTGGTTGGGTTGTCCACCCGAATTAAGTTTTCAATCCAATCCATAAAATATGGTTTGGGTTGGGTTGTCGGGTTTGTAGTATTATTATTTTTTTCGTTTCTAAATTTTAATGTTTGTAAATCGAAATCATCAAGAATCAAGTTAAAAAAAAACTCTTGAACTCATACCATTGTTTAAATTTTATTAAATAAGAAAAATTATATATTATATTATATTAA

Coding sequence (CDS)

ATGTTGGAGTCTCCTAGTACGCTTTTTTTTTCTGATGGACTATATACTTCATGGCAGAATGATAAACATGACAAGAATAGTGTATCTACATCACTTAGGAAAGCTAGCAGGGAGAGATTAGAGAATTCTCTAGAGCAGGCTCAGCAACGGCTTGGGAGCACCAAGATTGAAGTGGAAAGATATGCTTGTTTTCTTGAGCATGAGTGCTACGAGAAGTATGGAAGAACAGGGAAATCATTCTATTATTCACAAGTTGCTAGTACAGTGCGGTGGCTGTGGACAGCAAGTTCTACAGAGTTGACCAATCGGCTTAGCATCGCTGATAACCCTTCTTCAGAGAAGAATAGAGAACTTCCTGCATTGCCATCTCCATCCCCAGTGTTGGATCTCGCGAAGTTAGCAATGAAAAATGAAGAATTTTGTAGCAGCAACCTAGTTTTGGAAACTTCAGCGACTAATGTGGCAGAGCGAAAGGCTTCCCCTGCAGTTTCTTTGCCTTCAATTCCTTCCTTCTCAGAATTTGTTAATGGTATAAAGGAAGAGGCGAATCAATCAAATAAATCACATGGGCACTCGCTCGACAGAGATGAAAAGGATCCAGTGAAGAAGGCAAGGTTGGGGTAG

Protein sequence

MLESPSTLFFSDGLYTSWQNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGRTGKSFYYSQVASTVRWLWTASSTELTNRLSIADNPSSEKNRELPALPSPSPVLDLAKLAMKNEEFCSSNLVLETSATNVAERKASPAVSLPSIPSFSEFVNGIKEEANQSNKSHGHSLDRDEKDPVKKARLG

Homology

[Close]

BLAST of CsGy2G000120 vs. NCBI nr
Match: XP_004141074.1 (PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 364.4 bits (934), Expect = 2.6e-97
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 19  QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGRTGK 78
           QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGRTGK
Sbjct: 541 QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGRTGK 600

Query: 79  SFYYSQVASTVRWLWTASSTELTNRLSIADNPSSEKNRELPALPSPSPVLDLAKLAMKNE 138
           SFYYSQVASTVRWLWTASSTELTNRLSIADNPSSEKNRELPALPSPSPVLDLAKLAMKNE
Sbjct: 601 SFYYSQVASTVRWLWTASSTELTNRLSIADNPSSEKNRELPALPSPSPVLDLAKLAMKNE 660

Query: 139 EFCSSNLVLETSATNVAERKASPAVSLPSIPSFSEFVNGIKEEANQSNKSHGHSLDRDEK 198
           EFCSSNLVLETSATNVAERKASPAVSLPSIPSFSEFVNGIKEEANQSNKSHGHSLDRDEK
Sbjct: 661 EFCSSNLVLETSATNVAERKASPAVSLPSIPSFSEFVNGIKEEANQSNKSHGHSLDRDEK 720

Query: 199 DPVKKARLG 208
           DPVKKARLG
Sbjct: 721 DPVKKARLG 729

[Close]

BLAST of CsGy2G000120 vs. NCBI nr
Match: KGN60500.1 (hypothetical protein Csa_2G00090 [Cucumis sativus])

HSP 1 Score: 364.4 bits (934), Expect = 2.6e-97
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 19  QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGRTGK 78
           QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGRTGK
Sbjct: 448 QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGRTGK 507

Query: 79  SFYYSQVASTVRWLWTASSTELTNRLSIADNPSSEKNRELPALPSPSPVLDLAKLAMKNE 138
           SFYYSQVASTVRWLWTASSTELTNRLSIADNPSSEKNRELPALPSPSPVLDLAKLAMKNE
Sbjct: 508 SFYYSQVASTVRWLWTASSTELTNRLSIADNPSSEKNRELPALPSPSPVLDLAKLAMKNE 567

Query: 139 EFCSSNLVLETSATNVAERKASPAVSLPSIPSFSEFVNGIKEEANQSNKSHGHSLDRDEK 198
           EFCSSNLVLETSATNVAERKASPAVSLPSIPSFSEFVNGIKEEANQSNKSHGHSLDRDEK
Sbjct: 568 EFCSSNLVLETSATNVAERKASPAVSLPSIPSFSEFVNGIKEEANQSNKSHGHSLDRDEK 627

Query: 199 DPVKKARLG 208
           DPVKKARLG
Sbjct: 628 DPVKKARLG 636

[Close]

BLAST of CsGy2G000120 vs. NCBI nr
Match: XP_008459885.1 (PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X1 [Cucumis melo])

HSP 1 Score: 340.9 bits (873), Expect = 3.1e-90
Identity = 177/188 (94.15%), Postives = 180/188 (95.74%), Query Frame = 0


Query: 19  QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGRTGK 78
           QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGR GK
Sbjct: 541 QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGRAGK 600

Query: 79  SFYYSQVASTVRWLWTASSTELTNRLSIADNPSSEKNRELPALPSPSPVLDLAKLAMKNE 138
           SFYYSQVASTVRWLWTASSTELTNRLSIADN  SEKNRELPALPSPSPVLDL KL M NE
Sbjct: 601 SFYYSQVASTVRWLWTASSTELTNRLSIADNRCSEKNRELPALPSPSPVLDLPKLVMSNE 660

Query: 139 EFCSSNLVLETSATNVAERKASPAVSLPSIPSFSEFVNGIKEEANQSNKSHGHSLDRDEK 198
           EFCSSNLVLETSAT VAERKASPAVSLPSIPSFSEFVNGIKE+ANQSNKSHGHSL+RDEK
Sbjct: 661 EFCSSNLVLETSATKVAERKASPAVSLPSIPSFSEFVNGIKEKANQSNKSHGHSLNRDEK 720

Query: 199 DPVKKARL 207
           DPVK+ RL
Sbjct: 721 DPVKRGRL 728

[Close]

BLAST of CsGy2G000120 vs. NCBI nr
Match: XP_022937724.1 (ATP-dependent DNA helicase Q-like 3 isoform X2 [Cucurbita moschata])

HSP 1 Score: 230.3 bits (586), Expect = 5.8e-57
Identity = 130/191 (68.06%), Postives = 153/191 (80.10%), Query Frame = 0


Query: 19  QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGRTGK 78
           QNDK DKN VS S R+ASR+RLEN++EQAQQRLGS++IEVERYACFLEHECYEKYGRTGK
Sbjct: 542 QNDKQDKNVVSASFREASRKRLENAIEQAQQRLGSSRIEVERYACFLEHECYEKYGRTGK 601

Query: 79  SFYYSQVASTVRWLWTASSTELTNRLSIADNPSSEKNRELPALPSPSPVLDLAKLAMKNE 138
           SFYYSQVAST+RWL TA S ELT+RL       +E+N ELPALPSPSP+LDL+K    NE
Sbjct: 602 SFYYSQVASTMRWLSTADSKELTSRL------RAEENTELPALPSPSPMLDLSKSEKTNE 661

Query: 139 E-FCSSNLVLETSATNVAERKASPAVS--LPSIPSFSEFVNGIKEEANQSNKSHGHSLDR 198
           E  CS   VLE  A+N++++ ASPA +  LP IPSF+EFVNG  E+AN SNKS   S++R
Sbjct: 662 EVHCSP--VLENPASNLSKQNASPAAAAPLPPIPSFAEFVNGRMEKANHSNKSPRLSINR 721

Query: 199 DEKDPVKKARL 207
           DEKDPVK+ RL
Sbjct: 722 DEKDPVKRTRL 724

[Close]

BLAST of CsGy2G000120 vs. NCBI nr
Match: XP_022937726.1 (ATP-dependent DNA helicase Q-like 3 isoform X4 [Cucurbita moschata])

HSP 1 Score: 226.9 bits (577), Expect = 6.4e-56
Identity = 131/192 (68.23%), Postives = 153/192 (79.69%), Query Frame = 0


Query: 19  QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGST-KIEVERYACFLEHECYEKYGRTG 78
           QNDK DKN VS S R+ASR+RLEN++EQAQQRLGS+ KIEVERYACFLEHECYEKYGRTG
Sbjct: 398 QNDKQDKNVVSASFREASRKRLENAIEQAQQRLGSSFKIEVERYACFLEHECYEKYGRTG 457

Query: 79  KSFYYSQVASTVRWLWTASSTELTNRLSIADNPSSEKNRELPALPSPSPVLDLAKLAMKN 138
           KSFYYSQVAST+RWL TA S ELT+RL       +E+N ELPALPSPSP+LDL+K    N
Sbjct: 458 KSFYYSQVASTMRWLSTADSKELTSRL------RAEENTELPALPSPSPMLDLSKSEKTN 517

Query: 139 EE-FCSSNLVLETSATNVAERKASPAVS--LPSIPSFSEFVNGIKEEANQSNKSHGHSLD 198
           EE  CS   VLE  A+N++++ ASPA +  LP IPSF+EFVNG  E+AN SNKS   S++
Sbjct: 518 EEVHCSP--VLENPASNLSKQNASPAAAAPLPPIPSFAEFVNGRMEKANHSNKSPRLSIN 577

Query: 199 RDEKDPVKKARL 207
           RDEKDPVK+ RL
Sbjct: 578 RDEKDPVKRTRL 581

[Close]

BLAST of CsGy2G000120 vs. TAIR10
Match: AT4G35740.1 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 95.9 bits (237), Expect = 3.1e-20
Identity = 73/192 (38.02%), Postives = 107/192 (55.73%), Query Frame = 0


Query: 19  QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGST-KIEVERYACFLEHECYEKYGRTG 78
           Q  K +KN++S +LR +S++RL ++L +  Q L    +I+ ++ + FLE+ECY KY + G
Sbjct: 528 QVKKSEKNAISEALRDSSKQRLLDALTRVLQLLACVEEIDSQKGSEFLENECYRKYSKAG 587

Query: 79  KSFYYSQVASTVRWLWTASSTELTNRLSIADNPSSEKNRELPALPSPSPVLDLAKLAMKN 138
           KSFYYSQ+ASTVRWL TAS  EL  RLS   + + E+      L +  PV ++     + 
Sbjct: 588 KSFYYSQIASTVRWLGTASRDELMTRLSSVVSLAREQEPLEEPLLATEPVENI-----EE 647

Query: 139 EEFCSSNLVLETSATNVAERKASPAVS---LPSIPSFSEFVNGIKEEANQSNKSHGHSLD 198
           E+   +N V         E   SP +S   LP +PSFSEFVN  + +  Q+      S  
Sbjct: 648 EDDGKTNTVESRVDEPTQELVVSPILSPIRLPQVPSFSEFVN--RRKIKQNTLIDKSSEG 707

Query: 199 RDEKDPVKKARL 207
            D+K P K  +L
Sbjct: 708 FDDKKPAKIMKL 712

[Close]

BLAST of CsGy2G000120 vs. Swiss-Prot
Match: sp|Q9FT72|RQL3_ARATH (ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana OX=3702 GN=RECQL3 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.6e-19
Identity = 73/192 (38.02%), Postives = 107/192 (55.73%), Query Frame = 0


Query: 19  QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGST-KIEVERYACFLEHECYEKYGRTG 78
           Q  K +KN++S +LR +S++RL ++L +  Q L    +I+ ++ + FLE+ECY KY + G
Sbjct: 528 QVKKSEKNAISEALRDSSKQRLLDALTRVLQLLACVEEIDSQKGSEFLENECYRKYSKAG 587

Query: 79  KSFYYSQVASTVRWLWTASSTELTNRLSIADNPSSEKNRELPALPSPSPVLDLAKLAMKN 138
           KSFYYSQ+ASTVRWL TAS  EL  RLS   + + E+      L +  PV ++     + 
Sbjct: 588 KSFYYSQIASTVRWLGTASRDELMTRLSSVVSLAREQEPLEEPLLATEPVENI-----EE 647

Query: 139 EEFCSSNLVLETSATNVAERKASPAVS---LPSIPSFSEFVNGIKEEANQSNKSHGHSLD 198
           E+   +N V         E   SP +S   LP +PSFSEFVN  + +  Q+      S  
Sbjct: 648 EDDGKTNTVESRVDEPTQELVVSPILSPIRLPQVPSFSEFVN--RRKIKQNTLIDKSSEG 707

Query: 199 RDEKDPVKKARL 207
            D+K P K  +L
Sbjct: 708 FDDKKPAKIMKL 712

[Close]

BLAST of CsGy2G000120 vs. TrEMBL
Match: tr|A0A0A0LES3|A0A0A0LES3_CUCSA (ATP-dependent DNA helicase OS=Cucumis sativus OX=3659 GN=Csa_2G00090 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.7e-97
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 19  QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGRTGK 78
           QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGRTGK
Sbjct: 448 QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGRTGK 507

Query: 79  SFYYSQVASTVRWLWTASSTELTNRLSIADNPSSEKNRELPALPSPSPVLDLAKLAMKNE 138
           SFYYSQVASTVRWLWTASSTELTNRLSIADNPSSEKNRELPALPSPSPVLDLAKLAMKNE
Sbjct: 508 SFYYSQVASTVRWLWTASSTELTNRLSIADNPSSEKNRELPALPSPSPVLDLAKLAMKNE 567

Query: 139 EFCSSNLVLETSATNVAERKASPAVSLPSIPSFSEFVNGIKEEANQSNKSHGHSLDRDEK 198
           EFCSSNLVLETSATNVAERKASPAVSLPSIPSFSEFVNGIKEEANQSNKSHGHSLDRDEK
Sbjct: 568 EFCSSNLVLETSATNVAERKASPAVSLPSIPSFSEFVNGIKEEANQSNKSHGHSLDRDEK 627

Query: 199 DPVKKARLG 208
           DPVKKARLG
Sbjct: 628 DPVKKARLG 636

[Close]

BLAST of CsGy2G000120 vs. TrEMBL
Match: tr|A0A1S3CBB1|A0A1S3CBB1_CUCME (ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103498866 PE=3 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 2.0e-90
Identity = 177/188 (94.15%), Postives = 180/188 (95.74%), Query Frame = 0


Query: 19  QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGRTGK 78
           QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGR GK
Sbjct: 541 QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGRAGK 600

Query: 79  SFYYSQVASTVRWLWTASSTELTNRLSIADNPSSEKNRELPALPSPSPVLDLAKLAMKNE 138
           SFYYSQVASTVRWLWTASSTELTNRLSIADN  SEKNRELPALPSPSPVLDL KL M NE
Sbjct: 601 SFYYSQVASTVRWLWTASSTELTNRLSIADNRCSEKNRELPALPSPSPVLDLPKLVMSNE 660

Query: 139 EFCSSNLVLETSATNVAERKASPAVSLPSIPSFSEFVNGIKEEANQSNKSHGHSLDRDEK 198
           EFCSSNLVLETSAT VAERKASPAVSLPSIPSFSEFVNGIKE+ANQSNKSHGHSL+RDEK
Sbjct: 661 EFCSSNLVLETSATKVAERKASPAVSLPSIPSFSEFVNGIKEKANQSNKSHGHSLNRDEK 720

Query: 199 DPVKKARL 207
           DPVK+ RL
Sbjct: 721 DPVKRGRL 728

[Close]

BLAST of CsGy2G000120 vs. TrEMBL
Match: tr|A0A251NGV2|A0A251NGV2_PRUPE (ATP-dependent DNA helicase OS=Prunus persica OX=3760 GN=PRUPE_7G196400 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 9.6e-32
Identity = 92/192 (47.92%), Postives = 125/192 (65.10%), Query Frame = 0


Query: 19  QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGRTGK 78
           Q +K +KN++S +LR+AS++RL+N+L+QAQQRLG+ KIEVE+ A FLE+ECY KYG+TGK
Sbjct: 503 QINKPEKNAISDTLREASKQRLQNALKQAQQRLGNLKIEVEKSASFLENECYNKYGKTGK 562

Query: 79  SFYYSQVASTVRWLWTASSTELTNRLSIADNPSSEKNRELPALPSPSPVLDLAKLAMKNE 138
           SFYYSQVASTVRWL +A  T LTNRL   ++  S+      ALP   P    + L     
Sbjct: 563 SFYYSQVASTVRWLSSADYTGLTNRLGTVNSSLSD-----DALPETEPPAARSPLVEGPT 622

Query: 139 EFCSS----NLVLETSATNVAERKASPAVSLPSIPSFSEFVNGIKEEANQSNKSHGHSLD 198
           E  SS    ++  ETS        ASP++ LP IPSFS+F+N  K + N+S+ S   S +
Sbjct: 623 EITSSDFHDSVRSETSVAVSPTEIASPSIRLPPIPSFSQFINTRKTKDNRSSASEKKSPN 682

Query: 199 RDEKDPVKKARL 207
             +K+  K+ RL
Sbjct: 683 GVQKNLEKRMRL 689

[Close]

BLAST of CsGy2G000120 vs. TrEMBL
Match: tr|M5VWJ6|M5VWJ6_PRUPE (ATP-dependent DNA helicase OS=Prunus persica OX=3760 GN=PRUPE_ppa002026mg PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 9.6e-32
Identity = 92/192 (47.92%), Postives = 125/192 (65.10%), Query Frame = 0


Query: 19  QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGRTGK 78
           Q +K +KN++S +LR+AS++RL+N+L+QAQQRLG+ KIEVE+ A FLE+ECY KYG+TGK
Sbjct: 540 QINKPEKNAISDTLREASKQRLQNALKQAQQRLGNLKIEVEKSASFLENECYNKYGKTGK 599

Query: 79  SFYYSQVASTVRWLWTASSTELTNRLSIADNPSSEKNRELPALPSPSPVLDLAKLAMKNE 138
           SFYYSQVASTVRWL +A  T LTNRL   ++  S+      ALP   P    + L     
Sbjct: 600 SFYYSQVASTVRWLSSADYTGLTNRLGTVNSSLSD-----DALPETEPPAARSPLVEGPT 659

Query: 139 EFCSS----NLVLETSATNVAERKASPAVSLPSIPSFSEFVNGIKEEANQSNKSHGHSLD 198
           E  SS    ++  ETS        ASP++ LP IPSFS+F+N  K + N+S+ S   S +
Sbjct: 660 EITSSDFHDSVRSETSVAVSPTEIASPSIRLPPIPSFSQFINTRKTKDNRSSASEKKSPN 719

Query: 199 RDEKDPVKKARL 207
             +K+  K+ RL
Sbjct: 720 GVQKNLEKRMRL 726

[Close]

BLAST of CsGy2G000120 vs. TrEMBL
Match: tr|A0A251NE02|A0A251NE02_PRUPE (ATP-dependent DNA helicase OS=Prunus persica OX=3760 GN=PRUPE_7G196400 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 9.6e-32
Identity = 92/192 (47.92%), Postives = 125/192 (65.10%), Query Frame = 0


Query: 19  QNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGRTGK 78
           Q +K +KN++S +LR+AS++RL+N+L+QAQQRLG+ KIEVE+ A FLE+ECY KYG+TGK
Sbjct: 541 QINKPEKNAISDTLREASKQRLQNALKQAQQRLGNLKIEVEKSASFLENECYNKYGKTGK 600

Query: 79  SFYYSQVASTVRWLWTASSTELTNRLSIADNPSSEKNRELPALPSPSPVLDLAKLAMKNE 138
           SFYYSQVASTVRWL +A  T LTNRL   ++  S+      ALP   P    + L     
Sbjct: 601 SFYYSQVASTVRWLSSADYTGLTNRLGTVNSSLSD-----DALPETEPPAARSPLVEGPT 660

Query: 139 EFCSS----NLVLETSATNVAERKASPAVSLPSIPSFSEFVNGIKEEANQSNKSHGHSLD 198
           E  SS    ++  ETS        ASP++ LP IPSFS+F+N  K + N+S+ S   S +
Sbjct: 661 EITSSDFHDSVRSETSVAVSPTEIASPSIRLPPIPSFSQFINTRKTKDNRSSASEKKSPN 720

Query: 199 RDEKDPVKKARL 207
             +K+  K+ RL
Sbjct: 721 GVQKNLEKRMRL 727

The following BLAST results are available for this feature:

BLAST of CsGy2G000120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141074.1	2.6e-97	100.00	PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X1 [Cucumis sativus]	[more]
KGN60500.1	2.6e-97	100.00	hypothetical protein Csa_2G00090 [Cucumis sativus]	[more]
XP_008459885.1	3.1e-90	94.15	PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X1 [Cucumis melo]	[more]
XP_022937724.1	5.8e-57	68.06	ATP-dependent DNA helicase Q-like 3 isoform X2 [Cucurbita moschata]	[more]
XP_022937726.1	6.4e-56	68.23	ATP-dependent DNA helicase Q-like 3 isoform X4 [Cucurbita moschata]	[more]

BLAST of CsGy2G000120 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G35740.1	3.1e-20	38.02	DEAD/DEAH box RNA helicase family protein	[more]

BLAST of CsGy2G000120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FT72\|RQL3_ARATH	5.6e-19	38.02	ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana OX=3702 GN=RECQL3 PE...	[more]

BLAST of CsGy2G000120 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LES3\|A0A0A0LES3_CUCSA	1.7e-97	100.00	ATP-dependent DNA helicase OS=Cucumis sativus OX=3659 GN=Csa_2G00090 PE=3 SV=1	[more]
tr\|A0A1S3CBB1\|A0A1S3CBB1_CUCME	2.0e-90	94.15	ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103498866 PE=3 SV=1	[more]
tr\|A0A251NGV2\|A0A251NGV2_PRUPE	9.6e-32	47.92	ATP-dependent DNA helicase OS=Prunus persica OX=3760 GN=PRUPE_7G196400 PE=3 SV=1	[more]
tr\|M5VWJ6\|M5VWJ6_PRUPE	9.6e-32	47.92	ATP-dependent DNA helicase OS=Prunus persica OX=3760 GN=PRUPE_ppa002026mg PE=3 S...	[more]
tr\|A0A251NE02\|A0A251NE02_PRUPE	9.6e-32	47.92	ATP-dependent DNA helicase OS=Prunus persica OX=3760 GN=PRUPE_7G196400 PE=3 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006310	DNA recombination
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G000120.1	CsGy2G000120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 37..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..207

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G000120	Cucurbita pepo (Zucchini)	cgybcpeB168
CsGy2G000120	Cucurbita maxima (Rimu)	cgybcmaB185
CsGy2G000120	Cucurbita maxima (Rimu)	cgybcmaB257
CsGy2G000120	Cucurbita moschata (Rifu)	cgybcmoB178
CsGy2G000120	Cucurbita moschata (Rifu)	cgybcmoB243
CsGy2G000120	Cucurbita pepo (Zucchini)	cgybcpeB225
CsGy2G000120	Cucumber (Chinese Long) v2	cgybcuB056
CsGy2G000120	Bottle gourd (USVL1VR-Ls)	cgyblsiB089
CsGy2G000120	Melon (DHL92) v3.5.1	cgybmeB121
CsGy2G000120	Melon (DHL92) v3.6.1	cgybmedB119
CsGy2G000120	Watermelon (Charleston Gray)	cgybwcgB094
CsGy2G000120	Watermelon (97103) v1	cgybwmB154
CsGy2G000120	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G000120	Silver-seed gourd	carcgybB0573
CsGy2G000120	Silver-seed gourd	carcgybB0887
CsGy2G000120	Cucumber (Chinese Long) v3	cgybcucB064
CsGy2G000120	Watermelon (97103) v2	cgybwmbB098
CsGy2G000120	Wax gourd	cgybwgoB125