CsGy1G033200 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G033200
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionProtein TAPETUM DETERMINANT 1
LocationChr1 : 33029006 .. 33029535 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGTTGTTGCAACTTCTTCTTTCTTTCGAGCTTCTGCTCTTTTGTTCCATCTCCTTTTACTTTCTTCCTTCGTTTCTACCCAAGGTAAACATTCTTCTACATCACCTTTTTCTTTCTTTTTTCTTTTTACATCCTATTAACCAACTTAAAAAACACTATTTGAAGCAGTAAGAAGAATAATTAAACCTTTTTATATGTTTGGAAATTATATGAATTAGGTGGAACATGCCAAACAAATTCGATAGCAATCAACCAAGCACAAGGGAAAAGAATGTTCAACGGAATCCCAACATATAGAGTGCAGATAACAAACCAATGTTTGGACAATTGCATTATATATGATCTCCATCTCAAATGTGGATCCTTTTCTTCTTCTGCCTTGATAAATCCCCGCATCTTCAAGAGACTTGCTGTTGATGATTGTCTTGTCAAGAATGGATCACCAATTGTCTTTGGTGAAACTATTTCATTTGAATATTCTACTACCTTTATGTTTCCTCTTTCCGTTTCTTCTCTCAAATGTTAA

mRNA sequence

ATGGGTGTTGTTGCAACTTCTTCTTTCTTTCGAGCTTCTGCTCTTTTGTTCCATCTCCTTTTACTTTCTTCCTTCGTTTCTACCCAAGGTGGAACATGCCAAACAAATTCGATAGCAATCAACCAAGCACAAGGGAAAAGAATGTTCAACGGAATCCCAACATATAGAGTGCAGATAACAAACCAATGTTTGGACAATTGCATTATATATGATCTCCATCTCAAATGTGGATCCTTTTCTTCTTCTGCCTTGATAAATCCCCGCATCTTCAAGAGACTTGCTGTTGATGATTGTCTTGTCAAGAATGGATCACCAATTGTCTTTGGTGAAACTATTTCATTTGAATATTCTACTACCTTTATGTTTCCTCTTTCCGTTTCTTCTCTCAAATGTTAA

Coding sequence (CDS)

ATGGGTGTTGTTGCAACTTCTTCTTTCTTTCGAGCTTCTGCTCTTTTGTTCCATCTCCTTTTACTTTCTTCCTTCGTTTCTACCCAAGGTGGAACATGCCAAACAAATTCGATAGCAATCAACCAAGCACAAGGGAAAAGAATGTTCAACGGAATCCCAACATATAGAGTGCAGATAACAAACCAATGTTTGGACAATTGCATTATATATGATCTCCATCTCAAATGTGGATCCTTTTCTTCTTCTGCCTTGATAAATCCCCGCATCTTCAAGAGACTTGCTGTTGATGATTGTCTTGTCAAGAATGGATCACCAATTGTCTTTGGTGAAACTATTTCATTTGAATATTCTACTACCTTTATGTTTCCTCTTTCCGTTTCTTCTCTCAAATGTTAA

Protein sequence

MGVVATSSFFRASALLFHLLLLSSFVSTQGGTCQTNSIAINQAQGKRMFNGIPTYRVQITNQCLDNCIIYDLHLKCGSFSSSALINPRIFKRLAVDDCLVKNGSPIVFGETISFEYSTTFMFPLSVSSLKC
Homology
[Close]
BLAST of CsGy1G033200 vs. NCBI nr
Match: XP_010535235.1 (PREDICTED: protein TAPETUM DETERMINANT 1-like [Tarenaya hassleriana] >XP_010535236.1 PREDICTED: protein TAPETUM DETERMINANT 1-like [Tarenaya hassleriana])

HSP 1 Score: 135.2 bits (339), Expect = 1.6e-28
Identity = 58/102 (56.86%), Postives = 79/102 (77.45%), Query Frame = 0 

Query: 30  GGTCQTNSIAINQAQGKRMFNGIPTYRVQITNQCLDNCIIYDLHLKCGSFSSSALINPRI 89
           GG C+ N+I I+Q   + + NGIPT+RV+ITNQC+  C I D+HL CG FSS+ LI P +
Sbjct: 27  GGRCRKNNIVISQESTQPLPNGIPTFRVEITNQCVTGCSISDIHLNCGWFSSATLIRPNV 86

Query: 90  FKRLAVDDCLVKNGSPIVFGETISFEYSTTFMFPLSVSSLKC 132
           FKRL+ +DCLV  G P+ FG T+SF+Y+T+F+FPLSVSS++C
Sbjct: 87  FKRLSYNDCLVNGGQPLEFGHTVSFQYATSFLFPLSVSSVQC 128

[Close]
BLAST of CsGy1G033200 vs. NCBI nr
Match: XP_015579392.1 (protein TAPETUM DETERMINANT 1-like [Ricinus communis])

HSP 1 Score: 131.0 bits (328), Expect = 3.0e-27
Identity = 59/102 (57.84%), Postives = 75/102 (73.53%), Query Frame = 0 

Query: 30  GGTCQTNSIAINQAQGKRMFNGIPTYRVQITNQCLDNCIIYDLHLKCGSFSSSALINPRI 89
           G +C +  I INQ     + NGIPTY VQITN C+  C I  +H++CG FSS+ LINP+I
Sbjct: 75  GESCTSADIVINQGSTTSLPNGIPTYTVQITNICVTGCDISGIHIRCGWFSSARLINPKI 134

Query: 90  FKRLAVDDCLVKNGSPIVFGETISFEYSTTFMFPLSVSSLKC 132
           FKRL  DDCLV NG P+++G TISFEYS T+++PLSVSS+ C
Sbjct: 135 FKRLRYDDCLVNNGKPLIYGGTISFEYSNTYLYPLSVSSVLC 176

[Close]
BLAST of CsGy1G033200 vs. NCBI nr
Match: ESQ54814.1 (hypothetical protein EUTSA_v10027160mg, partial [Eutrema salsugineum])

HSP 1 Score: 125.6 bits (314), Expect = 1.3e-25
Identity = 55/102 (53.92%), Postives = 73/102 (71.57%), Query Frame = 0 

Query: 30  GGTCQTNSIAINQAQGKRMFNGIPTYRVQITNQCLDNCIIYDLHLKCGSFSSSALINPRI 89
           G  C+ + I +NQ   + M NGIP YRV+ITNQC+  C I  +H+ CG FSS+ LINPR+
Sbjct: 13  GEKCKGSDIVVNQVATEPMPNGIPGYRVEITNQCMSGCKISRIHISCGWFSSAKLINPRL 72

Query: 90  FKRLAVDDCLVKNGSPIVFGETISFEYSTTFMFPLSVSSLKC 132
           FKR+  DDCLV NG P+ +G T+SF+Y+ TF +PLSVS + C
Sbjct: 73  FKRIHYDDCLVNNGKPLPYGSTLSFQYANTFPYPLSVSFVTC 114

[Close]
BLAST of CsGy1G033200 vs. NCBI nr
Match: XP_024005303.1 (protein TAPETUM DETERMINANT 1 isoform X2 [Eutrema salsugineum])

HSP 1 Score: 125.6 bits (314), Expect = 1.3e-25
Identity = 55/102 (53.92%), Postives = 73/102 (71.57%), Query Frame = 0 

Query: 30  GGTCQTNSIAINQAQGKRMFNGIPTYRVQITNQCLDNCIIYDLHLKCGSFSSSALINPRI 89
           G  C+ + I +NQ   + M NGIP YRV+ITNQC+  C I  +H+ CG FSS+ LINPR+
Sbjct: 73  GEKCKGSDIVVNQVATEPMPNGIPGYRVEITNQCMSGCKISRIHISCGWFSSAKLINPRL 132

Query: 90  FKRLAVDDCLVKNGSPIVFGETISFEYSTTFMFPLSVSSLKC 132
           FKR+  DDCLV NG P+ +G T+SF+Y+ TF +PLSVS + C
Sbjct: 133 FKRIHYDDCLVNNGKPLPYGSTLSFQYANTFPYPLSVSFVTC 174

[Close]
BLAST of CsGy1G033200 vs. NCBI nr
Match: XP_006413361.2 (protein TAPETUM DETERMINANT 1 isoform X1 [Eutrema salsugineum] >XP_024005302.1 protein TAPETUM DETERMINANT 1 isoform X1 [Eutrema salsugineum])

HSP 1 Score: 125.6 bits (314), Expect = 1.3e-25
Identity = 55/102 (53.92%), Postives = 73/102 (71.57%), Query Frame = 0 

Query: 30  GGTCQTNSIAINQAQGKRMFNGIPTYRVQITNQCLDNCIIYDLHLKCGSFSSSALINPRI 89
           G  C+ + I +NQ   + M NGIP YRV+ITNQC+  C I  +H+ CG FSS+ LINPR+
Sbjct: 75  GEKCKGSDIVVNQVATEPMPNGIPGYRVEITNQCMSGCKISRIHISCGWFSSAKLINPRL 134

Query: 90  FKRLAVDDCLVKNGSPIVFGETISFEYSTTFMFPLSVSSLKC 132
           FKR+  DDCLV NG P+ +G T+SF+Y+ TF +PLSVS + C
Sbjct: 135 FKRIHYDDCLVNNGKPLPYGSTLSFQYANTFPYPLSVSFVTC 176

[Close]
BLAST of CsGy1G033200 vs. TAIR10
Match: AT4G24972.1 (tapetum determinant 1)

HSP 1 Score: 124.0 bits (310), Expect = 6.7e-29
Identity = 55/102 (53.92%), Postives = 72/102 (70.59%), Query Frame = 0 

Query: 30  GGTCQTNSIAINQAQGKRMFNGIPTYRVQITNQCLDNCIIYDLHLKCGSFSSSALINPRI 89
           G  C++  I +NQA  + M NGIP Y V+ITNQC+  CII  +H+ CG FSS+ LINPR+
Sbjct: 74  GEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSAKLINPRV 133

Query: 90  FKRLAVDDCLVKNGSPIVFGETISFEYSTTFMFPLSVSSLKC 132
           FKR+  DDCLV NG P+ FG T+SF Y+ TF + LSV+ + C
Sbjct: 134 FKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFVTC 175

[Close]
BLAST of CsGy1G033200 vs. TAIR10
Match: AT1G32583.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 106.7 bits (265), Expect = 1.1e-23
Identity = 44/102 (43.14%), Postives = 70/102 (68.63%), Query Frame = 0 

Query: 30  GGTCQTNSIAINQAQGKRMFNGIPTYRVQITNQCLDNCIIYDLHLKCGSFSSSALINPRI 89
           G  C  + I + Q     + +G+P+Y V+I N C+ +C I ++H+ CG FSS  L+NPR+
Sbjct: 77  GQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRV 136

Query: 90  FKRLAVDDCLVKNGSPIVFGETISFEYSTTFMFPLSVSSLKC 132
           F+RL  DDCLV +G P+  G+++SF+Y+ +F +PLSV+S+ C
Sbjct: 137 FRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVASVSC 178

[Close]
BLAST of CsGy1G033200 vs. TAIR10
Match: AT4G32110.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.1e-07
Identity = 35/111 (31.53%), Postives = 56/111 (50.45%), Query Frame = 0 

Query: 16  LFHLLLLSSFVSTQGGTCQTNSIAINQAQGKRMFNGIPTYRVQITNQCLDNCIIYDLHLK 75
           L  L+L  +FV+   G C  NS+++ Q++  ++    P + V++TN C +NC   +  L 
Sbjct: 8   LLCLVLFLAFVNQGYGDCSLNSLSVKQSKTGKLVQNKPEWEVRVTNPC-NNCKFQNTELL 67

Query: 76  CGSFSSSALINPRIFKRLAVDDCLVKNGSPIVFGETISFEYSTTFMFPLSV 127
           C  F+S   I+  +  + + D CLV  G  IV    I F+Y     F L V
Sbjct: 68  CVGFNSVTPIDTSLLLK-SGDACLVNAGKFIVPHVDIVFKYVWDTSFDLKV 116

[Close]
BLAST of CsGy1G033200 vs. TAIR10
Match: AT1G05835.1 (PHD finger protein)

HSP 1 Score: 48.5 bits (114), Expect = 3.6e-06
Identity = 38/118 (32.20%), Postives = 61/118 (51.69%), Query Frame = 0 

Query: 9   FFRASALLFHLLLLSSFVSTQGGTCQTNSIAINQAQGKRMFNGIPTYRVQITNQCLDNCI 68
           F   S+L   LL + S    +G   +++  A+ Q Q K  +     +RV++ N+C   C 
Sbjct: 7   FLLWSSLALLLLQIGSGAICEG---KSSEPAVRQTQVK--WREGKKFRVEVMNKC-PMCP 66

Query: 69  IYDLHLKCGSFSSSALINPRIFKRL--AVDDCLVKNGSPIVFGETISFEYSTTFMFPL 125
           I +L LKC  F  S L++P   + L  +  +C+V +G P+   +T+SF YS T  F L
Sbjct: 67  IINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSFNYSNTHQFAL 117

[Close]
BLAST of CsGy1G033200 vs. TAIR10
Match: AT4G32105.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein)

HSP 1 Score: 43.5 bits (101), Expect = 1.2e-04
Identity = 29/108 (26.85%), Postives = 49/108 (45.37%), Query Frame = 0 

Query: 19  LLLLSSFVSTQGGTCQTNSIAINQAQGKRMFNGIPTYRVQITNQCLDNCIIYDLHLKCGS 78
           L+L  +FV+   G C  N +++ Q++  ++    P + V++TN C +NC      L C  
Sbjct: 11  LVLFLAFVNQGYGDCHLNYLSVKQSKTGKLVQNKPEWEVRVTNPC-NNCKFQYTKLSCVG 70

Query: 79  FSSSALINPRIFKRLAVDDCLVKNGSPIVFGETISFEYSTTFMFPLSV 127
           F S   +   +  + + D CL+  G+ I       F Y     F L V
Sbjct: 71  FQSVTPVATSLLSK-SGDICLLNAGNFIFPHVDFVFNYVWDTSFDLKV 116

[Close]
BLAST of CsGy1G033200 vs. Swiss-Prot
Match: sp|Q6TLJ2|TPD1_ARATH (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-27
Identity = 55/102 (53.92%), Postives = 72/102 (70.59%), Query Frame = 0 

Query: 30  GGTCQTNSIAINQAQGKRMFNGIPTYRVQITNQCLDNCIIYDLHLKCGSFSSSALINPRI 89
           G  C++  I +NQA  + M NGIP Y V+ITNQC+  CII  +H+ CG FSS+ LINPR+
Sbjct: 74  GEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSAKLINPRV 133

Query: 90  FKRLAVDDCLVKNGSPIVFGETISFEYSTTFMFPLSVSSLKC 132
           FKR+  DDCLV NG P+ FG T+SF Y+ TF + LSV+ + C
Sbjct: 134 FKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFVTC 175

[Close]
BLAST of CsGy1G033200 vs. Swiss-Prot
Match: sp|Q1G3T1|TDL1_ARATH (TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.0e-22
Identity = 44/102 (43.14%), Postives = 70/102 (68.63%), Query Frame = 0 

Query: 30  GGTCQTNSIAINQAQGKRMFNGIPTYRVQITNQCLDNCIIYDLHLKCGSFSSSALINPRI 89
           G  C  + I + Q     + +G+P+Y V+I N C+ +C I ++H+ CG FSS  L+NPR+
Sbjct: 77  GQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRV 136

Query: 90  FKRLAVDDCLVKNGSPIVFGETISFEYSTTFMFPLSVSSLKC 132
           F+RL  DDCLV +G P+  G+++SF+Y+ +F +PLSV+S+ C
Sbjct: 137 FRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVASVSC 178

[Close]
BLAST of CsGy1G033200 vs. Swiss-Prot
Match: sp|Q2QR54|TDL1A_ORYSJ (TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-19
Identity = 44/107 (41.12%), Postives = 68/107 (63.55%), Query Frame = 0 

Query: 31  GTCQTNSIAINQAQGKRMFNGIPTYRVQITNQCL------DNCIIYDLHLKCGSFSSSAL 90
           G    + IAI Q +   + +G+P Y V + N+C       + C I  +H++CG FSS +L
Sbjct: 113 GCAGADDIAIYQGRATPLPSGVPAYTVDVMNRCAGXXXXDEECAIAGIHVRCGWFSSVSL 172

Query: 91  INPRIFKRLAVDDCLVKNGSPIVFGETISFEYSTTFMFPLSVSSLKC 132
           ++PR+F+RL  DDCL+ +G P++ GET+SFEY+ +F + LSVS   C
Sbjct: 173 VDPRVFRRLGHDDCLLNDGRPLLAGETVSFEYTNSFPYKLSVSVATC 219

[Close]
BLAST of CsGy1G033200 vs. Swiss-Prot
Match: sp|Q8S6P9|TDL1B_ORYSJ (TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.7e-19
Identity = 40/103 (38.83%), Postives = 67/103 (65.05%), Query Frame = 0 

Query: 29  QGGTCQTNSIAINQAQGKRMFNGIPTYRVQITNQCLDNCIIYDLHLKCGSFSSSALINPR 88
           Q  +C   ++ + Q   + + +GIPTY V+I N C   C +YD+H+ CG F+S+ L++P 
Sbjct: 67  QPDSCSEQNVVVYQNNAEHLPSGIPTYSVEIINVC-TACTVYDVHISCGEFASAELVDPS 126

Query: 89  IFKRLAVDDCLVKNGSPIVFGETISFEYSTTFMFPLSVSSLKC 132
            F+R+  +DCLVK G  +   E +SF+YS +F +PL+V+++ C
Sbjct: 127 QFQRIGFNDCLVKGGGRLGPSEAVSFQYSNSFAYPLAVANVAC 168

[Close]
BLAST of CsGy1G033200 vs. Swiss-Prot
Match: sp|A8MS78|Y1583_ARATH (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 6.5e-05
Identity = 38/118 (32.20%), Postives = 61/118 (51.69%), Query Frame = 0 

Query: 9   FFRASALLFHLLLLSSFVSTQGGTCQTNSIAINQAQGKRMFNGIPTYRVQITNQCLDNCI 68
           F   S+L   LL + S    +G   +++  A+ Q Q K  +     +RV++ N+C   C 
Sbjct: 7   FLLWSSLALLLLQIGSGAICEG---KSSEPAVRQTQVK--WREGKKFRVEVMNKC-PMCP 66

Query: 69  IYDLHLKCGSFSSSALINPRIFKRL--AVDDCLVKNGSPIVFGETISFEYSTTFMFPL 125
           I +L LKC  F  S L++P   + L  +  +C+V +G P+   +T+SF YS T  F L
Sbjct: 67  IINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSFNYSNTHQFAL 117

[Close]
BLAST of CsGy1G033200 vs. TrEMBL
Match: tr|V4MEA8|V4MEA8_EUTSA (Uncharacterized protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10027160mg PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 8.5e-26
Identity = 55/102 (53.92%), Postives = 73/102 (71.57%), Query Frame = 0 

Query: 30  GGTCQTNSIAINQAQGKRMFNGIPTYRVQITNQCLDNCIIYDLHLKCGSFSSSALINPRI 89
           G  C+ + I +NQ   + M NGIP YRV+ITNQC+  C I  +H+ CG FSS+ LINPR+
Sbjct: 13  GEKCKGSDIVVNQVATEPMPNGIPGYRVEITNQCMSGCKISRIHISCGWFSSAKLINPRL 72

Query: 90  FKRLAVDDCLVKNGSPIVFGETISFEYSTTFMFPLSVSSLKC 132
           FKR+  DDCLV NG P+ +G T+SF+Y+ TF +PLSVS + C
Sbjct: 73  FKRIHYDDCLVNNGKPLPYGSTLSFQYANTFPYPLSVSFVTC 114

[Close]
BLAST of CsGy1G033200 vs. TrEMBL
Match: tr|A0A2K3JL65|A0A2K3JL65_TRIPR (Tapetum determinant protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g012497 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-25
Identity = 55/102 (53.92%), Postives = 75/102 (73.53%), Query Frame = 0 

Query: 30  GGTCQTNSIAINQAQGKRMFNGIPTYRVQITNQCLDNCIIYDLHLKCGSFSSSALINPRI 89
           G  C  + I I+QA    + NGIPTYRV+I+N C+  C I  +HL+CG FSS+ LINP++
Sbjct: 13  GDNCTKSDIVISQASTAPLPNGIPTYRVEISNMCVSGCDISAIHLRCGWFSSARLINPKL 72

Query: 90  FKRLAVDDCLVKNGSPIVFGETISFEYSTTFMFPLSVSSLKC 132
           FKRL  +DCLV NG P+V G T+SF+Y+ T+++PLSVSS+ C
Sbjct: 73  FKRLRYNDCLVNNGKPVVNGGTVSFQYANTYLYPLSVSSVVC 114

[Close]
BLAST of CsGy1G033200 vs. TrEMBL
Match: tr|A0A2K3M8A3|A0A2K3M8A3_TRIPR (Tapetum determinant protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g043062 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-25
Identity = 55/102 (53.92%), Postives = 75/102 (73.53%), Query Frame = 0 

Query: 30  GGTCQTNSIAINQAQGKRMFNGIPTYRVQITNQCLDNCIIYDLHLKCGSFSSSALINPRI 89
           G  C  + I I+QA    + NGIPTYRV+I+N C+  C I  +HL+CG FSS+ LINP++
Sbjct: 12  GDNCTKSDIVISQASTAPLPNGIPTYRVEISNMCVSGCDISAIHLRCGWFSSARLINPKL 71

Query: 90  FKRLAVDDCLVKNGSPIVFGETISFEYSTTFMFPLSVSSLKC 132
           FKRL  +DCLV NG P+V G T+SF+Y+ T+++PLSVSS+ C
Sbjct: 72  FKRLRYNDCLVNNGKPVVNGGTVSFQYANTYLYPLSVSSVVC 113

[Close]
BLAST of CsGy1G033200 vs. TrEMBL
Match: tr|A0A1J3EQ76|A0A1J3EQ76_NOCCA (Uncharacterized protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA_TR10214_c0_g1_i1_g.33666 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-25
Identity = 55/102 (53.92%), Postives = 72/102 (70.59%), Query Frame = 0 

Query: 30  GGTCQTNSIAINQAQGKRMFNGIPTYRVQITNQCLDNCIIYDLHLKCGSFSSSALINPRI 89
           G  C+ + I +NQA  + M NGIP Y V+ITNQC+  C I  +H+ CG FSS+ LINPR+
Sbjct: 137 GEKCKRSDIVVNQAATEPMPNGIPGYTVEITNQCMSGCKISRIHVSCGWFSSAKLINPRV 196

Query: 90  FKRLAVDDCLVKNGSPIVFGETISFEYSTTFMFPLSVSSLKC 132
           FKR+  DDCLV NG P+ +G T+SF Y+ TF +PLSVS + C
Sbjct: 197 FKRIHYDDCLVNNGKPLPYGSTLSFHYANTFPYPLSVSFVTC 238

[Close]
BLAST of CsGy1G033200 vs. TrEMBL
Match: tr|A0A1J3GVG9|A0A1J3GVG9_NOCCA (Uncharacterized protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=LE_TR17747_c0_g1_i1_g.57233 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-25
Identity = 55/102 (53.92%), Postives = 72/102 (70.59%), Query Frame = 0 

Query: 30  GGTCQTNSIAINQAQGKRMFNGIPTYRVQITNQCLDNCIIYDLHLKCGSFSSSALINPRI 89
           G  C+ + I +NQA  + M NGIP Y V+ITNQC+  C I  +H+ CG FSS+ LINPR+
Sbjct: 120 GEKCKRSDIVVNQAATEPMPNGIPGYTVEITNQCMSGCKISRIHVSCGWFSSAKLINPRV 179

Query: 90  FKRLAVDDCLVKNGSPIVFGETISFEYSTTFMFPLSVSSLKC 132
           FKR+  DDCLV NG P+ +G T+SF Y+ TF +PLSVS + C
Sbjct: 180 FKRIHYDDCLVNNGKPLPYGSTLSFHYANTFPYPLSVSFVTC 221

The following BLAST results are available for this feature:
BLAST of CsGy1G033200 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_010535235.11.6e-2856.86PREDICTED: protein TAPETUM DETERMINANT 1-like [Tarenaya hassleriana] >XP_0105352... [more]
XP_015579392.13.0e-2757.84protein TAPETUM DETERMINANT 1-like [Ricinus communis][more]
ESQ54814.11.3e-2553.92hypothetical protein EUTSA_v10027160mg, partial [Eutrema salsugineum][more]
XP_024005303.11.3e-2553.92protein TAPETUM DETERMINANT 1 isoform X2 [Eutrema salsugineum][more]
XP_006413361.21.3e-2553.92protein TAPETUM DETERMINANT 1 isoform X1 [Eutrema salsugineum] >XP_024005302.1 p... [more]
BLAST of CsGy1G033200 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G24972.16.7e-2953.92tapetum determinant 1[more]
AT1G32583.11.1e-2343.14FUNCTIONS IN: molecular_function unknown[more]
AT4G32110.11.1e-0731.53Beta-1,3-N-Acetylglucosaminyltransferase family protein[more]
AT1G05835.13.6e-0632.20PHD finger protein[more]
AT4G32105.11.2e-0426.85Beta-1,3-N-Acetylglucosaminyltransferase family protein[more]
BLAST of CsGy1G033200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q6TLJ2|TPD1_ARATH1.2e-2753.92Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1[more]
sp|Q1G3T1|TDL1_ARATH2.0e-2243.14TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1[more]
sp|Q2QR54|TDL1A_ORYSJ1.2e-1941.12TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 S... [more]
sp|Q8S6P9|TDL1B_ORYSJ2.7e-1938.83TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 S... [more]
sp|A8MS78|Y1583_ARATH6.5e-0532.20Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 P... [more]
BLAST of CsGy1G033200 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|V4MEA8|V4MEA8_EUTSA8.5e-2653.92Uncharacterized protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v100... [more]
tr|A0A2K3JL65|A0A2K3JL65_TRIPR1.1e-2553.92Tapetum determinant protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g0... [more]
tr|A0A2K3M8A3|A0A2K3M8A3_TRIPR1.1e-2553.92Tapetum determinant protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g0... [more]
tr|A0A1J3EQ76|A0A1J3EQ76_NOCCA1.9e-2553.92Uncharacterized protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA_TR102... [more]
tr|A0A1J3GVG9|A0A1J3GVG9_NOCCA1.9e-2553.92Uncharacterized protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=LE_TR177... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048653 anther development
biological_process GO:0001709 cell fate determination
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G033200.1CsGy1G033200.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33184FAMILY NOT NAMEDcoord: 30..131
NoneNo IPR availablePANTHERPTHR33184:SF2PROTEIN TAPETUM DETERMINANT 1coord: 30..131

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G033200Cucurbita maxima (Rimu)cgybcmaB065
CsGy1G033200Cucurbita maxima (Rimu)cgybcmaB079
CsGy1G033200Cucurbita maxima (Rimu)cgybcmaB090
CsGy1G033200Cucurbita maxima (Rimu)cgybcmaB096
CsGy1G033200Cucurbita moschata (Rifu)cgybcmoB061
CsGy1G033200Cucurbita moschata (Rifu)cgybcmoB073
CsGy1G033200Cucurbita moschata (Rifu)cgybcmoB090
CsGy1G033200Cucurbita moschata (Rifu)cgybcmoB087
CsGy1G033200Cucurbita pepo (Zucchini)cgybcpeB008
CsGy1G033200Cucurbita pepo (Zucchini)cgybcpeB021
CsGy1G033200Cucurbita pepo (Zucchini)cgybcpeB074
CsGy1G033200Cucurbita pepo (Zucchini)cgybcpeB083
CsGy1G033200Cucumber (Chinese Long) v2cgybcuB002
CsGy1G033200Bottle gourd (USVL1VR-Ls)cgyblsiB022
CsGy1G033200Bottle gourd (USVL1VR-Ls)cgyblsiB030
CsGy1G033200Melon (DHL92) v3.5.1cgybmeB012
CsGy1G033200Melon (DHL92) v3.5.1cgybmeB031
CsGy1G033200Melon (DHL92) v3.5.1cgybmeB032
CsGy1G033200Melon (DHL92) v3.6.1cgybmedB011
CsGy1G033200Melon (DHL92) v3.6.1cgybmedB028
CsGy1G033200Melon (DHL92) v3.6.1cgybmedB029
CsGy1G033200Watermelon (Charleston Gray)cgybwcgB017
CsGy1G033200Watermelon (Charleston Gray)cgybwcgB022
CsGy1G033200Watermelon (97103) v1cgybwmB058
CsGy1G033200Wild cucumber (PI 183967)cgybcpiB002
CsGy1G033200Silver-seed gourdcarcgybB0403
CsGy1G033200Silver-seed gourdcarcgybB0406
CsGy1G033200Silver-seed gourdcarcgybB0459
CsGy1G033200Cucumber (Chinese Long) v3cgybcucB001
CsGy1G033200Watermelon (97103) v2cgybwmbB004
CsGy1G033200Watermelon (97103) v2cgybwmbB011
CsGy1G033200Wax gourdcgybwgoB028
CsGy1G033200Wax gourdcgybwgoB053