CsGy1G031870 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G031870
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	ATP-dependent zinc metalloprotease FtsH
Location	Chr1 : 30915968 .. 30917827 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGTGAACCTTCCTCATTAACAGTATTGGATATCAAAGTTTATTTTATGTGTTAATCAAAACATATACTTGTTTGTGGTGTCCAGTATATATGGTGATATTGTTAGATACCTAGATTAATATAGGGTAGGGGTATAAAGGTTATTAGATTTGTTGGTAGTTAGTTGGTTACAAATAGGAAGTTGAGGAGGGAAGAAAGGCATGAAGTATTTTGGTGAAGATATTGGGCTGCAACATTCCTTGAAAGAAAGGAAGGGTAGAGGGTTAGAGTTCTATTGATATGTCTTGAGTTCCTTTGATTACTTTGTATTTCTTAGTTTGGTATCAATAAATTCGAACACATTCTGGTGTTCCAACAGATATTTGACAGTTCCTTCGTGTATTATATTTAACGTACTGGCTTTTAACATGTTTCCAATAAGCATGCACACCATAATCTTGTAAGCATTAGTTTTACCATTTTAATATGAACTAATTAAATGAAGTCTATTCTCTAGTGGACAAGGGAGACAAAGTTTCCACATGCTGTTTGGGCAGCTGGTCGTGGTCTTATTGCCCTTCTATTACCGAATTTTGATGTCGTGGATAATTTGTGGCTTGAGCCATTGTCTTGGCAGGTTAGACATTTTCCTACCCAAAAGCTTGAACAAGTTCTTCTGCATAAAAAGTTTTGGTTTTCAGTGGTAATAAAGAGATATGTGGTATTCTGCTTGTATGGTTACATCAGCCATACATTTTTGGGTAAAACGCCTCTGTCTTATATTGTAATACAATTATTGCTTCTTATTATTTTTCGGTTACAATGATTAATAAATGTATCGATAATCAAAAAAATTTCATAAACAGGGATAACAATAAGATATTCCCCACCTGAAATTTACCATACCAACTAATATGTAACAAAGAAGTATTTTTCAACCTACTGGTATAGGATGACCTCATATGGTCTACAGTTCATTTGATCGTGTGAACAATTGTTTTTATAAAAATTGTATCAACTTAAAGTTTTTTATACTACTTGCGTAGAATATTTATAGAATATAAAATACGTGGGAGAAGAAGATGGTGATTATTATTATACTTTTTTGAGGACAGAAAGGAAAAATTGAAAGCCTGTGGAAGATCGCTTGTCTAGAATACATTAGACAAAAGTAATAGTAAATTTCAAAGAGAGGGAAAGCACTGATTGCTTTCTGGTTGGAAGTTCAAAGCATGTTATGGCTACCATCCGGCTAGAATATTAAAATATTCGATAAACTTGGCATGATATGGTGTTTGAGATCTACTTTCTCATTAGTTTACTTTCAATCAATTGGCTCGTGCACTTACAGTTATTAATATTACAAAAGAAAAAAGAAAAGAACTCTAGGCAAATATGCACTATCTTGGAGAATTGTGTTTGAGCTTTGAAGACACCATGGTGATTTTATTGTGTTTGAACTTGTGCCTCTTTTGTAGGGTATTGGATGTACAAAGATCAGTAAGCGAAGAGACAAAGGATCCATTAATGGGAATTCAGAATCAAGATCGTACCTAGAAAAGAAGCTTGTTTTTTGCTTTGGTTCATATATAGCAGCTAAAATGCTGCTTCCTTTTGGAGAAGAAAATTTCCTATCTTCGTATGAGTTAAAGCAGGCACAAGAGGTTAGTTTCAGAGAGCTCTCTTGGAATATTTGTCAGTCATCTTATAAGCTACCTAATTTTTGTTCATAACACACTGTACTAAATCTCTTCTGTGGTAGATTGCAACAAGAATGGTGCTTCAGTATGGCTGGGGACCAGATGATAGTCCAGCAATTTACAGCCGAAACAATGCAGTATATTTCTTTCTTTCACATCCAAAACTTATTGTGTGA

mRNA sequence

ATGGAAAGTGAACCTTCCTCATTAACAGTATTGGATATCAAATGGACAAGGGAGACAAAGTTTCCACATGCTGTTTGGGCAGCTGGTCGTGGTCTTATTGCCCTTCTATTACCGAATTTTGATGTCGTGGATAATTTGTGGCTTGAGCCATTGTCTTGGCAGGGTATTGGATGTACAAAGATCAGTAAGCGAAGAGACAAAGGATCCATTAATGGGAATTCAGAATCAAGATCGTACCTAGAAAAGAAGCTTGTTTTTTGCTTTGGTTCATATATAGCAGCTAAAATGCTGCTTCCTTTTGGAGAAGAAAATTTCCTATCTTCGTATGAGTTAAAGCAGGCACAAGAGATTGCAACAAGAATGGTGCTTCAGTATGGCTGGGGACCAGATGATAGTCCAGCAATTTACAGCCGAAACAATGCAGTATATTTCTTTCTTTCACATCCAAAACTTATTGTGTGA

Coding sequence (CDS)

ATGGAAAGTGAACCTTCCTCATTAACAGTATTGGATATCAAATGGACAAGGGAGACAAAGTTTCCACATGCTGTTTGGGCAGCTGGTCGTGGTCTTATTGCCCTTCTATTACCGAATTTTGATGTCGTGGATAATTTGTGGCTTGAGCCATTGTCTTGGCAGGGTATTGGATGTACAAAGATCAGTAAGCGAAGAGACAAAGGATCCATTAATGGGAATTCAGAATCAAGATCGTACCTAGAAAAGAAGCTTGTTTTTTGCTTTGGTTCATATATAGCAGCTAAAATGCTGCTTCCTTTTGGAGAAGAAAATTTCCTATCTTCGTATGAGTTAAAGCAGGCACAAGAGATTGCAACAAGAATGGTGCTTCAGTATGGCTGGGGACCAGATGATAGTCCAGCAATTTACAGCCGAAACAATGCAGTATATTTCTTTCTTTCACATCCAAAACTTATTGTGTGA

Protein sequence

MESEPSSLTVLDIKWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRDKGSINGNSESRSYLEKKLVFCFGSYIAAKMLLPFGEENFLSSYELKQAQEIATRMVLQYGWGPDDSPAIYSRNNAVYFFLSHPKLIV

Homology

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BLAST of CsGy1G031870 vs. NCBI nr
Match: KGN66744.1 (Metalloprotease m41 ftsh [Cucumis sativus])

HSP 1 Score: 298.5 bits (763), Expect = 1.3e-77
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MESEPSSLTVLDIKWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTK 60
           MESEPSSLTVLDIKWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTK
Sbjct: 1   MESEPSSLTVLDIKWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTK 60

Query: 61  ISKRRDKGSINGNSESRSYLEKKLVFCFGSYIAAKMLLPFGEENFLSSYELKQAQEIATR 120
           ISKRRDKGSINGNSESRSYLEKKLVFCFGSYIAAKMLLPFGEENFLSSYELKQAQEIATR
Sbjct: 61  ISKRRDKGSINGNSESRSYLEKKLVFCFGSYIAAKMLLPFGEENFLSSYELKQAQEIATR 120

Query: 121 MVLQYGWGPDDSPAIYSRNNAV 143
           MVLQYGWGPDDSPAIYSRNNA+
Sbjct: 121 MVLQYGWGPDDSPAIYSRNNAI 142

[Close]

BLAST of CsGy1G031870 vs. NCBI nr
Match: XP_004142587.1 (PREDICTED: uncharacterized protein LOC101207174 [Cucumis sativus])

HSP 1 Score: 274.6 bits (701), Expect = 2.0e-70
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 13   IKWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRDKGSING 72
            + WTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRDKGSING
Sbjct: 1094 LDWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRDKGSING 1153

Query: 73   NSESRSYLEKKLVFCFGSYIAAKMLLPFGEENFLSSYELKQAQEIATRMVLQYGWGPDDS 132
            NSESRSYLEKKLVFCFGSYIAAKMLLPFGEENFLSSYELKQAQEIATRMVLQYGWGPDDS
Sbjct: 1154 NSESRSYLEKKLVFCFGSYIAAKMLLPFGEENFLSSYELKQAQEIATRMVLQYGWGPDDS 1213

Query: 133  PAIYSRNNAVYF 145
            PAIYSRNNAV F
Sbjct: 1214 PAIYSRNNAVSF 1225

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BLAST of CsGy1G031870 vs. NCBI nr
Match: XP_008443775.1 (PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic [Cucumis melo])

HSP 1 Score: 265.0 bits (676), Expect = 1.6e-67
Identity = 124/132 (93.94%), Postives = 128/132 (96.97%), Query Frame = 0


Query: 13   IKWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRDKGSING 72
            + WTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRD+GSING
Sbjct: 1089 LDWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRDEGSING 1148

Query: 73   NSESRSYLEKKLVFCFGSYIAAKMLLPFGEENFLSSYELKQAQEIATRMVLQYGWGPDDS 132
            NSESRSYLEKKLVFCFGSYIAA+MLLPFGEENFLSS ELKQAQEIATRMV+QYGWGPDDS
Sbjct: 1149 NSESRSYLEKKLVFCFGSYIAAQMLLPFGEENFLSSSELKQAQEIATRMVIQYGWGPDDS 1208

Query: 133  PAIYSRNNAVYF 145
            PAIY RNNAV F
Sbjct: 1209 PAIYCRNNAVGF 1220

[Close]

BLAST of CsGy1G031870 vs. NCBI nr
Match: XP_022158670.1 (probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic [Momordica charantia])

HSP 1 Score: 261.9 bits (668), Expect = 1.3e-66
Identity = 121/130 (93.08%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 13   IKWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRDKGSING 72
            + WTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRR++GSING
Sbjct: 1094 LDWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRNEGSING 1153

Query: 73   NSESRSYLEKKLVFCFGSYIAAKMLLPFGEENFLSSYELKQAQEIATRMVLQYGWGPDDS 132
            NSESRSYLEKKLVFCFGSY+AA+MLLPFGEENFLSS ELKQAQEIATRMV+QYGWGPDDS
Sbjct: 1154 NSESRSYLEKKLVFCFGSYVAAQMLLPFGEENFLSSSELKQAQEIATRMVIQYGWGPDDS 1213

Query: 133  PAIYSRNNAV 143
            PAIY RNNAV
Sbjct: 1214 PAIYCRNNAV 1223

[Close]

BLAST of CsGy1G031870 vs. NCBI nr
Match: XP_022988004.1 (probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 254.6 bits (649), Expect = 2.1e-64
Identity = 117/132 (88.64%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 13   IKWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRDKGSING 72
            + WTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKR+++GSING
Sbjct: 1090 LDWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRKNEGSING 1149

Query: 73   NSESRSYLEKKLVFCFGSYIAAKMLLPFGEENFLSSYELKQAQEIATRMVLQYGWGPDDS 132
            NSESRSYLEKKLVFCFGSY+A++MLLPFGEEN LSS ELKQAQEIATRMV+QYGWGPDD+
Sbjct: 1150 NSESRSYLEKKLVFCFGSYVASQMLLPFGEENLLSSSELKQAQEIATRMVVQYGWGPDDN 1209

Query: 133  PAIYSRNNAVYF 145
            PAIY  NNAV F
Sbjct: 1210 PAIYCTNNAVSF 1221

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BLAST of CsGy1G031870 vs. TAIR10
Match: AT3G04340.1 (FtsH extracellular protease family)

HSP 1 Score: 221.1 bits (562), Expect = 4.7e-58
Identity = 101/130 (77.69%), Postives = 114/130 (87.69%), Query Frame = 0


Query: 13   IKWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRDKGSING 72
            + WTRETKFPHAVWAAGR LI LL+PNFDVV+NLWLEP SW+GIGCTKI+K    GS  G
Sbjct: 1087 VDWTRETKFPHAVWAAGRALITLLIPNFDVVENLWLEPSSWEGIGCTKITKVTSGGSAIG 1146

Query: 73   NSESRSYLEKKLVFCFGSYIAAKMLLPFGEENFLSSYELKQAQEIATRMVLQYGWGPDDS 132
            N+ESRSYLEKKLVFCFGS+IA++MLLP G+ENFLSS E+ +AQEIATRMVLQYGWGPDDS
Sbjct: 1147 NTESRSYLEKKLVFCFGSHIASQMLLPPGDENFLSSSEITKAQEIATRMVLQYGWGPDDS 1206

Query: 133  PAIYSRNNAV 143
            PA+Y   NAV
Sbjct: 1207 PAVYYATNAV 1216

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BLAST of CsGy1G031870 vs. Swiss-Prot
Match: sp|F4J3N2|FTSI5_ARATH (Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FTSHI5 PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 8.5e-57
Identity = 101/130 (77.69%), Postives = 114/130 (87.69%), Query Frame = 0


Query: 13   IKWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRDKGSING 72
            + WTRETKFPHAVWAAGR LI LL+PNFDVV+NLWLEP SW+GIGCTKI+K    GS  G
Sbjct: 1087 VDWTRETKFPHAVWAAGRALITLLIPNFDVVENLWLEPSSWEGIGCTKITKVTSGGSAIG 1146

Query: 73   NSESRSYLEKKLVFCFGSYIAAKMLLPFGEENFLSSYELKQAQEIATRMVLQYGWGPDDS 132
            N+ESRSYLEKKLVFCFGS+IA++MLLP G+ENFLSS E+ +AQEIATRMVLQYGWGPDDS
Sbjct: 1147 NTESRSYLEKKLVFCFGSHIASQMLLPPGDENFLSSSEITKAQEIATRMVLQYGWGPDDS 1206

Query: 133  PAIYSRNNAV 143
            PA+Y   NAV
Sbjct: 1207 PAVYYATNAV 1216

[Close]

BLAST of CsGy1G031870 vs. Swiss-Prot
Match: sp|C8WEG0|FTSH_ZYMMN (ATP-dependent zinc metalloprotease FtsH OS=Zymomonas mobilis subsp. mobilis (strain NCIMB 11163 / B70) OX=622759 GN=ftsH PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.4e-06
Identity = 40/133 (30.08%), Postives = 62/133 (46.62%), Query Frame = 0


Query: 16  TRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRDKGSINGNSE 75
           T E K   A   AG  L++L +P  D +  + + P   + +G T     RD+ SIN    
Sbjct: 431 TEEEKRSTAYHEAGHALVSLHIPGCDPLHKVTVIPRG-RALGVTWNLPERDQLSIN---- 490

Query: 76  SRSYLEKKLVFCFGSYIAAKMLLPFGEENFLSSYELKQAQEIATRMVLQYGWGPDDSPAI 135
               ++ +L  CFG  IA +++      N  +S +++QA ++A  MV +YG  P      
Sbjct: 491 -IKQMKARLALCFGGRIAEQLVYGEDSLNTGASNDIQQATDMARAMVTEYGMSPKLGWLR 550

Query: 136 YSRNNAVYFFLSH 149
           Y R N    FL H
Sbjct: 551 Y-RENQDEVFLGH 556

[Close]

BLAST of CsGy1G031870 vs. Swiss-Prot
Match: sp|Q3JEE4|FTSH_NITOC (ATP-dependent zinc metalloprotease FtsH OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / NCIMB 11848 / C-107) OX=323261 GN=ftsH PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 9.0e-06
Identity = 38/126 (30.16%), Postives = 61/126 (48.41%), Query Frame = 0


Query: 28  AGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRDKGSINGNSESRSYLEKKLVFC 87
           +G  L A LLP  D +  + + P     +G T+ +   ++ S+     SR+YL  +L   
Sbjct: 444 SGHALTAWLLPEADPLHQVSIIPRG-MALGVTEQAPEEERHSL-----SRAYLLDRLGVM 503

Query: 88  FGSYIAAKMLLPFGEENFLSSYELKQAQEIATRMVLQYGWGPDDSPAIYSRNNAVYFF-- 147
            G  I+ K  + FG+    +  +LKQA ++A RMV Q+G       A +SR+    F   
Sbjct: 504 LGGRISEK--ITFGDVTSGAESDLKQATQLARRMVCQWGMSDKIGAAAFSRSEEHVFLGR 561

Query: 148 -LSHPK 151
            LS P+
Sbjct: 564 ELSQPR 561

[Close]

BLAST of CsGy1G031870 vs. Swiss-Prot
Match: sp|Q6LUJ8|FTSH_PHOPR (ATP-dependent zinc metalloprotease FtsH OS=Photobacterium profundum (strain SS9) OX=298386 GN=ftsH PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-05
Identity = 32/129 (24.81%), Postives = 63/129 (48.84%), Query Frame = 0


Query: 16  TRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRDKGSINGNSE 75
           + + K   A   AG  +I  L+P+ D V  + + P   + +G T     +D+      S 
Sbjct: 431 SEDQKESTAYHEAGHAIIGRLVPDHDPVYKVSIIPRG-RALGVTMYLPEKDR-----ISH 490

Query: 76  SRSYLEKKLVFCFGSYIAAKMLLPFGEENFLSSYELKQAQEIATRMVLQYGWGPDDSPAI 135
           SR +LE  L   +G  +A +++    + +  +S ++++A +IA +MV Q+G+     P +
Sbjct: 491 SREFLESMLSSLYGGRLAEELIYGVDKVSTGASNDIERATDIARKMVTQWGFSEKMGPVL 550

Query: 136 YSRNNAVYF 145
           Y+ +    F
Sbjct: 551 YADDEGEVF 553

[Close]

BLAST of CsGy1G031870 vs. Swiss-Prot
Match: sp|P45219|FTSHL_HAEIN (ATP-dependent zinc metalloprotease FtsH homolog OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_1465 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.4e-05
Identity = 37/131 (28.24%), Postives = 60/131 (45.80%), Query Frame = 0


Query: 16  TRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRDKGSINGNSE 75
           T + K   A   AG  ++  L+P  D V  + + P   + +G T      D+ SI     
Sbjct: 149 TDKQKESTAYHEAGHAIVGYLVPEHDPVHKVTIIPRG-RALGVTFFLPEGDQISI----- 208

Query: 76  SRSYLEKKLVFCFGSYIAAKMLLPFGEENFL--SSYELKQAQEIATRMVLQYGWGPDDSP 135
           S+  LE KL   +   +A  ++  +GEEN    +S ++K A  IA  MV Q+G+     P
Sbjct: 209 SQKQLESKLSTLYAGRLAEDLI--YGEENISTGASNDIKVATNIARNMVTQWGFSEKLGP 268

Query: 136 AIYSRNNAVYF 145
            +Y+ +    F
Sbjct: 269 ILYTEDEGEVF 271

[Close]

BLAST of CsGy1G031870 vs. TrEMBL
Match: tr|A0A0A0M0B7|A0A0A0M0B7_CUCSA (Metalloprotease m41 ftsh OS=Cucumis sativus OX=3659 GN=Csa_1G673510 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 8.5e-78
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MESEPSSLTVLDIKWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTK 60
           MESEPSSLTVLDIKWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTK
Sbjct: 1   MESEPSSLTVLDIKWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTK 60

Query: 61  ISKRRDKGSINGNSESRSYLEKKLVFCFGSYIAAKMLLPFGEENFLSSYELKQAQEIATR 120
           ISKRRDKGSINGNSESRSYLEKKLVFCFGSYIAAKMLLPFGEENFLSSYELKQAQEIATR
Sbjct: 61  ISKRRDKGSINGNSESRSYLEKKLVFCFGSYIAAKMLLPFGEENFLSSYELKQAQEIATR 120

Query: 121 MVLQYGWGPDDSPAIYSRNNAV 143
           MVLQYGWGPDDSPAIYSRNNA+
Sbjct: 121 MVLQYGWGPDDSPAIYSRNNAI 142

[Close]

BLAST of CsGy1G031870 vs. TrEMBL
Match: tr|A0A1S3B9K0|A0A1S3B9K0_CUCME (probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487285 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.0e-67
Identity = 124/132 (93.94%), Postives = 128/132 (96.97%), Query Frame = 0


Query: 13   IKWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRDKGSING 72
            + WTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRD+GSING
Sbjct: 1089 LDWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRDEGSING 1148

Query: 73   NSESRSYLEKKLVFCFGSYIAAKMLLPFGEENFLSSYELKQAQEIATRMVLQYGWGPDDS 132
            NSESRSYLEKKLVFCFGSYIAA+MLLPFGEENFLSS ELKQAQEIATRMV+QYGWGPDDS
Sbjct: 1149 NSESRSYLEKKLVFCFGSYIAAQMLLPFGEENFLSSSELKQAQEIATRMVIQYGWGPDDS 1208

Query: 133  PAIYSRNNAVYF 145
            PAIY RNNAV F
Sbjct: 1209 PAIYCRNNAVGF 1220

[Close]

BLAST of CsGy1G031870 vs. TrEMBL
Match: tr|A0A2P4MQH2|A0A2P4MQH2_QUESU (Putative inactive atp-dependent zinc metalloprotease ftshi 5, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_24794 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.2e-63
Identity = 116/130 (89.23%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 13   IKWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRDKGSING 72
            I WTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKI+K R++GS+N 
Sbjct: 1114 IDWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKITKARNEGSMNA 1173

Query: 73   NSESRSYLEKKLVFCFGSYIAAKMLLPFGEENFLSSYELKQAQEIATRMVLQYGWGPDDS 132
            NSESRSYLEKKLVFCFGSYIAA+M+LPFGEENFLSS ELKQAQEIATRMV+QYGWGPDDS
Sbjct: 1174 NSESRSYLEKKLVFCFGSYIAAQMILPFGEENFLSSEELKQAQEIATRMVIQYGWGPDDS 1233

Query: 133  PAIYSRNNAV 143
            PAIY  +NAV
Sbjct: 1234 PAIYHHSNAV 1243

[Close]

BLAST of CsGy1G031870 vs. TrEMBL
Match: tr|W9RHH7|W9RHH7_9ROSA (ATP-dependent zinc metalloprotease FtsH OS=Morus notabilis OX=981085 GN=L484_024479 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.5e-63
Identity = 114/129 (88.37%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 13   IKWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRDKGSING 72
            + WTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKI+K R++GS+NG
Sbjct: 1070 LDWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKITKARNEGSVNG 1129

Query: 73   NSESRSYLEKKLVFCFGSYIAAKMLLPFGEENFLSSYELKQAQEIATRMVLQYGWGPDDS 132
            NSESRSYLEKKLVFCFGS++AA+MLLPFGEENFLSS ELKQAQEIATRMV+QYGWGPDDS
Sbjct: 1130 NSESRSYLEKKLVFCFGSHVAAQMLLPFGEENFLSSSELKQAQEIATRMVIQYGWGPDDS 1189

Query: 133  PAIYSRNNA 142
            PAIY  +NA
Sbjct: 1190 PAIYYHSNA 1198

[Close]

BLAST of CsGy1G031870 vs. TrEMBL
Match: tr|V7BHK6|V7BHK6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G116400g PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.7e-62
Identity = 112/131 (85.50%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 13   IKWTRETKFPHAVWAAGRGLIALLLPNFDVVDNLWLEPLSWQGIGCTKISKRRDKGSING 72
            + WTRETKFPHAVWAAGRGL ALLLPNFDVVDNLWLEPLSWQGIGCTKI+K R++GSING
Sbjct: 1053 LDWTRETKFPHAVWAAGRGLTALLLPNFDVVDNLWLEPLSWQGIGCTKITKARNEGSING 1112

Query: 73   NSESRSYLEKKLVFCFGSYIAAKMLLPFGEENFLSSYELKQAQEIATRMVLQYGWGPDDS 132
            NSESRSY+EKKLVFCFGSY+A++MLLPFGEEN LS  E++QAQEIATRMV+QYGWGPDDS
Sbjct: 1113 NSESRSYIEKKLVFCFGSYVASQMLLPFGEENLLSISEIQQAQEIATRMVIQYGWGPDDS 1172

Query: 133  PAIYSRNNAVY 144
            PAIY R+NAVY
Sbjct: 1173 PAIYYRSNAVY 1183

The following BLAST results are available for this feature:

BLAST of CsGy1G031870 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN66744.1	1.3e-77	99.30	Metalloprotease m41 ftsh [Cucumis sativus]	[more]
XP_004142587.1	2.0e-70	97.73	PREDICTED: uncharacterized protein LOC101207174 [Cucumis sativus]	[more]
XP_008443775.1	1.6e-67	93.94	PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chlorop...	[more]
XP_022158670.1	1.3e-66	93.08	probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic [Mom...	[more]
XP_022988004.1	2.1e-64	88.64	probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic isof...	[more]

BLAST of CsGy1G031870 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G04340.1	4.7e-58	77.69	FtsH extracellular protease family	[more]

BLAST of CsGy1G031870 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4J3N2\|FTSI5_ARATH	8.5e-57	77.69	Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=A...	[more]
sp\|C8WEG0\|FTSH_ZYMMN	1.4e-06	30.08	ATP-dependent zinc metalloprotease FtsH OS=Zymomonas mobilis subsp. mobilis (str...	[more]
sp\|Q3JEE4\|FTSH_NITOC	9.0e-06	30.16	ATP-dependent zinc metalloprotease FtsH OS=Nitrosococcus oceani (strain ATCC 197...	[more]
sp\|Q6LUJ8\|FTSH_PHOPR	1.2e-05	24.81	ATP-dependent zinc metalloprotease FtsH OS=Photobacterium profundum (strain SS9)...	[more]
sp\|P45219\|FTSHL_HAEIN	3.4e-05	28.24	ATP-dependent zinc metalloprotease FtsH homolog OS=Haemophilus influenzae (strai...	[more]

BLAST of CsGy1G031870 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0M0B7\|A0A0A0M0B7_CUCSA	8.5e-78	99.30	Metalloprotease m41 ftsh OS=Cucumis sativus OX=3659 GN=Csa_1G673510 PE=4 SV=1	[more]
tr\|A0A1S3B9K0\|A0A1S3B9K0_CUCME	1.0e-67	93.94	probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=C...	[more]
tr\|A0A2P4MQH2\|A0A2P4MQH2_QUESU	1.2e-63	89.23	Putative inactive atp-dependent zinc metalloprotease ftshi 5, chloroplastic OS=Q...	[more]
tr\|W9RHH7\|W9RHH7_9ROSA	3.5e-63	88.37	ATP-dependent zinc metalloprotease FtsH OS=Morus notabilis OX=981085 GN=L484_024...	[more]
tr\|V7BHK6\|V7BHK6_PHAVU	1.7e-62	85.50	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G116400g PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0004222	metalloendopeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **INTERPRO**
Term	Definition
IPR037219	Peptidase_M41-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004222	metalloendopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G031870.1	CsGy1G031870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.20.58.760		coord: 16..150 e-value: 1.7E-14 score: 55.8
None	No IPR available	PANTHER	PTHR23076	METALLOPROTEASE M41 FTSH	coord: 13..143
None	No IPR available	PANTHER	PTHR23076:SF58	INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 5, CHLOROPLASTIC-RELATED	coord: 13..143
IPR037219	Peptidase M41-like	SUPERFAMILY	SSF140990	FtsH protease domain-like	coord: 16..144

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G031870	Csa1G673510	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G031870	CSPI01G33070	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G031870	CmaCh10G010190	Cucurbita maxima (Rimu)	cgybcmaB019
CsGy1G031870	CmoCh10G010760	Cucurbita moschata (Rifu)	cgybcmoB018
CsGy1G031870	Cp4.1LG05g08360	Cucurbita pepo (Zucchini)	cgybcpeB135
CsGy1G031870	MELO3C010145.2	Melon (DHL92) v3.6.1	cgybmedB034
CsGy1G031870	CsaV3_1G045170	Cucumber (Chinese Long) v3	cgybcucB001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G031870	Wax gourd	cgybwgoB100
CsGy1G031870	Cucurbita maxima (Rimu)	cgybcmaB027
CsGy1G031870	Cucurbita moschata (Rifu)	cgybcmoB027
CsGy1G031870	Cucurbita pepo (Zucchini)	cgybcpeB112
CsGy1G031870	Bottle gourd (USVL1VR-Ls)	cgyblsiB055
CsGy1G031870	Melon (DHL92) v3.5.1	cgybmeB040
CsGy1G031870	Watermelon (97103) v1	cgybwmB021
CsGy1G031870	Silver-seed gourd	carcgybB0899