CsGy1G031830 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G031830
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	kelch repeat-containing protein At3g27220-like
Location	Chr1 : 30848084 .. 30849555 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCAGAAATCATCTGAAGAACGCTTCTTCTACCAACACCTTACTCTTTCTTATCACTTGTGCTGGTCTTCTTGGTGCTGCTCTCATTGCTGATTTGCTTTGGACATCTTCTTCCTCTTTTTCCATTGCATCAACTTGGGCCATTGGCAGAACGAAGCTTTATGTTATACCTCATTCATCCACTAACAATGCTACCCAGGTTAACACTTCTCAATTTACAACCCCCCCTCTTCCTTGATTTCATTGTTTCTCAATTCCTACTTACCCAACTCTTCATATTTATAGGTAGATGACAAGGAGACCGATTCTAGGAAATTCTTAACCGGAACTTTTTTTGATTTACCTGCACCTGATTTAGAATGGGAGGAGATACCATCAGCCCCTGTACCTCGTCTTGATGGGGCATCCATTCAGATTAACAATATTTTTTACGTCTTCGCAGGATATGGAAACATCAATTATGTAACGTTCTCTTCTCTACTCTTTTGTAATGCATATTTGATTTTGTATGTATAAGTTTAAGTATTGTGGGCTTTGGATTCCCTTATGCACCATATTATCACATGGGTATTCGGAAGAAGTATTATTATTTTGTATCCTTGGGCCTTTCATCTATGAATATTTCAGGTTCAAGACACCGCCTCTTATCTTCTCTTCTGCTTGCAGCTTAGATGAATCACGATTCGTTGTTGAAAGTTCAAATTTGTTAATATGGCAGTGCTGTATACATTACTGATGCTGTGTCATTTTCTCTCTGTTAGGTACATACTCACGTTGACATGTTCAATTTCTCTGATAATAAATGGATCGGCAAATTTGACATGCCAAAAGAGATGGCACATTCACATTTAGGAATGGCATGTGATGGTAGATACGTTTATGTGGTATCAGGACAATATGGACCACAATGCAGAGGGCCTACTGCCCGGACATTTGTGCTTGACACTGAAACGAAGAAGTGGAACAGCATGCCCCCGTTACCTGCTCCTAGGTATGCAGCTCTTCTATGAAGTATGTAAACCGTCTTGTTATTCCTATAAAGGTTATATGCTCTTACCGTGCAAAACATTTATTGCCAACTATTGTTGTCCACGTAGGTTTTCTGAAACCGTATTCTGTTTGATCCGCTTAATTGTTTGGTGGTTTCTCTTGGTTAGTTCCTTGCTTTGTGATTGTATCTTTATGCATATTTTATGTTGTCCCGTGATATTAGTCGAGATACGTGTCAGCTGGTCTGGGCACTCACAAATATAAAAAAAAAAATCTTTTATGCACAATGTGATCTAATTATCACATCCTAATCAAAAGCCTGTCCCTATCCAATTTGGATCATGAAGTGTTAGTTCGTGCAAATAAATTGATTATAAAGACTTGTTTTGTAGGTTTCTGTTTCCTAAAAGTTTGATTATACATCATATCATTGTGTAAAGATGGGCTTCACAAGTTGATTTTGGCGATCTAGGATCGTAA

mRNA sequence

ATGACCAGAAATCATCTGAAGAACGCTTCTTCTACCAACACCTTACTCTTTCTTATCACTTGTGCTGGTCTTCTTGGTGCTGCTCTCATTGCTGATTTGCTTTGGACATCTTCTTCCTCTTTTTCCATTGCATCAACTTGGGCCATTGGCAGAACGAAGCTTTATGTTATACCTCATTCATCCACTAACAATGCTACCCAGGTAGATGACAAGGAGACCGATTCTAGGAAATTCTTAACCGGAACTTTTTTTGATTTACCTGCACCTGATTTAGAATGGGAGGAGATACCATCAGCCCCTGTACCTCGTCTTGATGGGGCATCCATTCAGATTAACAATATTTTTTACGTCTTCGCAGGATATGGAAACATCAATTATGTACATACTCACGTTGACATGTTCAATTTCTCTGATAATAAATGGATCGGCAAATTTGACATGCCAAAAGAGATGGCACATTCACATTTAGGAATGGCATGTGATGGTAGATACGTTTATGTGGTATCAGGACAATATGGACCACAATGCAGAGGGCCTACTGCCCGGACATTTGTGCTTGACACTGAAACGAAGAAGTGGAACAGCATGCCCCCGTTACCTGCTCCTAGATGGGCTTCACAAGTTGATTTTGGCGATCTAGGATCGTAA

Coding sequence (CDS)

ATGACCAGAAATCATCTGAAGAACGCTTCTTCTACCAACACCTTACTCTTTCTTATCACTTGTGCTGGTCTTCTTGGTGCTGCTCTCATTGCTGATTTGCTTTGGACATCTTCTTCCTCTTTTTCCATTGCATCAACTTGGGCCATTGGCAGAACGAAGCTTTATGTTATACCTCATTCATCCACTAACAATGCTACCCAGGTAGATGACAAGGAGACCGATTCTAGGAAATTCTTAACCGGAACTTTTTTTGATTTACCTGCACCTGATTTAGAATGGGAGGAGATACCATCAGCCCCTGTACCTCGTCTTGATGGGGCATCCATTCAGATTAACAATATTTTTTACGTCTTCGCAGGATATGGAAACATCAATTATGTACATACTCACGTTGACATGTTCAATTTCTCTGATAATAAATGGATCGGCAAATTTGACATGCCAAAAGAGATGGCACATTCACATTTAGGAATGGCATGTGATGGTAGATACGTTTATGTGGTATCAGGACAATATGGACCACAATGCAGAGGGCCTACTGCCCGGACATTTGTGCTTGACACTGAAACGAAGAAGTGGAACAGCATGCCCCCGTTACCTGCTCCTAGATGGGCTTCACAAGTTGATTTTGGCGATCTAGGATCGTAA

Protein sequence

MTRNHLKNASSTNTLLFLITCAGLLGAALIADLLWTSSSSFSIASTWAIGRTKLYVIPHSSTNNATQVDDKETDSRKFLTGTFFDLPAPDLEWEEIPSAPVPRLDGASIQINNIFYVFAGYGNINYVHTHVDMFNFSDNKWIGKFDMPKEMAHSHLGMACDGRYVYVVSGQYGPQCRGPTARTFVLDTETKKWNSMPPLPAPRWASQVDFGDLGS

Homology

[Close]

BLAST of CsGy1G031830 vs. NCBI nr
Match: XP_004142543.1 (PREDICTED: kelch repeat-containing protein At3g27220-like [Cucumis sativus] >KGN66739.1 hypothetical protein Csa_1G666980 [Cucumis sativus])

HSP 1 Score: 424.9 bits (1091), Expect = 1.7e-115
Identity = 204/205 (99.51%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MTRNHLKNASSTNTLLFLITCAGLLGAALIADLLWTSSSSFSIASTWAIGRTKLYVIPHS 60
           MTRNHLKNASSTNTLLFLITCAGLLGAALIADLLWTSSSSFSIASTWAIGRTKLYVIPHS
Sbjct: 1   MTRNHLKNASSTNTLLFLITCAGLLGAALIADLLWTSSSSFSIASTWAIGRTKLYVIPHS 60

Query: 61  STNNATQVDDKETDSRKFLTGTFFDLPAPDLEWEEIPSAPVPRLDGASIQINNIFYVFAG 120
           STNNATQVDDKETDSRKFLTGTFFDLPAPDLEWEEIPSAPVPRLDGASIQINNIFYVFAG
Sbjct: 61  STNNATQVDDKETDSRKFLTGTFFDLPAPDLEWEEIPSAPVPRLDGASIQINNIFYVFAG 120

Query: 121 YGNINYVHTHVDMFNFSDNKWIGKFDMPKEMAHSHLGMACDGRYVYVVSGQYGPQCRGPT 180
           YGNINYVHTHVDMFNFSDNKWIGKFDMPKEMAHSHLGMACDGRYVYVVSGQYGPQCRGPT
Sbjct: 121 YGNINYVHTHVDMFNFSDNKWIGKFDMPKEMAHSHLGMACDGRYVYVVSGQYGPQCRGPT 180

Query: 181 ARTFVLDTETKKWNSMPPLPAPRWA 206
           ARTFVLDTETKKWNSMPPLPAPR+A
Sbjct: 181 ARTFVLDTETKKWNSMPPLPAPRYA 205

[Close]

BLAST of CsGy1G031830 vs. NCBI nr
Match: XP_008443768.1 (PREDICTED: kelch repeat-containing protein At3g27220-like [Cucumis melo])

HSP 1 Score: 411.4 bits (1056), Expect = 1.9e-111
Identity = 198/205 (96.59%), Postives = 202/205 (98.54%), Query Frame = 0


Query: 1   MTRNHLKNASSTNTLLFLITCAGLLGAALIADLLWTSSSSFSIASTWAIGRTKLYVIPHS 60
           MTRNH KNASSTNTLLFLITCAGLLGAALIADLLWTSSSSFSIASTWAIGRTKLYVIPHS
Sbjct: 1   MTRNHHKNASSTNTLLFLITCAGLLGAALIADLLWTSSSSFSIASTWAIGRTKLYVIPHS 60

Query: 61  STNNATQVDDKETDSRKFLTGTFFDLPAPDLEWEEIPSAPVPRLDGASIQINNIFYVFAG 120
           ST+NATQVDDKE DSRKFLTGT+FDLPAPDLEWEEIPSAPVPRLDGASIQINNIFYVFAG
Sbjct: 61  STHNATQVDDKEIDSRKFLTGTYFDLPAPDLEWEEIPSAPVPRLDGASIQINNIFYVFAG 120

Query: 121 YGNINYVHTHVDMFNFSDNKWIGKFDMPKEMAHSHLGMACDGRYVYVVSGQYGPQCRGPT 180
           YGNINYVH+HVDMFNFSDNKWIGKFDMPKEMAHSHLGMA DGRYVYVVSGQYGPQCRGPT
Sbjct: 121 YGNINYVHSHVDMFNFSDNKWIGKFDMPKEMAHSHLGMASDGRYVYVVSGQYGPQCRGPT 180

Query: 181 ARTFVLDTETKKWNSMPPLPAPRWA 206
           ARTFVLDTETKKWNSMPPLPAPR+A
Sbjct: 181 ARTFVLDTETKKWNSMPPLPAPRYA 205

[Close]

BLAST of CsGy1G031830 vs. NCBI nr
Match: XP_022988124.1 (kelch repeat-containing protein At3g27220-like [Cucurbita maxima])

HSP 1 Score: 357.1 bits (915), Expect = 4.3e-95
Identity = 170/210 (80.95%), Postives = 189/210 (90.00%), Query Frame = 0


Query: 1   MTRNHLKNASSTNTLLFLITCAGLLGAALIADLLWTSSSS-----FSIASTWAIGRTKLY 60
           MTRNH KNASST  L+FLITCA LLGAALIAD+LWTSSSS     FSI+S WAI R ++ 
Sbjct: 1   MTRNHQKNASSTKKLVFLITCAALLGAALIADVLWTSSSSLSSSYFSISSNWAIRRPEVL 60

Query: 61  VIPHSSTNNATQVDDKETDSRKFLTGTFFDLPAPDLEWEEIPSAPVPRLDGASIQINNIF 120
           V+P SST+NATQVD+KE DSR+FL GT+FDLPAPDLEWEE+PSAPVPRLDGA+IQI NIF
Sbjct: 61  VVPDSSTDNATQVDEKEIDSRRFLPGTYFDLPAPDLEWEEMPSAPVPRLDGAAIQIKNIF 120

Query: 121 YVFAGYGNINYVHTHVDMFNFSDNKWIGKFDMPKEMAHSHLGMACDGRYVYVVSGQYGPQ 180
           YVFAGYG I+YVH+HVDMFNF+DN WIGKFDMPKEM HSHLG+A DGRY+YV+SGQYGPQ
Sbjct: 121 YVFAGYGTIDYVHSHVDMFNFTDNTWIGKFDMPKEMGHSHLGVATDGRYIYVISGQYGPQ 180

Query: 181 CRGPTARTFVLDTETKKWNSMPPLPAPRWA 206
           CRGPTARTFVLDTETKKWNSMPPLPAPR+A
Sbjct: 181 CRGPTARTFVLDTETKKWNSMPPLPAPRYA 210

[Close]

BLAST of CsGy1G031830 vs. NCBI nr
Match: XP_023534291.1 (kelch repeat-containing protein At3g27220-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 354.4 bits (908), Expect = 2.8e-94
Identity = 168/210 (80.00%), Postives = 188/210 (89.52%), Query Frame = 0


Query: 1   MTRNHLKNASSTNTLLFLITCAGLLGAALIADLLWTSSSS-----FSIASTWAIGRTKLY 60
           MTRNH KNASST  L+FLITCA LLGAALIAD+LWTSSSS     FSI+S WAI R ++ 
Sbjct: 1   MTRNHQKNASSTKKLVFLITCAALLGAALIADVLWTSSSSLSSSYFSISSNWAIRRPEVL 60

Query: 61  VIPHSSTNNATQVDDKETDSRKFLTGTFFDLPAPDLEWEEIPSAPVPRLDGASIQINNIF 120
           V+P SST+NATQVD+K+ DSR+FL GT+FDLPAPDLEWEE+PSAPVPRLDGA+IQI NIF
Sbjct: 61  VVPDSSTDNATQVDEKQIDSRRFLPGTYFDLPAPDLEWEEMPSAPVPRLDGAAIQIKNIF 120

Query: 121 YVFAGYGNINYVHTHVDMFNFSDNKWIGKFDMPKEMAHSHLGMACDGRYVYVVSGQYGPQ 180
           YVFAGYG I+YVH+HVDMFNF+DN WIGKFDMPKEM HSHLG+A DGRY+Y +SGQYGPQ
Sbjct: 121 YVFAGYGTIDYVHSHVDMFNFTDNTWIGKFDMPKEMGHSHLGVATDGRYIYAISGQYGPQ 180

Query: 181 CRGPTARTFVLDTETKKWNSMPPLPAPRWA 206
           CRGPTARTFVLDTETKKWNSMPPLPAPR+A
Sbjct: 181 CRGPTARTFVLDTETKKWNSMPPLPAPRYA 210

[Close]

BLAST of CsGy1G031830 vs. NCBI nr
Match: XP_022961228.1 (kelch repeat-containing protein At3g27220-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 347.1 bits (889), Expect = 4.4e-92
Identity = 167/211 (79.15%), Postives = 189/211 (89.57%), Query Frame = 0


Query: 1   MTRNHLKNASSTNTLLFLITCAGLLGAALIADLLWTSSSS-----FSIASTWAIGRTKLY 60
           MTRNH KNASST  L+FLITCA LLGAALIAD+LWTSSSS     FSI+S WAI R ++ 
Sbjct: 1   MTRNHQKNASSTKKLVFLITCAALLGAALIADVLWTSSSSLSSSYFSISSNWAIRRPEVL 60

Query: 61  VIPHSSTNNA-TQVDDKETDSRKFLTGTFFDLPAPDLEWEEIPSAPVPRLDGASIQINNI 120
           V+P SST+NA T+VD+K+ DSR+FL GT+FDLPAPDLEWEE+PSAPVPRLDGA+IQI NI
Sbjct: 61  VVPDSSTDNATTRVDEKQIDSRRFLPGTYFDLPAPDLEWEEMPSAPVPRLDGAAIQIKNI 120

Query: 121 FYVFAGYGNINYVHTHVDMFNFSDNKWIGKFDMPKEMAHSHLGMACDGRYVYVVSGQYGP 180
           FYVFAGYG I+YVH+HVDMFNF+DN WIGKFDMPKEM +SHLG+A DGRY+YV+SGQYGP
Sbjct: 121 FYVFAGYGTIDYVHSHVDMFNFTDNTWIGKFDMPKEMGNSHLGVATDGRYIYVISGQYGP 180

Query: 181 QCRGPTARTFVLDTETKKWNSMPPLPAPRWA 206
           QCRGPTARTFVLDTETKKWNSMPPLPAPR+A
Sbjct: 181 QCRGPTARTFVLDTETKKWNSMPPLPAPRYA 211

[Close]

BLAST of CsGy1G031830 vs. TAIR10
Match: AT1G51540.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 220.7 bits (561), Expect = 8.7e-58
Identity = 106/194 (54.64%), Postives = 140/194 (72.16%), Query Frame = 0


Query: 18  LITCAGLLGAALIADLLWTSSSSFSIASTWAIGRTKLYVIPHSSTNNATQVDDKETDSRK 77
           L++C  LL   LIAD LW +S  FS A+  A G +    +P S T       +K+T  +K
Sbjct: 12  LVSCIALLATGLIADFLWATSHRFSSAAISA-GLS----LPSSLTTVIVPGQEKDTKKKK 71

Query: 78  ------FLTGTFFDLPAPDLEWEEIPSAPVPRLDGASIQINNIFYVFAGYGNINYVHTHV 137
                  L+ TF DLPAP+L+WE++ ++PVPRLDGA+IQI ++ YVFAGYG I+ VH+HV
Sbjct: 72  DSVKERKLSNTFQDLPAPELKWEKMAASPVPRLDGAAIQIRDLLYVFAGYGTIDLVHSHV 131

Query: 138 DMFNFSDNKWIGKFDMPKEMAHSHLGMACDGRYVYVVSGQYGPQCRGPTARTFVLDTETK 197
           D++NF+DN W G+F+MPK+MAHSHLGM  DGRY+Y+V+GQ+GPQCRGPTA+TFVLDT+T 
Sbjct: 132 DIYNFTDNSWGGRFNMPKDMAHSHLGMVTDGRYIYIVTGQFGPQCRGPTAKTFVLDTDTN 191

Query: 198 KWNSMPPLPAPRWA 206
            W    PLP PR+A
Sbjct: 192 TWKDFVPLPVPRYA 200

[Close]

BLAST of CsGy1G031830 vs. TAIR10
Match: AT3G27220.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 209.1 bits (531), Expect = 2.6e-54
Identity = 100/188 (53.19%), Postives = 134/188 (71.28%), Query Frame = 0


Query: 24  LLGAALIADLLWTSSSSFSIASTWAI------GRTKLYVIPHSSTNNATQVDDKETDSRK 83
           +LG   IA  L  SSS  S+++ ++I         ++ +I        ++  +   D  +
Sbjct: 27  VLGIGFIAAFLCLSSSIPSVSAVFSIWVPVNRPEIQIPIIDSKIVQKRSKQSNDTKDHVR 86

Query: 84  FLTGTFFDLPAPDLEWEEIPSAPVPRLDGASIQINNIFYVFAGYGNINYVHTHVDMFNFS 143
           FL+  F D+PAP+L+WEE+ SAPVPRLDG S+QINN+ YVF+GYG+++YVH+HVD+FNF+
Sbjct: 87  FLSAIFADIPAPELKWEEMESAPVPRLDGYSVQINNLLYVFSGYGSLDYVHSHVDVFNFT 146

Query: 144 DNKWIGKFDMPKEMAHSHLGMACDGRYVYVVSGQYGPQCRGPTARTFVLDTETKKWNSMP 203
           DNKW  +F  PKEMA+SHLG+  DGRYVYVVSGQ GPQCRGPT+R+FVLD+ TK W   P
Sbjct: 147 DNKWCDRFHTPKEMANSHLGIVTDGRYVYVVSGQLGPQCRGPTSRSFVLDSFTKTWLEFP 206

Query: 204 PLPAPRWA 206
            LPAPR+A
Sbjct: 207 SLPAPRYA 214

[Close]

BLAST of CsGy1G031830 vs. Swiss-Prot
Match: sp|Q9LK31|Y3272_ARATH (Kelch repeat-containing protein At3g27220 OS=Arabidopsis thaliana OX=3702 GN=At3g27220 PE=2 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.7e-53
Identity = 100/188 (53.19%), Postives = 134/188 (71.28%), Query Frame = 0


Query: 24  LLGAALIADLLWTSSSSFSIASTWAI------GRTKLYVIPHSSTNNATQVDDKETDSRK 83
           +LG   IA  L  SSS  S+++ ++I         ++ +I        ++  +   D  +
Sbjct: 27  VLGIGFIAAFLCLSSSIPSVSAVFSIWVPVNRPEIQIPIIDSKIVQKRSKQSNDTKDHVR 86

Query: 84  FLTGTFFDLPAPDLEWEEIPSAPVPRLDGASIQINNIFYVFAGYGNINYVHTHVDMFNFS 143
           FL+  F D+PAP+L+WEE+ SAPVPRLDG S+QINN+ YVF+GYG+++YVH+HVD+FNF+
Sbjct: 87  FLSAIFADIPAPELKWEEMESAPVPRLDGYSVQINNLLYVFSGYGSLDYVHSHVDVFNFT 146

Query: 144 DNKWIGKFDMPKEMAHSHLGMACDGRYVYVVSGQYGPQCRGPTARTFVLDTETKKWNSMP 203
           DNKW  +F  PKEMA+SHLG+  DGRYVYVVSGQ GPQCRGPT+R+FVLD+ TK W   P
Sbjct: 147 DNKWCDRFHTPKEMANSHLGIVTDGRYVYVVSGQLGPQCRGPTSRSFVLDSFTKTWLEFP 206

Query: 204 PLPAPRWA 206
            LPAPR+A
Sbjct: 207 SLPAPRYA 214

[Close]

BLAST of CsGy1G031830 vs. TrEMBL
Match: tr|A0A0A0M0B2|A0A0A0M0B2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G666980 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 1.1e-115
Identity = 204/205 (99.51%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MTRNHLKNASSTNTLLFLITCAGLLGAALIADLLWTSSSSFSIASTWAIGRTKLYVIPHS 60
           MTRNHLKNASSTNTLLFLITCAGLLGAALIADLLWTSSSSFSIASTWAIGRTKLYVIPHS
Sbjct: 1   MTRNHLKNASSTNTLLFLITCAGLLGAALIADLLWTSSSSFSIASTWAIGRTKLYVIPHS 60

Query: 61  STNNATQVDDKETDSRKFLTGTFFDLPAPDLEWEEIPSAPVPRLDGASIQINNIFYVFAG 120
           STNNATQVDDKETDSRKFLTGTFFDLPAPDLEWEEIPSAPVPRLDGASIQINNIFYVFAG
Sbjct: 61  STNNATQVDDKETDSRKFLTGTFFDLPAPDLEWEEIPSAPVPRLDGASIQINNIFYVFAG 120

Query: 121 YGNINYVHTHVDMFNFSDNKWIGKFDMPKEMAHSHLGMACDGRYVYVVSGQYGPQCRGPT 180
           YGNINYVHTHVDMFNFSDNKWIGKFDMPKEMAHSHLGMACDGRYVYVVSGQYGPQCRGPT
Sbjct: 121 YGNINYVHTHVDMFNFSDNKWIGKFDMPKEMAHSHLGMACDGRYVYVVSGQYGPQCRGPT 180

Query: 181 ARTFVLDTETKKWNSMPPLPAPRWA 206
           ARTFVLDTETKKWNSMPPLPAPR+A
Sbjct: 181 ARTFVLDTETKKWNSMPPLPAPRYA 205

[Close]

BLAST of CsGy1G031830 vs. TrEMBL
Match: tr|A0A1S3B8V7|A0A1S3B8V7_CUCME (kelch repeat-containing protein At3g27220-like OS=Cucumis melo OX=3656 GN=LOC103487280 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 1.3e-111
Identity = 198/205 (96.59%), Postives = 202/205 (98.54%), Query Frame = 0


Query: 1   MTRNHLKNASSTNTLLFLITCAGLLGAALIADLLWTSSSSFSIASTWAIGRTKLYVIPHS 60
           MTRNH KNASSTNTLLFLITCAGLLGAALIADLLWTSSSSFSIASTWAIGRTKLYVIPHS
Sbjct: 1   MTRNHHKNASSTNTLLFLITCAGLLGAALIADLLWTSSSSFSIASTWAIGRTKLYVIPHS 60

Query: 61  STNNATQVDDKETDSRKFLTGTFFDLPAPDLEWEEIPSAPVPRLDGASIQINNIFYVFAG 120
           ST+NATQVDDKE DSRKFLTGT+FDLPAPDLEWEEIPSAPVPRLDGASIQINNIFYVFAG
Sbjct: 61  STHNATQVDDKEIDSRKFLTGTYFDLPAPDLEWEEIPSAPVPRLDGASIQINNIFYVFAG 120

Query: 121 YGNINYVHTHVDMFNFSDNKWIGKFDMPKEMAHSHLGMACDGRYVYVVSGQYGPQCRGPT 180
           YGNINYVH+HVDMFNFSDNKWIGKFDMPKEMAHSHLGMA DGRYVYVVSGQYGPQCRGPT
Sbjct: 121 YGNINYVHSHVDMFNFSDNKWIGKFDMPKEMAHSHLGMASDGRYVYVVSGQYGPQCRGPT 180

Query: 181 ARTFVLDTETKKWNSMPPLPAPRWA 206
           ARTFVLDTETKKWNSMPPLPAPR+A
Sbjct: 181 ARTFVLDTETKKWNSMPPLPAPRYA 205

[Close]

BLAST of CsGy1G031830 vs. TrEMBL
Match: tr|V4U8D1|V4U8D1_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10015294mg PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.9e-71
Identity = 128/217 (58.99%), Postives = 168/217 (77.42%), Query Frame = 0


Query: 4   NHLKNASSTNTLLFLITCAGLLGAALIADLLWTSSSS--------FSIASTWAIGRTKLY 63
           +H K  + T T  + +   GLLGAALIAD +W SSSS         S+AS WA+ ++ + 
Sbjct: 5   DHHKQHTYTKTGCWFLCVLGLLGAALIADFMWASSSSSFSSSSAHLSVASNWALEKSGVV 64

Query: 64  VIPHSST-------NNATQVDDKETDSRKFLTGTFFDLPAPDLEWEEIPSAPVPRLDGAS 123
           VIPH +         +   +D K  D+ +FL+ TF DLPAPDLEWE++PSAPVPRLDGA+
Sbjct: 65  VIPHVNATKIDRQRKSVAVIDKKGQDAERFLSATFADLPAPDLEWEQMPSAPVPRLDGAA 124

Query: 124 IQINNIFYVFAGYGNINYVHTHVDMFNFSDNKWIGKFDMPKEMAHSHLGMACDGRYVYVV 183
           IQI N+FYVFAGYG+++YVH+HVD++NF+DNKW+ +FDMPK+MAHSHLG+  DGRY+Y+V
Sbjct: 125 IQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIV 184

Query: 184 SGQYGPQCRGPTARTFVLDTETKKWNSMPPLPAPRWA 206
           SGQYGPQCRGPT+RTFVLD+ET+KW+SMPPLP+PR++
Sbjct: 185 SGQYGPQCRGPTSRTFVLDSETRKWDSMPPLPSPRYS 221

[Close]

BLAST of CsGy1G031830 vs. TrEMBL
Match: tr|V4W342|V4W342_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10015294mg PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.9e-71
Identity = 128/217 (58.99%), Postives = 168/217 (77.42%), Query Frame = 0


Query: 4   NHLKNASSTNTLLFLITCAGLLGAALIADLLWTSSSS--------FSIASTWAIGRTKLY 63
           +H K  + T T  + +   GLLGAALIAD +W SSSS         S+AS WA+ ++ + 
Sbjct: 5   DHHKQHTYTKTGCWFLCVLGLLGAALIADFMWASSSSSFSSSSAHLSVASNWALEKSGVV 64

Query: 64  VIPHSST-------NNATQVDDKETDSRKFLTGTFFDLPAPDLEWEEIPSAPVPRLDGAS 123
           VIPH +         +   +D K  D+ +FL+ TF DLPAPDLEWE++PSAPVPRLDGA+
Sbjct: 65  VIPHVNATKIDRQRKSVAVIDKKGQDAERFLSATFADLPAPDLEWEQMPSAPVPRLDGAA 124

Query: 124 IQINNIFYVFAGYGNINYVHTHVDMFNFSDNKWIGKFDMPKEMAHSHLGMACDGRYVYVV 183
           IQI N+FYVFAGYG+++YVH+HVD++NF+DNKW+ +FDMPK+MAHSHLG+  DGRY+Y+V
Sbjct: 125 IQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIV 184

Query: 184 SGQYGPQCRGPTARTFVLDTETKKWNSMPPLPAPRWA 206
           SGQYGPQCRGPT+RTFVLD+ET+KW+SMPPLP+PR++
Sbjct: 185 SGQYGPQCRGPTSRTFVLDSETRKWDSMPPLPSPRYS 221

[Close]

BLAST of CsGy1G031830 vs. TrEMBL
Match: tr|V4TIX3|V4TIX3_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10015294mg PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.9e-71
Identity = 128/217 (58.99%), Postives = 168/217 (77.42%), Query Frame = 0


Query: 4   NHLKNASSTNTLLFLITCAGLLGAALIADLLWTSSSS--------FSIASTWAIGRTKLY 63
           +H K  + T T  + +   GLLGAALIAD +W SSSS         S+AS WA+ ++ + 
Sbjct: 5   DHHKQHTYTKTGCWFLCVLGLLGAALIADFMWASSSSSFSSSSAHLSVASNWALEKSGVV 64

Query: 64  VIPHSST-------NNATQVDDKETDSRKFLTGTFFDLPAPDLEWEEIPSAPVPRLDGAS 123
           VIPH +         +   +D K  D+ +FL+ TF DLPAPDLEWE++PSAPVPRLDGA+
Sbjct: 65  VIPHVNATKIDRQRKSVAVIDKKGQDAERFLSATFADLPAPDLEWEQMPSAPVPRLDGAA 124

Query: 124 IQINNIFYVFAGYGNINYVHTHVDMFNFSDNKWIGKFDMPKEMAHSHLGMACDGRYVYVV 183
           IQI N+FYVFAGYG+++YVH+HVD++NF+DNKW+ +FDMPK+MAHSHLG+  DGRY+Y+V
Sbjct: 125 IQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIV 184

Query: 184 SGQYGPQCRGPTARTFVLDTETKKWNSMPPLPAPRWA 206
           SGQYGPQCRGPT+RTFVLD+ET+KW+SMPPLP+PR++
Sbjct: 185 SGQYGPQCRGPTSRTFVLDSETRKWDSMPPLPSPRYS 221

The following BLAST results are available for this feature:

BLAST of CsGy1G031830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142543.1	1.7e-115	99.51	PREDICTED: kelch repeat-containing protein At3g27220-like [Cucumis sativus] >KGN...	[more]
XP_008443768.1	1.9e-111	96.59	PREDICTED: kelch repeat-containing protein At3g27220-like [Cucumis melo]	[more]
XP_022988124.1	4.3e-95	80.95	kelch repeat-containing protein At3g27220-like [Cucurbita maxima]	[more]
XP_023534291.1	2.8e-94	80.00	kelch repeat-containing protein At3g27220-like [Cucurbita pepo subsp. pepo]	[more]
XP_022961228.1	4.4e-92	79.15	kelch repeat-containing protein At3g27220-like isoform X1 [Cucurbita moschata]	[more]

BLAST of CsGy1G031830 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G51540.1	8.7e-58	54.64	Galactose oxidase/kelch repeat superfamily protein	[more]
AT3G27220.1	2.6e-54	53.19	Galactose oxidase/kelch repeat superfamily protein	[more]

BLAST of CsGy1G031830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LK31\|Y3272_ARATH	4.7e-53	53.19	Kelch repeat-containing protein At3g27220 OS=Arabidopsis thaliana OX=3702 GN=At3...	[more]

BLAST of CsGy1G031830 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0M0B2\|A0A0A0M0B2_CUCSA	1.1e-115	99.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G666980 PE=4 SV=1	[more]
tr\|A0A1S3B8V7\|A0A1S3B8V7_CUCME	1.3e-111	96.59	kelch repeat-containing protein At3g27220-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|V4U8D1\|V4U8D1_9ROSI	2.9e-71	58.99	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10015294mg PE=4 ...	[more]
tr\|V4W342\|V4W342_9ROSI	2.9e-71	58.99	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10015294mg PE=4 ...	[more]
tr\|V4TIX3\|V4TIX3_9ROSI	2.9e-71	58.99	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10015294mg PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR015915	Kelch-typ_b-propeller

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G031830.1	CsGy1G031830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13964	Kelch_6	coord: 155..203 e-value: 9.1E-7 score: 28.8
None	No IPR available	PFAM	PF13418	Kelch_4	coord: 102..141 e-value: 1.2E-6 score: 28.3
None	No IPR available	PANTHER	PTHR24413:SF111	SUBFAMILY NOT NAMED	coord: 4..208
None	No IPR available	PANTHER	PTHR24413	FAMILY NOT NAMED	coord: 4..208
IPR015915	Kelch-type beta propeller	GENE3D	G3DSA:2.120.10.80		coord: 38..210 e-value: 1.5E-18 score: 68.6
IPR015915	Kelch-type beta propeller	SUPERFAMILY	SSF117281	Kelch motif	coord: 90..207

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G031830	Cucurbita maxima (Rimu)	cgybcmaB019
CsGy1G031830	Cucurbita maxima (Rimu)	cgybcmaB027
CsGy1G031830	Cucurbita moschata (Rifu)	cgybcmoB018
CsGy1G031830	Cucurbita moschata (Rifu)	cgybcmoB027
CsGy1G031830	Cucurbita pepo (Zucchini)	cgybcpeB112
CsGy1G031830	Cucurbita pepo (Zucchini)	cgybcpeB135
CsGy1G031830	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G031830	Bottle gourd (USVL1VR-Ls)	cgyblsiB055
CsGy1G031830	Melon (DHL92) v3.5.1	cgybmeB040
CsGy1G031830	Melon (DHL92) v3.6.1	cgybmedB034
CsGy1G031830	Watermelon (97103) v1	cgybwmB021
CsGy1G031830	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G031830	Silver-seed gourd	carcgybB0899
CsGy1G031830	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G031830	Wax gourd	cgybwgoB100
CsGy1G031830	Wax gourd	cgybwgoB113