CsGy1G031820 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G031820
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	kelch repeat-containing protein At3g27220-like
Location	Chr1 : 30846059 .. 30847680 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGGCAGCAAGGAGAATCGCCACACACCTGGATTGGAGCACTGGAGCATTGCTGTAAAAGATGGAAAAGTACTGGAGAAGAAGTGGCGGACTGAAGTACCCATACCTCGTGGAGGACCACACAGGTCTTGGACACTATTCTTTTTTTAATTAAAATTCCATAACTAGTCATTTAGAGTTGTAATCCATAATGAATGGAATAAGGATGTTCTAGACAATCCAAATATTTGAAAACAGTTCAAGTAGTGTATCCAATATTTCAACTTGACATTCTCCAGGGCCTGTATCGTGGTCGATGATCGGCTTTTTGTTATCGGTGGTCAAGAAGGTGACTTCATGGCAAAACCTGGTTCGCCTATTTTTAAGTGCTCCCGTAGGCATGAGGTATTTTTCGATGTTAGCTCAAGAGTGATAAACTGGCTCATCATATTAAATGCATGTGTAGGTCATATTTTACATTATCCCGAAAGGCAGATATTCCTCACATTTCTTTCAATGTTCACCCTTTGTTCACCTAGCATCACAATAGGTTTTGTTCATCCTTTGTTTTGTTTTTGTTTGTTTGTTTTTTGTTTTTCTAAGACGAAACATAACATTTCATTGATACAATGAAAAGAGACTAAGGCTCAAAATACAAAAAAAGAAAAAAAAAAAAGAAACGAAAAATTTGAAAAGAAAACATAAAAGATAAAAAATACAAGATAAGCAAGGCTTAAACTGAAAGATAAATGTCCCACAATTCAAACAAAAAGCTCAGAAAGAGAACACCAAGAAGAAGTATTATCGAGTCTTGGAACTTCAGAACGATCTATCCACAGAAGAGATTTATTTGACTCCTCTCGAACCATCCTTTGTTGAATCTACTTTTTCATGTTTTCAGGTTGTTTATGGTGATGTCTACATGCTGGATAATGAAAAGAAATGGAAAACATTAAGCCCTATGCCAAAGCCCGATTCTCATATTGAGTTTGCTTGGGTTGTTGTCAATAATTCTATTATCATCACCGGCGGTACAACAGAAAAACACCCAATTACCAAACGAATGATCTTGGTTGGGGAGGTCTTCCGATTTGATTTGGATTCATTTGTATGAACATATCTCTCTAATCTTTGAACAAAACCCTTTCTTTAAACCAACCATTATATTTGTGTTGATCTTGTGTTTTTGGTTCCCTGACAAATGCAGACTTGGTCAGTAATTGGAAAGCTCCCTTACCGCATAAAAACGACGCTAGCTGGTTTTTGGGATGGATACTTGTACTTCACCTCAGGGCAGCGGGACCGAGGACCTGATAACCCACAGCCGAGAGCAGTGGTAGGAGATATGTGGAGAACCAAGTTAAAATTTTAAGCGTGGTTTAATTTGTCTCACAGATGCGTTGTGTTAGACTTTTGAAAATTTACTCAGATTTATTTAGATTCCTCAATTCTTAAATCTTTTGTATATCATGTTATATCTTCACTTACAATTTAGGGAAGTTTGTTGTATCCTATTTGGTTCACCCTATCATAAATGGGTGCCTATAGTTTATGGAAATCTCAGTGAAAATCAGATTGAAATCTTATTTATCTTTTAGGTTTTTCTTGGTATTGGAGGGATAGTGTTTCTATTTTATTGA

mRNA sequence

ATGGGTGGCAGCAAGGAGAATCGCCACACACCTGGATTGGAGCACTGGAGCATTGCTGTAAAAGATGGAAAAGTACTGGAGAAGAAGTGGCGGACTGAAGTACCCATACCTCGTGGAGGACCACACAGGGCCTGTATCGTGGTCGATGATCGGCTTTTTGTTATCGGTGGTCAAGAAGGTGACTTCATGGCAAAACCTGGTTCGCCTATTTTTAAGTGCTCCCGTAGGCATGAGACTTGGTCAGTAATTGGAAAGCTCCCTTACCGCATAAAAACGACGCTAGCTGGTTTTTGGGATGGATACTTGTACTTCACCTCAGGGCAGCGGGACCGAGGACCTGATAACCCACAGCCGAGAGCAGTGGTTTTTCTTGGTATTGGAGGGATAGTGTTTCTATTTTATTGA

Coding sequence (CDS)

ATGGGTGGCAGCAAGGAGAATCGCCACACACCTGGATTGGAGCACTGGAGCATTGCTGTAAAAGATGGAAAAGTACTGGAGAAGAAGTGGCGGACTGAAGTACCCATACCTCGTGGAGGACCACACAGGGCCTGTATCGTGGTCGATGATCGGCTTTTTGTTATCGGTGGTCAAGAAGGTGACTTCATGGCAAAACCTGGTTCGCCTATTTTTAAGTGCTCCCGTAGGCATGAGACTTGGTCAGTAATTGGAAAGCTCCCTTACCGCATAAAAACGACGCTAGCTGGTTTTTGGGATGGATACTTGTACTTCACCTCAGGGCAGCGGGACCGAGGACCTGATAACCCACAGCCGAGAGCAGTGGTTTTTCTTGGTATTGGAGGGATAGTGTTTCTATTTTATTGA

Protein sequence

MGGSKENRHTPGLEHWSIAVKDGKVLEKKWRTEVPIPRGGPHRACIVVDDRLFVIGGQEGDFMAKPGSPIFKCSRRHETWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRDRGPDNPQPRAVVFLGIGGIVFLFY

Homology

[Close]

BLAST of CsGy1G031820 vs. NCBI nr
Match: XP_004142543.1 (PREDICTED: kelch repeat-containing protein At3g27220-like [Cucumis sativus] >KGN66739.1 hypothetical protein Csa_1G666980 [Cucumis sativus])

HSP 1 Score: 242.3 bits (617), Expect = 9.6e-61
Identity = 122/191 (63.87%), Postives = 122/191 (63.87%), Query Frame = 0


Query: 1   MGGSKENRHTPGLEHWSIAVKDGKVLEKKWRTEVPIPRGGPHRACIVVDDRLFVIGGQEG 60
           MGGSKENRHTPGLEHWSIAVKDGKVLEKKWRTEVPIPRGGPHRACIVVDDRLFVIGGQEG
Sbjct: 218 MGGSKENRHTPGLEHWSIAVKDGKVLEKKWRTEVPIPRGGPHRACIVVDDRLFVIGGQEG 277

Query: 61  DFMAKPGSPIFKCSRRHE------------------------------------------ 120
           DFMAKPGSPIFKCSRRHE                                          
Sbjct: 278 DFMAKPGSPIFKCSRRHEVVYGDVYMLDNEKKWKTLSPMPKPDSHIEFAWVVVNNSIIIT 337

Query: 121 ---------------------------TWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRDR 123
                                      TWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRDR
Sbjct: 338 GGTTEKHPITKRMILVGEVFRFDLDSFTWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRDR 397

[Close]

BLAST of CsGy1G031820 vs. NCBI nr
Match: XP_008443768.1 (PREDICTED: kelch repeat-containing protein At3g27220-like [Cucumis melo])

HSP 1 Score: 238.4 bits (607), Expect = 1.4e-59
Identity = 120/191 (62.83%), Postives = 121/191 (63.35%), Query Frame = 0


Query: 1   MGGSKENRHTPGLEHWSIAVKDGKVLEKKWRTEVPIPRGGPHRACIVVDDRLFVIGGQEG 60
           MGGSKENRHTPGLEHWSIAVKDGKVLEKKWR EVPIPRGGPHRACIVV+DRLFVIGGQEG
Sbjct: 218 MGGSKENRHTPGLEHWSIAVKDGKVLEKKWRNEVPIPRGGPHRACIVVNDRLFVIGGQEG 277

Query: 61  DFMAKPGSPIFKCSRRHE------------------------------------------ 120
           DFMAKPGSPIFKCSRRHE                                          
Sbjct: 278 DFMAKPGSPIFKCSRRHEVVYGDVYMLDDEKKWKTLSPMPKPDSHIEFAWVVVNNSIIIT 337

Query: 121 ---------------------------TWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRDR 123
                                      TWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRDR
Sbjct: 338 GGTTEKHPITKRMILVGEVFRFDLDSFTWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRDR 397

[Close]

BLAST of CsGy1G031820 vs. NCBI nr
Match: XP_022750487.1 (kelch repeat-containing protein At3g27220-like isoform X1 [Durio zibethinus])

HSP 1 Score: 233.4 bits (594), Expect = 4.5e-58
Identity = 114/192 (59.38%), Postives = 120/192 (62.50%), Query Frame = 0


Query: 1   MGGSKENRHTPGLEHWSIAVKDGKVLEKKWRTEVPIPRGGPHRACIVVDDRLFVIGGQEG 60
           MGGSKENRHTPGLEHWSIAVKDGK LEK+WRTE+PIPRGGPHRAC+VV+DRLFVIGGQEG
Sbjct: 237 MGGSKENRHTPGLEHWSIAVKDGKALEKEWRTEIPIPRGGPHRACVVVNDRLFVIGGQEG 296

Query: 61  DFMAKPGSPIFKCSRRHE------------------------------------------ 120
           DFMAKPGSPIFKCSRRHE                                          
Sbjct: 297 DFMAKPGSPIFKCSRRHEVVYGDVYMLDAEMKKWEVLPPLPKPNSHIECSWVVVNNSIII 356

Query: 121 ----------------------------TWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRD 123
                                       TWSVIGKLPYR+KTTLAGFWDGYLYFTSGQRD
Sbjct: 357 TGGTTEKHPVSKRMILVGEVFQFHLDSLTWSVIGKLPYRVKTTLAGFWDGYLYFTSGQRD 416

[Close]

BLAST of CsGy1G031820 vs. NCBI nr
Match: EOY02702.1 (Galactose oxidase/kelch repeat superfamily protein [Theobroma cacao])

HSP 1 Score: 230.3 bits (586), Expect = 3.8e-57
Identity = 112/192 (58.33%), Postives = 119/192 (61.98%), Query Frame = 0


Query: 1   MGGSKENRHTPGLEHWSIAVKDGKVLEKKWRTEVPIPRGGPHRACIVVDDRLFVIGGQEG 60
           MGGSKENRHTPGLEHWSIAVKDGK LEK+WRTE+PIPRGGPHRAC+V +DRLFVIGGQEG
Sbjct: 238 MGGSKENRHTPGLEHWSIAVKDGKALEKEWRTEIPIPRGGPHRACVVANDRLFVIGGQEG 297

Query: 61  DFMAKPGSPIFKCSRRHE------------------------------------------ 120
           DFMAKPGSPIFKCSRRHE                                          
Sbjct: 298 DFMAKPGSPIFKCSRRHEVVYGDVYMLDAEMKKWEVLPPLPKPNSHIECAWVIVNNSIII 357

Query: 121 ----------------------------TWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRD 123
                                       TWSVIGKLP+R+KTTLAGFWDGYLYFTSGQRD
Sbjct: 358 TGGTTEKHPVTKRMILVGEVFQFHLDSLTWSVIGKLPFRVKTTLAGFWDGYLYFTSGQRD 417

[Close]

BLAST of CsGy1G031820 vs. NCBI nr
Match: XP_022988124.1 (kelch repeat-containing protein At3g27220-like [Cucurbita maxima])

HSP 1 Score: 230.3 bits (586), Expect = 3.8e-57
Identity = 115/191 (60.21%), Postives = 118/191 (61.78%), Query Frame = 0


Query: 1   MGGSKENRHTPGLEHWSIAVKDGKVLEKKWRTEVPIPRGGPHRACIVVDDRLFVIGGQEG 60
           MGGSKENRHTPGLEHWSIAVKDGKVLE KWRTE+PIPRGGPHRAC+V +DRLFVIGGQEG
Sbjct: 223 MGGSKENRHTPGLEHWSIAVKDGKVLEDKWRTEIPIPRGGPHRACVVANDRLFVIGGQEG 282

Query: 61  DFMAKPGSPIFKCSRRHE------------------------------------------ 120
           DFMAKPGSPIFKCSRR E                                          
Sbjct: 283 DFMAKPGSPIFKCSRRFEVVYGDVYMLDDEMKWKTLTPMPKPDSHIECAWVIVNNSLIIA 342

Query: 121 ---------------------------TWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRDR 123
                                      TWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRDR
Sbjct: 343 GGTTEKHPITKRMILVGEVFRFDLDTLTWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRDR 402

[Close]

BLAST of CsGy1G031820 vs. TAIR10
Match: AT1G51540.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 209.5 bits (532), Expect = 1.2e-54
Identity = 104/191 (54.45%), Postives = 113/191 (59.16%), Query Frame = 0


Query: 1   MGGSKENRHTPGLEHWSIAVKDGKVLEKKWRTEVPIPRGGPHRACIVVDDRLFVIGGQEG 60
           MGGSKENR TPGLEHWSIAVKDGK LE +WR+E+PIPRGGPHRAC+VVDDRLFVIGGQEG
Sbjct: 213 MGGSKENRFTPGLEHWSIAVKDGKSLENEWRSEIPIPRGGPHRACVVVDDRLFVIGGQEG 272

Query: 61  DFMAKPGSPIFKCSRRHET----------------------------------------- 120
           DFMAKPGSPIFKCSRR E                                          
Sbjct: 273 DFMAKPGSPIFKCSRRMEVVFSDVYMLDEEMKWKVMPPMPKPDSHIEFAWKVVNNSIVIV 332

Query: 121 ----------------------------WSVIGKLPYRIKTTLAGFWDGYLYFTSGQRDR 123
                                       W VIGKLPYR+KTTLAG+WDG LYFTSGQRD+
Sbjct: 333 GGTTEKHPETKKMVLVGEIFQFNLNTLKWYVIGKLPYRVKTTLAGYWDGQLYFTSGQRDK 392

[Close]

BLAST of CsGy1G031820 vs. TAIR10
Match: AT3G27220.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 192.2 bits (487), Expect = 2.1e-49
Identity = 96/191 (50.26%), Postives = 108/191 (56.54%), Query Frame = 0


Query: 1   MGGSKENRHTPGLEHWSIAVKDGKVLEKKWRTEVPIPRGGPHRACIVVDDRLFVIGGQEG 60
           MGGSKENR+    +HWSIAVKDGK L+ +WR EVPIPRGGPHRAC+V +D+L VIGGQEG
Sbjct: 227 MGGSKENRNAVAFDHWSIAVKDGKALD-EWREEVPIPRGGPHRACVVANDKLLVIGGQEG 286

Query: 61  DFMAKPGSPIFKCSRRHE------------------------------------------ 120
           DFMAKP SPIFKCSRR E                                          
Sbjct: 287 DFMAKPNSPIFKCSRRREIFNGEVYMMDEEMKWKMLPPMPKNNSHIESAWIIVNNSIVIV 346

Query: 121 ---------------------------TWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRDR 123
                                      TWSVIG+LPYR+KT +AGFW+GYLYFTSGQRDR
Sbjct: 347 GGTTDWHPVTKRLVLVGEIFRFQLDTLTWSVIGRLPYRVKTAMAGFWNGYLYFTSGQRDR 406

[Close]

BLAST of CsGy1G031820 vs. Swiss-Prot
Match: sp|Q9LK31|Y3272_ARATH (Kelch repeat-containing protein At3g27220 OS=Arabidopsis thaliana OX=3702 GN=At3g27220 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.7e-48
Identity = 96/191 (50.26%), Postives = 108/191 (56.54%), Query Frame = 0


Query: 1   MGGSKENRHTPGLEHWSIAVKDGKVLEKKWRTEVPIPRGGPHRACIVVDDRLFVIGGQEG 60
           MGGSKENR+    +HWSIAVKDGK L+ +WR EVPIPRGGPHRAC+V +D+L VIGGQEG
Sbjct: 227 MGGSKENRNAVAFDHWSIAVKDGKALD-EWREEVPIPRGGPHRACVVANDKLLVIGGQEG 286

Query: 61  DFMAKPGSPIFKCSRRHE------------------------------------------ 120
           DFMAKP SPIFKCSRR E                                          
Sbjct: 287 DFMAKPNSPIFKCSRRREIFNGEVYMMDEEMKWKMLPPMPKNNSHIESAWIIVNNSIVIV 346

Query: 121 ---------------------------TWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRDR 123
                                      TWSVIG+LPYR+KT +AGFW+GYLYFTSGQRDR
Sbjct: 347 GGTTDWHPVTKRLVLVGEIFRFQLDTLTWSVIGRLPYRVKTAMAGFWNGYLYFTSGQRDR 406

[Close]

BLAST of CsGy1G031820 vs. TrEMBL
Match: tr|A0A0A0M0B2|A0A0A0M0B2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G666980 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 6.3e-61
Identity = 122/191 (63.87%), Postives = 122/191 (63.87%), Query Frame = 0


Query: 1   MGGSKENRHTPGLEHWSIAVKDGKVLEKKWRTEVPIPRGGPHRACIVVDDRLFVIGGQEG 60
           MGGSKENRHTPGLEHWSIAVKDGKVLEKKWRTEVPIPRGGPHRACIVVDDRLFVIGGQEG
Sbjct: 218 MGGSKENRHTPGLEHWSIAVKDGKVLEKKWRTEVPIPRGGPHRACIVVDDRLFVIGGQEG 277

Query: 61  DFMAKPGSPIFKCSRRHE------------------------------------------ 120
           DFMAKPGSPIFKCSRRHE                                          
Sbjct: 278 DFMAKPGSPIFKCSRRHEVVYGDVYMLDNEKKWKTLSPMPKPDSHIEFAWVVVNNSIIIT 337

Query: 121 ---------------------------TWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRDR 123
                                      TWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRDR
Sbjct: 338 GGTTEKHPITKRMILVGEVFRFDLDSFTWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRDR 397

[Close]

BLAST of CsGy1G031820 vs. TrEMBL
Match: tr|A0A1S3B8V7|A0A1S3B8V7_CUCME (kelch repeat-containing protein At3g27220-like OS=Cucumis melo OX=3656 GN=LOC103487280 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 9.2e-60
Identity = 120/191 (62.83%), Postives = 121/191 (63.35%), Query Frame = 0


Query: 1   MGGSKENRHTPGLEHWSIAVKDGKVLEKKWRTEVPIPRGGPHRACIVVDDRLFVIGGQEG 60
           MGGSKENRHTPGLEHWSIAVKDGKVLEKKWR EVPIPRGGPHRACIVV+DRLFVIGGQEG
Sbjct: 218 MGGSKENRHTPGLEHWSIAVKDGKVLEKKWRNEVPIPRGGPHRACIVVNDRLFVIGGQEG 277

Query: 61  DFMAKPGSPIFKCSRRHE------------------------------------------ 120
           DFMAKPGSPIFKCSRRHE                                          
Sbjct: 278 DFMAKPGSPIFKCSRRHEVVYGDVYMLDDEKKWKTLSPMPKPDSHIEFAWVVVNNSIIIT 337

Query: 121 ---------------------------TWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRDR 123
                                      TWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRDR
Sbjct: 338 GGTTEKHPITKRMILVGEVFRFDLDSFTWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRDR 397

[Close]

BLAST of CsGy1G031820 vs. TrEMBL
Match: tr|A0A061EE92|A0A061EE92_THECC (Galactose oxidase/kelch repeat superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_017101 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.5e-57
Identity = 112/192 (58.33%), Postives = 119/192 (61.98%), Query Frame = 0


Query: 1   MGGSKENRHTPGLEHWSIAVKDGKVLEKKWRTEVPIPRGGPHRACIVVDDRLFVIGGQEG 60
           MGGSKENRHTPGLEHWSIAVKDGK LEK+WRTE+PIPRGGPHRAC+V +DRLFVIGGQEG
Sbjct: 238 MGGSKENRHTPGLEHWSIAVKDGKALEKEWRTEIPIPRGGPHRACVVANDRLFVIGGQEG 297

Query: 61  DFMAKPGSPIFKCSRRHE------------------------------------------ 120
           DFMAKPGSPIFKCSRRHE                                          
Sbjct: 298 DFMAKPGSPIFKCSRRHEVVYGDVYMLDAEMKKWEVLPPLPKPNSHIECAWVIVNNSIII 357

Query: 121 ----------------------------TWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRD 123
                                       TWSVIGKLP+R+KTTLAGFWDGYLYFTSGQRD
Sbjct: 358 TGGTTEKHPVTKRMILVGEVFQFHLDSLTWSVIGKLPFRVKTTLAGFWDGYLYFTSGQRD 417

[Close]

BLAST of CsGy1G031820 vs. TrEMBL
Match: tr|A0A2P5B966|A0A2P5B966_PARAD (BTB-kelch protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_260200 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 4.3e-57
Identity = 113/191 (59.16%), Postives = 117/191 (61.26%), Query Frame = 0


Query: 1   MGGSKENRHTPGLEHWSIAVKDGKVLEKKWRTEVPIPRGGPHRACIVVDDRLFVIGGQEG 60
           MGGSKENRHTPGLEHWSIAVKDGK LEK+WR E PIPRGGPHRACIVV DRLFVIGGQEG
Sbjct: 226 MGGSKENRHTPGLEHWSIAVKDGKALEKQWRNETPIPRGGPHRACIVVSDRLFVIGGQEG 285

Query: 61  DFMAKPGSPIFKCSRRHE------------------------------------------ 120
           DFMAKPGSPIFKCSRRHE                                          
Sbjct: 286 DFMAKPGSPIFKCSRRHEVVYSDVYMLDDEMTWKVVPPMPKPNSHIECAWVLVNNSIIIT 345

Query: 121 ---------------------------TWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRDR 123
                                      TWSVIGKLPYR+KTTLAGFWDGYLYFTSGQRDR
Sbjct: 346 GGTTEKHPVTKRMILVGEVFQFHLDSLTWSVIGKLPYRVKTTLAGFWDGYLYFTSGQRDR 405

[Close]

BLAST of CsGy1G031820 vs. TrEMBL
Match: tr|A0A1U8HQU2|A0A1U8HQU2_GOSHI (kelch repeat-containing protein At3g27220-like OS=Gossypium hirsutum OX=3635 GN=LOC107888728 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 5.6e-57
Identity = 110/192 (57.29%), Postives = 119/192 (61.98%), Query Frame = 0


Query: 1   MGGSKENRHTPGLEHWSIAVKDGKVLEKKWRTEVPIPRGGPHRACIVVDDRLFVIGGQEG 60
           MGGSKENRHTPGLEHWSIAVKDGK L+K+WRTE+PIPRGGPHRAC+ ++DRLFVIGGQEG
Sbjct: 225 MGGSKENRHTPGLEHWSIAVKDGKALDKEWRTEIPIPRGGPHRACVAINDRLFVIGGQEG 284

Query: 61  DFMAKPGSPIFKCSRRHE------------------------------------------ 120
           DFMAKPGSPIFKCSRRHE                                          
Sbjct: 285 DFMAKPGSPIFKCSRRHEVVYGDVDMLDAEMKKWEVLPPLPKPNSHIECSWVVVNNSIII 344

Query: 121 ----------------------------TWSVIGKLPYRIKTTLAGFWDGYLYFTSGQRD 123
                                       TWSVIGKLPYR+KTTLAGFWDGYLYFTSGQRD
Sbjct: 345 TGGTTEKHPETKRMILVGEVFQFHLDSLTWSVIGKLPYRVKTTLAGFWDGYLYFTSGQRD 404

The following BLAST results are available for this feature:

BLAST of CsGy1G031820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142543.1	9.6e-61	63.87	PREDICTED: kelch repeat-containing protein At3g27220-like [Cucumis sativus] >KGN...	[more]
XP_008443768.1	1.4e-59	62.83	PREDICTED: kelch repeat-containing protein At3g27220-like [Cucumis melo]	[more]
XP_022750487.1	4.5e-58	59.38	kelch repeat-containing protein At3g27220-like isoform X1 [Durio zibethinus]	[more]
EOY02702.1	3.8e-57	58.33	Galactose oxidase/kelch repeat superfamily protein [Theobroma cacao]	[more]
XP_022988124.1	3.8e-57	60.21	kelch repeat-containing protein At3g27220-like [Cucurbita maxima]	[more]

BLAST of CsGy1G031820 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G51540.1	1.2e-54	54.45	Galactose oxidase/kelch repeat superfamily protein	[more]
AT3G27220.1	2.1e-49	50.26	Galactose oxidase/kelch repeat superfamily protein	[more]

BLAST of CsGy1G031820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LK31\|Y3272_ARATH	3.7e-48	50.26	Kelch repeat-containing protein At3g27220 OS=Arabidopsis thaliana OX=3702 GN=At3...	[more]

BLAST of CsGy1G031820 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0M0B2\|A0A0A0M0B2_CUCSA	6.3e-61	63.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G666980 PE=4 SV=1	[more]
tr\|A0A1S3B8V7\|A0A1S3B8V7_CUCME	9.2e-60	62.83	kelch repeat-containing protein At3g27220-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A061EE92\|A0A061EE92_THECC	2.5e-57	58.33	Galactose oxidase/kelch repeat superfamily protein OS=Theobroma cacao OX=3641 GN...	[more]
tr\|A0A2P5B966\|A0A2P5B966_PARAD	4.3e-57	59.16	BTB-kelch protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_260200 PE=4 SV=...	[more]
tr\|A0A1U8HQU2\|A0A1U8HQU2_GOSHI	5.6e-57	57.29	kelch repeat-containing protein At3g27220-like OS=Gossypium hirsutum OX=3635 GN=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR015915	Kelch-typ_b-propeller

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G031820.1	CsGy1G031820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015915	Kelch-type beta propeller	GENE3D	G3DSA:2.120.10.80		coord: 1..122 e-value: 2.3E-7 score: 31.9
IPR015915	Kelch-type beta propeller	SUPERFAMILY	SSF117281	Kelch motif	coord: 28..110
None	No IPR available	PANTHER	PTHR24413	FAMILY NOT NAMED	coord: 1..78
None	No IPR available	PANTHER	PTHR24413:SF111	SUBFAMILY NOT NAMED	coord: 1..78
None	No IPR available	PANTHER	PTHR24413:SF111	SUBFAMILY NOT NAMED	coord: 79..122
None	No IPR available	PANTHER	PTHR24413	FAMILY NOT NAMED	coord: 79..122

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G031820	Cla003508	Watermelon (97103) v1	cgybwmB021
CsGy1G031820	Csa1G666980	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G031820	MELO3C010135	Melon (DHL92) v3.5.1	cgybmeB040
CsGy1G031820	CSPI01G33030	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G031820	CmaCh10G010210	Cucurbita maxima (Rimu)	cgybcmaB019
CsGy1G031820	CmoCh10G010780	Cucurbita moschata (Rifu)	cgybcmoB018
CsGy1G031820	Cp4.1LG05g08370	Cucurbita pepo (Zucchini)	cgybcpeB135
CsGy1G031820	MELO3C010135.2	Melon (DHL92) v3.6.1	cgybmedB034
CsGy1G031820	Bhi02G001050	Wax gourd	cgybwgoB113

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G031820	Cucurbita maxima (Rimu)	cgybcmaB027
CsGy1G031820	Cucurbita moschata (Rifu)	cgybcmoB027
CsGy1G031820	Cucurbita pepo (Zucchini)	cgybcpeB112
CsGy1G031820	Bottle gourd (USVL1VR-Ls)	cgyblsiB055
CsGy1G031820	Silver-seed gourd	carcgybB0899
CsGy1G031820	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G031820	Wax gourd	cgybwgoB100