CsGy1G030610 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G030610
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	AAR2 family protein
Location	Chr1 : 28989318 .. 28991602 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTACTTCCGTTAAATTTGGCGTGTATCCTAATCTTTTTAAAGAAAAGAAAAACATGGTTGAAACATATCAGTATCTTAGCATTTGGAGGAAATAAAAAAGCGACCGTTAGCAAATAATTTTGTACTAAATTTATTTGAAAATAGGAGTATAGAAAGTTTCTTGAGGCTTCTGGACGACAAATTCCATTGCCTTCTTTTATTTCTCACTTTCAGGAGAGAGACCGACAAGAGAAATCACGGAGACCCGCCATAATCTTTTTGGAAAGAACAAGAGGCATTGAAACTCCAATTTTCGTTTCTGTTGTGTGTTCTGAAGTTGAAATGGATCCTGAAACTGCCCTAGAGCTTGTAAAGCATGGTGTGACAGTTCTCCTCCTCGATGTTCCTCAGTACACCCTCGTTGGAATTGATACTCAGGTTAATCACGTATATGGGATCTTTCTCCTTTTTCGTTTTTCTTTCGAGAAACTGAAGCGCAGGAATAGGTTTTTCAGTCATTCTATACTATGTTACTAGCTGCTGTTTCTGCTACTGGGTGAAATTTGTACGGCAATGTTTGATTCTATTGAATTTGAATGTTGATTTGTGATGAACAAATAGTTGATTCAATGTTACGTTTACTTCTCCATTTCCACCATTTTTGTCTGAAATTGGTTGAAATCTCCATGGTTTATGTTTCCCTCGTGAACTCCTATCATTTTAGCTGAAAACTGGCCAAAACAACTGTTCATCTTTGGACTTGTCGGTAGAAAAAGCCACATTATGAGCTGAATTCATGGATTTTTAGCGGCTAGGACTTATGATAGTATATTTATTGATATTGTTTTCAATGAATGATATCATAAGCTGATATCGTTATATCATACTGGATTCCCATCATTTTGAGAATGAATTGCCCAAAACCACTGCATACTTTTTGTTTGGCTAGCTGAAAAGCCGCACCATGAGCTGATTTTATAATTTTAAACACCAATACTTATAATTTTCTCGACTAAATTCTGTTTCAATGTTTATTTCTGCTGCTAGTCAGTGTTATTCTCACCAGTCACCATGAATGAAGTTTTGGTTTTTGCCTTTTGATCATTCAATGGTAGGCTAAATTATATTCTAAAATGGAACATTGAAATTTGAAATAGCTTCAGTTTTATTTTGATAAATTTGGAGTAAATATTGCGCTCAAATAATTTGATTTAATTTATTTAGAGTGACTAATTAGTTGTTTCTCTTCTAAAGATGTTCTCTGTAGGGCCTTCTTTCAAGGGTATAAAGATGATTCCTCCAGGACCTCATTTCCTGTATTACAGCTCATCGAGCAGGTGTTGTATTATTAATCAAGTTCTGTAGATATATCTATTGCATTTTGGCAGACTAATACATAACACTCTGTATGTTCGTATTAATTCAGTTCTCATAGAGAGGTCATGTCATATGATGATGCATAATACATTTTTATTATTACCGCTCATATCTTACATTTTGGTTCTCTCTTTCTCCTTTTTTTTTTTTCTTTTTAAAGTTGTCCATAATTGCTTGTCAAAGTGAGTTGGCTCAATGGTATTGGGATGATTTTTGTCTCTAGAGGTTGGAAGTTCAATCCCCCACCTTGCAGTCGTTGTACTAAAATGAGAATTAATTTATCTCTATACTTTGTTTTAAAGATTACTTAGTTTTGTGAGTTGTGTCTAAATTTATTCTATTATTTTCCTGTGTAGAGATGGCAGAGAGTTTTCACCAATTACTGGCTTTTTCGTAGACGCTGGTCCCTCTGAGGTTTGACTTCTCACATACTTTAGATATTTTACTTGGTATAAAATGATGATAGTCACATGATAATCATCTTTTAAGAATGGAGTAATTGTGTTCTTGAACATCCTTTTAAAAGTTTTGGAAAAGTAAGTTTCTAATCAAATAAATCCAGTCTATGGATGAGTATTAAGACAGCTGGCAAATTTAAAACATTTCCTCGAATGTCTCTCACTTCTAATTGCATTCTAATGGATGTTGAGGAAGAACATTTTATGCTTTAGTTTTTTTTATAGGAGGTTTTTTTAAGATCCATAGATGATAGAAAAGTTTAGGTTCCTTTCTTGTGAAGTCTATAATAAAAAATCTTATTAACAGTTCTTGAATGCCTTCTTCAATTAGAAAATAACCTCACTGAAAATTGAGTTCCTAACCGAACTGATAACATTATTGTGCCTTCTGATTTCAGAAGACAGAGCAAAATCTTACTTCACTGTTCATATTTGTATCATCATTGGAGTGCCCTTTTCTGTCATCTTAA

mRNA sequence

TGTACTTCCGTTAAATTTGGCGTGTATCCTAATCTTTTTAAAGAAAAGAAAAACATGGTTGAAACATATCAGTATCTTAGCATTTGGAGGAAATAAAAAAGCGACCGTTAGCAAATAATTTTGTACTAAATTTATTTGAAAATAGGAGTATAGAAAGTTTCTTGAGGCTTCTGGACGACAAATTCCATTGCCTTCTTTTATTTCTCACTTTCAGGAGAGAGACCGACAAGAGAAATCACGGAGACCCGCCATAATCTTTTTGGAAAGAACAAGAGGCATTGAAACTCCAATTTTCGTTTCTGTTGTGTGTTCTGAAGTTGAAATGGATCCTGAAACTGCCCTAGAGCTTGTAAAGCATGGTGTGACAGTTCTCCTCCTCGATGTTCCTCAGTACACCCTCGTTGGAATTGATACTCAGATGTTCTCTGTAGGGCCTTCTTTCAAGGGTATAAAGATGATTCCTCCAGGACCTCATTTCCTGTATTACAGCTCATCGAGCAGAGATGGCAGAGAGTTTTCACCAATTACTGGCTTTTTCGTAGACGCTGGTCCCTCTGAGAAGACAGAGCAAAATCTTACTTCACTGTTCATATTTGTATCATCATTGGAGTGCCCTTTTCTGTCATCTTAA

Coding sequence (CDS)

ATGGATCCTGAAACTGCCCTAGAGCTTGTAAAGCATGGTGTGACAGTTCTCCTCCTCGATGTTCCTCAGTACACCCTCGTTGGAATTGATACTCAGATGTTCTCTGTAGGGCCTTCTTTCAAGGGTATAAAGATGATTCCTCCAGGACCTCATTTCCTGTATTACAGCTCATCGAGCAGAGATGGCAGAGAGTTTTCACCAATTACTGGCTTTTTCGTAGACGCTGGTCCCTCTGAGAAGACAGAGCAAAATCTTACTTCACTGTTCATATTTGTATCATCATTGGAGTGCCCTTTTCTGTCATCTTAA

Protein sequence

MDPETALELVKHGVTVLLLDVPQYTLVGIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSRDGREFSPITGFFVDAGPSEKTEQNLTSLFIFVSSLECPFLSS

Homology

[Close]

BLAST of CsGy1G030610 vs. NCBI nr
Match: XP_008457081.1 (PREDICTED: protein AAR2 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 161.8 bits (408), Expect = 1.3e-36
Identity = 77/79 (97.47%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MDPETALELVKHGVTVLLLDVPQYTLVGIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR 60
          MDPETALELVKHGVT+LLLDVPQYTLVGIDTQMFS GPSFKGIKMIPPGPHFLYYSSSSR
Sbjct: 1  MDPETALELVKHGVTILLLDVPQYTLVGIDTQMFSAGPSFKGIKMIPPGPHFLYYSSSSR 60

Query: 61 DGREFSPITGFFVDAGPSE 80
          DGREFSPITGFFVDAGPSE
Sbjct: 61 DGREFSPITGFFVDAGPSE 79

[Close]

BLAST of CsGy1G030610 vs. NCBI nr
Match: XP_008457082.1 (PREDICTED: protein AAR2 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 161.8 bits (408), Expect = 1.3e-36
Identity = 77/79 (97.47%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MDPETALELVKHGVTVLLLDVPQYTLVGIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR 60
          MDPETALELVKHGVT+LLLDVPQYTLVGIDTQMFS GPSFKGIKMIPPGPHFLYYSSSSR
Sbjct: 1  MDPETALELVKHGVTILLLDVPQYTLVGIDTQMFSAGPSFKGIKMIPPGPHFLYYSSSSR 60

Query: 61 DGREFSPITGFFVDAGPSE 80
          DGREFSPITGFFVDAGPSE
Sbjct: 61 DGREFSPITGFFVDAGPSE 79

[Close]

BLAST of CsGy1G030610 vs. NCBI nr
Match: KGN66587.1 (hypothetical protein Csa_1G633380 [Cucumis sativus])

HSP 1 Score: 161.4 bits (407), Expect = 1.6e-36
Identity = 77/79 (97.47%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MDPETALELVKHGVTVLLLDVPQYTLVGIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR 60
          MDPET+LELVKHGVTVLLLDVPQYTL+GIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR
Sbjct: 1  MDPETSLELVKHGVTVLLLDVPQYTLLGIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR 60

Query: 61 DGREFSPITGFFVDAGPSE 80
          DGREFSPITGFFVDAGPSE
Sbjct: 61 DGREFSPITGFFVDAGPSE 79

[Close]

BLAST of CsGy1G030610 vs. NCBI nr
Match: XP_011660184.1 (PREDICTED: protein AAR2 homolog [Cucumis sativus])

HSP 1 Score: 161.4 bits (407), Expect = 1.6e-36
Identity = 77/79 (97.47%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MDPETALELVKHGVTVLLLDVPQYTLVGIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR 60
          MDPET+LELVKHGVTVLLLDVPQYTL+GIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR
Sbjct: 1  MDPETSLELVKHGVTVLLLDVPQYTLLGIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR 60

Query: 61 DGREFSPITGFFVDAGPSE 80
          DGREFSPITGFFVDAGPSE
Sbjct: 61 DGREFSPITGFFVDAGPSE 79

[Close]

BLAST of CsGy1G030610 vs. NCBI nr
Match: XP_022983356.1 (protein AAR2 homolog [Cucurbita maxima] >XP_022983357.1 protein AAR2 homolog [Cucurbita maxima])

HSP 1 Score: 155.6 bits (392), Expect = 9.0e-35
Identity = 73/79 (92.41%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 1  MDPETALELVKHGVTVLLLDVPQYTLVGIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR 60
          MDPETAL+LVKHG T+LLLDVPQYTL+GIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR
Sbjct: 10 MDPETALQLVKHGATILLLDVPQYTLIGIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR 69

Query: 61 DGREFSPITGFFVDAGPSE 80
          +GREFSPITGFFVDAG SE
Sbjct: 70 EGREFSPITGFFVDAGSSE 88

[Close]

BLAST of CsGy1G030610 vs. TAIR10
Match: AT1G66510.1 (AAR2 protein family)

HSP 1 Score: 133.3 bits (334), Expect = 8.7e-32
Identity = 62/79 (78.48%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MDPETALELVKHGVTVLLLDVPQYTLVGIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR 60
          MD E ALELVKHG T+L LDVPQYTLVGIDTQ+F+VGP+FKGIKMIPPG HF++YSSS+R
Sbjct: 1  MDSEKALELVKHGATLLFLDVPQYTLVGIDTQIFAVGPAFKGIKMIPPGIHFVFYSSSTR 60

Query: 61 DGREFSPITGFFVDAGPSE 80
          DGREFSP  GFFVD  PS+
Sbjct: 61 DGREFSPTIGFFVDVAPSQ 79

[Close]

BLAST of CsGy1G030610 vs. Swiss-Prot
Match: sp|Q9D2V5|AAR2_MOUSE (Protein AAR2 homolog OS=Mus musculus OX=10090 GN=Aar2 PE=1 SV=3)

HSP 1 Score: 78.6 bits (192), Expect = 4.6e-14
Identity = 39/74 (52.70%), Postives = 51/74 (68.92%), Query Frame = 0


Query: 1  MDPETALELVKHGVTVLLLDVPQYTLVGIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR 60
          MDPE A +L   G TV++L++P+ T  GID   + VGP F+G+KMIPPG HFLYYSS  +
Sbjct: 6  MDPELAKQLFFEGATVVILNMPKGTEFGIDYNSWEVGPKFRGVKMIPPGIHFLYYSSVDK 65

Query: 61 -DGREFSPITGFFV 74
           + RE  P  GFF+
Sbjct: 66 ANPREVGPRMGFFL 79

[Close]

BLAST of CsGy1G030610 vs. Swiss-Prot
Match: sp|Q4R7D0|AAR2_MACFA (Protein AAR2 homolog OS=Macaca fascicularis OX=9541 GN=AAR2 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-13
Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 0


Query: 1  MDPETALELVKHGVTVLLLDVPQYTLVGIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR 60
          MDPE A  L   G TV++L++P+ T  GID   + VGP F+G+KMIPPG HFLYYSS  +
Sbjct: 6  MDPELAKRLFFEGATVVILNMPKGTEFGIDCNSWEVGPKFRGVKMIPPGIHFLYYSSVDK 65

Query: 61 -DGREFSPITGFFV 74
           + +E  P  GFF+
Sbjct: 66 ANPKEVGPRMGFFL 79

[Close]

BLAST of CsGy1G030610 vs. Swiss-Prot
Match: sp|Q08DJ7|AAR2_BOVIN (Protein AAR2 homolog OS=Bos taurus OX=9913 GN=AAR2 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.0e-13
Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 0


Query: 1  MDPETALELVKHGVTVLLLDVPQYTLVGIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR 60
          MDPE A  L   G TV++L++P+ T  GID   + VGP F+G+KMIPPG HFL+YSS  +
Sbjct: 6  MDPELARRLFFEGATVVILNMPKGTEFGIDYNSWEVGPKFRGVKMIPPGIHFLHYSSVDK 65

Query: 61 -DGREFSPITGFFVD 75
           + RE  P  GFF++
Sbjct: 66 ANPREVGPRMGFFLN 80

[Close]

BLAST of CsGy1G030610 vs. Swiss-Prot
Match: sp|Q9Y312|AAR2_HUMAN (Protein AAR2 homolog OS=Homo sapiens OX=9606 GN=AAR2 PE=1 SV=2)

HSP 1 Score: 74.7 bits (182), Expect = 6.6e-13
Identity = 37/74 (50.00%), Postives = 50/74 (67.57%), Query Frame = 0


Query: 1  MDPETALELVKHGVTVLLLDVPQYTLVGIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR 60
          MDPE A  L   G TV++L++P+ T  GID   + VGP F+G+KMIPPG HFL+YSS  +
Sbjct: 6  MDPELAKRLFFEGATVVILNMPKGTEFGIDYNSWEVGPKFRGVKMIPPGIHFLHYSSVDK 65

Query: 61 -DGREFSPITGFFV 74
           + +E  P  GFF+
Sbjct: 66 ANPKEVGPRMGFFL 79

[Close]

BLAST of CsGy1G030610 vs. Swiss-Prot
Match: sp|Q5R5N9|AAR2_PONAB (Protein AAR2 homolog OS=Pongo abelii OX=9601 GN=AAR2 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 3.3e-12
Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 0


Query: 1  MDPETALELVKHGVTVLLLDVPQYTLVGIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR 60
          MDPE A  L   G TV++L++P+ T  GID   + VGP F+G+K IPPG HFL+YSS  +
Sbjct: 6  MDPELAKRLFFEGATVVILNMPRGTEFGIDYNSWEVGPKFRGVKTIPPGIHFLHYSSVDK 65

Query: 61 -DGREFSPITGFFV 74
           + +E  P  GFF+
Sbjct: 66 ANPKEVGPRMGFFL 79

[Close]

BLAST of CsGy1G030610 vs. TrEMBL
Match: tr|A0A1S3C5Z9|A0A1S3C5Z9_CUCME (protein AAR2 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496849 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.3e-37
Identity = 77/79 (97.47%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MDPETALELVKHGVTVLLLDVPQYTLVGIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR 60
          MDPETALELVKHGVT+LLLDVPQYTLVGIDTQMFS GPSFKGIKMIPPGPHFLYYSSSSR
Sbjct: 1  MDPETALELVKHGVTILLLDVPQYTLVGIDTQMFSAGPSFKGIKMIPPGPHFLYYSSSSR 60

Query: 61 DGREFSPITGFFVDAGPSE 80
          DGREFSPITGFFVDAGPSE
Sbjct: 61 DGREFSPITGFFVDAGPSE 79

[Close]

BLAST of CsGy1G030610 vs. TrEMBL
Match: tr|A0A1S3C5D7|A0A1S3C5D7_CUCME (protein AAR2 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496849 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.3e-37
Identity = 77/79 (97.47%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MDPETALELVKHGVTVLLLDVPQYTLVGIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR 60
          MDPETALELVKHGVT+LLLDVPQYTLVGIDTQMFS GPSFKGIKMIPPGPHFLYYSSSSR
Sbjct: 1  MDPETALELVKHGVTILLLDVPQYTLVGIDTQMFSAGPSFKGIKMIPPGPHFLYYSSSSR 60

Query: 61 DGREFSPITGFFVDAGPSE 80
          DGREFSPITGFFVDAGPSE
Sbjct: 61 DGREFSPITGFFVDAGPSE 79

[Close]

BLAST of CsGy1G030610 vs. TrEMBL
Match: tr|A0A0A0M0D1|A0A0A0M0D1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G633380 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-36
Identity = 77/79 (97.47%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MDPETALELVKHGVTVLLLDVPQYTLVGIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR 60
          MDPET+LELVKHGVTVLLLDVPQYTL+GIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR
Sbjct: 1  MDPETSLELVKHGVTVLLLDVPQYTLLGIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR 60

Query: 61 DGREFSPITGFFVDAGPSE 80
          DGREFSPITGFFVDAGPSE
Sbjct: 61 DGREFSPITGFFVDAGPSE 79

[Close]

BLAST of CsGy1G030610 vs. TrEMBL
Match: tr|I1M859|I1M859_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100778021 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-32
Identity = 69/79 (87.34%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 1  MDPETALELVKHGVTVLLLDVPQYTLVGIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR 60
          MDPETALELVKHGVT+LLLDVPQYTLV +DTQMFSVGP+FKGIKMIPPG HF+YYSSSSR
Sbjct: 1  MDPETALELVKHGVTLLLLDVPQYTLVAVDTQMFSVGPAFKGIKMIPPGVHFVYYSSSSR 60

Query: 61 DGREFSPITGFFVDAGPSE 80
          DG+EFS I GFF+DAGPSE
Sbjct: 61 DGKEFSSIIGFFIDAGPSE 79

[Close]

BLAST of CsGy1G030610 vs. TrEMBL
Match: tr|A0A0R0GK66|A0A0R0GK66_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100778021 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-32
Identity = 69/79 (87.34%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 1  MDPETALELVKHGVTVLLLDVPQYTLVGIDTQMFSVGPSFKGIKMIPPGPHFLYYSSSSR 60
          MDPETALELVKHGVT+LLLDVPQYTLV +DTQMFSVGP+FKGIKMIPPG HF+YYSSSSR
Sbjct: 1  MDPETALELVKHGVTLLLLDVPQYTLVAVDTQMFSVGPAFKGIKMIPPGVHFVYYSSSSR 60

Query: 61 DGREFSPITGFFVDAGPSE 80
          DG+EFS I GFF+DAGPSE
Sbjct: 61 DGKEFSSIIGFFIDAGPSE 79

The following BLAST results are available for this feature:

BLAST of CsGy1G030610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457081.1	1.3e-36	97.47	PREDICTED: protein AAR2 homolog isoform X1 [Cucumis melo]	[more]
XP_008457082.1	1.3e-36	97.47	PREDICTED: protein AAR2 homolog isoform X2 [Cucumis melo]	[more]
KGN66587.1	1.6e-36	97.47	hypothetical protein Csa_1G633380 [Cucumis sativus]	[more]
XP_011660184.1	1.6e-36	97.47	PREDICTED: protein AAR2 homolog [Cucumis sativus]	[more]
XP_022983356.1	9.0e-35	92.41	protein AAR2 homolog [Cucurbita maxima] >XP_022983357.1 protein AAR2 homolog [Cu...	[more]

BLAST of CsGy1G030610 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G66510.1	8.7e-32	78.48	AAR2 protein family	[more]

BLAST of CsGy1G030610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9D2V5\|AAR2_MOUSE	4.6e-14	52.70	Protein AAR2 homolog OS=Mus musculus OX=10090 GN=Aar2 PE=1 SV=3	[more]
sp\|Q4R7D0\|AAR2_MACFA	1.3e-13	51.35	Protein AAR2 homolog OS=Macaca fascicularis OX=9541 GN=AAR2 PE=2 SV=1	[more]
sp\|Q08DJ7\|AAR2_BOVIN	3.0e-13	50.67	Protein AAR2 homolog OS=Bos taurus OX=9913 GN=AAR2 PE=2 SV=1	[more]
sp\|Q9Y312\|AAR2_HUMAN	6.6e-13	50.00	Protein AAR2 homolog OS=Homo sapiens OX=9606 GN=AAR2 PE=1 SV=2	[more]
sp\|Q5R5N9\|AAR2_PONAB	3.3e-12	48.65	Protein AAR2 homolog OS=Pongo abelii OX=9601 GN=AAR2 PE=2 SV=1	[more]

BLAST of CsGy1G030610 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C5Z9\|A0A1S3C5Z9_CUCME	8.3e-37	97.47	protein AAR2 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496849 PE=4 SV=...	[more]
tr\|A0A1S3C5D7\|A0A1S3C5D7_CUCME	8.3e-37	97.47	protein AAR2 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496849 PE=4 SV=...	[more]
tr\|A0A0A0M0D1\|A0A0A0M0D1_CUCSA	1.1e-36	97.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G633380 PE=4 SV=1	[more]
tr\|I1M859\|I1M859_SOYBN	2.1e-32	87.34	Uncharacterized protein OS=Glycine max OX=3847 GN=100778021 PE=4 SV=1	[more]
tr\|A0A0R0GK66\|A0A0R0GK66_SOYBN	2.1e-32	87.34	Uncharacterized protein OS=Glycine max OX=3847 GN=100778021 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR033647	Aar2_N
IPR038516	AAR2_N_sf
IPR007946	AAR2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000244	spliceosomal tri-snRNP complex assembly
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G030610.1	CsGy1G030610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007946	A1 cistron-splicing factor, AAR2	PFAM	PF05282	AAR2	coord: 13..79 e-value: 3.2E-24 score: 85.9
IPR007946	A1 cistron-splicing factor, AAR2	PANTHER	PTHR12689	A1 CISTRON SPLICING FACTOR AAR2-RELATED	coord: 1..79
IPR038516	AAR2, N-terminal domain superfamily	GENE3D	G3DSA:2.60.34.20		coord: 14..77 e-value: 2.7E-6 score: 29.4
IPR033647	AAR2, N-terminal	CDD	cd13777	Aar2_N	coord: 15..79 e-value: 6.17867E-26 score: 93.8949

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G030610	Cucurbita moschata (Rifu)	cgybcmoB013
CsGy1G030610	Cucurbita moschata (Rifu)	cgybcmoB027
CsGy1G030610	Cucurbita moschata (Rifu)	cgybcmoB110
CsGy1G030610	Cucurbita pepo (Zucchini)	cgybcpeB039
CsGy1G030610	Cucurbita pepo (Zucchini)	cgybcpeB125
CsGy1G030610	Cucurbita pepo (Zucchini)	cgybcpeB137
CsGy1G030610	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G030610	Bottle gourd (USVL1VR-Ls)	cgyblsiB055
CsGy1G030610	Bottle gourd (USVL1VR-Ls)	cgyblsiB072
CsGy1G030610	Melon (DHL92) v3.5.1	cgybmeB038
CsGy1G030610	Melon (DHL92) v3.6.1	cgybmedB032
CsGy1G030610	Watermelon (Charleston Gray)	cgybwcgB041
CsGy1G030610	Watermelon (Charleston Gray)	cgybwcgB043
CsGy1G030610	Watermelon (97103) v1	cgybwmB019
CsGy1G030610	Watermelon (97103) v1	cgybwmB018
CsGy1G030610	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G030610	Silver-seed gourd	carcgybB0542
CsGy1G030610	Silver-seed gourd	carcgybB0905
CsGy1G030610	Silver-seed gourd	carcgybB0955
CsGy1G030610	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G030610	Watermelon (97103) v2	cgybwmbB039
CsGy1G030610	Watermelon (97103) v2	cgybwmbB046
CsGy1G030610	Wax gourd	cgybwgoB094
CsGy1G030610	Cucurbita maxima (Rimu)	cgybcmaB013
CsGy1G030610	Cucurbita maxima (Rimu)	cgybcmaB027
CsGy1G030610	Cucurbita maxima (Rimu)	cgybcmaB120