CsGy1G029620 (gene) Cucumber (Gy14) v2

NameCsGy1G029620
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptioncytochrome c-type biogenesis protein CcmE
LocationChr1 : 27709568 .. 27710347 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTACAAATCTTGCTCTCCGACTCCGATCACGCCTCCTTTTGCAATCTTCATCTCGTTTCCGCACCACTTTTCATCAATTTCAATCCCCCCACATCCCCAAATCTTCCCCTCTCATCACCTCTGCACTTTCCGATCTTCGTCGAATTCCCAATAACCCCATCTTCAATCTCTCTGGATTTCGCTTCTTCTCAACTGCACGGCGGAATCTGACCCGTCCCAAGCACGTCGATATCGGAGCTCGTGCCAGGCAACTCCAGACGCGGCGGCTCTGGACCTACGCTCTGACTTTCAGCTGCATCGCGGGATTTGTCGTCATCGTTCTCAGTAATTTTCAAGAGCATCTGATGTTCTATGTGACACCCACCGATGCGCTGGAGAAATTCTCTGCGAATCCCTCAAAGAACAAGTTTCGTCTCGGTGGTTTGGTACTTGAAGGCAGTGTAACGCATCCAGCATCGTCTTCTCAGATGGAGTTTGTGATAACGGATTTGATTACTGATATGTTGGTTCGACATCAAGGGTCGTTGCCGGATTTGTTTAGAGAGGGGCATTCGGTGGTGGTGGAAGGTTTCCTTAAGCCATTTACCGATGAGATAAGGAATGAGATCTCTACGAAGAGTGTTTCGGGAAAAGCGAGAAGTGAGAAATATTATTTTTCGGCTATTGAGGTTTTGGCAAAGCATGATGAGAAGTATATGCCGGCGGAGGTTGCGGCGGCAATAGAGAAGAACAGGAAGAAGATCGAGGAAGGAGAATTGGGGGTGAACCACGCTTGA

mRNA sequence

ATGGCTACAAATCTTGCTCTCCGACTCCGATCACGCCTCCTTTTGCAATCTTCATCTCGTTTCCGCACCACTTTTCATCAATTTCAATCCCCCCACATCCCCAAATCTTCCCCTCTCATCACCTCTGCACTTTCCGATCTTCGTCGAATTCCCAATAACCCCATCTTCAATCTCTCTGGATTTCGCTTCTTCTCAACTGCACGGCGGAATCTGACCCGTCCCAAGCACGTCGATATCGGAGCTCGTGCCAGGCAACTCCAGACGCGGCGGCTCTGGACCTACGCTCTGACTTTCAGCTGCATCGCGGGATTTGTCGTCATCGTTCTCAGTAATTTTCAAGAGCATCTGATGTTCTATGTGACACCCACCGATGCGCTGGAGAAATTCTCTGCGAATCCCTCAAAGAACAAGTTTCGTCTCGGTGGTTTGGTACTTGAAGGCAGTGTAACGCATCCAGCATCGTCTTCTCAGATGGAGTTTGTGATAACGGATTTGATTACTGATATGTTGGTTCGACATCAAGGGTCGTTGCCGGATTTGTTTAGAGAGGGGCATTCGGTGGTGGTGGAAGGTTTCCTTAAGCCATTTACCGATGAGATAAGGAATGAGATCTCTACGAAGAGTGTTTCGGGAAAAGCGAGAAGTGAGAAATATTATTTTTCGGCTATTGAGGTTTTGGCAAAGCATGATGAGAAGTATATGCCGGCGGAGGTTGCGGCGGCAATAGAGAAGAACAGGAAGAAGATCGAGGAAGGAGAATTGGGGGTGAACCACGCTTGA

Coding sequence (CDS)

ATGGCTACAAATCTTGCTCTCCGACTCCGATCACGCCTCCTTTTGCAATCTTCATCTCGTTTCCGCACCACTTTTCATCAATTTCAATCCCCCCACATCCCCAAATCTTCCCCTCTCATCACCTCTGCACTTTCCGATCTTCGTCGAATTCCCAATAACCCCATCTTCAATCTCTCTGGATTTCGCTTCTTCTCAACTGCACGGCGGAATCTGACCCGTCCCAAGCACGTCGATATCGGAGCTCGTGCCAGGCAACTCCAGACGCGGCGGCTCTGGACCTACGCTCTGACTTTCAGCTGCATCGCGGGATTTGTCGTCATCGTTCTCAGTAATTTTCAAGAGCATCTGATGTTCTATGTGACACCCACCGATGCGCTGGAGAAATTCTCTGCGAATCCCTCAAAGAACAAGTTTCGTCTCGGTGGTTTGGTACTTGAAGGCAGTGTAACGCATCCAGCATCGTCTTCTCAGATGGAGTTTGTGATAACGGATTTGATTACTGATATGTTGGTTCGACATCAAGGGTCGTTGCCGGATTTGTTTAGAGAGGGGCATTCGGTGGTGGTGGAAGGTTTCCTTAAGCCATTTACCGATGAGATAAGGAATGAGATCTCTACGAAGAGTGTTTCGGGAAAAGCGAGAAGTGAGAAATATTATTTTTCGGCTATTGAGGTTTTGGCAAAGCATGATGAGAAGTATATGCCGGCGGAGGTTGCGGCGGCAATAGAGAAGAACAGGAAGAAGATCGAGGAAGGAGAATTGGGGGTGAACCACGCTTGA

Protein sequence

MATNLALRLRSRLLLQSSSRFRTTFHQFQSPHIPKSSPLITSALSDLRRIPNNPIFNLSGFRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYVTPTDALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDLFREGHSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAAAIEKNRKKIEEGELGVNHA
BLAST of CsGy1G029620 vs. NCBI nr
Match: XP_004139025.1 (PREDICTED: uncharacterized protein LOC101211081 [Cucumis sativus] >KGN66477.1 hypothetical protein Csa_1G613490 [Cucumis sativus])

HSP 1 Score: 505.4 bits (1300), Expect = 1.2e-139
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0

Query: 1   MATNLALRLRSRLLLQSSSRFRTTFHQFQSPHIPKSSPLITSALSDLRRIPNNPIFNLSG 60
           MATNLALRLRSRLLLQSSSRFRTTFHQFQSPHIPKSSPLITSALSDLRRIPNNPIFNLSG
Sbjct: 1   MATNLALRLRSRLLLQSSSRFRTTFHQFQSPHIPKSSPLITSALSDLRRIPNNPIFNLSG 60

Query: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120
           FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV
Sbjct: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120

Query: 121 TPTDALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180
           TPTDALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL
Sbjct: 121 TPTDALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAA 240
           FREGHSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNRKKIEEGELGVNHA 260
           AIEKNRKKIEEGELGVNHA
Sbjct: 241 AIEKNRKKIEEGELGVNHA 259

BLAST of CsGy1G029620 vs. NCBI nr
Match: XP_008450439.1 (PREDICTED: cytochrome c-type biogenesis protein CcmE [Cucumis melo])

HSP 1 Score: 492.3 bits (1266), Expect = 1.0e-135
Identity = 252/259 (97.30%), Postives = 255/259 (98.46%), Query Frame = 0

Query: 1   MATNLALRLRSRLLLQSSSRFRTTFHQFQSPHIPKSSPLITSALSDLRRIPNNPIFNLSG 60
           MATNLA RLRSRLLLQSSSRFRTTFHQ QSPHIPKSSPLI+SALSDLRRIP+NPIFNLSG
Sbjct: 1   MATNLAFRLRSRLLLQSSSRFRTTFHQIQSPHIPKSSPLISSALSDLRRIPDNPIFNLSG 60

Query: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120
           FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV
Sbjct: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120

Query: 121 TPTDALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180
           TPTDALEKFSANP+KNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL
Sbjct: 121 TPTDALEKFSANPAKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAA 240
           FREGHSVVVEGFLKPFTDEIRNEISTKSVS KARSEKYYFSAIEVLAKHDEKYMPAEV A
Sbjct: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSEKARSEKYYFSAIEVLAKHDEKYMPAEVGA 240

Query: 241 AIEKNRKKIEEGELGVNHA 260
           AIEKNRKKIEEGELGVNHA
Sbjct: 241 AIEKNRKKIEEGELGVNHA 259

BLAST of CsGy1G029620 vs. NCBI nr
Match: XP_022960773.1 (uncharacterized protein LOC111461474 [Cucurbita moschata])

HSP 1 Score: 433.7 bits (1114), Expect = 4.3e-118
Identity = 219/259 (84.56%), Postives = 238/259 (91.89%), Query Frame = 0

Query: 1   MATNLALRLRSRLLLQSSSRFRTTFHQFQSPHIPKSSPLITSALSDLRRIPNNPIFNLSG 60
           MA+NLA RLRS LLL+SS RF  T +  QS  IPKS PLI+SALSDLRR+P   +FNLSG
Sbjct: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSAIPKSPPLISSALSDLRRLPKETVFNLSG 60

Query: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120
           FRF STARRN TRPK VDIGARARQLQTRRLWTYALTFSCIAGF+VI+L+NF+EHL+FYV
Sbjct: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIILNNFEEHLLFYV 120

Query: 121 TPTDALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180
           TPTDALEK+SANPSKNKFRLGGLVLEGSV HPASSSQMEFVITDL+TD+LVRHQGSLPDL
Sbjct: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAA 240
           FREGHSVV EGF+KPFTD+IRNE+STKSVSGKARS +YYFSA EVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVAEGFIKPFTDDIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNRKKIEEGELGVNHA 260
           AIEKN+KKIEEGELGVNHA
Sbjct: 241 AIEKNKKKIEEGELGVNHA 259

BLAST of CsGy1G029620 vs. NCBI nr
Match: XP_023515457.1 (uncharacterized protein LOC111779609 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 433.0 bits (1112), Expect = 7.4e-118
Identity = 219/259 (84.56%), Postives = 236/259 (91.12%), Query Frame = 0

Query: 1   MATNLALRLRSRLLLQSSSRFRTTFHQFQSPHIPKSSPLITSALSDLRRIPNNPIFNLSG 60
           MA+NLA RLRS LLL+SS RF  T +  QS  IPKS PLI SALSDLRR+P   +FNLSG
Sbjct: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSAIPKSPPLIASALSDLRRLPKETVFNLSG 60

Query: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120
           FRF STARRN TRPK VDIGARARQLQTRRLWTYALTFSCIAGF+VI+L+NF+EHL+FYV
Sbjct: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIILNNFEEHLLFYV 120

Query: 121 TPTDALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180
           TPTDALEK+SANPSKNKFRLGGLVLEGSV HPASSSQMEFVITDL+TD+LVRHQGSLPDL
Sbjct: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAA 240
           FREGHSVV EGF+KPFTDEIRNE+STKSVSGKARS +YYFSA EVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNRKKIEEGELGVNHA 260
           AIEKN+KKIEEGELG NHA
Sbjct: 241 AIEKNKKKIEEGELGANHA 259

BLAST of CsGy1G029620 vs. NCBI nr
Match: XP_022988189.1 (uncharacterized protein LOC111485504 [Cucurbita maxima])

HSP 1 Score: 431.4 bits (1108), Expect = 2.2e-117
Identity = 219/259 (84.56%), Postives = 236/259 (91.12%), Query Frame = 0

Query: 1   MATNLALRLRSRLLLQSSSRFRTTFHQFQSPHIPKSSPLITSALSDLRRIPNNPIFNLSG 60
           MA+NLA RLRS LLL+SS RF  T +  QS  IPK  PLI+SALSDLRR+P   +FNLSG
Sbjct: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSVIPKPPPLISSALSDLRRLPKETVFNLSG 60

Query: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120
           FRF STARRN TRPK VDIGARARQLQTRRLWTYALTFSCIAGF+VIVL+NF+EHL+FYV
Sbjct: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNNFEEHLLFYV 120

Query: 121 TPTDALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180
           TPTDALEK+SANPSKNKFRLGGLVLEGSV HPASSSQMEFVITDL+TD+LVRHQGSLPDL
Sbjct: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAA 240
           FREGHSVV EGF+KPFTDEIRNE+STKSVSGKARS +YYFSA EVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNRKKIEEGELGVNHA 260
           AIEKN+KKIEEGELG NHA
Sbjct: 241 AIEKNKKKIEEGELGANHA 259

BLAST of CsGy1G029620 vs. TAIR10
Match: AT3G51790.1 (transmembrane protein G1P-related 1)

HSP 1 Score: 298.5 bits (763), Expect = 4.0e-81
Identity = 160/250 (64.00%), Postives = 192/250 (76.80%), Query Frame = 0

Query: 1   MATNLALRLRSRLLLQSSSRFRTTFHQFQSPHIPKSSPLITSALSDLRRIPNNPIFNLSG 60
           MA  L  R RS  +L+S  R       F+SP  P    L T++    R      + +L+ 
Sbjct: 1   MAARLLFR-RSSQILRSIQRNPQISSSFESPPCPIFHSLTTASPDPSR------LSSLTF 60

Query: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120
            R  S ARR  TRPK +DIGA+ARQ+Q RRLWTYALTFSCIAGFVVIVL+ FQ+ L+FY+
Sbjct: 61  LRSLSIARRGPTRPKKIDIGAKARQMQNRRLWTYALTFSCIAGFVVIVLNQFQDQLVFYL 120

Query: 121 TPTDALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180
           TP+DA+EKF+ NP+KNKFRLGGLVLEGSV  PA+S +MEFVITDLITD+LVR++GSLPDL
Sbjct: 121 TPSDAMEKFAENPTKNKFRLGGLVLEGSVAQPAASQEMEFVITDLITDILVRYKGSLPDL 180

Query: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAA 240
           FREGHSVVVEGF+KP+TDE+R E+STK +S KAR+   +FSA EVLAKHDEKYMP EVAA
Sbjct: 181 FREGHSVVVEGFIKPYTDEVRKEVSTKPISKKARNLDCFFSATEVLAKHDEKYMPQEVAA 240

Query: 241 AIEKNRKKIE 251
           AIEKN+K IE
Sbjct: 241 AIEKNKKIIE 243

BLAST of CsGy1G029620 vs. Swiss-Prot
Match: sp|Q96326|CCME_ARATH (Cytochrome c-type biogenesis protein CcmE homolog, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CCME PE=1 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 7.1e-80
Identity = 160/250 (64.00%), Postives = 192/250 (76.80%), Query Frame = 0

Query: 1   MATNLALRLRSRLLLQSSSRFRTTFHQFQSPHIPKSSPLITSALSDLRRIPNNPIFNLSG 60
           MA  L  R RS  +L+S  R       F+SP  P    L T++    R      + +L+ 
Sbjct: 1   MAARLLFR-RSSQILRSIQRNPQISSSFESPPCPIFHSLTTASPDPSR------LSSLTF 60

Query: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120
            R  S ARR  TRPK +DIGA+ARQ+Q RRLWTYALTFSCIAGFVVIVL+ FQ+ L+FY+
Sbjct: 61  LRSLSIARRGPTRPKKIDIGAKARQMQNRRLWTYALTFSCIAGFVVIVLNQFQDQLVFYL 120

Query: 121 TPTDALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180
           TP+DA+EKF+ NP+KNKFRLGGLVLEGSV  PA+S +MEFVITDLITD+LVR++GSLPDL
Sbjct: 121 TPSDAMEKFAENPTKNKFRLGGLVLEGSVAQPAASQEMEFVITDLITDILVRYKGSLPDL 180

Query: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAA 240
           FREGHSVVVEGF+KP+TDE+R E+STK +S KAR+   +FSA EVLAKHDEKYMP EVAA
Sbjct: 181 FREGHSVVVEGFIKPYTDEVRKEVSTKPISKKARNLDCFFSATEVLAKHDEKYMPQEVAA 240

Query: 241 AIEKNRKKIE 251
           AIEKN+K IE
Sbjct: 241 AIEKNKKIIE 243

BLAST of CsGy1G029620 vs. Swiss-Prot
Match: sp|Q2RYF4|CCME_RHORT (Cytochrome c-type biogenesis protein CcmE OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1) OX=269796 GN=ccmE PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.9e-18
Identity = 60/159 (37.74%), Postives = 82/159 (51.57%), Query Frame = 0

Query: 89  RRLWTYALTFSCIAGFVVIVLSNFQEHLMFYVTPTDALEKFSANPSKNKFRLGGLVLEGS 148
           RRL+   L    +     + L+ FQ++L+F+ +PTD  EK        +FR+GGLV EGS
Sbjct: 6   RRLYFVVLGMLALFAAAGLTLTAFQDNLVFFYSPTDLQEK--GVDQGRRFRVGGLVEEGS 65

Query: 149 VTHPASSSQMEFVITDLITDMLVRHQGSLPDLFREGHSVVVEGFLKPFTDEIRNEISTKS 208
           V     +  + F++TDL+  + VR+ G LPDLFREG  VV EG                 
Sbjct: 66  VVRDGET--VRFIVTDLMNTVTVRYTGMLPDLFREGQGVVAEG----------------- 125

Query: 209 VSGKARSEKYYFSAIEVLAKHDEKYMPAEVAAAIEKNRK 248
               A      F A  VLAKHDE YMP EVA +++ + K
Sbjct: 126 ----AMDGAGTFVAASVLAKHDENYMPPEVAESLKASGK 139

BLAST of CsGy1G029620 vs. Swiss-Prot
Match: sp|A1KCJ1|CCME_AZOSB (Cytochrome c-type biogenesis protein CcmE OS=Azoarcus sp. (strain BH72) OX=62928 GN=ccmE PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.7e-17
Identity = 57/141 (40.43%), Postives = 76/141 (53.90%), Query Frame = 0

Query: 107 IVLSNFQEHLMFYVTPTDALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLI 166
           +VLS FQ++L+F+ TP++  E     P    FR+GG+V  GS+   A    + FVITD  
Sbjct: 24  LVLSAFQQNLVFFHTPSEVAE--GKAPVGKTFRVGGMVETGSIQRDADGVTVRFVITDTA 83

Query: 167 TDMLVRHQGSLPDLFREGHSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVL 226
             + V ++GSLPDLF+EG   VV+G              T    G+       F A EVL
Sbjct: 84  KVIPVSYRGSLPDLFKEGKGAVVQG--------------TLGADGQ-------FRATEVL 141

Query: 227 AKHDEKYMPAEVAAAIEKNRK 248
           AKHDE YMP E A A+E+  K
Sbjct: 144 AKHDENYMPPEAAHALEQAHK 141

BLAST of CsGy1G029620 vs. Swiss-Prot
Match: sp|B3R8Z5|CCME_CUPTR (Cytochrome c-type biogenesis protein CcmE OS=Cupriavidus taiwanensis (strain DSM 17343 / BCRC 17206 / CIP 107171 / LMG 19424 / R1) OX=977880 GN=ccmE PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.7e-17
Identity = 57/156 (36.54%), Postives = 79/156 (50.64%), Query Frame = 0

Query: 89  RRLWTYALTFSCIAGFVVIVLSNFQEHLMFYVTPTDALEKFSANPSKNKFRLGGLVLEGS 148
           RRL   A   +C      +VL+ F+ +L+F+ +P+    + +  P    FRLGGLV  GS
Sbjct: 6   RRLGLLAAALACCGVAAALVLNAFRANLVFFFSPSQVAAQEA--PVARSFRLGGLVASGS 65

Query: 149 VTHPASSSQMEFVITDLITDMLVRHQGSLPDLFREGHSVVVEGFLKPFTDEIRNEISTKS 208
           +        + FV+TD    + V+++G LPDLFREG  VV  G L+              
Sbjct: 66  IRREGDGMTVRFVVTDTARQVPVQYRGLLPDLFREGKGVVARGQLR-------------- 125

Query: 209 VSGKARSEKYYFSAIEVLAKHDEKYMPAEVAAAIEK 245
             G        F A EVLAKHDE YMP E AAA+++
Sbjct: 126 ADGT-------FVATEVLAKHDENYMPPEAAAALKQ 138

BLAST of CsGy1G029620 vs. Swiss-Prot
Match: sp|A1WWS3|CCME_HALHL (Cytochrome c-type biogenesis protein CcmE OS=Halorhodospira halophila (strain DSM 244 / SL1) OX=349124 GN=ccmE PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.7e-17
Identity = 56/159 (35.22%), Postives = 88/159 (55.35%), Query Frame = 0

Query: 96  LTFSCIAGFVV---IVLSNFQEHLMFYVTPTDALEKFSANPSKNKFRLGGLVLEGSVTHP 155
           L    +AG  V   +VL+ F++++ F++TP++ + K  ++  +  FR+GGLV +GSV   
Sbjct: 10  LVLGVVAGVSVATALVLNAFRDNMTFFITPSEVMAK--SDMPERHFRIGGLVEDGSVERD 69

Query: 156 ASSSQMEFVITDLITDMLVRHQGSLPDLFREGHSVVVEGFLKPFTDEIRNEISTKSVSGK 215
           + S+Q+ F +TD    + V  +G LPDLFREG  VVVEG            I++  V   
Sbjct: 70  SDSTQVRFRVTDTEASVPVDFEGILPDLFREGQGVVVEG-----------RITSNGV--- 129

Query: 216 ARSEKYYFSAIEVLAKHDEKYMPAEVAAAIEKNRKKIEE 252
                  F A  V+A+HDE YMPAE   A+++    ++E
Sbjct: 130 -------FKADNVMARHDEDYMPAEAQEALDRVEHSVDE 145

BLAST of CsGy1G029620 vs. TrEMBL
Match: tr|A0A0A0M028|A0A0A0M028_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613490 PE=3 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 7.8e-140
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0

Query: 1   MATNLALRLRSRLLLQSSSRFRTTFHQFQSPHIPKSSPLITSALSDLRRIPNNPIFNLSG 60
           MATNLALRLRSRLLLQSSSRFRTTFHQFQSPHIPKSSPLITSALSDLRRIPNNPIFNLSG
Sbjct: 1   MATNLALRLRSRLLLQSSSRFRTTFHQFQSPHIPKSSPLITSALSDLRRIPNNPIFNLSG 60

Query: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120
           FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV
Sbjct: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120

Query: 121 TPTDALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180
           TPTDALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL
Sbjct: 121 TPTDALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAA 240
           FREGHSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNRKKIEEGELGVNHA 260
           AIEKNRKKIEEGELGVNHA
Sbjct: 241 AIEKNRKKIEEGELGVNHA 259

BLAST of CsGy1G029620 vs. TrEMBL
Match: tr|A0A1S3BP93|A0A1S3BP93_CUCME (cytochrome c-type biogenesis protein CcmE OS=Cucumis melo OX=3656 GN=LOC103492039 PE=3 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 6.8e-136
Identity = 252/259 (97.30%), Postives = 255/259 (98.46%), Query Frame = 0

Query: 1   MATNLALRLRSRLLLQSSSRFRTTFHQFQSPHIPKSSPLITSALSDLRRIPNNPIFNLSG 60
           MATNLA RLRSRLLLQSSSRFRTTFHQ QSPHIPKSSPLI+SALSDLRRIP+NPIFNLSG
Sbjct: 1   MATNLAFRLRSRLLLQSSSRFRTTFHQIQSPHIPKSSPLISSALSDLRRIPDNPIFNLSG 60

Query: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120
           FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV
Sbjct: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120

Query: 121 TPTDALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180
           TPTDALEKFSANP+KNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL
Sbjct: 121 TPTDALEKFSANPAKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAA 240
           FREGHSVVVEGFLKPFTDEIRNEISTKSVS KARSEKYYFSAIEVLAKHDEKYMPAEV A
Sbjct: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSEKARSEKYYFSAIEVLAKHDEKYMPAEVGA 240

Query: 241 AIEKNRKKIEEGELGVNHA 260
           AIEKNRKKIEEGELGVNHA
Sbjct: 241 AIEKNRKKIEEGELGVNHA 259

BLAST of CsGy1G029620 vs. TrEMBL
Match: tr|A0A1L1XW02|A0A1L1XW02_HEVBR (Unc-51 like autophagy activating kinase 1 OS=Hevea brasiliensis subsp. brasiliensis OX=187338 GN=ULK1 PE=2 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 6.9e-88
Identity = 177/249 (71.08%), Postives = 206/249 (82.73%), Query Frame = 0

Query: 7   LRLRSRLLLQSSSRFRTTFHQFQSPHIP--KSSPLITSALSDLRRIPNNPIFNLSGFRFF 66
           LRLRS LL  +SS   + F Q  SP +   KS  L+   LSDL  I +    +L+G RFF
Sbjct: 8   LRLRSHLLCTTSSS-SSRFFQSNSPILSTIKSERLLLFPLSDLHAI-SMEFPSLAGLRFF 67

Query: 67  STARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYVTPTD 126
           STARR+ TRPK+VDIGARARQLQTRRLWTYALTFSC+AGF+VIVL+NFQ+ L+FYVTPTD
Sbjct: 68  STARRHPTRPKNVDIGARARQLQTRRLWTYALTFSCVAGFIVIVLNNFQDQLVFYVTPTD 127

Query: 127 ALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDLFREG 186
           A+EK+ ANP K+KFRLGGLVLEGSV  P SS +MEFVITDL+TD+LVR+QGSLPDLFREG
Sbjct: 128 AMEKYKANPQKSKFRLGGLVLEGSVVQPVSSPEMEFVITDLVTDILVRYQGSLPDLFREG 187

Query: 187 HSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAAAIEK 246
           HSVVVEGF+KPFT+E+R E+  +SVSGKARS K YFSA EVLAKHDEKYMP EVAAAIEK
Sbjct: 188 HSVVVEGFVKPFTEELRKEVGARSVSGKARSGKCYFSATEVLAKHDEKYMPKEVAAAIEK 247

Query: 247 NRKKIEEGE 254
           N+++IE GE
Sbjct: 248 NKQRIEAGE 254

BLAST of CsGy1G029620 vs. TrEMBL
Match: tr|A0A2C9VRL6|A0A2C9VRL6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G166600 PE=3 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 9.0e-88
Identity = 175/248 (70.56%), Postives = 205/248 (82.66%), Query Frame = 0

Query: 8   RLRSRLLLQSSSRFRTTFHQFQSPHIP--KSSPLITSALSDLRRIPNNPIFNLSGFRFFS 67
           RLRS L+  S++   +      +P +   KS  LI S LSDLR++ +    +L+G RFFS
Sbjct: 9   RLRSHLIRTSTTTITSRLFHSTTPTLSTIKSECLILSPLSDLRKV-STEFPSLTGLRFFS 68

Query: 68  TARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYVTPTDA 127
           TARR+ TRPK VDIGARARQLQTRRLWTYALTFSCIAGF+VIVL++FQ+ L+FYVTPTDA
Sbjct: 69  TARRHPTRPKTVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNSFQDQLVFYVTPTDA 128

Query: 128 LEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDLFREGH 187
           +EK+ ANP KNKFRLGGLVLEGSV  PASS +MEFVITDLITD+LVR+QGSLPDLFREGH
Sbjct: 129 MEKYKANPQKNKFRLGGLVLEGSVAQPASSPEMEFVITDLITDILVRYQGSLPDLFREGH 188

Query: 188 SVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAAAIEKN 247
           SVVVEGF+KPFT+E+R E+  KSVSGKARS + YFSA EVLAKHDEKYMP EVAAAIEKN
Sbjct: 189 SVVVEGFVKPFTEELRKEVGVKSVSGKARSGECYFSATEVLAKHDEKYMPKEVAAAIEKN 248

Query: 248 RKKIEEGE 254
           +++IE  E
Sbjct: 249 KQQIEAAE 255

BLAST of CsGy1G029620 vs. TrEMBL
Match: tr|A0A067JPZ7|A0A067JPZ7_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_25901 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.4e-85
Identity = 176/249 (70.68%), Postives = 199/249 (79.92%), Query Frame = 0

Query: 7   LRLRSRLLLQSSSRFRTTFHQFQSPHIP--KSSPLITSALSDLRRIPNNPIFNLSGFRFF 66
           LRLRS LL  +++   +      SP +   KS  LI S +SDLR I +    +L G RFF
Sbjct: 8   LRLRSHLLRSTTTINASRLFHLNSPILSTIKSERLILSPVSDLRTI-STEFPSLFGPRFF 67

Query: 67  STARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYVTPTD 126
           ST RR  TR K VDIGARARQLQTRRLWTYALTFSCIAGF+VIVL+NFQ+ L+FYVTPTD
Sbjct: 68  STVRRQPTRSKTVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPTD 127

Query: 127 ALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDLFREG 186
           A+EK+  NP KNKFRLGGLVLEGSV  PASS +MEFVITDLITD+LVR+QGSLPDLFREG
Sbjct: 128 AMEKYKENPQKNKFRLGGLVLEGSVVQPASSPEMEFVITDLITDILVRYQGSLPDLFREG 187

Query: 187 HSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAAAIEK 246
           HSVVVEGF+KPFT+E++ E+  KSVSGKARS   YFSA EVLAKHDEKYMP EVAAAIEK
Sbjct: 188 HSVVVEGFVKPFTEELKKEVGAKSVSGKARSIDCYFSATEVLAKHDEKYMPKEVAAAIEK 247

Query: 247 NRKKIEEGE 254
           N+K IE GE
Sbjct: 248 NKKLIEAGE 255

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004139025.11.2e-139100.00PREDICTED: uncharacterized protein LOC101211081 [Cucumis sativus] >KGN66477.1 hy... [more]
XP_008450439.11.0e-13597.30PREDICTED: cytochrome c-type biogenesis protein CcmE [Cucumis melo][more]
XP_022960773.14.3e-11884.56uncharacterized protein LOC111461474 [Cucurbita moschata][more]
XP_023515457.17.4e-11884.56uncharacterized protein LOC111779609 [Cucurbita pepo subsp. pepo][more]
XP_022988189.12.2e-11784.56uncharacterized protein LOC111485504 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT3G51790.14.0e-8164.00transmembrane protein G1P-related 1[more]
Match NameE-valueIdentityDescription
sp|Q96326|CCME_ARATH7.1e-8064.00Cytochrome c-type biogenesis protein CcmE homolog, mitochondrial OS=Arabidopsis ... [more]
sp|Q2RYF4|CCME_RHORT5.9e-1837.74Cytochrome c-type biogenesis protein CcmE OS=Rhodospirillum rubrum (strain ATCC ... [more]
sp|A1KCJ1|CCME_AZOSB1.7e-1740.43Cytochrome c-type biogenesis protein CcmE OS=Azoarcus sp. (strain BH72) OX=62928... [more]
sp|B3R8Z5|CCME_CUPTR1.7e-1736.54Cytochrome c-type biogenesis protein CcmE OS=Cupriavidus taiwanensis (strain DSM... [more]
sp|A1WWS3|CCME_HALHL1.7e-1735.22Cytochrome c-type biogenesis protein CcmE OS=Halorhodospira halophila (strain DS... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0M028|A0A0A0M028_CUCSA7.8e-140100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613490 PE=3 SV=1[more]
tr|A0A1S3BP93|A0A1S3BP93_CUCME6.8e-13697.30cytochrome c-type biogenesis protein CcmE OS=Cucumis melo OX=3656 GN=LOC10349203... [more]
tr|A0A1L1XW02|A0A1L1XW02_HEVBR6.9e-8871.08Unc-51 like autophagy activating kinase 1 OS=Hevea brasiliensis subsp. brasilien... [more]
tr|A0A2C9VRL6|A0A2C9VRL6_MANES9.0e-8870.56Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G166600 PE=3 SV=... [more]
tr|A0A067JPZ7|A0A067JPZ7_JATCU1.4e-8570.68Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_25901 PE=3 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0020037heme binding
Vocabulary: Cellular Component
TermDefinition
GO:0005886plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0017003protein-heme linkage
GO:0017004cytochrome complex assembly
Vocabulary: INTERPRO
TermDefinition
IPR036127CcmE-like_sf
IPR004329CcmE
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0018063 cytochrome c-heme linkage
biological_process GO:0016310 phosphorylation
biological_process GO:0017004 cytochrome complex assembly
biological_process GO:0017003 protein-heme linkage
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0020037 heme binding
molecular_function GO:0016301 kinase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G029620.1CsGy1G029620.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004329CcmE/CycJ proteinPFAMPF03100CcmEcoord: 87..235
e-value: 1.9E-43
score: 147.4
IPR004329CcmE/CycJ proteinPANTHERPTHR34128FAMILY NOT NAMEDcoord: 1..253
IPR004329CcmE/CycJ proteinHAMAPMF_01959CcmEcoord: 84..246
score: 24.471
NoneNo IPR availableGENE3DG3DSA:2.40.50.140coord: 112..242
e-value: 2.1E-27
score: 97.4
NoneNo IPR availablePANTHERPTHR34128:SF2SUBFAMILY NOT NAMEDcoord: 1..253
IPR036127CcmE-like superfamilySUPERFAMILYSSF82093Heme chaperone CcmEcoord: 112..241

The following gene(s) are paralogous to this gene:

None