CsGy1G029390 (gene) Cucumber (Gy14) v2

NameCsGy1G029390
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionbeta-glucosidase 12
LocationChr1 : 27478350 .. 27478729 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGAACTTGTGAAGGAGAGATTACCCAAATTTACAAGGGCAGAAGCTGCTCTAATCAAAGGCTCAATGGATTTTCTTGGATTAAATTACTACACAACTAATTATGCTAAAGACAATCCCAAAGCACCTGGCCCTCAACCAAGTTACTTAACAGATTATAGAGCTGATCTTTCAAGTATGCATACATTACTCTAAACTATATAATTTCATCTCTCTTTTAATTTTAGGTAATGTTTCTTTGGTAAAGACTAATGGTCCATTTGTTGGAACCACTTGTCATCAAATTAGGTTTTTGCTTTTCTCCCCTATTAAAACATCTGCAAACTATTTAATTTTGAAGTTCTGAAAACGTTTAATTTCTTTCTCAAGATATATAA

mRNA sequence

ATGAGGGAACTTGTGAAGGAGAGATTACCCAAATTTACAAGGGCAGAAGCTGCTCTAATCAAAGGCTCAATGGATTTTCTTGGATTAAATTACTACACAACTAATTATGCTAAAGACAATCCCAAAGCACCTGGCCCTCAACCAAGTTACTTAACAGATTATAGAGCTGATCTTTCAAATATATAA

Coding sequence (CDS)

ATGAGGGAACTTGTGAAGGAGAGATTACCCAAATTTACAAGGGCAGAAGCTGCTCTAATCAAAGGCTCAATGGATTTTCTTGGATTAAATTACTACACAACTAATTATGCTAAAGACAATCCCAAAGCACCTGGCCCTCAACCAAGTTACTTAACAGATTATAGAGCTGATCTTTCAAATATATAA

Protein sequence

MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADLSNI
BLAST of CsGy1G029390 vs. NCBI nr
Match: KGN66451.1 (hypothetical protein Csa_1G611280 [Cucumis sativus])

HSP 1 Score: 124.0 bits (310), Expect = 1.7e-25
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0

Query: 1   MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADLS 60
           MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADLS
Sbjct: 317 MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADLS 375

BLAST of CsGy1G029390 vs. NCBI nr
Match: XP_011660111.1 (PREDICTED: beta-glucosidase 12-like [Cucumis sativus])

HSP 1 Score: 124.0 bits (310), Expect = 1.7e-25
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0

Query: 1   MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADLS 60
           MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADLS
Sbjct: 221 MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADLS 279

BLAST of CsGy1G029390 vs. NCBI nr
Match: XP_008450457.1 (PREDICTED: cyanogenic beta-glucosidase-like [Cucumis melo])

HSP 1 Score: 113.6 bits (283), Expect = 2.3e-22
Identity = 53/59 (89.83%), Postives = 55/59 (93.22%), Query Frame = 0

Query: 1   MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADLS 60
           MRELVKERLPKFT+AE ALIKGS+DFLGLNYYT NYAKDNP APGPQPSYLTDYRAD S
Sbjct: 317 MRELVKERLPKFTKAEVALIKGSIDFLGLNYYTANYAKDNPNAPGPQPSYLTDYRADQS 375

BLAST of CsGy1G029390 vs. NCBI nr
Match: XP_022960706.1 (cyanogenic beta-glucosidase-like [Cucurbita moschata])

HSP 1 Score: 111.7 bits (278), Expect = 8.9e-22
Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = 0

Query: 1   MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADLS 60
           MRELVKERLPKF+ AE+A IKGS+DFLGLNYYT NYAKDNP APGPQPSYLTDYRADLS
Sbjct: 316 MRELVKERLPKFSAAESASIKGSLDFLGLNYYTANYAKDNPNAPGPQPSYLTDYRADLS 374

BLAST of CsGy1G029390 vs. NCBI nr
Match: XP_023516390.1 (cyanogenic beta-glucosidase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 108.6 bits (270), Expect = 7.5e-21
Identity = 51/59 (86.44%), Postives = 54/59 (91.53%), Query Frame = 0

Query: 1   MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADLS 60
           MRELVKERLPKF+ AE+A IKGS+DFLGLNYYT NYAKDNP APG QPSYLTDYRADLS
Sbjct: 316 MRELVKERLPKFSAAESASIKGSLDFLGLNYYTANYAKDNPNAPGQQPSYLTDYRADLS 374

BLAST of CsGy1G029390 vs. TAIR10
Match: AT1G51470.1 (beta glucosidase 35)

HSP 1 Score: 69.7 bits (169), Expect = 7.0e-13
Identity = 34/58 (58.62%), Postives = 43/58 (74.14%), Query Frame = 0

Query: 1   MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADL 59
           MRE+V +RLP+FT  E+AL+KGS+DFLGLNYY + YA D P  P  QP+ +TD R  L
Sbjct: 320 MREMVGDRLPEFTPEESALVKGSLDFLGLNYYVSQYATDAP--PPTQPNAITDARVTL 375

BLAST of CsGy1G029390 vs. TAIR10
Match: AT1G47600.1 (beta glucosidase 34)

HSP 1 Score: 66.2 bits (160), Expect = 7.8e-12
Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 0

Query: 1   MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADL 59
           MRE+V +RLP+FT  ++AL+KGS+DFLGLNYY T YA D P  P  Q + +TD R  L
Sbjct: 320 MREMVGDRLPEFTPEQSALVKGSLDFLGLNYYVTQYATDAP--PPTQLNAITDARVTL 375

BLAST of CsGy1G029390 vs. TAIR10
Match: AT5G25980.2 (glucoside glucohydrolase 2)

HSP 1 Score: 62.8 bits (151), Expect = 8.6e-11
Identity = 31/61 (50.82%), Postives = 41/61 (67.21%), Query Frame = 0

Query: 1   MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADLSN 60
           MR+LV  RLPKF   EA L+KGS DFLGLNYY T YA     +P  + + +TD  A+L++
Sbjct: 328 MRKLVGNRLPKFNSTEARLLKGSYDFLGLNYYVTQYAHALDPSPPEKLTAMTDSLANLTS 387

Query: 61  I 62
           +
Sbjct: 388 L 388

BLAST of CsGy1G029390 vs. TAIR10
Match: AT5G26000.1 (thioglucoside glucohydrolase 1)

HSP 1 Score: 62.8 bits (151), Expect = 8.6e-11
Identity = 32/61 (52.46%), Postives = 41/61 (67.21%), Query Frame = 0

Query: 1   MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPK-APGPQPSYLTDYRADLS 60
           MRE V +RLP+F+  EAAL+KGS DFLGLNYY T YA++N    P    + L D R  L+
Sbjct: 317 MREYVGDRLPEFSETEAALVKGSYDFLGLNYYVTQYAQNNQTIVPSDVHTALMDSRTTLT 376

BLAST of CsGy1G029390 vs. TAIR10
Match: AT2G44480.1 (beta glucosidase 17)

HSP 1 Score: 60.5 bits (145), Expect = 4.3e-10
Identity = 28/57 (49.12%), Postives = 37/57 (64.91%), Query Frame = 0

Query: 1   MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRAD 58
           MRELV  RLPKFT+ ++ +++GS DF GLNYYT+ Y +D         SY TD R +
Sbjct: 315 MRELVGNRLPKFTKKQSKMVRGSFDFFGLNYYTSRYVEDVMFYANTNLSYTTDSRVN 371

BLAST of CsGy1G029390 vs. Swiss-Prot
Match: sp|Q7XKV2|BGL13_ORYSJ (Beta-glucosidase 13 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU13 PE=2 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 3.0e-13
Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 0

Query: 1   MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADLSN 60
           MRELV+ RLP+FT+ ++ LIKGS DF+GLNYYT+NYA   P + G   SY TD RA+L+ 
Sbjct: 311 MRELVRNRLPQFTKEQSELIKGSFDFIGLNYYTSNYAGSLPPSNGLNNSYSTDARANLTA 370

Query: 61  I 62
           +
Sbjct: 371 V 371

BLAST of CsGy1G029390 vs. Swiss-Prot
Match: sp|B8AVF0|BGL12_ORYSI (Beta-glucosidase 12 OS=Oryza sativa subsp. indica OX=39946 GN=BGLU12 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 5.7e-12
Identity = 32/61 (52.46%), Postives = 44/61 (72.13%), Query Frame = 0

Query: 1   MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADLSN 60
           MR LV  RLP+FT+ ++ L+KG+ DF+GLNYYT NYA + P + G   SY TD RA+L+ 
Sbjct: 315 MRGLVGNRLPQFTKEQSKLVKGAFDFIGLNYYTANYADNLPPSNGLNNSYTTDSRANLTG 374

Query: 61  I 62
           +
Sbjct: 375 V 375

BLAST of CsGy1G029390 vs. Swiss-Prot
Match: sp|Q7XKV4|BGL12_ORYSJ (Beta-glucosidase 12 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU12 PE=1 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 5.7e-12
Identity = 32/61 (52.46%), Postives = 44/61 (72.13%), Query Frame = 0

Query: 1   MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADLSN 60
           MR LV  RLP+FT+ ++ L+KG+ DF+GLNYYT NYA + P + G   SY TD RA+L+ 
Sbjct: 315 MRGLVGNRLPQFTKEQSKLVKGAFDFIGLNYYTANYADNLPPSNGLNNSYTTDSRANLTG 374

Query: 61  I 62
           +
Sbjct: 375 V 375

BLAST of CsGy1G029390 vs. Swiss-Prot
Match: sp|Q3ECS3|BGL35_ARATH (Myrosinase 5 OS=Arabidopsis thaliana OX=3702 GN=TGG5 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.3e-11
Identity = 34/58 (58.62%), Postives = 43/58 (74.14%), Query Frame = 0

Query: 1   MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADL 59
           MRE+V +RLP+FT  E+AL+KGS+DFLGLNYY + YA D P  P  QP+ +TD R  L
Sbjct: 320 MREMVGDRLPEFTPEESALVKGSLDFLGLNYYVSQYATDAP--PPTQPNAITDARVTL 375

BLAST of CsGy1G029390 vs. Swiss-Prot
Match: sp|Q84YK7|BGL27_ORYSJ (Beta-glucosidase 27 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU27 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 6.3e-11
Identity = 32/54 (59.26%), Postives = 41/54 (75.93%), Query Frame = 0

Query: 1   MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGP-QPSYLTD 54
           MR+LV +RLPKFT  ++ L+KGS DF+GLNYYTTNYAK   + P   +P+Y TD
Sbjct: 304 MRKLVGDRLPKFTAEQSELVKGSYDFIGLNYYTTNYAKSVLRRPSKLKPAYATD 357

BLAST of CsGy1G029390 vs. TrEMBL
Match: tr|A0A0A0M2N7|A0A0A0M2N7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G611280 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-25
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0

Query: 1   MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADLS 60
           MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADLS
Sbjct: 317 MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADLS 375

BLAST of CsGy1G029390 vs. TrEMBL
Match: tr|A0A1S3BP89|A0A1S3BP89_CUCME (cyanogenic beta-glucosidase-like OS=Cucumis melo OX=3656 GN=LOC103492052 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-22
Identity = 53/59 (89.83%), Postives = 55/59 (93.22%), Query Frame = 0

Query: 1   MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADLS 60
           MRELVKERLPKFT+AE ALIKGS+DFLGLNYYT NYAKDNP APGPQPSYLTDYRAD S
Sbjct: 317 MRELVKERLPKFTKAEVALIKGSIDFLGLNYYTANYAKDNPNAPGPQPSYLTDYRADQS 375

BLAST of CsGy1G029390 vs. TrEMBL
Match: tr|A0A1S3BPA3|A0A1S3BPA3_CUCME (cyanogenic beta-glucosidase-like OS=Cucumis melo OX=3656 GN=LOC103492051 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.2e-20
Identity = 49/59 (83.05%), Postives = 53/59 (89.83%), Query Frame = 0

Query: 1   MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADLS 60
           MR LVKERLPKF+  E+A +KGS+DFLGLNYYT NYAKDNP APGPQPSYLTDYRADLS
Sbjct: 317 MRGLVKERLPKFSPEESASLKGSIDFLGLNYYTANYAKDNPNAPGPQPSYLTDYRADLS 375

BLAST of CsGy1G029390 vs. TrEMBL
Match: tr|A0A0A0LZZ9|A0A0A0LZZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G611290 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 6.7e-18
Identity = 45/59 (76.27%), Postives = 53/59 (89.83%), Query Frame = 0

Query: 1   MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADLS 60
           M+ELVKERLPKF++ E+A + GS+DFLGLNYYT NYAKDNP APGPQP+YLTD+RA LS
Sbjct: 316 MKELVKERLPKFSQEESASLIGSIDFLGLNYYTANYAKDNPTAPGPQPNYLTDWRAYLS 374

BLAST of CsGy1G029390 vs. TrEMBL
Match: tr|A0A1S3BPA0|A0A1S3BPA0_CUCME (beta-glucosidase 12 OS=Cucumis melo OX=3656 GN=BG2 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-13
Identity = 39/59 (66.10%), Postives = 45/59 (76.27%), Query Frame = 0

Query: 1   MRELVKERLPKFTRAEAALIKGSMDFLGLNYYTTNYAKDNPKAPGPQPSYLTDYRADLS 60
           MRELVKERLPKFT  E  L+KGS DFLG+NYYT NYAK+NP     +PS +TD  AD+S
Sbjct: 322 MRELVKERLPKFTEDEVTLVKGSYDFLGINYYTANYAKNNPNVDPNKPSQVTDAHADVS 380

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN66451.11.7e-25100.00hypothetical protein Csa_1G611280 [Cucumis sativus][more]
XP_011660111.11.7e-25100.00PREDICTED: beta-glucosidase 12-like [Cucumis sativus][more]
XP_008450457.12.3e-2289.83PREDICTED: cyanogenic beta-glucosidase-like [Cucumis melo][more]
XP_022960706.18.9e-2288.14cyanogenic beta-glucosidase-like [Cucurbita moschata][more]
XP_023516390.17.5e-2186.44cyanogenic beta-glucosidase-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT1G51470.17.0e-1358.62beta glucosidase 35[more]
AT1G47600.17.8e-1256.90beta glucosidase 34[more]
AT5G25980.28.6e-1150.82glucoside glucohydrolase 2[more]
AT5G26000.18.6e-1152.46thioglucoside glucohydrolase 1[more]
AT2G44480.14.3e-1049.12beta glucosidase 17[more]
Match NameE-valueIdentityDescription
sp|Q7XKV2|BGL13_ORYSJ3.0e-1357.38Beta-glucosidase 13 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU13 PE=2 SV=2[more]
sp|B8AVF0|BGL12_ORYSI5.7e-1252.46Beta-glucosidase 12 OS=Oryza sativa subsp. indica OX=39946 GN=BGLU12 PE=3 SV=1[more]
sp|Q7XKV4|BGL12_ORYSJ5.7e-1252.46Beta-glucosidase 12 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU12 PE=1 SV=2[more]
sp|Q3ECS3|BGL35_ARATH1.3e-1158.62Myrosinase 5 OS=Arabidopsis thaliana OX=3702 GN=TGG5 PE=1 SV=1[more]
sp|Q84YK7|BGL27_ORYSJ6.3e-1159.26Beta-glucosidase 27 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU27 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A0A0M2N7|A0A0A0M2N7_CUCSA1.1e-25100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G611280 PE=3 SV=1[more]
tr|A0A1S3BP89|A0A1S3BP89_CUCME1.5e-2289.83cyanogenic beta-glucosidase-like OS=Cucumis melo OX=3656 GN=LOC103492052 PE=3 SV... [more]
tr|A0A1S3BPA3|A0A1S3BPA3_CUCME4.2e-2083.05cyanogenic beta-glucosidase-like OS=Cucumis melo OX=3656 GN=LOC103492051 PE=3 SV... [more]
tr|A0A0A0LZZ9|A0A0A0LZZ9_CUCSA6.7e-1876.27Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G611290 PE=3 SV=1[more]
tr|A0A1S3BPA0|A0A1S3BPA0_CUCME1.3e-1366.10beta-glucosidase 12 OS=Cucumis melo OX=3656 GN=BG2 PE=3 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
IPR001360Glyco_hydro_1
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G029390.1CsGy1G029390.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001360Glycoside hydrolase family 1PFAMPF00232Glyco_hydro_1coord: 1..42
e-value: 1.1E-6
score: 27.3
IPR001360Glycoside hydrolase family 1PANTHERPTHR10353GLYCOSYL HYDROLASEcoord: 1..59
NoneNo IPR availableGENE3DG3DSA:3.20.20.80coord: 1..61
e-value: 6.2E-16
score: 59.9
NoneNo IPR availablePANTHERPTHR10353:SF44BETA-GLUCOSIDASE 17-RELATEDcoord: 1..59
IPR017853Glycoside hydrolase superfamilySUPERFAMILYSSF51445(Trans)glycosidasescoord: 1..57

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G029390MELO3C015222.2Melon (DHL92) v3.6.1cgybmedB032
CsGy1G029390CsaV3_1G042480Cucumber (Chinese Long) v3cgybcucB001
CsGy1G029390Cla97C03G063770Watermelon (97103) v2cgybwmbB041
The following gene(s) are paralogous to this gene:

None