CsGy1G029040 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G029040
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Glucan endo-1,3-beta-glucosidase
Location	Chr1 : 27052846 .. 27053515 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAGCATAATTTCCATGTGATTTCCCTATTATTCATGGTACTCATGTCATCCATTGTCTAGAGGAAACAACATTCTTGGTGCATATCATGGATCCGAAGGTAACAACCTCCCACCACCATGGAAGGTGGTGCAACTCTGCCAAAAATACAATATTCGTCGCATTCGATTCAGTGAACCAAATCTCGATATTCTCTAACAGTTTCGTGGCACATATATCGAAGTCTCTTTTAGCGTACCAGGTGCATTGATAACAAACCAGGCGACCAATGACACGACGGTGGAGGAGTGGTTTGTCAAGTACGTCGTACCATTCATCGACGAGTTCACCATCAACTACATCGTTGTTGGTGACAAGGTCATACCGGGACTGAACGACAACATATTGCCTGTCATGAAATCCCTTCAAAATCTTCTCAATAGTCGTTACCTCGGACAAGTGAAAATCACCACGATGGTTGGCTTAGCCGCTTTGGGGGTTCAAACCCCTCCATCTAGTGGCGCTTTTGACCCAAACGTTCTCGAGAACATGAAAGGAATCCTTCAGTTCTTATGGGGACAAGGCTCGCCTTTGATGCTTAGCTTATATCCCCATTATGCATATGCTTACACGAGATACACTAATAATATAAGTTTGGGTTATGCAACATTCACTTCTCAAACATAA

mRNA sequence

ATGGCAAAGCATAATTTCCATTTTCGTGGCACATATATCGAAGTCTCTTTTAGCGTACCAGGTGCATTGATAACAAACCAGGCGACCAATGACACGACGGTGGAGGAGTGGTTTGTCAAGTACGTCGTACCATTCATCGACGAGTTCACCATCAACTACATCGTTGTTGGTGACAAGGTCATACCGGGACTGAACGACAACATATTGCCTGTCATGAAATCCCTTCAAAATCTTCTCAATAGTCGTTACCTCGGACAAGTGAAAATCACCACGATGGTTGGCTTAGCCGCTTTGGGGGTTCAAACCCCTCCATCTAGTGGCGCTTTTGACCCAAACGTTCTCGAGAACATGAAAGGAATCCTTCAGTTCTTATGGGGACAAGGCTCGCCTTTGATGCTTAGCTTATATCCCCATTATGCATATGCTTACACGAGATACACTAATAATATAAGTTTGGGTTATGCAACATTCACTTCTCAAACATAA

Coding sequence (CDS)

ATGGCAAAGCATAATTTCCATTTTCGTGGCACATATATCGAAGTCTCTTTTAGCGTACCAGGTGCATTGATAACAAACCAGGCGACCAATGACACGACGGTGGAGGAGTGGTTTGTCAAGTACGTCGTACCATTCATCGACGAGTTCACCATCAACTACATCGTTGTTGGTGACAAGGTCATACCGGGACTGAACGACAACATATTGCCTGTCATGAAATCCCTTCAAAATCTTCTCAATAGTCGTTACCTCGGACAAGTGAAAATCACCACGATGGTTGGCTTAGCCGCTTTGGGGGTTCAAACCCCTCCATCTAGTGGCGCTTTTGACCCAAACGTTCTCGAGAACATGAAAGGAATCCTTCAGTTCTTATGGGGACAAGGCTCGCCTTTGATGCTTAGCTTATATCCCCATTATGCATATGCTTACACGAGATACACTAATAATATAAGTTTGGGTTATGCAACATTCACTTCTCAAACATAA

Protein sequence

MAKHNFHFRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDNILPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQGSPLMLSLYPHYAYAYTRYTNNISLGYATFTSQT

Homology

[Close]

BLAST of CsGy1G029040 vs. NCBI nr
Match: XP_011648543.1 (PREDICTED: glucan endo-1,3-beta-glucosidase-like [Cucumis sativus])

HSP 1 Score: 285.4 bits (729), Expect = 1.2e-73
Identity = 143/158 (90.51%), Postives = 149/158 (94.30%), Query Frame = 0


Query: 4   HNFHFRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPG 63
           H+  + G ++  SFSVPGALITNQATNDTTVEEWFVKYVVPFI EFTINYIVVGDKVIPG
Sbjct: 51  HDHFYVGDWL-FSFSVPGALITNQATNDTTVEEWFVKYVVPFIGEFTINYIVVGDKVIPG 110

Query: 64  LNDNILPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQF 123
           LNDNILPVMKSLQNLLNSRYLGQVKITTMVGL ALGVQ+PPSSGAFDPNVLENMKGIL+F
Sbjct: 111 LNDNILPVMKSLQNLLNSRYLGQVKITTMVGLTALGVQSPPSSGAFDPNVLENMKGILKF 170

Query: 124 LWGQGSPLMLSLYPHYAYAYTRYTNNISLGYATFTSQT 162
           LWGQGSPLMLSLYPHYAYAYT YTNNISLGYATFTSQT
Sbjct: 171 LWGQGSPLMLSLYPHYAYAYTGYTNNISLGYATFTSQT 207

[Close]

BLAST of CsGy1G029040 vs. NCBI nr
Match: XP_004153772.2 (PREDICTED: lichenase-2-like [Cucumis sativus] >KGN63237.1 hypothetical protein Csa_2G416760 [Cucumis sativus])

HSP 1 Score: 277.7 bits (709), Expect = 2.5e-71
Identity = 139/154 (90.26%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 8   FRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDN 67
           FRGT IEVSFSVPG LI NQATN T VEEWFVKYVVPFI EFTINYIVVGDKVIPGL+DN
Sbjct: 71  FRGTNIEVSFSVPGELIINQATNQTAVEEWFVKYVVPFIGEFTINYIVVGDKVIPGLDDN 130

Query: 68  ILPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQ 127
           ILPVM+SLQ+LLNSRYLGQVKITTMVGL ALGVQ+PPSSGAFDPNVLENMKGIL+FLWGQ
Sbjct: 131 ILPVMRSLQDLLNSRYLGQVKITTMVGLTALGVQSPPSSGAFDPNVLENMKGILKFLWGQ 190

Query: 128 GSPLMLSLYPHYAYAYTRYTNNISLGYATFTSQT 162
           GSPLMLSLYP+ AYAYT YTNNISLGYATFTSQT
Sbjct: 191 GSPLMLSLYPYDAYAYTGYTNNISLGYATFTSQT 224

[Close]

BLAST of CsGy1G029040 vs. NCBI nr
Match: KGN66290.1 (hypothetical protein Csa_1G595910 [Cucumis sativus])

HSP 1 Score: 276.2 bits (705), Expect = 7.2e-71
Identity = 138/153 (90.20%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 9   RGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDNI 68
           RGT IEVSFSVPG LI+NQATN T VEEWFVKYVVPFI EFTINYIVVGDKVIPGL+DNI
Sbjct: 7   RGTNIEVSFSVPGELISNQATNHTAVEEWFVKYVVPFIGEFTINYIVVGDKVIPGLDDNI 66

Query: 69  LPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQG 128
           LPVM+SLQ+LLNSRYLGQVKITTMVGL ALGVQ+PPSSGAFDPNVLENMKGIL+FLWGQG
Sbjct: 67  LPVMRSLQDLLNSRYLGQVKITTMVGLTALGVQSPPSSGAFDPNVLENMKGILKFLWGQG 126

Query: 129 SPLMLSLYPHYAYAYTRYTNNISLGYATFTSQT 162
           SPLMLSLYP+ AYAYT YTNNISLGYATFTSQT
Sbjct: 127 SPLMLSLYPYDAYAYTGYTNNISLGYATFTSQT 159

[Close]

BLAST of CsGy1G029040 vs. NCBI nr
Match: XP_004144115.2 (PREDICTED: lichenase-2-like [Cucumis sativus])

HSP 1 Score: 276.2 bits (705), Expect = 7.2e-71
Identity = 138/153 (90.20%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 9   RGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDNI 68
           RGT IEVSFSVPG LI+NQATN T VEEWFVKYVVPFI EFTINYIVVGDKVIPGL+DNI
Sbjct: 7   RGTNIEVSFSVPGELISNQATNHTAVEEWFVKYVVPFIGEFTINYIVVGDKVIPGLDDNI 66

Query: 69  LPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQG 128
           LPVM+SLQ+LLNSRYLGQVKITTMVGL ALGVQ+PPSSGAFDPNVLENMKGIL+FLWGQG
Sbjct: 67  LPVMRSLQDLLNSRYLGQVKITTMVGLTALGVQSPPSSGAFDPNVLENMKGILKFLWGQG 126

Query: 129 SPLMLSLYPHYAYAYTRYTNNISLGYATFTSQT 162
           SPLMLSLYP+ AYAYT YTNNISLGYATFTSQT
Sbjct: 127 SPLMLSLYPYDAYAYTGYTNNISLGYATFTSQT 159

[Close]

BLAST of CsGy1G029040 vs. NCBI nr
Match: XP_022136187.1 (probable glucan endo-1,3-beta-glucosidase BG5 [Momordica charantia])

HSP 1 Score: 176.8 bits (447), Expect = 5.9e-41
Identity = 91/155 (58.71%), Postives = 117/155 (75.48%), Query Frame = 0


Query: 8   FRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDN 67
           F G  I++SF VP  ++ N   N++ V EWF  YV P+I +F INYI+VG+K IPGL+D 
Sbjct: 67  FCGAGIDISFGVPNDMLINMKANESAVVEWFNTYVEPYIGDFVINYIIVGNKAIPGLDDC 126

Query: 68  ILPVMKSLQNLLNSRYLGQVKITTMVGL-AALGVQTPPSSGAFDPNVLENMKGILQFLWG 127
           ILPVMKSLQNLLN+RYLGQVK+TT+VG  AAL V+ PPSSGAFDPN  +N++ IL+FL  
Sbjct: 127 ILPVMKSLQNLLNARYLGQVKLTTLVGYNAALAVKDPPSSGAFDPNASDNIREILRFLLR 186

Query: 128 QGSPLMLSLYPHYAYAYTRYTNNISLGYATFTSQT 162
           +GSPLM+S+ P+  YAY+     ISL YATF ++T
Sbjct: 187 EGSPLMVSVCPYTKYAYS--NRAISLNYATFGAKT 219

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BLAST of CsGy1G029040 vs. TAIR10
Match: AT5G20390.1 (Glycosyl hydrolase superfamily protein)

HSP 1 Score: 95.1 bits (235), Expect = 4.1e-20
Identity = 57/154 (37.01%), Postives = 88/154 (57.14%), Query Frame = 0


Query: 8   FRGT-YIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPG-LN 67
           FRG   I V   V    +   + ++  V  WFV  + P++ +  I +I VG++VIPG + 
Sbjct: 75  FRGNRNIGVMVDVKNQDLEALSVSEEAVNTWFVTNIEPYLADVNITFIAVGNEVIPGEIG 134

Query: 68  DNILPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLW 127
             +LPVMKSL N++ SR L  + I+T V +  LG   PPS+G F P   E +  +L+FL 
Sbjct: 135 SYVLPVMKSLTNIVKSRSL-PILISTTVAMTNLGQSYPPSAGDFMPQAREQLTPVLKFLS 194

Query: 128 GQGSPLMLSLYPHYAYAYTRYTNNISLGYATFTS 160
              +P+++++YP++AYA      NI L YA F +
Sbjct: 195 QTNTPILVNIYPYFAYAADPI--NIQLDYAIFNT 225

[Close]

BLAST of CsGy1G029040 vs. TAIR10
Match: AT5G20330.1 (beta-1,3-glucanase 4)

HSP 1 Score: 89.0 bits (219), Expect = 3.0e-18
Identity = 51/150 (34.00%), Postives = 88/150 (58.67%), Query Frame = 0


Query: 13  IEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPG-LNDNILPV 72
           IEV+  V    +   A ++  V+ WF   +  ++ +  I +I VG++VIPG +   +LPV
Sbjct: 82  IEVTVGVKDQDLAALAASEEAVKGWFAANIESYLADVNITFITVGNEVIPGPIGPQVLPV 141

Query: 73  MKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQGSPL 132
           M+SL NL+ SR L  + I+T+V ++ L    PPS+G F     E +  +L+ L    +P+
Sbjct: 142 MQSLTNLVKSRNL-PISISTVVAMSNLEQSYPPSAGMFTSQAREQLVPVLKLLSQTSTPI 201

Query: 133 MLSLYPHYAYAYTRYTNNISLGYATFTSQT 162
           ++++YP++AYA      NI L YA+F +++
Sbjct: 202 LVNIYPYFAYASD--PANIRLDYASFNTKS 228

[Close]

BLAST of CsGy1G029040 vs. TAIR10
Match: AT5G20340.1 (beta-1,3-glucanase 5)

HSP 1 Score: 87.4 bits (215), Expect = 8.6e-18
Identity = 50/149 (33.56%), Postives = 86/149 (57.72%), Query Frame = 0


Query: 13  IEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPG-LNDNILPV 72
           I V+  V    +   + ++  V+ WF   + P++ +  I +I VG++VIPG +   +LPV
Sbjct: 91  IAVTVGVRDQDLAALSASEEAVKGWFATNIEPYLSDINIAFITVGNEVIPGPIGPQVLPV 150

Query: 73  MKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQGSPL 132
           M+SL NL+ SR L  + I+T+V +  L    PPS+G F     E +  +L+ L    SP+
Sbjct: 151 MQSLTNLVKSRNL-PISISTVVAMWNLEQSYPPSAGMFTSQAREQLVPVLKLLSQTNSPI 210

Query: 133 MLSLYPHYAYAYTRYTNNISLGYATFTSQ 161
           ++ +YP+++YA     ++I L YATF ++
Sbjct: 211 LVKIYPYFSYASD--PSSIRLDYATFNTE 236

[Close]

BLAST of CsGy1G029040 vs. TAIR10
Match: AT1G33220.1 (Glycosyl hydrolase superfamily protein)

HSP 1 Score: 85.1 bits (209), Expect = 4.3e-17
Identity = 50/149 (33.56%), Postives = 85/149 (57.05%), Query Frame = 0


Query: 13  IEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPG-LNDNILPV 72
           IEV+  V    +   + N+  V+ WF   + P++ +  I +I VG++VIPG +   +LPV
Sbjct: 82  IEVTVGVRDQDLGALSANEEAVKGWFATNIEPYLADVNIAFITVGNEVIPGPIGPQVLPV 141

Query: 73  MKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQGSPL 132
           M+SL  L+ S  L  + I+T+V ++ L    PPS+G F     E +  +L+ L    +P+
Sbjct: 142 MQSLTILVKSMNL-PISISTVVAMSNLEQSYPPSAGEFTSQAREQLVPVLKLLSQTSTPI 201

Query: 133 MLSLYPHYAYAYTRYTNNISLGYATFTSQ 161
           ++++YP++ YA      NI L YATF ++
Sbjct: 202 LVNIYPYFPYASD--PTNIPLDYATFNTK 227

[Close]

BLAST of CsGy1G029040 vs. TAIR10
Match: AT3G57260.1 (beta-1,3-glucanase 2)

HSP 1 Score: 80.1 bits (196), Expect = 1.4e-15
Identity = 47/153 (30.72%), Postives = 85/153 (55.56%), Query Frame = 0


Query: 9   RGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDNI 68
           RG+ IE+   VP + +   A++ T  ++W  + V  + D     YI VG++V P +   +
Sbjct: 75  RGSDIELILDVPSSDLERLASSQTEADKWVQENVQSYRDGVRFRYINVGNEVKPSVGGFL 134

Query: 69  LPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQG 128
           L  M++++N ++   L +VK++T +        +PPS G F       ++ ++ FL  + 
Sbjct: 135 LQAMQNIENAVSGAGL-EVKVSTAIATDTTTDTSPPSQGRFRDEYKSFLEPVIGFLASKQ 194

Query: 129 SPLMLSLYPHYAYAYTRYTNNISLGYATFTSQT 162
           SPL+++LYP+++Y     T NI L YA FT+Q+
Sbjct: 195 SPLLVNLYPYFSYMGD--TANIHLDYALFTAQS 224

[Close]

BLAST of CsGy1G029040 vs. Swiss-Prot
Match: sp|A7PQW3|E13B_VITVI (Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00120 PE=1 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-17
Identity = 57/157 (36.31%), Postives = 87/157 (55.41%), Query Frame = 0


Query: 9   RGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIP-GLN-- 68
           RG+ IE+   VP   + + A++ +    W    VV +  E    YI VG++V+P G N  
Sbjct: 73  RGSDIELILDVPNTDLQSLASDASAAATWVQNNVVNYASEVKFRYIAVGNEVLPTGSNAQ 132

Query: 69  --DNILPVMKSLQNLLNSRYL-GQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQ 128
               +LP MK++Q+ + S  L  Q+K++T    A LG   PPS G+F  +V   +  I+ 
Sbjct: 133 YAQYVLPAMKNVQSAITSAGLQDQIKVSTATFSAVLGKSYPPSEGSFSDDVSSFINPIIS 192

Query: 129 FLWGQGSPLMLSLYPHYAYAYTRYTNNISLGYATFTS 160
           FL   GSPL+ ++YP+  ++YT  T NI L YA FT+
Sbjct: 193 FLAENGSPLLANIYPY--FSYTGDTQNIRLDYALFTA 227

[Close]

BLAST of CsGy1G029040 vs. Swiss-Prot
Match: sp|P12257|GUB2_HORVU (Lichenase-2 (Fragment) OS=Hordeum vulgare OX=4513 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.8e-17
Identity = 51/150 (34.00%), Postives = 82/150 (54.67%), Query Frame = 0


Query: 10  GTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDNIL 69
           GT I V    P  +++N A +      W VK  +    + +  Y+ VG++V  G   N++
Sbjct: 51  GTGINVVVGAPNDVLSNLAASPAAAASW-VKSNIQAYPKVSFRYVCVGNEVAGGATRNLV 110

Query: 70  PVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQGS 129
           P MK++   L +  LG +K+TT V  A LGV +PPS+G+F       M  ++QFL    +
Sbjct: 111 PAMKNVHGALVAAGLGHIKVTTSVSQAILGVFSPPSAGSFTGEAAAFMGPVVQFLARTNA 170

Query: 130 PLMLSLYPHYAYAYTRYTNNISLGYATFTS 160
           PLM ++YP+ A+AY    + + +GYA F +
Sbjct: 171 PLMANIYPYLAWAYN--PSAMDMGYALFNA 197

[Close]

BLAST of CsGy1G029040 vs. Swiss-Prot
Match: sp|O49352|BG4_ARATH (Probable glucan endo-1,3-beta-glucosidase BG4 OS=Arabidopsis thaliana OX=3702 GN=BG4 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 5.3e-17
Identity = 51/150 (34.00%), Postives = 88/150 (58.67%), Query Frame = 0


Query: 13  IEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPG-LNDNILPV 72
           IEV+  V    +   A ++  V+ WF   +  ++ +  I +I VG++VIPG +   +LPV
Sbjct: 82  IEVTVGVKDQDLAALAASEEAVKGWFAANIESYLADVNITFITVGNEVIPGPIGPQVLPV 141

Query: 73  MKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQGSPL 132
           M+SL NL+ SR L  + I+T+V ++ L    PPS+G F     E +  +L+ L    +P+
Sbjct: 142 MQSLTNLVKSRNL-PISISTVVAMSNLEQSYPPSAGMFTSQAREQLVPVLKLLSQTSTPI 201

Query: 133 MLSLYPHYAYAYTRYTNNISLGYATFTSQT 162
           ++++YP++AYA      NI L YA+F +++
Sbjct: 202 LVNIYPYFAYASD--PANIRLDYASFNTKS 228

[Close]

BLAST of CsGy1G029040 vs. Swiss-Prot
Match: sp|O49353|BG5_ARATH (Probable glucan endo-1,3-beta-glucosidase BG5 OS=Arabidopsis thaliana OX=3702 GN=BG5 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.6e-16
Identity = 50/149 (33.56%), Postives = 86/149 (57.72%), Query Frame = 0


Query: 13  IEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPG-LNDNILPV 72
           I V+  V    +   + ++  V+ WF   + P++ +  I +I VG++VIPG +   +LPV
Sbjct: 91  IAVTVGVRDQDLAALSASEEAVKGWFATNIEPYLSDINIAFITVGNEVIPGPIGPQVLPV 150

Query: 73  MKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQGSPL 132
           M+SL NL+ SR L  + I+T+V +  L    PPS+G F     E +  +L+ L    SP+
Sbjct: 151 MQSLTNLVKSRNL-PISISTVVAMWNLEQSYPPSAGMFTSQAREQLVPVLKLLSQTNSPI 210

Query: 133 MLSLYPHYAYAYTRYTNNISLGYATFTSQ 161
           ++ +YP+++YA     ++I L YATF ++
Sbjct: 211 LVKIYPYFSYASD--PSSIRLDYATFNTE 236

[Close]

BLAST of CsGy1G029040 vs. Swiss-Prot
Match: sp|P52407|E13B_HEVBR (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Hevea brasiliensis OX=3981 GN=HGN1 PE=1 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 1.7e-15
Identity = 54/158 (34.18%), Postives = 84/158 (53.16%), Query Frame = 0


Query: 9   RGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIP------ 68
           RG+ IE+   VP + +    TN +  + W  K V  F       YI VG+++ P      
Sbjct: 81  RGSNIELILGVPNSDL-QSLTNPSNAKSWVQKNVRGFWSSVLFRYIAVGNEISPVNRGTA 140

Query: 69  GLNDNILPVMKSLQNLLNSRYL-GQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGIL 128
            L   +LP M+++ + + S  L  Q+K++T + L  +G   PPS+GAF  +V   +  I+
Sbjct: 141 WLAQFVLPAMRNIHDAIRSAGLQDQIKVSTAIDLTLVGNSYPPSAGAFRDDVRSYLDPII 200

Query: 129 QFLWGQGSPLMLSLYPHYAYAYTRYTNNISLGYATFTS 160
            FL    SPL+ ++YP++ YAY     +ISL YA FTS
Sbjct: 201 GFLSSIRSPLLANIYPYFTYAYN--PRDISLPYALFTS 235

[Close]

BLAST of CsGy1G029040 vs. TrEMBL
Match: tr|A0A0A0LR03|A0A0A0LR03_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G416760 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.6e-71
Identity = 139/154 (90.26%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 8   FRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDN 67
           FRGT IEVSFSVPG LI NQATN T VEEWFVKYVVPFI EFTINYIVVGDKVIPGL+DN
Sbjct: 71  FRGTNIEVSFSVPGELIINQATNQTAVEEWFVKYVVPFIGEFTINYIVVGDKVIPGLDDN 130

Query: 68  ILPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQ 127
           ILPVM+SLQ+LLNSRYLGQVKITTMVGL ALGVQ+PPSSGAFDPNVLENMKGIL+FLWGQ
Sbjct: 131 ILPVMRSLQDLLNSRYLGQVKITTMVGLTALGVQSPPSSGAFDPNVLENMKGILKFLWGQ 190

Query: 128 GSPLMLSLYPHYAYAYTRYTNNISLGYATFTSQT 162
           GSPLMLSLYP+ AYAYT YTNNISLGYATFTSQT
Sbjct: 191 GSPLMLSLYPYDAYAYTGYTNNISLGYATFTSQT 224

[Close]

BLAST of CsGy1G029040 vs. TrEMBL
Match: tr|A0A0A0LWM4|A0A0A0LWM4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G595910 PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.8e-71
Identity = 138/153 (90.20%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 9   RGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDNI 68
           RGT IEVSFSVPG LI+NQATN T VEEWFVKYVVPFI EFTINYIVVGDKVIPGL+DNI
Sbjct: 7   RGTNIEVSFSVPGELISNQATNHTAVEEWFVKYVVPFIGEFTINYIVVGDKVIPGLDDNI 66

Query: 69  LPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQG 128
           LPVM+SLQ+LLNSRYLGQVKITTMVGL ALGVQ+PPSSGAFDPNVLENMKGIL+FLWGQG
Sbjct: 67  LPVMRSLQDLLNSRYLGQVKITTMVGLTALGVQSPPSSGAFDPNVLENMKGILKFLWGQG 126

Query: 129 SPLMLSLYPHYAYAYTRYTNNISLGYATFTSQT 162
           SPLMLSLYP+ AYAYT YTNNISLGYATFTSQT
Sbjct: 127 SPLMLSLYPYDAYAYTGYTNNISLGYATFTSQT 159

[Close]

BLAST of CsGy1G029040 vs. TrEMBL
Match: tr|A0A1S3BQX5|A0A1S3BQX5_CUCME (probable glucan endo-1,3-beta-glucosidase BG5 OS=Cucumis melo OX=3656 GN=LOC103492533 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.8e-39
Identity = 86/149 (57.72%), Postives = 112/149 (75.17%), Query Frame = 0


Query: 8   FRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDN 67
           FRG+ I++SFSVP  ++T+ ATN   VEEWF  Y+ PF+D+F INYI+VGDK +PGL++ 
Sbjct: 71  FRGSNIDLSFSVPNDMLTDMATNKALVEEWFNTYIKPFVDDFKINYIIVGDKAVPGLDNF 130

Query: 68  ILPVMKSLQNLLNSRYLGQVKITTMVGL-AALGVQTPPSSGAFDPNVLENMKGILQFLWG 127
           ILPVM SLQ+LLN+ Y GQVK+TT+VG  AAL  Q PPSSG F+P V ENM+GIL+FL  
Sbjct: 131 ILPVMMSLQDLLNANYFGQVKLTTLVGYNAALVSQDPPSSGVFNPTVRENMRGILKFLAE 190

Query: 128 QGSPLMLSLYPHYAYAYTRYTNNISLGYA 156
           +GS LM+S++PH  Y   +    +SL YA
Sbjct: 191 EGSALMVSVFPHRQY---KSNGGMSLNYA 216

[Close]

BLAST of CsGy1G029040 vs. TrEMBL
Match: tr|A0A0A0LZ10|A0A0A0LZ10_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G595900 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.9e-36
Identity = 84/151 (55.63%), Postives = 107/151 (70.86%), Query Frame = 0


Query: 8   FRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDN 67
           FRG  I+VSF +P  ++T+ A N   VEEWF  YV  F+D+F INYI+VGDK IP   + 
Sbjct: 70  FRGGAIDVSFGIPNNMLTDLANNKGLVEEWFNTYVKTFVDDFRINYIIVGDKAIPSHANF 129

Query: 68  ILPVMKSLQNLLNSRYLGQVKITTMVGL-AALGVQTPPSSGAFDPNVLENMKGILQFLWG 127
           ILP+M SLQ+LLN+ YLGQVK+TT+VG  AAL  + PPSSG FDP V E+M+GIL+FL  
Sbjct: 130 ILPIMMSLQDLLNANYLGQVKLTTLVGYNAALVSKDPPSSGTFDPTVRESMRGILKFLAE 189

Query: 128 QGSPLMLSLYPHYAYAYTRYTNNISLGYATF 158
           +GS LM+S++PH  Y    +   ISL YA F
Sbjct: 190 EGSALMVSVFPHQKY---EFNGGISLNYAIF 217

[Close]

BLAST of CsGy1G029040 vs. TrEMBL
Match: tr|A0A1S3BQU9|A0A1S3BQU9_CUCME (probable glucan endo-1,3-beta-glucosidase BG4 OS=Cucumis melo OX=3656 GN=LOC103492534 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 5.1e-33
Identity = 73/90 (81.11%), Postives = 81/90 (90.00%), Query Frame = 0


Query: 72  MKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQGSPL 131
           MKSLQ+LLN  YLGQVKITTMVGL ALGVQTPPS+G FDPN+ E+M+GIL FL GQGSPL
Sbjct: 1   MKSLQDLLNRHYLGQVKITTMVGLTALGVQTPPSTGVFDPNIFESMRGILHFLRGQGSPL 60

Query: 132 MLSLYPHYAYAYTRYTNNISLGYATFTSQT 162
           MLSLYP+ AYAY+ YTNNI+LGYATFTSQT
Sbjct: 61  MLSLYPYQAYAYSGYTNNITLGYATFTSQT 90

The following BLAST results are available for this feature:

BLAST of CsGy1G029040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648543.1	1.2e-73	90.51	PREDICTED: glucan endo-1,3-beta-glucosidase-like [Cucumis sativus]	[more]
XP_004153772.2	2.5e-71	90.26	PREDICTED: lichenase-2-like [Cucumis sativus] >KGN63237.1 hypothetical protein C...	[more]
KGN66290.1	7.2e-71	90.20	hypothetical protein Csa_1G595910 [Cucumis sativus]	[more]
XP_004144115.2	7.2e-71	90.20	PREDICTED: lichenase-2-like [Cucumis sativus]	[more]
XP_022136187.1	5.9e-41	58.71	probable glucan endo-1,3-beta-glucosidase BG5 [Momordica charantia]	[more]

BLAST of CsGy1G029040 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20390.1	4.1e-20	37.01	Glycosyl hydrolase superfamily protein	[more]
AT5G20330.1	3.0e-18	34.00	beta-1,3-glucanase 4	[more]
AT5G20340.1	8.6e-18	33.56	beta-1,3-glucanase 5	[more]
AT1G33220.1	4.3e-17	33.56	Glycosyl hydrolase superfamily protein	[more]
AT3G57260.1	1.4e-15	30.72	beta-1,3-glucanase 2	[more]

BLAST of CsGy1G029040 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A7PQW3\|E13B_VITVI	1.1e-17	36.31	Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00120...	[more]
sp\|P12257\|GUB2_HORVU	1.8e-17	34.00	Lichenase-2 (Fragment) OS=Hordeum vulgare OX=4513 PE=1 SV=1	[more]
sp\|O49352\|BG4_ARATH	5.3e-17	34.00	Probable glucan endo-1,3-beta-glucosidase BG4 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|O49353\|BG5_ARATH	1.6e-16	33.56	Probable glucan endo-1,3-beta-glucosidase BG5 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|P52407\|E13B_HEVBR	1.7e-15	34.18	Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Hevea brasiliensis O...	[more]

BLAST of CsGy1G029040 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LR03\|A0A0A0LR03_CUCSA	1.6e-71	90.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G416760 PE=3 SV=1	[more]
tr\|A0A0A0LWM4\|A0A0A0LWM4_CUCSA	4.8e-71	90.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G595910 PE=3 SV=1	[more]
tr\|A0A1S3BQX5\|A0A1S3BQX5_CUCME	2.8e-39	57.72	probable glucan endo-1,3-beta-glucosidase BG5 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A0A0LZ10\|A0A0A0LZ10_CUCSA	2.9e-36	55.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G595900 PE=3 SV=1	[more]
tr\|A0A1S3BQU9\|A0A1S3BQU9_CUCME	5.1e-33	81.11	probable glucan endo-1,3-beta-glucosidase BG4 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR017853	Glycoside_hydrolase_SF
IPR000490	Glyco_hydro_17

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G029040.1	CsGy1G029040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.20.20.80		coord: 4..161 e-value: 8.3E-37 score: 128.8
None	No IPR available	PANTHER	PTHR32227:SF103	CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN-RELATED	coord: 9..158
None	No IPR available	PANTHER	PTHR32227	FAMILY NOT NAMED	coord: 9..158
IPR000490	Glycoside hydrolase family 17	PFAM	PF00332	Glyco_hydro_17	coord: 8..161 e-value: 2.0E-23 score: 83.2
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	SSF51445	(Trans)glycosidases	coord: 8..159

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G029040	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G029040	Watermelon (97103) v2	cgybwmbB041
CsGy1G029040	Wax gourd	cgybwgoB079
CsGy1G029040	Cucurbita maxima (Rimu)	cgybcmaB013
CsGy1G029040	Cucurbita maxima (Rimu)	cgybcmaB027
CsGy1G029040	Cucurbita moschata (Rifu)	cgybcmoB013
CsGy1G029040	Cucurbita moschata (Rifu)	cgybcmoB027
CsGy1G029040	Cucurbita moschata (Rifu)	cgybcmoB110
CsGy1G029040	Cucurbita pepo (Zucchini)	cgybcpeB039
CsGy1G029040	Cucurbita pepo (Zucchini)	cgybcpeB125
CsGy1G029040	Cucurbita pepo (Zucchini)	cgybcpeB137
CsGy1G029040	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G029040	Bottle gourd (USVL1VR-Ls)	cgyblsiB055
CsGy1G029040	Melon (DHL92) v3.5.1	cgybmeB038
CsGy1G029040	Melon (DHL92) v3.6.1	cgybmedB032
CsGy1G029040	Watermelon (Charleston Gray)	cgybwcgB043
CsGy1G029040	Watermelon (97103) v1	cgybwmB022
CsGy1G029040	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G029040	Silver-seed gourd	carcgybB0186
CsGy1G029040	Silver-seed gourd	carcgybB0475
CsGy1G029040	Silver-seed gourd	carcgybB0905