CsGy1G028830 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G028830
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionMucin-related protein
LocationChr1 : 26888997 .. 26889492 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAAACTGTAACCAGTTCTTCGATAACAGAACTGGTGTCATTGCATTGTTTGCAATAGAAAATGATTAATGAATGGTTGAAAATTTGATGTTACAATCTTAAAACATTCTTTAATCAAGGATACCTTCTCATTGTTTCCCTCTGCACTGTTGCTTCTTCAAAGGAACAATCTAGTATGAGATTCCATTGATTTTTGAACTCATTGCTTCGGATTTTCTATTCATTTTATGAAACTTTCTCTCTTGAGTGTATCCATTACCGAGTTCCTTGGTTTCATATGCAGATTGCTAGTTTCATCAAGACCCATATATTTAGTCGTCGGAGACCAATCGATGGATGGAAATACATGATAGAGGAATTTGGGCCAAATGCCAAGAAAGGAAAAGGTAGTGTTTCAAGGTTGCCTAATCTTTCTGATTCTTCAACCCAACCCTTCAAGGAGGAAAAAGTTGTAGCCTCCCCTTCTCTCAAACCCTTAAGAAGGAGTTAA

mRNA sequence

ATGGAAGAAAACTGTAACCAGTTCTTCGATAACAGAACTGGTGATACCTTCTCATTGTTTCCCTCTGCACTGTTGCTTCTTCAAAGGAACAATCTATGTATCCATTACCGAGTTCCTTGGTTTCATATGCAGATTGCTAGTTTCATCAAGACCCATATATTTAGTCGTCGGAGACCAATCGATGGATGGAAATACATGATAGAGGAATTTGGGCCAAATGCCAAGAAAGGAAAAGGTAGTGTTTCAAGGTTGCCTAATCTTTCTGATTCTTCAACCCAACCCTTCAAGGAGGAAAAAGTTGTAGCCTCCCCTTCTCTCAAACCCTTAAGAAGGAGTTAA

Coding sequence (CDS)

ATGGAAGAAAACTGTAACCAGTTCTTCGATAACAGAACTGGTGATACCTTCTCATTGTTTCCCTCTGCACTGTTGCTTCTTCAAAGGAACAATCTATGTATCCATTACCGAGTTCCTTGGTTTCATATGCAGATTGCTAGTTTCATCAAGACCCATATATTTAGTCGTCGGAGACCAATCGATGGATGGAAATACATGATAGAGGAATTTGGGCCAAATGCCAAGAAAGGAAAAGGTAGTGTTTCAAGGTTGCCTAATCTTTCTGATTCTTCAACCCAACCCTTCAAGGAGGAAAAAGTTGTAGCCTCCCCTTCTCTCAAACCCTTAAGAAGGAGTTAA

Protein sequence

MEENCNQFFDNRTGDTFSLFPSALLLLQRNNLCIHYRVPWFHMQIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPNLSDSSTQPFKEEKVVASPSLKPLRRS
Homology
[Close]
BLAST of CsGy1G028830 vs. NCBI nr
Match: XP_004144093.1 (PREDICTED: uncharacterized protein LOC101222958 [Cucumis sativus] >KGN66392.1 hypothetical protein Csa_1G600820 [Cucumis sativus])

HSP 1 Score: 142.9 bits (359), Expect = 6.6e-31
Identity = 70/76 (92.11%), Postives = 72/76 (94.74%), Query Frame = 0 

Query: 37  RVPWFHMQIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPNLSDSSTQPFK 96
           R+ +   QIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPNLSDSSTQPFK
Sbjct: 258 RIAYNKFQIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPNLSDSSTQPFK 317

Query: 97  EEKVVASPSLKPLRRS 113
           EEKVVASPSLKPLRRS
Sbjct: 318 EEKVVASPSLKPLRRS 333

[Close]
BLAST of CsGy1G028830 vs. NCBI nr
Match: XP_008451050.1 (PREDICTED: uncharacterized protein LOC103492453 [Cucumis melo])

HSP 1 Score: 141.4 bits (355), Expect = 1.9e-30
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 0 

Query: 37  RVPWFHMQIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPNLSDSSTQPFK 96
           R+ +   QIASFIK+HIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPNLSDSSTQPFK
Sbjct: 260 RIAYNKFQIASFIKSHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPNLSDSSTQPFK 319

Query: 97  EEKVVASPSLKPLRRS 113
           EEKVVASPSLKPLRRS
Sbjct: 320 EEKVVASPSLKPLRRS 335

[Close]
BLAST of CsGy1G028830 vs. NCBI nr
Match: XP_022147746.1 (uncharacterized protein LOC111016606 [Momordica charantia])

HSP 1 Score: 134.8 bits (338), Expect = 1.8e-28
Identity = 65/75 (86.67%), Postives = 69/75 (92.00%), Query Frame = 0 

Query: 37  RVPWFHMQIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPNLSDSSTQPFK 96
           R+ +   QIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLP+LSDSSTQPFK
Sbjct: 254 RIAYNKFQIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPSLSDSSTQPFK 313

Query: 97  EEKVVASPSLKPLRR 112
           EEKV ASPSL PL+R
Sbjct: 314 EEKVAASPSLSPLKR 328

[Close]
BLAST of CsGy1G028830 vs. NCBI nr
Match: XP_022988172.1 (uncharacterized protein LOC111485489 [Cucurbita maxima])

HSP 1 Score: 134.0 bits (336), Expect = 3.1e-28
Identity = 64/75 (85.33%), Postives = 68/75 (90.67%), Query Frame = 0 

Query: 37  RVPWFHMQIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPNLSDSSTQPFK 96
           R+ +   QIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSR+PNLSDSSTQPFK
Sbjct: 257 RIAYNKFQIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRMPNLSDSSTQPFK 316

Query: 97  EEKVVASPSLKPLRR 112
           EEKV ASPS  PL+R
Sbjct: 317 EEKVAASPSFTPLKR 331

[Close]
BLAST of CsGy1G028830 vs. NCBI nr
Match: XP_023515378.1 (uncharacterized protein LOC111779550 [Cucurbita pepo subsp. pepo] >XP_023515379.1 uncharacterized protein LOC111779550 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 131.3 bits (329), Expect = 2.0e-27
Identity = 63/75 (84.00%), Postives = 68/75 (90.67%), Query Frame = 0 

Query: 37  RVPWFHMQIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPNLSDSSTQPFK 96
           R+ +   QIASFIKTHIFSRRRP+DGWKYMIEEFGPNAKKGKGSVSR+PNLSDSSTQPFK
Sbjct: 255 RIAYNKFQIASFIKTHIFSRRRPLDGWKYMIEEFGPNAKKGKGSVSRMPNLSDSSTQPFK 314

Query: 97  EEKVVASPSLKPLRR 112
           EEKV ASPSL  L+R
Sbjct: 315 EEKVAASPSLTRLKR 329

[Close]
BLAST of CsGy1G028830 vs. TAIR10
Match: AT2G02880.1 (mucin-related)

HSP 1 Score: 103.2 bits (256), Expect = 1.1e-22
Identity = 54/75 (72.00%), Postives = 58/75 (77.33%), Query Frame = 0 

Query: 37  RVPWFHMQIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPNLSDSSTQPFK 96
           R  +   QIASFIK HIFSRRRPIDGWKYMIE  GPNA+KGKGSVSRLP LSD STQPFK
Sbjct: 243 RTAFCKFQIASFIKQHIFSRRRPIDGWKYMIEVIGPNARKGKGSVSRLPALSDVSTQPFK 302

Query: 97  EEKVVASPSLKPLRR 112
           EE    + SL  L+R
Sbjct: 303 EE----TSSLTTLKR 313

[Close]
BLAST of CsGy1G028830 vs. TrEMBL
Match: tr|A0A0A0LZT4|A0A0A0LZT4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600820 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 4.4e-31
Identity = 70/76 (92.11%), Postives = 72/76 (94.74%), Query Frame = 0 

Query: 37  RVPWFHMQIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPNLSDSSTQPFK 96
           R+ +   QIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPNLSDSSTQPFK
Sbjct: 258 RIAYNKFQIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPNLSDSSTQPFK 317

Query: 97  EEKVVASPSLKPLRRS 113
           EEKVVASPSLKPLRRS
Sbjct: 318 EEKVVASPSLKPLRRS 333

[Close]
BLAST of CsGy1G028830 vs. TrEMBL
Match: tr|A0A1S3BQ21|A0A1S3BQ21_CUCME (uncharacterized protein LOC103492453 OS=Cucumis melo OX=3656 GN=LOC103492453 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-30
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 0 

Query: 37  RVPWFHMQIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPNLSDSSTQPFK 96
           R+ +   QIASFIK+HIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPNLSDSSTQPFK
Sbjct: 260 RIAYNKFQIASFIKSHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPNLSDSSTQPFK 319

Query: 97  EEKVVASPSLKPLRRS 113
           EEKVVASPSLKPLRRS
Sbjct: 320 EEKVVASPSLKPLRRS 335

[Close]
BLAST of CsGy1G028830 vs. TrEMBL
Match: tr|A0A200QF21|A0A200QF21_9MAGN (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_9097g111 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.8e-24
Identity = 59/75 (78.67%), Postives = 63/75 (84.00%), Query Frame = 0 

Query: 37  RVPWFHMQIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPNLSDSSTQPFK 96
           R+ +   QIASFIK+HIFSRRRPIDGWKYMIE  GPNAKKGKGSVSRLPNLSDSSTQPFK
Sbjct: 240 RIAFSKFQIASFIKSHIFSRRRPIDGWKYMIEVIGPNAKKGKGSVSRLPNLSDSSTQPFK 299

Query: 97  EEKVVASPSLKPLRR 112
           EEK   S SL P +R
Sbjct: 300 EEKTPMSSSLTPFKR 314

[Close]
BLAST of CsGy1G028830 vs. TrEMBL
Match: tr|A0A2P4L4J8|A0A2P4L4J8_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_42548 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.3e-24
Identity = 58/75 (77.33%), Postives = 63/75 (84.00%), Query Frame = 0 

Query: 37  RVPWFHMQIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPNLSDSSTQPFK 96
           R+ +   QIASFIKTHIFSRRRPIDGWKYMIEE GPNAKKGKGSVSRLP+LSD+STQPFK
Sbjct: 233 RIAYSKFQIASFIKTHIFSRRRPIDGWKYMIEELGPNAKKGKGSVSRLPSLSDASTQPFK 292

Query: 97  EEKVVASPSLKPLRR 112
           EEK      L PL+R
Sbjct: 293 EEKTPLDSRLTPLKR 307

[Close]
BLAST of CsGy1G028830 vs. TrEMBL
Match: tr|A0A2N9J3B2|A0A2N9J3B2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58892 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.0e-24
Identity = 58/74 (78.38%), Postives = 62/74 (83.78%), Query Frame = 0 

Query: 37  RVPWFHMQIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPNLSDSSTQPFK 96
           R+ +   QIASFIKTHIFSRRRPIDGWKYMIEE GPNAKKGKGSVSRLP+LSD+STQPFK
Sbjct: 214 RIAYSKFQIASFIKTHIFSRRRPIDGWKYMIEELGPNAKKGKGSVSRLPSLSDASTQPFK 273

Query: 97  EEKVVASPSLKPLR 111
           EEK      L PLR
Sbjct: 274 EEKTPLDSRLTPLR 287

The following BLAST results are available for this feature:
BLAST of CsGy1G028830 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004144093.16.6e-3192.11PREDICTED: uncharacterized protein LOC101222958 [Cucumis sativus] >KGN66392.1 hy... [more]
XP_008451050.11.9e-3090.79PREDICTED: uncharacterized protein LOC103492453 [Cucumis melo][more]
XP_022147746.11.8e-2886.67uncharacterized protein LOC111016606 [Momordica charantia][more]
XP_022988172.13.1e-2885.33uncharacterized protein LOC111485489 [Cucurbita maxima][more]
XP_023515378.12.0e-2784.00uncharacterized protein LOC111779550 [Cucurbita pepo subsp. pepo] >XP_023515379.... [more]
BLAST of CsGy1G028830 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G02880.11.1e-2272.00mucin-related[more]
BLAST of CsGy1G028830 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G028830 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LZT4|A0A0A0LZT4_CUCSA4.4e-3192.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600820 PE=4 SV=1[more]
tr|A0A1S3BQ21|A0A1S3BQ21_CUCME1.3e-3090.79uncharacterized protein LOC103492453 OS=Cucumis melo OX=3656 GN=LOC103492453 PE=... [more]
tr|A0A200QF21|A0A200QF21_9MAGN1.8e-2478.67Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_9097g111 PE=4 SV=1[more]
tr|A0A2P4L4J8|A0A2P4L4J8_QUESU2.3e-2477.33Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_42548 PE=4 SV=1[more]
tr|A0A2N9J3B2|A0A2N9J3B2_FAGSY3.0e-2478.38Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58892 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G028830.1CsGy1G028830.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..112
NoneNo IPR availablePANTHERPTHR35476FAMILY NOT NAMEDcoord: 36..108
NoneNo IPR availablePANTHERPTHR35476:SF2MUCIN-RELATED PROTEINcoord: 36..108

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G028830Cucurbita maxima (Rimu)cgybcmaB013
CsGy1G028830Cucurbita maxima (Rimu)cgybcmaB027
CsGy1G028830Cucurbita moschata (Rifu)cgybcmoB013
CsGy1G028830Cucurbita moschata (Rifu)cgybcmoB027
CsGy1G028830Cucurbita pepo (Zucchini)cgybcpeB039
CsGy1G028830Cucurbita pepo (Zucchini)cgybcpeB125
CsGy1G028830Cucumber (Chinese Long) v2cgybcuB002
CsGy1G028830Bottle gourd (USVL1VR-Ls)cgyblsiB055
CsGy1G028830Melon (DHL92) v3.5.1cgybmeB038
CsGy1G028830Melon (DHL92) v3.6.1cgybmedB032
CsGy1G028830Watermelon (Charleston Gray)cgybwcgB043
CsGy1G028830Watermelon (97103) v1cgybwmB022
CsGy1G028830Wild cucumber (PI 183967)cgybcpiB002
CsGy1G028830Silver-seed gourdcarcgybB0014
CsGy1G028830Silver-seed gourdcarcgybB0186
CsGy1G028830Cucumber (Chinese Long) v3cgybcucB001
CsGy1G028830Watermelon (97103) v2cgybwmbB041
CsGy1G028830Wax gourdcgybwgoB079