CsGy1G028670 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G028670
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionprotochlorophyllide-dependent translocon component 52, chloroplastic-like
LocationChr1 : 26779414 .. 26781830 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTCATTCACAGCAACTGCTGACAGGGAAGGTGGCAGACCACTTGAATTGGTTGTTGAAAAGTTGAAAGCAGATGGATTTGTTGGCAGACACGAAAGGCTCCGTCACAAGTTTTTTGCACCTTGTGTCTATTATTTTTTCACTGATCCAGAGTTGGTTCAAGGAAATGTAGAGAGCTCCACCAAGAACGATGAAGCCGTATCATCAACTGCAAATGTAAAGGTACATTAGATTAGACAACGGCATAACTGCATTTACATGTTTCTTCTTGCATTGAGTCAATAATTGTTAGATCATCCATCAAATTAAAAAATTAAGCATACGTCCCAAAAGCCTAATTTGTATTCGAATTTATGTTATTTGAGATCTTGGTCCTAAGGTTTAGTGGAGTGCGCTATGTAAATTTTATAACTATACCGTCTTTGAATTTGTAATACGATAATTCCTATCCAATAATAAATTGTTTTTTTTCTAATATGAACACAGCCAACACACTGTTAGTGAACCACGTAAATTTCTGTGACGATTTTCCTGCCCAATATGTTTTTCTTGCCTTCTTTGGTCGTCGATTTCATAACAAACATTCCCTTCATATGTGAGCTTGAAATTTCGTAGAGGTTCAAATTTCGGATCTCGTAGTTATAGTAAATCTCATTTTATCAATACTTCAACTGTAACTCAAACTTAAACATCTGAACTGCATTTTCTTTTGCTTTTCGCTAGTGATTTGGTTTGCTTCATGAAAAGTTTTGTTGGTTCAGAAACCGCCAACAGAAATCTCGCAGCGAAGATCATTTCTGGTTTTCTTCTGCATCCCAGTTAGTCCAGGCAAAAGCAGATTGATATGGGCCTTCCCTAGGAACTTTGGGAAATGGATGAACTATATTGTCCCACGATGGATGTTTCACATAGGGCAGAACTTGATTCTAGATTCAGACATGTATTTTCTTCGTGTTGAGGCAAGACAGTTGATTTGTGGATATTTTATTTGCCTGTCGAATATAGTTTCTGATGAAGTTTGTTCTGAATTTTAGGAGCATAAATATGAGGAAATAGGCCCTTCAAATTGGCATAAAGCTTGTTATGTGCCAGTAAAATCAGATGCTTTGGTTGTTGGATTTAGAAGATGGTTGAACAAGTATGCAGGTGGTCGAGTTGATTGGGGAGGCAAATATTCTGGCTCTCTTCCTCCAATCCCTCCTAGAGAACAGGTGTTCGAAAGGTATCCTCTAATTTCTGAAACTCAACTTCCTCCACTCTCTCATTGCCGACTAGTTTTGAAAAGAACTCCATGTTATCTAATATAATTAGTTTTGAAAAAGAACTCCATGTTATCTAATATGGAATCAAAGTTCATAAAGCCTACTTAAGCATTTGGTTCATAAAGATTTGATTCAAGAATCGGAAACCCAAGAAGGACCATCTTGAGGAGGCATTTTGGAACTTTAGTTCGAATTTGTTAGGACAGCAAACCTTTCACATTTATTTTAACCCACAAACTATAATAACTAATTTATTGCCCTAAACAACCCCTGTTTTGTTTAGTTTAGGTATGATGTTCAATAATTGAGCTTATTTTTTTACAATTTCTTAATTATTTTTTCATCTTTTCCTAAGTAAACACCAGACTTCTTGGCCAAATCATAGAAACAAAAACAAACTTTAATGTAAAAAAAAAATGTGACGACTTAAACTTAACCTCAAAAACCAAAAATCAAATGATTATCTACCTTTACCAAAGGTATTAGGTTTGTCGTTCCATAATTGGTTATTGAATTTCAGGTACTGGAGCCATGTGGTGAATTGCAAGAGCTGCAATGGTGCATACAAAGCTCTAAACATAGCTGAGGTGAGTCTTCAGGCCATCTCCATGGCTGCAATTGGAGCTTTGGCATTGATAAAGCATGGTGTACTTTCAGCAACAGTTAGAGCCACCATTGTCACCGTTGCAATACTCTGTTTTGCTGCTTCAAAGTGGTTATCCCATTTCATCCACAAAACTTTCCACTTCCAAGTTTACAATCATGCCCTGGTTTGACTCTTCTCTTCATATTAGAACTCGATCATTATTTATCTTGTACATAAAGTTATCATATTTTTCATTTGAGAAAGCCCGATAGTTTGAGGTTTTTTTCCAGTGAAATATATATATATATGTATGTATATCTTCTCTTCATGGTAGGAATGGAGGTCGCATTGTCGATGTAGAATGGTAATTGGTACCTTATTCACTCAGCTATATATGGAATGTTTTTAGTTTAGAGATGTATTTATTTATTTTAAATATGAAGTGAAGTGTTTGAACTTCTCAAGTGTGTCACTTGAGTTGGACTTATTTAATTATTTTTATATATAAATATGGACAAAATTGTATGAGCGAAAAGATCTTTATTTTTAAAATGGGAATAGTGGGG

mRNA sequence

ATGTGTTCATTCACAGCAACTGCTGACAGGGAAGGTGGCAGACCACTTGAATTGGTTGTTGAAAAGTTGAAAGCAGATGGATTTGTTGGCAGACACGAAAGGCTCCGTCACAAGTTTTTTGCACCTTGTGTCTATTATTTTTTCACTGATCCAGAGTTGGTTCAAGGAAATGTAGAGAGCTCCACCAAGAACGATGAAGCCGTATCATCAACTGCAAATGTAAAGAAACCGCCAACAGAAATCTCGCAGCGAAGATCATTTCTGGTTTTCTTCTGCATCCCAGTTAGTCCAGGCAAAAGCAGATTGATATGGGCCTTCCCTAGGAACTTTGGGAAATGGATGAACTATATTGTCCCACGATGGATGTTTCACATAGGGCAGAACTTGATTCTAGATTCAGACATGTATTTTCTTCGTGTTGAGGCAAGACAGTTGATTTGTGGATATTTTATTTGCCTGTCGAATATAGTTTCTGATGAAGAGCATAAATATGAGGAAATAGGCCCTTCAAATTGGCATAAAGCTTGTTATGTGCCAGTAAAATCAGATGCTTTGGTTGTTGGATTTAGAAGATGGTTGAACAAGTACTGGAGCCATGTGGTGAATTGCAAGAGCTGCAATGGTGCATACAAAGCTCTAAACATAGCTGAGGTGAGTCTTCAGGCCATCTCCATGGCTGCAATTGGAGCTTTGGCATTGATAAAGCATGGTGTACTTTCAGCAACAGTTAGAGCCACCATTGTCACCGTTGCAATACTCTGTTTTGCTGCTTCAAAGTGGTTATCCCATTTCATCCACAAAACTTTCCACTTCCAAGTTTACAATCATGCCCTGGTTTGACTCTTCTCTTCATATTAGAACTCGATCATTATTTATCTTGTACATAAAGTTATCATATTTTTCATTTGAGAAAGCCCGATAGTTTGAGGTTTTTTTCCAGTGAAATATATATATATATGTATGTATATCTTCTCTTCATGGTAGGAATGGAGGTCGCATTGTCGATGTAGAATGGTAATTGGTACCTTATTCACTCAGCTATATATGGAATGTTTTTAGTTTAGAGATGTATTTATTTATTTTAAATATGAAGTGAAGTGTTTGAACTTCTCAAGTGTGTCACTTGAGTTGGACTTATTTAATTATTTTTATATATAAATATGGACAAAATTGTATGAGCGAAAAGATCTTTATTTTTAAAATGGGAATAGTGGGG

Coding sequence (CDS)

ATGTGTTCATTCACAGCAACTGCTGACAGGGAAGGTGGCAGACCACTTGAATTGGTTGTTGAAAAGTTGAAAGCAGATGGATTTGTTGGCAGACACGAAAGGCTCCGTCACAAGTTTTTTGCACCTTGTGTCTATTATTTTTTCACTGATCCAGAGTTGGTTCAAGGAAATGTAGAGAGCTCCACCAAGAACGATGAAGCCGTATCATCAACTGCAAATGTAAAGAAACCGCCAACAGAAATCTCGCAGCGAAGATCATTTCTGGTTTTCTTCTGCATCCCAGTTAGTCCAGGCAAAAGCAGATTGATATGGGCCTTCCCTAGGAACTTTGGGAAATGGATGAACTATATTGTCCCACGATGGATGTTTCACATAGGGCAGAACTTGATTCTAGATTCAGACATGTATTTTCTTCGTGTTGAGGCAAGACAGTTGATTTGTGGATATTTTATTTGCCTGTCGAATATAGTTTCTGATGAAGAGCATAAATATGAGGAAATAGGCCCTTCAAATTGGCATAAAGCTTGTTATGTGCCAGTAAAATCAGATGCTTTGGTTGTTGGATTTAGAAGATGGTTGAACAAGTACTGGAGCCATGTGGTGAATTGCAAGAGCTGCAATGGTGCATACAAAGCTCTAAACATAGCTGAGGTGAGTCTTCAGGCCATCTCCATGGCTGCAATTGGAGCTTTGGCATTGATAAAGCATGGTGTACTTTCAGCAACAGTTAGAGCCACCATTGTCACCGTTGCAATACTCTGTTTTGCTGCTTCAAAGTGGTTATCCCATTTCATCCACAAAACTTTCCACTTCCAAGTTTACAATCATGCCCTGGTTTGA

Protein sequence

MCSFTATADREGGRPLELVVEKLKADGFVGRHERLRHKFFAPCVYYFFTDPELVQGNVESSTKNDEAVSSTANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIGQNLILDSDMYFLRVEARQLICGYFICLSNIVSDEEHKYEEIGPSNWHKACYVPVKSDALVVGFRRWLNKYWSHVVNCKSCNGAYKALNIAEVSLQAISMAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV
Homology
[Close]
BLAST of CsGy1G028670 vs. NCBI nr
Match: XP_011660064.1 (PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic [Cucumis sativus])

HSP 1 Score: 500.0 bits (1286), Expect = 5.3e-138
Identity = 255/302 (84.44%), Postives = 255/302 (84.44%), Query Frame = 0 

Query: 6   ATADREGGRPLELVVEKLKADGFVGRHERLRHKFFAPCVYYFFTDPELVQGNVESSTKND 65
           ATADREGGRPLELVVEKLKADGFVGRHERLRHKFFAPCVYYFFTDPELVQGNVESSTKND
Sbjct: 308 ATADREGGRPLELVVEKLKADGFVGRHERLRHKFFAPCVYYFFTDPELVQGNVESSTKND 367

Query: 66  EAVSSTANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHI 125
           EAVSSTANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHI
Sbjct: 368 EAVSSTANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHI 427

Query: 126 GQNLILDSDMYFLRVEARQLICGYFICLSNIVSDEEHKYEEIGPSNWHKACYVPVKSDAL 185
           GQNLILDSDMYFLRV                   EEHKYEEIGPSNWHKACYVPVKSDAL
Sbjct: 428 GQNLILDSDMYFLRV-------------------EEHKYEEIGPSNWHKACYVPVKSDAL 487

Query: 186 VVGFRRWLNK----------------------------YWSHVVNCKSCNGAYKALNIAE 245
           VVGFRRWLNK                            YWSHVVNCKSCNGAYKALNIAE
Sbjct: 488 VVGFRRWLNKYAGGRVDWGGKYSGSLPPIPPREQVFERYWSHVVNCKSCNGAYKALNIAE 547

Query: 246 VSLQAISMAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHA 280
           VSLQAISMAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHA
Sbjct: 548 VSLQAISMAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHA 590

[Close]
BLAST of CsGy1G028670 vs. NCBI nr
Match: KGN66378.1 (hypothetical protein Csa_1G600180 [Cucumis sativus])

HSP 1 Score: 490.7 bits (1262), Expect = 3.2e-135
Identity = 250/297 (84.18%), Postives = 250/297 (84.18%), Query Frame = 0 

Query: 11  EGGRPLELVVEKLKADGFVGRHERLRHKFFAPCVYYFFTDPELVQGNVESSTKNDEAVSS 70
           EGGRPLELVVEKLKADGFVGRHERLRHKFFAPCVYYFFTDPELVQGNVESSTKNDEAVSS
Sbjct: 277 EGGRPLELVVEKLKADGFVGRHERLRHKFFAPCVYYFFTDPELVQGNVESSTKNDEAVSS 336

Query: 71  TANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIGQNLI 130
           TANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIGQNLI
Sbjct: 337 TANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIGQNLI 396

Query: 131 LDSDMYFLRVEARQLICGYFICLSNIVSDEEHKYEEIGPSNWHKACYVPVKSDALVVGFR 190
           LDSDMYFLRV                   EEHKYEEIGPSNWHKACYVPVKSDALVVGFR
Sbjct: 397 LDSDMYFLRV-------------------EEHKYEEIGPSNWHKACYVPVKSDALVVGFR 456

Query: 191 RWLNK----------------------------YWSHVVNCKSCNGAYKALNIAEVSLQA 250
           RWLNK                            YWSHVVNCKSCNGAYKALNIAEVSLQA
Sbjct: 457 RWLNKYAGGRVDWGGKYSGSLPPIPPREQVFERYWSHVVNCKSCNGAYKALNIAEVSLQA 516

Query: 251 ISMAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 280
           ISMAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV
Sbjct: 517 ISMAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 554

[Close]
BLAST of CsGy1G028670 vs. NCBI nr
Match: XP_016900972.1 (PREDICTED: LOW QUALITY PROTEIN: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucumis melo])

HSP 1 Score: 426.4 bits (1095), Expect = 7.5e-116
Identity = 223/300 (74.33%), Postives = 231/300 (77.00%), Query Frame = 0 

Query: 8   ADREGGRPLELVVEKLKADGFVGRHERLRHKFFAPCVYYFFTDPELVQGNVESSTKNDEA 67
           ADREGGRPLELVVEKLKADGFVGRHER+RHKFFAPCVYY F+DPELVQGNVESS      
Sbjct: 267 ADREGGRPLELVVEKLKADGFVGRHERIRHKFFAPCVYYXFSDPELVQGNVESS------ 326

Query: 68  VSSTANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIGQ 127
                       +ISQRRSFLVF+CIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIGQ
Sbjct: 327 ------------KISQRRSFLVFYCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIGQ 386

Query: 128 NLILDSDMYFLRVEARQLICGYFICLSNIVSDEEHKYEEIGPSNWHKACYVPVKSDALVV 187
           NLILDSDMYFLRV                   EEHK EEIGPSNWHKACYVPVKSDALVV
Sbjct: 387 NLILDSDMYFLRV-------------------EEHKLEEIGPSNWHKACYVPVKSDALVV 446

Query: 188 GFRRWLNKY------W----------------------SHVVNCKSCNGAYKALNIAEVS 247
           GFRRWLNKY      W                      SHVVNCKSCNGAYKALNIAEVS
Sbjct: 447 GFRRWLNKYAGGRVDWGGKYSGSLPPLPPREEVFERYRSHVVNCKSCNGAYKALNIAEVS 506

Query: 248 LQAISMAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 280
           LQAIS+AAIGALAL K+GV+SATVRATIVT+AILCFAASKWLSHFIHKTFHFQ YNHALV
Sbjct: 507 LQAISIAAIGALALTKNGVISATVRATIVTIAILCFAASKWLSHFIHKTFHFQDYNHALV 529

[Close]
BLAST of CsGy1G028670 vs. NCBI nr
Match: XP_022961138.1 (protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 419.5 bits (1077), Expect = 9.1e-114
Identity = 211/299 (70.57%), Postives = 229/299 (76.59%), Query Frame = 0 

Query: 9   DREGGRPLELVVEKLKADGFVGRHERLRHKFFAPCVYYFFTDPELVQGNVESSTKNDEAV 68
           DREGGRPL+L+VEKLK DG+VG+ +RLRHKF APCVYYFF+DPEL        +KNDE+V
Sbjct: 275 DREGGRPLDLIVEKLKPDGYVGKLDRLRHKFIAPCVYYFFSDPEL-------ESKNDESV 334

Query: 69  SSTANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIGQN 128
           SSTANVKKPPTE SQRRSFLVFFCIPVSPGKSRLIW+FPRNF KW+N+IVPRW+FHIGQN
Sbjct: 335 SSTANVKKPPTETSQRRSFLVFFCIPVSPGKSRLIWSFPRNFSKWINHIVPRWIFHIGQN 394

Query: 129 LILDSDMYFLRVEARQLICGYFICLSNIVSDEEHKYEEIGPSNWHKACYVPVKSDALVVG 188
           L+LDSDMYFLRV                   EEHK EEIGPSNWHKACYVPVKSDALVVG
Sbjct: 395 LVLDSDMYFLRV-------------------EEHKLEEIGPSNWHKACYVPVKSDALVVG 454

Query: 189 FRRWLNK----------------------------YWSHVVNCKSCNGAYKALNIAEVSL 248
           FRRWLNK                            YWSHVVNC+SCNGAYKAL IAEV L
Sbjct: 455 FRRWLNKYAGGQVDWGGKYSGSLPPLPPREQVFERYWSHVVNCRSCNGAYKALRIAEVGL 514

Query: 249 QAISMAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 280
           Q IS+AAIGA+AL K GV+ A  RA IVT+AILCFAASKWLSHFIHKTFHFQVYNHALV
Sbjct: 515 QVISLAAIGAVALTKQGVICAAARAAIVTIAILCFAASKWLSHFIHKTFHFQVYNHALV 547

[Close]
BLAST of CsGy1G028670 vs. NCBI nr
Match: XP_008451032.1 (PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucumis melo])

HSP 1 Score: 413.7 bits (1062), Expect = 5.0e-112
Identity = 216/299 (72.24%), Postives = 227/299 (75.92%), Query Frame = 0 

Query: 9   DREGGRPLELVVEKLKADGFVGRHERLRHKFFAPCVYYFFTDPELVQGNVESSTKNDEAV 68
           DRE GRPLE+VVEKLKADGFVG+ E LRHKFFAPCVYY+FTDPELVQGNVESS+KND ++
Sbjct: 261 DRERGRPLEMVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESSSKNDGSL 320

Query: 69  SSTANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIGQN 128
           SSTANVKKPPTEIS RR+FL FFCIPVSPGKSRLIWAFP NF KW++ IVPRWMFHI QN
Sbjct: 321 SSTANVKKPPTEIS-RRTFLAFFCIPVSPGKSRLIWAFPNNFDKWVHSIVPRWMFHIVQN 380

Query: 129 LILDSDMYFLRVEARQLICGYFICLSNIVSDEEHKYEEIGPSNWHKACYVPVKSDALVVG 188
           LILDSDMY LRV                   EEHKYEEIG SNWHKACYVPVKSDA VVG
Sbjct: 381 LILDSDMYLLRV-------------------EEHKYEEIGTSNWHKACYVPVKSDAFVVG 440

Query: 189 FRRWLNK----------------------------YWSHVVNCKSCNGAYKALNIAEVSL 248
           FRRWLNK                            YWSHVVNCKSCNGAYKALN AEVSL
Sbjct: 441 FRRWLNKYAGGQVDWGGKYSGSLPPLPPREQVLERYWSHVVNCKSCNGAYKALNKAEVSL 500

Query: 249 QAISMAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 280
           Q IS+AAIGALAL K GV SA VRATI  +AILCFAASKWLSHFIHKTF F  Y HALV
Sbjct: 501 QVISIAAIGALALTKSGVSSAKVRATIFIIAILCFAASKWLSHFIHKTFRFHDYIHALV 539

[Close]
BLAST of CsGy1G028670 vs. TAIR10
Match: AT4G25650.2 (ACD1-like)

HSP 1 Score: 199.1 bits (505), Expect = 3.5e-51
Identity = 119/300 (39.67%), Postives = 145/300 (48.33%), Query Frame = 0 

Query: 9   DREGGRPLELVVEKLKADGFVGRHERLRHKFFAPCVYYFFTDPELVQGNVESSTKNDEAV 68
           DREGG+PLE+ V+KL   GF  + E     F APCVY   TDP           +  E  
Sbjct: 290 DREGGKPLEINVKKLDNKGFFSKQEWGYSNFIAPCVYRSSTDP--------LPEQEHEYP 349

Query: 69  SSTANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIGQN 128
           +  A+ K     +S+RR  L+F CIPVSPG+SRLIW FPRNFG +++ IVPRW+FHIGQN
Sbjct: 350 APAASDK---AALSKRRLSLIFICIPVSPGRSRLIWTFPRNFGVFIDKIVPRWVFHIGQN 409

Query: 129 LILDSDMYFLRVEARQLICGYFICLSNIVSDEEHKYEEIGPSNWHKACYVPVKSDALVVG 188
            ILDSD++ L VE R+++                   E GP NW KAC++P KSDA VV 
Sbjct: 410 TILDSDLHLLHVEERKIL-------------------ERGPENWQKACFIPTKSDANVVT 469

Query: 189 FRRWLNK-----------------------------YWSHVVNCKSCNGAYKALNIAEVS 248
           FRRW NK                             YWSHV NC                
Sbjct: 470 FRRWFNKYSEARVDWRGKFDPFLLPPTPPREQLFDRYWSHVENCSXXXXXXXXXXXXXXX 529

Query: 249 LQAISMAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 280
                                          A+L FAASKWLSHFI+KTFH+  YNHA+V
Sbjct: 530 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAVLSFAASKWLSHFIYKTFHYHDYNHAVV 559

[Close]
BLAST of CsGy1G028670 vs. TAIR10
Match: AT2G24820.1 (translocon at the inner envelope membrane of chloroplasts 55-II)

HSP 1 Score: 45.8 bits (107), Expect = 5.0e-05
Identity = 66/295 (22.37%), Postives = 112/295 (37.97%), Query Frame = 0 

Query: 7   TADREGGRPLELVVEKLKADGFVGRHERLRH--------KFFAPCVYYFFTDPELVQGNV 66
           TA RE  +PL   V +    GF G   R +         +F APCV         +Q N 
Sbjct: 253 TAKREDAQPLVFEVTERSNRGFAGTWGREKEGGKGSNLLRFDAPCV---------LQNNR 312

Query: 67  ESSTKNDEAVSSTANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIV 126
           E   K+         VK   + +        F C P   GKS LI  F       +  ++
Sbjct: 313 EFEGKD--------GVKNYFSGL--------FLCRPTGQGKSMLIVRFGVTKRSPLVSVL 372

Query: 127 PRWMFHIGQNLILDSDMYFL----------RVEARQL----------ICGYFICLSNIVS 186
           P+W +H     + + DM FL          +V  + L          +  Y   +  +  
Sbjct: 373 PQWFWHQNACKVFEQDMGFLSSQNEVLMKEKVPTKDLYLNLKSSDTWVAEYRKWMDKVGH 432

Query: 187 DEEHKY-------EEIGPSNWHK--------ACYVPVKSDALVVGFRRWLNKYWSHVVNC 246
              + +        ++ P   H         +   P K     +      N+Y+ H+++C
Sbjct: 433 GMPYHFGHRTISLPKVPPVVEHAPAGLIAALSASYPAKGGIGTMHAPNLANRYFRHIIHC 492

Query: 247 KSCNGAYKALNIAEVSLQAISMAAIGALALIKHGVLSATVRATIVTVAILCFAAS 259
           +SC+   K+  + +  L A ++ A+ ALA++   V+S   +A ++  A LC AA+
Sbjct: 493 RSCSNVIKSFELWKNILSATAV-ALTALAIL---VVSRQWKAVLLGSAALCSAAA 518

[Close]
BLAST of CsGy1G028670 vs. Swiss-Prot
Match: sp|Q8W496|PTC52_ARATH (Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTC52 PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 6.3e-50
Identity = 119/300 (39.67%), Postives = 145/300 (48.33%), Query Frame = 0 

Query: 9   DREGGRPLELVVEKLKADGFVGRHERLRHKFFAPCVYYFFTDPELVQGNVESSTKNDEAV 68
           DREGG+PLE+ V+KL   GF  + E     F APCVY   TDP           +  E  
Sbjct: 290 DREGGKPLEINVKKLDNKGFFSKQEWGYSNFIAPCVYRSSTDP--------LPEQEHEYP 349

Query: 69  SSTANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIGQN 128
           +  A+ K     +S+RR  L+F CIPVSPG+SRLIW FPRNFG +++ IVPRW+FHIGQN
Sbjct: 350 APAASDK---AALSKRRLSLIFICIPVSPGRSRLIWTFPRNFGVFIDKIVPRWVFHIGQN 409

Query: 129 LILDSDMYFLRVEARQLICGYFICLSNIVSDEEHKYEEIGPSNWHKACYVPVKSDALVVG 188
            ILDSD++ L VE R+++                   E GP NW KAC++P KSDA VV 
Sbjct: 410 TILDSDLHLLHVEERKIL-------------------ERGPENWQKACFIPTKSDANVVT 469

Query: 189 FRRWLNK-----------------------------YWSHVVNCKSCNGAYKALNIAEVS 248
           FRRW NK                             YWSHV NC                
Sbjct: 470 FRRWFNKYSEARVDWRGKFDPFLLPPTPPREQLFDRYWSHVENCSXXXXXXXXXXXXXXX 529

Query: 249 LQAISMAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 280
                                          A+L FAASKWLSHFI+KTFH+  YNHA+V
Sbjct: 530 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAVLSFAASKWLSHFIYKTFHYHDYNHAVV 559

[Close]
BLAST of CsGy1G028670 vs. Swiss-Prot
Match: sp|O49931|TIC55_PEA (Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.6e-06
Identity = 65/273 (23.81%), Postives = 95/273 (34.80%), Query Frame = 0 

Query: 7   TADREGGRPLELVVEKLKADGFVGRHERLRH-------KFFAPCVYYFFTDPELVQGNVE 66
           +A RE  + L   V +    GF G   R +        +F APCV         +Q N E
Sbjct: 268 SAKREDAQALGFEVTERTDRGFAGWWGREKDGSKPNFLRFEAPCV---------LQNNRE 327

Query: 67  SSTKNDEAVSSTANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVP 126
              KN E    +                 +F C P   GKS LI  F       +  + P
Sbjct: 328 IVDKNGEINHFSG----------------LFLCRPTGQGKSMLIVRFGATKRSPLIKLFP 387

Query: 127 RWMFHIGQNLILDSDMYFL----------RVEARQLICG--------------------- 186
            W FH   + + + DM FL          +V  ++L                        
Sbjct: 388 EWYFHQNASKVFEQDMGFLSSQNEILLKEKVPTKELYLNLKSSDTWVAEYRKWMDKVGHG 447

Query: 187 --YFICLSNIVSDEEHKYEEIGPSNW--HKACYVPVKSDALVVGFRRWLNKYWSHVVNCK 238
             Y    S I   EE    E  P+      +   P K     +      N+Y+ HV++CK
Sbjct: 448 MPYHFGHSTISLPEEPAVVEHAPAGLVAGLSASSPAKGGIGTMHAPNLANRYFRHVIHCK 507

[Close]
BLAST of CsGy1G028670 vs. Swiss-Prot
Match: sp|Q9SK50|TIC55_ARATH (Protein TIC 55, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC55 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 9.0e-04
Identity = 66/295 (22.37%), Postives = 112/295 (37.97%), Query Frame = 0 

Query: 7   TADREGGRPLELVVEKLKADGFVGRHERLRH--------KFFAPCVYYFFTDPELVQGNV 66
           TA RE  +PL   V +    GF G   R +         +F APCV         +Q N 
Sbjct: 253 TAKREDAQPLVFEVTERSNRGFAGTWGREKEGGKGSNLLRFDAPCV---------LQNNR 312

Query: 67  ESSTKNDEAVSSTANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIV 126
           E   K+         VK   + +        F C P   GKS LI  F       +  ++
Sbjct: 313 EFEGKD--------GVKNYFSGL--------FLCRPTGQGKSMLIVRFGVTKRSPLVSVL 372

Query: 127 PRWMFHIGQNLILDSDMYFL----------RVEARQL----------ICGYFICLSNIVS 186
           P+W +H     + + DM FL          +V  + L          +  Y   +  +  
Sbjct: 373 PQWFWHQNACKVFEQDMGFLSSQNEVLMKEKVPTKDLYLNLKSSDTWVAEYRKWMDKVGH 432

Query: 187 DEEHKY-------EEIGPSNWHK--------ACYVPVKSDALVVGFRRWLNKYWSHVVNC 246
              + +        ++ P   H         +   P K     +      N+Y+ H+++C
Sbjct: 433 GMPYHFGHRTISLPKVPPVVEHAPAGLIAALSASYPAKGGIGTMHAPNLANRYFRHIIHC 492

Query: 247 KSCNGAYKALNIAEVSLQAISMAAIGALALIKHGVLSATVRATIVTVAILCFAAS 259
           +SC+   K+  + +  L A ++ A+ ALA++   V+S   +A ++  A LC AA+
Sbjct: 493 RSCSNVIKSFELWKNILSATAV-ALTALAIL---VVSRQWKAVLLGSAALCSAAA 518

[Close]
BLAST of CsGy1G028670 vs. TrEMBL
Match: tr|A0A0A0LX74|A0A0A0LX74_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600180 PE=4 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 2.1e-135
Identity = 250/297 (84.18%), Postives = 250/297 (84.18%), Query Frame = 0 

Query: 11  EGGRPLELVVEKLKADGFVGRHERLRHKFFAPCVYYFFTDPELVQGNVESSTKNDEAVSS 70
           EGGRPLELVVEKLKADGFVGRHERLRHKFFAPCVYYFFTDPELVQGNVESSTKNDEAVSS
Sbjct: 277 EGGRPLELVVEKLKADGFVGRHERLRHKFFAPCVYYFFTDPELVQGNVESSTKNDEAVSS 336

Query: 71  TANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIGQNLI 130
           TANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIGQNLI
Sbjct: 337 TANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIGQNLI 396

Query: 131 LDSDMYFLRVEARQLICGYFICLSNIVSDEEHKYEEIGPSNWHKACYVPVKSDALVVGFR 190
           LDSDMYFLRV                   EEHKYEEIGPSNWHKACYVPVKSDALVVGFR
Sbjct: 397 LDSDMYFLRV-------------------EEHKYEEIGPSNWHKACYVPVKSDALVVGFR 456

Query: 191 RWLNK----------------------------YWSHVVNCKSCNGAYKALNIAEVSLQA 250
           RWLNK                            YWSHVVNCKSCNGAYKALNIAEVSLQA
Sbjct: 457 RWLNKYAGGRVDWGGKYSGSLPPIPPREQVFERYWSHVVNCKSCNGAYKALNIAEVSLQA 516

Query: 251 ISMAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 280
           ISMAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV
Sbjct: 517 ISMAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 554

[Close]
BLAST of CsGy1G028670 vs. TrEMBL
Match: tr|A0A1S4DYB5|A0A1S4DYB5_CUCME (LOW QUALITY PROTEIN: protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492541 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 4.9e-116
Identity = 223/300 (74.33%), Postives = 231/300 (77.00%), Query Frame = 0 

Query: 8   ADREGGRPLELVVEKLKADGFVGRHERLRHKFFAPCVYYFFTDPELVQGNVESSTKNDEA 67
           ADREGGRPLELVVEKLKADGFVGRHER+RHKFFAPCVYY F+DPELVQGNVESS      
Sbjct: 267 ADREGGRPLELVVEKLKADGFVGRHERIRHKFFAPCVYYXFSDPELVQGNVESS------ 326

Query: 68  VSSTANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIGQ 127
                       +ISQRRSFLVF+CIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIGQ
Sbjct: 327 ------------KISQRRSFLVFYCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIGQ 386

Query: 128 NLILDSDMYFLRVEARQLICGYFICLSNIVSDEEHKYEEIGPSNWHKACYVPVKSDALVV 187
           NLILDSDMYFLRV                   EEHK EEIGPSNWHKACYVPVKSDALVV
Sbjct: 387 NLILDSDMYFLRV-------------------EEHKLEEIGPSNWHKACYVPVKSDALVV 446

Query: 188 GFRRWLNKY------W----------------------SHVVNCKSCNGAYKALNIAEVS 247
           GFRRWLNKY      W                      SHVVNCKSCNGAYKALNIAEVS
Sbjct: 447 GFRRWLNKYAGGRVDWGGKYSGSLPPLPPREEVFERYRSHVVNCKSCNGAYKALNIAEVS 506

Query: 248 LQAISMAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 280
           LQAIS+AAIGALAL K+GV+SATVRATIVT+AILCFAASKWLSHFIHKTFHFQ YNHALV
Sbjct: 507 LQAISIAAIGALALTKNGVISATVRATIVTIAILCFAASKWLSHFIHKTFHFQDYNHALV 529

[Close]
BLAST of CsGy1G028670 vs. TrEMBL
Match: tr|A0A1S3BRB5|A0A1S3BRB5_CUCME (protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492438 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 3.3e-112
Identity = 216/299 (72.24%), Postives = 227/299 (75.92%), Query Frame = 0 

Query: 9   DREGGRPLELVVEKLKADGFVGRHERLRHKFFAPCVYYFFTDPELVQGNVESSTKNDEAV 68
           DRE GRPLE+VVEKLKADGFVG+ E LRHKFFAPCVYY+FTDPELVQGNVESS+KND ++
Sbjct: 261 DRERGRPLEMVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESSSKNDGSL 320

Query: 69  SSTANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIGQN 128
           SSTANVKKPPTEIS RR+FL FFCIPVSPGKSRLIWAFP NF KW++ IVPRWMFHI QN
Sbjct: 321 SSTANVKKPPTEIS-RRTFLAFFCIPVSPGKSRLIWAFPNNFDKWVHSIVPRWMFHIVQN 380

Query: 129 LILDSDMYFLRVEARQLICGYFICLSNIVSDEEHKYEEIGPSNWHKACYVPVKSDALVVG 188
           LILDSDMY LRV                   EEHKYEEIG SNWHKACYVPVKSDA VVG
Sbjct: 381 LILDSDMYLLRV-------------------EEHKYEEIGTSNWHKACYVPVKSDAFVVG 440

Query: 189 FRRWLNK----------------------------YWSHVVNCKSCNGAYKALNIAEVSL 248
           FRRWLNK                            YWSHVVNCKSCNGAYKALN AEVSL
Sbjct: 441 FRRWLNKYAGGQVDWGGKYSGSLPPLPPREQVLERYWSHVVNCKSCNGAYKALNKAEVSL 500

Query: 249 QAISMAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 280
           Q IS+AAIGALAL K GV SA VRATI  +AILCFAASKWLSHFIHKTF F  Y HALV
Sbjct: 501 QVISIAAIGALALTKSGVSSAKVRATIFIIAILCFAASKWLSHFIHKTFRFHDYIHALV 539

[Close]
BLAST of CsGy1G028670 vs. TrEMBL
Match: tr|A0A0A0LZS1|A0A0A0LZS1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600170 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 1.8e-102
Identity = 200/290 (68.97%), Postives = 217/290 (74.83%), Query Frame = 0 

Query: 18  LVVEKLKADGFVGRHERLRHKFFAPCVYYFFTDPELVQGNVESSTKNDEAVSSTANVKKP 77
           +VVEKLKADGFVG+ E LRHKFFAPCVYY+FTDPELVQGNVES  K D +VSSTANVKKP
Sbjct: 1   MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVES--KKDGSVSSTANVKKP 60

Query: 78  PTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIGQNLILDSDMYF 137
           PTEIS RR+FL FFCIPVSPGKSRLIWAFP N  KW+++IVPRW+FHI QNLILDSDMY 
Sbjct: 61  PTEIS-RRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYL 120

Query: 138 LRVEARQLICGYFICLSNIVSDEEHKYEEIGPSNWHKACYVPVKSDALVVGFRRWLNK-- 197
           L V                   EEHKYEEIGPSNWHKACYVPVKSDA VVGFRRWLNK  
Sbjct: 121 LHV-------------------EEHKYEEIGPSNWHKACYVPVKSDAFVVGFRRWLNKYA 180

Query: 198 --------------------------YWSHVVNCKSCNGAYKALNIAEVSLQAISMAAIG 257
                                     YWSHVVNCKSCNGAYKALN AEVSLQ IS+AAIG
Sbjct: 181 GGQVDWGGKYSGSLPSLSPRALVLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIG 240

Query: 258 ALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 280
            LAL ++GV+SA VRATI  +AI+CFAASKWLSHFI +TF F+ Y HALV
Sbjct: 241 VLALTQNGVISAKVRATIFIIAIVCFAASKWLSHFIQETFRFRDYIHALV 268

[Close]
BLAST of CsGy1G028670 vs. TrEMBL
Match: tr|A0A2R6QTQ2|A0A2R6QTQ2_ACTCH (Protochlorophyllide-dependent translocon component 52 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc15069 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.6e-77
Identity = 148/303 (48.84%), Postives = 192/303 (63.37%), Query Frame = 0 

Query: 3   SFTATADREGGRPLELVVEKLKADGFVGRHERLRHKFFAPCVYYFFTDPELVQGNVESST 62
           SFT  ADREGGRPLE+ ++KL  +G++ + E     F APC++  FT          ++ 
Sbjct: 269 SFTVKADREGGRPLEMSIKKLDVNGYIAKQEWADSSFIAPCIFSAFTS--------VAAD 328

Query: 63  KNDEAVSSTANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWM 122
            ++E+VSS    ++P ++  Q+R  L+F C+PVSPG SRLIWAFPRNFG W++ IVPRWM
Sbjct: 329 PSNESVSSAGTKEEPSSQKPQKRVALIFICVPVSPGNSRLIWAFPRNFGLWIDRIVPRWM 388

Query: 123 FHIGQNLILDSDMYFLRVEARQLICGYFICLSNIVSDEEHKYEEIGPSNWHKACYVPVKS 182
           FH+GQNLILDSD+Y L +E R+++                   +IGPSNW KAC+VP KS
Sbjct: 389 FHVGQNLILDSDLYLLHLEERKIM-------------------DIGPSNWKKACFVPTKS 448

Query: 183 DALVVGFRRWLN----------------------------KYWSHVVNCKSCNGAYKALN 242
           DALVVGFRRWLN                            +YWSHVVNC SC  AYK LN
Sbjct: 449 DALVVGFRRWLNNYAGGQVDWRTKFSGALPPTPPREQLLDRYWSHVVNCSSCRVAYKGLN 508

Query: 243 IAEVSLQAISMAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVY 278
           + EV LQ IS+A IG +A  K G+LSA+ R T+V+VA+LCF  S+WLSHF++K FH+  Y
Sbjct: 509 VLEVVLQVISIALIGIVAAAKQGILSASARTTLVSVALLCFVGSRWLSHFVYKNFHYHDY 544

The following BLAST results are available for this feature:
BLAST of CsGy1G028670 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011660064.15.3e-13884.44PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic ... [more]
KGN66378.13.2e-13584.18hypothetical protein Csa_1G600180 [Cucumis sativus][more]
XP_016900972.17.5e-11674.33PREDICTED: LOW QUALITY PROTEIN: protochlorophyllide-dependent translocon compone... [more]
XP_022961138.19.1e-11470.57protochlorophyllide-dependent translocon component 52, chloroplastic-like isofor... [more]
XP_008451032.15.0e-11272.24PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-... [more]
BLAST of CsGy1G028670 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G25650.23.5e-5139.67ACD1-like[more]
AT2G24820.15.0e-0522.37translocon at the inner envelope membrane of chloroplasts 55-II[more]
BLAST of CsGy1G028670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8W496|PTC52_ARATH6.3e-5039.67Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidop... [more]
sp|O49931|TIC55_PEA5.6e-0623.81Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1[more]
sp|Q9SK50|TIC55_ARATH9.0e-0422.37Protein TIC 55, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC55 PE=1 SV=1[more]
BLAST of CsGy1G028670 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LX74|A0A0A0LX74_CUCSA2.1e-13584.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600180 PE=4 SV=1[more]
tr|A0A1S4DYB5|A0A1S4DYB5_CUCME4.9e-11674.33LOW QUALITY PROTEIN: protochlorophyllide-dependent translocon component 52, chlo... [more]
tr|A0A1S3BRB5|A0A1S3BRB5_CUCME3.3e-11272.24protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cuc... [more]
tr|A0A0A0LZS1|A0A0A0LZS1_CUCSA1.8e-10268.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600170 PE=4 SV=1[more]
tr|A0A2R6QTQ2|A0A2R6QTQ2_ACTCH2.6e-7748.84Protochlorophyllide-dependent translocon component 52 like OS=Actinidia chinensi... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0010277chlorophyllide a oxygenase [overall] activity
Vocabulary: INTERPRO
TermDefinition
IPR013626PaO
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0010277 chlorophyllide a oxygenase [overall] activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G028670.1CsGy1G028670.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013626Pheophorbide a oxygenasePFAMPF08417PaOcoord: 39..145
e-value: 4.7E-25
score: 87.5
NoneNo IPR availablePANTHERPTHR21266:SF38SUBFAMILY NOT NAMEDcoord: 193..278
NoneNo IPR availablePANTHERPTHR21266IRON-SULFUR DOMAIN CONTAINING PROTEINcoord: 193..278
coord: 157..196
NoneNo IPR availablePANTHERPTHR21266IRON-SULFUR DOMAIN CONTAINING PROTEINcoord: 5..145
NoneNo IPR availablePANTHERPTHR21266:SF38SUBFAMILY NOT NAMEDcoord: 157..196
coord: 5..145
NoneNo IPR availableSUPERFAMILYSSF55961Bet v1-likecoord: 83..200