CsGy1G028580 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G028580
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 26737744 .. 26738106 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGTGAATCGAACGACAAGAAACAATCTCGAAAGTACTTTAAACCTGGTGAGTTAGCACAAATTCGAGACTCACAAATCAATGCAAAACGAAACCGAGTCAAATCAATTTCGAAGATTTGCCTCCACCCTATTGTGGAATCGCCTTCGATTTTTGATATCTCCAATCAACTAGAGTTTAGGATGGCGAAAGTTTGTCCTAATGGTGCTTCGTTTTTCCCTAATAGGAAGAAGATCGCCGCGATTAAGCCAGACAATTTGTTTTCAAACCCTAATTTAGAGAGTCCGATTATCGAGTTGACTAGTGACCAGTTGATTATTGGTTCAGTTGATAGTCCTTCGGAAGGACTTGAAATTTGA

mRNA sequence

ATGAAGAGTGAATCGAACGACAAGAAACAATCTCGAAAGTACTTTAAACCTGGTGAGTTAGCACAAATTCGAGACTCACAAATCAATGCAAAACGAAACCGAGTCAAATCAATTTCGAAGATTTGCCTCCACCCTATTGTGGAATCGCCTTCGATTTTTGATATCTCCAATCAACTAGAGTTTAGGATGGCGAAAGTTTGTCCTAATGGTGCTTCGTTTTTCCCTAATAGGAAGAAGATCGCCGCGATTAAGCCAGACAATTTGTTTTCAAACCCTAATTTAGAGAGTCCGATTATCGAGTTGACTAGTGACCAGTTGATTATTGGTTCAGTTGATAGTCCTTCGGAAGGACTTGAAATTTGA

Coding sequence (CDS)

ATGAAGAGTGAATCGAACGACAAGAAACAATCTCGAAAGTACTTTAAACCTGGTGAGTTAGCACAAATTCGAGACTCACAAATCAATGCAAAACGAAACCGAGTCAAATCAATTTCGAAGATTTGCCTCCACCCTATTGTGGAATCGCCTTCGATTTTTGATATCTCCAATCAACTAGAGTTTAGGATGGCGAAAGTTTGTCCTAATGGTGCTTCGTTTTTCCCTAATAGGAAGAAGATCGCCGCGATTAAGCCAGACAATTTGTTTTCAAACCCTAATTTAGAGAGTCCGATTATCGAGTTGACTAGTGACCAGTTGATTATTGGTTCAGTTGATAGTCCTTCGGAAGGACTTGAAATTTGA

Protein sequence

MKSESNDKKQSRKYFKPGELAQIRDSQINAKRNRVKSISKICLHPIVESPSIFDISNQLEFRMAKVCPNGASFFPNRKKIAAIKPDNLFSNPNLESPIIELTSDQLIIGSVDSPSEGLEI
Homology
[Close]
BLAST of CsGy1G028580 vs. NCBI nr
Match: KGN66369.1 (hypothetical protein Csa_1G600090 [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 8.0e-59
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MKSESNDKKQSRKYFKPGELAQIRDSQINAKRNRVKSISKICLHPIVESPSIFDISNQLE 60
           MKSESNDKKQSRKYFKPGELAQIRDSQINAKRNRVKSISKICLHPIVESPSIFDISNQLE
Sbjct: 1   MKSESNDKKQSRKYFKPGELAQIRDSQINAKRNRVKSISKICLHPIVESPSIFDISNQLE 60

Query: 61  FRMAKVCPNGASFFPNRKKIAAIKPDNLFSNPNLESPIIELTSDQLIIGSVDSPSEGLEI 120
           FRMAKVCPNGASFFPNRKKIAAIKPDNLFSNPNLESPIIELTSDQLIIGSVDSPSEGLEI
Sbjct: 61  FRMAKVCPNGASFFPNRKKIAAIKPDNLFSNPNLESPIIELTSDQLIIGSVDSPSEGLEI 120

[Close]
BLAST of CsGy1G028580 vs. NCBI nr
Match: KGN66347.1 (hypothetical protein Csa_1G599410 [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 7.3e-28
Identity = 73/102 (71.57%), Postives = 76/102 (74.51%), Query Frame = 0 

Query: 1   MKSESNDKKQSRKYFKPGELAQIRDSQINAKRNRVKSISKICLHPIVESPSIFDISNQLE 60
           MK E N KKQSRKYFK  ELA IRDSQIN KRN          HPI+ESP IFDIS+QLE
Sbjct: 1   MKGEPNGKKQSRKYFKSNELAHIRDSQINVKRN----------HPIMESPPIFDISDQLE 60

Query: 61  FRMAKVCPNGASFFPNRKKIAAIKPDNLFSNPNLESPIIELT 103
           FRM KV  NGASFF N+KKI AIKP NLF NPNLESPI ELT
Sbjct: 61  FRMVKVYRNGASFFLNKKKIVAIKPVNLFLNPNLESPITELT 92

[Close]
BLAST of CsGy1G028580 vs. TrEMBL
Match: tr|A0A0A0LZ95|A0A0A0LZ95_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600090 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.3e-59
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MKSESNDKKQSRKYFKPGELAQIRDSQINAKRNRVKSISKICLHPIVESPSIFDISNQLE 60
           MKSESNDKKQSRKYFKPGELAQIRDSQINAKRNRVKSISKICLHPIVESPSIFDISNQLE
Sbjct: 1   MKSESNDKKQSRKYFKPGELAQIRDSQINAKRNRVKSISKICLHPIVESPSIFDISNQLE 60

Query: 61  FRMAKVCPNGASFFPNRKKIAAIKPDNLFSNPNLESPIIELTSDQLIIGSVDSPSEGLEI 120
           FRMAKVCPNGASFFPNRKKIAAIKPDNLFSNPNLESPIIELTSDQLIIGSVDSPSEGLEI
Sbjct: 61  FRMAKVCPNGASFFPNRKKIAAIKPDNLFSNPNLESPIIELTSDQLIIGSVDSPSEGLEI 120

[Close]
BLAST of CsGy1G028580 vs. TrEMBL
Match: tr|A0A0A0LZP6|A0A0A0LZP6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599410 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.9e-28
Identity = 73/102 (71.57%), Postives = 76/102 (74.51%), Query Frame = 0 

Query: 1   MKSESNDKKQSRKYFKPGELAQIRDSQINAKRNRVKSISKICLHPIVESPSIFDISNQLE 60
           MK E N KKQSRKYFK  ELA IRDSQIN KRN          HPI+ESP IFDIS+QLE
Sbjct: 1   MKGEPNGKKQSRKYFKSNELAHIRDSQINVKRN----------HPIMESPPIFDISDQLE 60

Query: 61  FRMAKVCPNGASFFPNRKKIAAIKPDNLFSNPNLESPIIELT 103
           FRM KV  NGASFF N+KKI AIKP NLF NPNLESPI ELT
Sbjct: 61  FRMVKVYRNGASFFLNKKKIVAIKPVNLFLNPNLESPITELT 92

The following BLAST results are available for this feature:
BLAST of CsGy1G028580 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66369.18.0e-59100.00hypothetical protein Csa_1G600090 [Cucumis sativus][more]
KGN66347.17.3e-2871.57hypothetical protein Csa_1G599410 [Cucumis sativus][more]
BLAST of CsGy1G028580 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G028580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G028580 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LZ95|A0A0A0LZ95_CUCSA5.3e-59100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600090 PE=4 SV=1[more]
tr|A0A0A0LZP6|A0A0A0LZP6_CUCSA4.9e-2871.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599410 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G028580.1CsGy1G028580.1mRNA