CsGy1G026820 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G026820
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 25323780 .. 25324316 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTGATATCAAGGAAAGCCCAAACGATGCTGGTACTGGACCAGGCAGTCCATCTCTAAAATTGATCTATAAAGATTTCATATTTCCTTCGGTGCCATTATTGAAAGTTTCAATTAAATCTTTCTCCTATGTAAATATTTTCAAAATTATTCTTCCTTAATTCATGGTTAAAAAGAAGAAAATGGACGTTCATGTGACCTCAATCATAAAATTATAATTTGTAATAACAAAAATCATCAGCAACACCAAGAGAGAGGTGAAAATAATTTTAAAATTCTAAGAACAATTTTATTTTATGGAGATCGTCATTTGTTTTATAAATGGAGGAACTCTAACGTTCCAAATCCCAAAGAAACTTAGAGATATCAATTCATGTCGAAGTGGGGCTAAAACCCTCACAACAAATATTCGTGTTGAACCACTTTATCTAAATTAGCCTCGATCTAGACCTCTAAGGACGAGATGGGCACATTTGATTGTTCTCAAAGTTGAGGTGAGCATACCGAGTTGCTTACCTCAACCTCTAGGCTTGAAGTGA

mRNA sequence

TCTGATATCAAGGAAAGCCCAAACGATGCTGGTACTGGACCAGGCAGTCCATCTCTAAAATTGATCTATAAAGATTTCATATTTCCTTCGGTGCCATTATTGAAAGTTTCAATTAAATCTTTCTCCTATCCTCGATCTAGACCTCTAAGGACGAGATGGGCACATTTGATTGTTCTCAAAGTTGAGGTGAGCATACCGAGTTGCTTACCTCAACCTCTAGGCTTGAAGTGA

Coding sequence (CDS)

TCTGATATCAAGGAAAGCCCAAACGATGCTGGTACTGGACCAGGCAGTCCATCTCTAAAATTGATCTATAAAGATTTCATATTTCCTTCGGTGCCATTATTGAAAGTTTCAATTAAATCTTTCTCCTATCCTCGATCTAGACCTCTAAGGACGAGATGGGCACATTTGATTGTTCTCAAAGTTGAGGTGAGCATACCGAGTTGCTTACCTCAACCTCTAGGCTTGAAGTGA

Protein sequence

SDIKESPNDAGTGPGSPSLKLIYKDFIFPSVPLLKVSIKSFSYPRSRPLRTRWAHLIVLKVEVSIPSCLPQPLGLK
Homology
[Close]
BLAST of CsGy1G026820 vs. NCBI nr
Match: KGN66183.1 (hypothetical protein Csa_1G574990 [Cucumis sativus])

HSP 1 Score: 80.1 bits (196), Expect = 3.6e-12
Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 0 

Query: 1  SDIKESPNDAGTGPGSPSLKLIYKDFIFPSVPLLKVSIKSFS 43
          SDIKESPNDAGTGPGSPSLKLIYKDFIFPSVPLLKVSI + S
Sbjct: 17 SDIKESPNDAGTGPGSPSLKLIYKDFIFPSVPLLKVSILNLS 58

[Close]
BLAST of CsGy1G026820 vs. TrEMBL
Match: tr|A0A0A0LWP1|A0A0A0LWP1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G574990 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.4e-12
Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 0 

Query: 1  SDIKESPNDAGTGPGSPSLKLIYKDFIFPSVPLLKVSIKSFS 43
          SDIKESPNDAGTGPGSPSLKLIYKDFIFPSVPLLKVSI + S
Sbjct: 17 SDIKESPNDAGTGPGSPSLKLIYKDFIFPSVPLLKVSILNLS 58

The following BLAST results are available for this feature:
BLAST of CsGy1G026820 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66183.13.6e-1292.86hypothetical protein Csa_1G574990 [Cucumis sativus][more]
BLAST of CsGy1G026820 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G026820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G026820 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LWP1|A0A0A0LWP1_CUCSA2.4e-1292.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G574990 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G026820.1CsGy1G026820.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G026820Csa1G574990Cucumber (Chinese Long) v2cgybcuB002
CsGy1G026820CsaV3_1G039860Cucumber (Chinese Long) v3cgybcucB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G026820Cucumber (Gy14) v2cgybcgybB011
CsGy1G026820Cucumber (Gy14) v2cgybcgybB019
CsGy1G026820Cucurbita maxima (Rimu)cgybcmaB005
CsGy1G026820Cucurbita maxima (Rimu)cgybcmaB027
CsGy1G026820Cucurbita maxima (Rimu)cgybcmaB055
CsGy1G026820Cucurbita maxima (Rimu)cgybcmaB112
CsGy1G026820Cucurbita maxima (Rimu)cgybcmaB134
CsGy1G026820Cucurbita moschata (Rifu)cgybcmoB006
CsGy1G026820Cucurbita moschata (Rifu)cgybcmoB027
CsGy1G026820Cucurbita moschata (Rifu)cgybcmoB050
CsGy1G026820Cucurbita moschata (Rifu)cgybcmoB051
CsGy1G026820Cucurbita moschata (Rifu)cgybcmoB105
CsGy1G026820Cucurbita moschata (Rifu)cgybcmoB127
CsGy1G026820Cucurbita pepo (Zucchini)cgybcpeB026
CsGy1G026820Cucurbita pepo (Zucchini)cgybcpeB054
CsGy1G026820Cucurbita pepo (Zucchini)cgybcpeB094
CsGy1G026820Cucurbita pepo (Zucchini)cgybcpeB125
CsGy1G026820Cucurbita pepo (Zucchini)cgybcpeB144
CsGy1G026820Cucumber (Chinese Long) v2cgybcuB019
CsGy1G026820Cucumber (Chinese Long) v2cgybcuB024
CsGy1G026820Bottle gourd (USVL1VR-Ls)cgyblsiB010
CsGy1G026820Bottle gourd (USVL1VR-Ls)cgyblsiB055
CsGy1G026820Bottle gourd (USVL1VR-Ls)cgyblsiB078
CsGy1G026820Melon (DHL92) v3.5.1cgybmeB038
CsGy1G026820Melon (DHL92) v3.5.1cgybmeB060
CsGy1G026820Melon (DHL92) v3.5.1cgybmeB063
CsGy1G026820Melon (DHL92) v3.6.1cgybmedB032
CsGy1G026820Melon (DHL92) v3.6.1cgybmedB054
CsGy1G026820Melon (DHL92) v3.6.1cgybmedB058
CsGy1G026820Watermelon (Charleston Gray)cgybwcgB008
CsGy1G026820Watermelon (Charleston Gray)cgybwcgB030
CsGy1G026820Watermelon (Charleston Gray)cgybwcgB043
CsGy1G026820Watermelon (Charleston Gray)cgybwcgB083
CsGy1G026820Watermelon (97103) v1cgybwmB022
CsGy1G026820Watermelon (97103) v1cgybwmB033
CsGy1G026820Watermelon (97103) v1cgybwmB070
CsGy1G026820Watermelon (97103) v1cgybwmB074
CsGy1G026820Wild cucumber (PI 183967)cgybcpiB002
CsGy1G026820Wild cucumber (PI 183967)cgybcpiB023
CsGy1G026820Wild cucumber (PI 183967)cgybcpiB017
CsGy1G026820Silver-seed gourdcarcgybB0033
CsGy1G026820Silver-seed gourdcarcgybB0101
CsGy1G026820Silver-seed gourdcarcgybB0572
CsGy1G026820Silver-seed gourdcarcgybB0881
CsGy1G026820Cucumber (Chinese Long) v3cgybcucB020
CsGy1G026820Cucumber (Chinese Long) v3cgybcucB029
CsGy1G026820Watermelon (97103) v2cgybwmbB022
CsGy1G026820Watermelon (97103) v2cgybwmbB041
CsGy1G026820Watermelon (97103) v2cgybwmbB082
CsGy1G026820Wax gourdcgybwgoB005
CsGy1G026820Wax gourdcgybwgoB012
CsGy1G026820Wax gourdcgybwgoB091