CsGy1G026560 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G026560
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 25080571 .. 25080856 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACCCGAAAGGTTGGGGGGAAGATTATTGAGCAAGTCCCACATCGGAGGAACAAACAGAAGGAACATCACAGAGCGTTATAAATACAAGACAATGGCAACCTTTCCAACATACTTACCTGGACGGGGTCAATGGGCGATCAGTAAGGTCTATGGCCTAGGTTGGTGACCTCCATTGCACATATCGGAGGGGTGCCCGCCTAAGGTCTGCCCAAAGTGGCAGAGCCTACGTCATAATTTGTGGTAGTGGGGGCCTGCGTTCGCGCGGCCCCTACCCATTTCTC

mRNA sequence

ATGAAACCCGAAAGGTTGGGGGGAAGATTATTGAGCAAGTCCCACATCGGAGGAACAAACAGAAGGAACATCACAGAGCGTTATAAATACAAGACAATGGCAACCTTTCCAACATACTTACCTGGACGGGGTCAATGGGCGATCAGTAAGGTTGGTGACCTCCATTGCACATATCGGAGGGGTGCCCGCCTAAGGTCTGCCCAAAGTGGCAGAGCCTACGTCATAATTTGTGGTAGTGGGGGCCTGCGTTCGCGCGGCCCCTACCCATTTCTC

Coding sequence (CDS)

ATGAAACCCGAAAGGTTGGGGGGAAGATTATTGAGCAAGTCCCACATCGGAGGAACAAACAGAAGGAACATCACAGAGCGTTATAAATACAAGACAATGGCAACCTTTCCAACATACTTACCTGGACGGGGTCAATGGGCGATCAGTAAGGTTGGTGACCTCCATTGCACATATCGGAGGGGTGCCCGCCTAAGGTCTGCCCAAAGTGGCAGAGCCTACGTCATAATTTGTGGTAGTGGGGGCCTGCGTTCGCGCGGCCCCTACCCATTTCTC

Protein sequence

MKPERLGGRLLSKSHIGGTNRRNITERYKYKTMATFPTYLPGRGQWAISKVGDLHCTYRRGARLRSAQSGRAYVIICGSGGLRSRGPYPFL
Homology
[Close]
BLAST of CsGy1G026560 vs. NCBI nr
Match: OWM81313.1 (hypothetical protein CDL15_Pgr007351 [Punica granatum])

HSP 1 Score: 62.8 bits (151), Expect = 7.1e-07
Identity = 30/45 (66.67%), Postives = 36/45 (80.00%), Query Frame = 0 

Query: 44 GQWAISKVGDLHCTYRRGARLRSAQSGRAYVIICGSGGLRSRGPY 89
          G WA  ++GDLHCT+ +G + +   SGRAYVIICGSGGLRSRGPY
Sbjct: 6  GSWA--RLGDLHCTW-KGCQPKVGPSGRAYVIICGSGGLRSRGPY 47

[Close]
BLAST of CsGy1G026560 vs. NCBI nr
Match: OAY51346.1 (hypothetical protein MANES_05G207400 [Manihot esculenta])

HSP 1 Score: 56.6 bits (135), Expect = 5.1e-05
Identity = 27/32 (84.38%), Postives = 27/32 (84.38%), Query Frame = 0 

Query: 59 RRGARLRSAQSGRAYVIICGSGGLRSRGPYPF 91
          RRGA LRS Q GRAYVIICG GGLRSRGPY F
Sbjct: 18 RRGAGLRSPQVGRAYVIICGRGGLRSRGPYQF 49

[Close]
BLAST of CsGy1G026560 vs. NCBI nr
Match: OAY38419.1 (hypothetical protein MANES_10G013100 [Manihot esculenta])

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-04
Identity = 26/31 (83.87%), Postives = 26/31 (83.87%), Query Frame = 0 

Query: 60 RGARLRSAQSGRAYVIICGSGGLRSRGPYPF 91
          RGA LRS Q GRAYVIICG GGLRSRGPY F
Sbjct: 19 RGAGLRSPQDGRAYVIICGRGGLRSRGPYQF 49

[Close]
BLAST of CsGy1G026560 vs. NCBI nr
Match: OAY46254.1 (hypothetical protein MANES_07G129500 [Manihot esculenta])

HSP 1 Score: 55.1 bits (131), Expect = 1.5e-04
Identity = 27/33 (81.82%), Postives = 27/33 (81.82%), Query Frame = 0 

Query: 59 RRGARLRSAQSGRAYVIICGSGGLRSRGPYPFL 92
          RRGA LRS Q GRAYVIICG GGLRSRGPY  L
Sbjct: 18 RRGAGLRSPQVGRAYVIICGRGGLRSRGPYQSL 50

[Close]
BLAST of CsGy1G026560 vs. NCBI nr
Match: OAY45946.1 (hypothetical protein MANES_07G105300 [Manihot esculenta])

HSP 1 Score: 53.9 bits (128), Expect = 3.3e-04
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0 

Query: 59 RRGARLRSAQSGRAYVIICGSGGLRSRGPY 89
          RRGA LRS Q GRAYV+ICG GGLRSRGPY
Sbjct: 18 RRGAGLRSPQVGRAYVVICGRGGLRSRGPY 47

[Close]
BLAST of CsGy1G026560 vs. TrEMBL
Match: tr|A0A218X8Q5|A0A218X8Q5_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr007351 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.7e-07
Identity = 30/45 (66.67%), Postives = 36/45 (80.00%), Query Frame = 0 

Query: 44 GQWAISKVGDLHCTYRRGARLRSAQSGRAYVIICGSGGLRSRGPY 89
          G WA  ++GDLHCT+ +G + +   SGRAYVIICGSGGLRSRGPY
Sbjct: 6  GSWA--RLGDLHCTW-KGCQPKVGPSGRAYVIICGSGGLRSRGPY 47

[Close]
BLAST of CsGy1G026560 vs. TrEMBL
Match: tr|A0A2C9VZL6|A0A2C9VZL6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G207400 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.4e-05
Identity = 27/32 (84.38%), Postives = 27/32 (84.38%), Query Frame = 0 

Query: 59 RRGARLRSAQSGRAYVIICGSGGLRSRGPYPF 91
          RRGA LRS Q GRAYVIICG GGLRSRGPY F
Sbjct: 18 RRGAGLRSPQVGRAYVIICGRGGLRSRGPYQF 49

[Close]
BLAST of CsGy1G026560 vs. TrEMBL
Match: tr|A0A2C9V4B8|A0A2C9V4B8_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G013100 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.5e-05
Identity = 26/31 (83.87%), Postives = 26/31 (83.87%), Query Frame = 0 

Query: 60 RGARLRSAQSGRAYVIICGSGGLRSRGPYPF 91
          RGA LRS Q GRAYVIICG GGLRSRGPY F
Sbjct: 19 RGAGLRSPQDGRAYVIICGRGGLRSRGPYQF 49

[Close]
BLAST of CsGy1G026560 vs. TrEMBL
Match: tr|A0A2C9VL24|A0A2C9VL24_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G129500 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.8e-05
Identity = 27/33 (81.82%), Postives = 27/33 (81.82%), Query Frame = 0 

Query: 59 RRGARLRSAQSGRAYVIICGSGGLRSRGPYPFL 92
          RRGA LRS Q GRAYVIICG GGLRSRGPY  L
Sbjct: 18 RRGAGLRSPQVGRAYVIICGRGGLRSRGPYQSL 50

[Close]
BLAST of CsGy1G026560 vs. TrEMBL
Match: tr|A0A2P2KC36|A0A2P2KC36_RHIMU (Uncharacterized protein MANES_02G087200 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.7e-04
Identity = 27/32 (84.38%), Postives = 27/32 (84.38%), Query Frame = 0 

Query: 59 RRGARLRSAQSGRAYVIICGSGGLRSRGPYPF 91
          RRGA LRS QS RAYVIICGSGGLRSRGP  F
Sbjct: 18 RRGASLRSPQSRRAYVIICGSGGLRSRGPCHF 49

The following BLAST results are available for this feature:
BLAST of CsGy1G026560 vs. NCBI nr
Match NameE-valueIdentityDescription
OWM81313.17.1e-0766.67hypothetical protein CDL15_Pgr007351 [Punica granatum][more]
OAY51346.15.1e-0584.38hypothetical protein MANES_05G207400 [Manihot esculenta][more]
OAY38419.11.1e-0483.87hypothetical protein MANES_10G013100 [Manihot esculenta][more]
OAY46254.11.5e-0481.82hypothetical protein MANES_07G129500 [Manihot esculenta][more]
OAY45946.13.3e-0483.33hypothetical protein MANES_07G105300 [Manihot esculenta][more]
BLAST of CsGy1G026560 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G026560 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G026560 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A218X8Q5|A0A218X8Q5_PUNGR4.7e-0766.67Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr007351 PE=4 SV=1[more]
tr|A0A2C9VZL6|A0A2C9VZL6_MANES3.4e-0584.38Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G207400 PE=4 SV=... [more]
tr|A0A2C9V4B8|A0A2C9V4B8_MANES7.5e-0583.87Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G013100 PE=4 SV=... [more]
tr|A0A2C9VL24|A0A2C9VL24_MANES9.8e-0581.82Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G129500 PE=4 SV=... [more]
tr|A0A2P2KC36|A0A2P2KC36_RHIMU1.7e-0484.38Uncharacterized protein MANES_02G087200 OS=Rhizophora mucronata OX=61149 PE=4 SV... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G026560.1CsGy1G026560.1mRNA