CsGy1G026400 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCAAACTACACGGACCAACACATTAATTTCACTATTGAAGTATTAACACATGGAGTCCTCTATATAAATTTCCAAAAGCCCTAAGCTTTCTTCATTTCTAGACTCTTCCTTCCATTCAATCTCACCTCTGCCTTCTCTTTCTTCTGTCCAAGGGGTGTTCTGAGGTCAGCTCTCTCTTTCCCATCATTTTTTTTGCCTTTCATATCCCTTGTTTTTCTTCAATTTGATCTGGGTTTAGCTGTTTTAGCTCCTTCTAATTAATTATGTTTTTCTCGAAATTTTACATGTATTCAGCTTAAATTATTGGTTACATGCTTCCCGATGATGTGATTCCGCCTTCTATTAGTGGGATTTTGTACTGTTAATTGCGCATCATGACTGTGTTGGTTGTTTTTGTTCATTATTCCATGTCGTTGACTGATTTTAGATTGTATTGAACTTGTGGGTACTCTTAATAATCGGTCTAATTTTATACCCACCTTACAGAATTTTGAGCTTGGTCTTGTTTTTTCGTTTTTTTCTTTGAAGTGATGTGCTTTTTTTGTTGAGCTTGTTTTCTTGTGTGTTCTCTTGTATATATTCTTTCATTTCTGTCAATGAAAGAGGGTTTTTTTTTGTAAAAATACATTGCTCGACTAATTATTTTGGTCCTTTCTGCACATGAGTTGAAGTTATGAATTGCCAAAATGATGTTTCGTGTGAAGGATATCGTAATTGGGTGGTGTCGTATTCTTAATTCATTGGTTTCTTTTGTTGATCTCATGTTTTTGTTGGTTTTATTCTAATTATGTTGAAGTGTGTTAGATCACAGGAAAGATGGTGAAGGCTGTGGCTGTTCTTGGAAGTAGTGAGGGTGTTAGTGGAACTATCTTTTTCACCCAAGAAGGAGACGGTAATCTGGTTAATGGTTTCGTGTAGACGGTCTATGTTCATTTCTTTTCTATCTTGTACTTAGTCCAAAGAGTTTTCAGGTCCAACCACTGTTACGGGTAATGTTTCTGGTCTCAAGCCCGGGCTTCATGGATTCCATGTTCACGCCTTAGGTGACACAACCAATGGCTGCATGTCGACTGGTATCTTTTTAGACATTTAAGATCTTTTATTTGGTCTTTCTATTTTGAAGGAACGTAGATGTTTGTTAAAAAATTGAATATAGATCCTTTCGTTTATCTCAACATTAAAATTTCTCAAAATATTTACAGGGCCACATTTCAACCCTGCTGGAAAACAACATGGTGCTCCCGAGGACGAGAACCGCCATGCCGGTGATTTAGGGAACATTATCGTTGGTGAAGATGGTATGTTTCTCATTCTTTAACAATTCATTGAATAAGTTTTATTCTTGTCGTGTTGTGCTCCATTTCCTTTTTTGTATATCTTTTACATTATAATGGCTTAAGGTATATTTGTAAAAGTATGCTATTTTGTGTTGTTTTAGATTTCTCCTTTATATTTAGCTAATTTGATGTTGGATTTCATACCTTATTCAAACATTGTTCTATTGATATACTGGTTAAATGCTAATACAATATTTTGTACAGGCAAGGCTAACTTCACCATTACTGACTGCCAGGTTTGTCCCTATTTAATTCATCGTGTTAGGGCATCCAATTGTAAGGGTCTTACTCCTTTTTCTGAGCTTTAGATCATATATGCAGATTCCTCTCTGTGGACATGAATCCATTATCGGAAGGGCTGTTGTGGTTCATGGAGACCCTGATGATCTTGGCAAGGGTAATTTCTCTAACCATTTGCTACTTGATAGTTCTTTGAGCTTTTACAAGTAGTATATTTCTGGGCTATATCTACCATATTCAAACCCAAAAGAAAAGTACTATCAATTAGCTAGGCTGTACAATAGAGAAGTGACTGTTTTTGGAATATTTTGTAGTGAGAATCTCCCTTGTTTTGCATTTTTTCTTTACATCTATAATGCTTATGAACGTGCTTGTAGAAAGGTAGTATGGCTAGAGTAGTTATGTAACAGAGTTCAAATGATTAAATGGGGCAATTAGAACACACAAAACATAAAAGATGATTGGTTGGTTGACGATTATTGATAGATAGTACGGAGGATATCAGAACCAACTTTAAGAGAGCAATAAAAAGAATACTGCATTTAAATGCTTTCTTGAGGTTGTATTCCCTTTATGGAGATATTGGGTGTTCCATGCTTTCTGATATTTGGCATAAGGTCGAGGTGATAGTTTGTGAATATTAATACTTTCATACATATTCACTCTTCGGCTGTTGGGTTTGGAAACTTGAAAAAGCAATTATCAATATTTAAAAGGGGGAAATAACATGGTAGGGATCAGATATAGGACTGACAACCATGTTCAACTATCACTGCCGTCTAAAATGCTTGAGCTAATATGATAGCTAATGGGAAGGATAAGTTTAAGTATTATTCACTCTAAACTTTCAAGTTTGAAGTAATACTATGTAGCTTCTGAAAAAAAATTATGTCATCCAGAAGAGCTTTGTGAGAAAGCTTTTGTAGAGTGATCTATTGACTCAGGTGCACCCAAATGTGCTTTTAAGATTGCAAAGTATTAATTATTCTTAATATTAAACACATTTTATTATTGTATTTTTGCTCAAAGTACCCTAAAGCATTCTGAAATTGTACCTTTTTATGCATATTCTTATCAGTGGTCATTTTTGACATACAGGTGGACATGAACTCAGCTCAAGTACAGGAAATGCTGGTGCTAGAGTAGCCTGTGGTATGCGAATTCGGTTCCTAAGAAATATTACTTTTTCTTCCATTCTACAATTCCCTTTTCAAAGTTATCTGCCGTTCTCCATATTTCTTGATTGCATTTGTTGTCGTTTTATTTCCAGGCATTATTGGTCTGCAAGGTTAAAATTTGTTGCCTTCGTTGCCGTTACTGTTGAAGCATTGAACCCAAGTGCTCTCTAGTGCTTCCAGGAATATTCCTAAACTCTCGTGAATGAATAAAAACACATCACTGTACCTTTTCTTCTTTTGTGACGATTAGATCTTTCACTTATCCATACTTGTCTGCTGTTTTATTAATATATTTCTGGAAATTTGGTTTCTTTTTTTTTTTCTTTTT TCAAACTACACGGACCAACACATTAATTTCACTATTGAAGTATTAACACATGGAGTCCTCTATATAAATTTCCAAAAGCCCTAAGCTTTCTTCATTTCTAGACTCTTCCTTCCATTCAATCTCACCTCTGCCTTCTCTTTCTTCTGTCCAAGGGGTGTTCTGAGATCACAGGAAAGATGGTGAAGGCTGTGGCTGTTCTTGGAAGTAGTGAGGGTGTTAGTGGAACTATCTTTTTCACCCAAGAAGGAGACGGTCCAACCACTGTTACGGGTAATGTTTCTGGTCTCAAGCCCGGGCTTCATGGATTCCATGTTCACGCCTTAGGTGACACAACCAATGGCTGCATGTCGACTGGGCCACATTTCAACCCTGCTGGAAAACAACATGGTGCTCCCGAGGACGAGAACCGCCATGCCGGTGATTTAGGGAACATTATCGTTGGTGAAGATGGCAAGGCTAACTTCACCATTACTGACTGCCAGATTCCTCTCTGTGGACATGAATCCATTATCGGAAGGGCTGTTGTGGTTCATGGAGACCCTGATGATCTTGGCAAGGGTGGACATGAACTCAGCTCAAGTACAGGAAATGCTGGTGCTAGAGTAGCCTGTGGCATTATTGGTCTGCAAGGTTAAAATTTGTTGCCTTCGTTGCCGTTACTGTTGAAGCATTGAACCCAAGTGCTCTCTAGTGCTTCCAGGAATATTCCTAAACTCTCGTGAATGAATAAAAACACATCACTGTACCTTTTCTTCTTTTGTGACGATTAGATCTTTCACTTATCCATACTTGTCTGCTGTTTTATTAATATATTTCTGGAAATTTGGTTTCTTTTTTTTTTTCTTTTT ATGGTGAAGGCTGTGGCTGTTCTTGGAAGTAGTGAGGGTGTTAGTGGAACTATCTTTTTCACCCAAGAAGGAGACGGTCCAACCACTGTTACGGGTAATGTTTCTGGTCTCAAGCCCGGGCTTCATGGATTCCATGTTCACGCCTTAGGTGACACAACCAATGGCTGCATGTCGACTGGGCCACATTTCAACCCTGCTGGAAAACAACATGGTGCTCCCGAGGACGAGAACCGCCATGCCGGTGATTTAGGGAACATTATCGTTGGTGAAGATGGCAAGGCTAACTTCACCATTACTGACTGCCAGATTCCTCTCTGTGGACATGAATCCATTATCGGAAGGGCTGTTGTGGTTCATGGAGACCCTGATGATCTTGGCAAGGGTGGACATGAACTCAGCTCAAGTACAGGAAATGCTGGTGCTAGAGTAGCCTGTGGCATTATTGGTCTGCAAGGTTAA MVKAVAVLGSSEGVSGTIFFTQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKQHGAPEDENRHAGDLGNIIVGEDGKANFTITDCQIPLCGHESIIGRAVVVHGDPDDLGKGGHELSSSTGNAGARVACGIIGLQG
BLAST of CsGy1G026400 vs. NCBI nr
Match: NP_001267697.1 (superoxide dismutase [Cu-Zn]-like [Cucumis sativus] >XP_011658153.1 PREDICTED: superoxide dismutase [Cu-Zn]-like isoform X1 [Cucumis sativus] >XP_011658519.1 PREDICTED: superoxide dismutase [Cu-Zn]-like isoform X1 [Cucumis sativus] >ACA49507.1 cytosolic superoxide dismutase [Cucumis sativus] >KGN66141.1 hypothetical protein Csa_1G573600 [Cucumis sativus]) HSP 1 Score: 316.2 bits (809), Expect = 5.9e-83 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of CsGy1G026400 vs. NCBI nr
Match: XP_008450736.1 (PREDICTED: superoxide dismutase [Cu-Zn] [Cucumis melo] >XP_008450737.1 PREDICTED: superoxide dismutase [Cu-Zn] [Cucumis melo] >ALO62044.1 superoxide dismutase 3 [Cucumis melo]) HSP 1 Score: 296.6 bits (758), Expect = 4.9e-77 Identity = 145/152 (95.39%), Postives = 146/152 (96.05%), Query Frame = 0
BLAST of CsGy1G026400 vs. NCBI nr
Match: AKN08991.1 (superoxide dismutase [Luffa aegyptiaca]) HSP 1 Score: 293.1 bits (749), Expect = 5.4e-76 Identity = 141/152 (92.76%), Postives = 145/152 (95.39%), Query Frame = 0
BLAST of CsGy1G026400 vs. NCBI nr
Match: XP_022158885.1 (superoxide dismutase [Cu-Zn] [Momordica charantia] >XP_022158886.1 superoxide dismutase [Cu-Zn] [Momordica charantia] >XP_022158887.1 superoxide dismutase [Cu-Zn] [Momordica charantia]) HSP 1 Score: 285.0 bits (728), Expect = 1.5e-73 Identity = 138/152 (90.79%), Postives = 143/152 (94.08%), Query Frame = 0
BLAST of CsGy1G026400 vs. NCBI nr
Match: OMO55314.1 (hypothetical protein COLO4_36053 [Corchorus olitorius]) HSP 1 Score: 284.6 bits (727), Expect = 1.9e-73 Identity = 138/152 (90.79%), Postives = 142/152 (93.42%), Query Frame = 0
BLAST of CsGy1G026400 vs. TAIR10
Match: AT1G08830.1 (copper/zinc superoxide dismutase 1) HSP 1 Score: 270.4 bits (690), Expect = 6.8e-73 Identity = 130/152 (85.53%), Postives = 135/152 (88.82%), Query Frame = 0
BLAST of CsGy1G026400 vs. TAIR10
Match: AT5G18100.1 (copper/zinc superoxide dismutase 3) HSP 1 Score: 205.3 bits (521), Expect = 2.7e-53 Identity = 95/150 (63.33%), Postives = 112/150 (74.67%), Query Frame = 0
BLAST of CsGy1G026400 vs. TAIR10
Match: AT2G28190.1 (copper/zinc superoxide dismutase 2) HSP 1 Score: 172.9 bits (437), Expect = 1.5e-43 Identity = 82/121 (67.77%), Postives = 91/121 (75.21%), Query Frame = 0
BLAST of CsGy1G026400 vs. TAIR10
Match: AT1G12520.1 (copper chaperone for SOD1) HSP 1 Score: 56.6 bits (135), Expect = 1.5e-08 Identity = 40/135 (29.63%), Postives = 64/135 (47.41%), Query Frame = 0
BLAST of CsGy1G026400 vs. Swiss-Prot
Match: sp|Q07796|SODC_IPOBA (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas OX=4120 GN=SODCC PE=2 SV=2) HSP 1 Score: 283.5 bits (724), Expect = 1.4e-75 Identity = 137/152 (90.13%), Postives = 142/152 (93.42%), Query Frame = 0
BLAST of CsGy1G026400 vs. Swiss-Prot
Match: sp|P27082|SODC_NICPL (Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia OX=4092 GN=SODCC PE=2 SV=2) HSP 1 Score: 278.1 bits (710), Expect = 5.8e-74 Identity = 134/152 (88.16%), Postives = 141/152 (92.76%), Query Frame = 0
BLAST of CsGy1G026400 vs. Swiss-Prot
Match: sp|P23345|SODC4_MAIZE (Superoxide dismutase [Cu-Zn] 4A OS=Zea mays OX=4577 GN=SODCC.3 PE=2 SV=2) HSP 1 Score: 275.8 bits (704), Expect = 2.9e-73 Identity = 132/152 (86.84%), Postives = 137/152 (90.13%), Query Frame = 0
BLAST of CsGy1G026400 vs. Swiss-Prot
Match: sp|Q9SQL5|SODC_ANACO (Superoxide dismutase [Cu-Zn] OS=Ananas comosus OX=4615 GN=SOD1 PE=2 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 1.4e-72 Identity = 130/152 (85.53%), Postives = 136/152 (89.47%), Query Frame = 0
BLAST of CsGy1G026400 vs. Swiss-Prot
Match: sp|P23346|SODC5_MAIZE (Superoxide dismutase [Cu-Zn] 4AP OS=Zea mays OX=4577 GN=SODCC.2 PE=2 SV=2) HSP 1 Score: 272.7 bits (696), Expect = 2.5e-72 Identity = 130/152 (85.53%), Postives = 136/152 (89.47%), Query Frame = 0
BLAST of CsGy1G026400 vs. TrEMBL
Match: tr|B1PE19|B1PE19_CUCSA (Superoxide dismutase [Cu-Zn] OS=Cucumis sativus OX=3659 GN=SOD PE=2 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 3.9e-83 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of CsGy1G026400 vs. TrEMBL
Match: tr|A0A0S2LL33|A0A0S2LL33_CUCME (Superoxide dismutase [Cu-Zn] OS=Cucumis melo OX=3656 GN=LOC103492226 PE=2 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 3.2e-77 Identity = 145/152 (95.39%), Postives = 146/152 (96.05%), Query Frame = 0
BLAST of CsGy1G026400 vs. TrEMBL
Match: tr|A0A0U2DB27|A0A0U2DB27_LUFAE (Superoxide dismutase [Cu-Zn] OS=Luffa aegyptiaca OX=3670 PE=2 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 3.6e-76 Identity = 141/152 (92.76%), Postives = 145/152 (95.39%), Query Frame = 0
BLAST of CsGy1G026400 vs. TrEMBL
Match: tr|A0A1R3GB52|A0A1R3GB52_9ROSI (Superoxide dismutase [Cu-Zn] OS=Corchorus olitorius OX=93759 GN=COLO4_36053 PE=3 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 1.3e-73 Identity = 138/152 (90.79%), Postives = 142/152 (93.42%), Query Frame = 0
BLAST of CsGy1G026400 vs. TrEMBL
Match: tr|A0A1R3JQK4|A0A1R3JQK4_COCAP (Superoxide dismutase [Cu-Zn] OS=Corchorus capsularis OX=210143 GN=CCACVL1_04695 PE=3 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 2.2e-73 Identity = 138/152 (90.79%), Postives = 141/152 (92.76%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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