CsGy1G025470 (gene) Cucumber (Gy14) v2

NameCsGy1G025470
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 24387835 .. 24392685 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGACAGATCCGAGCAGCTCCTCCACCGCAAATGGAAACAGGAAGAAGAGATCAGTCTCTTCAGAGGAAGAAGCTGATCAAGATGGCTCAAAGAGACGTTGTCCAAACTCATCTCCTCTTCCAACTGCAGGGTGGGCTTTGCTTTTCTTTTCTTTTTTAATACACATAAATATTTGTTTTGTTTTGTTTTGGGTTTTGTTAATTTATAATTTGAGCTTCATAATTTATAGTTTGAGCTTCATGTTCTACCTTGGTGCGTTAATTATCTTCGTATGGTTAGGTTTGATTTTCAATTTTGAAAAATATTATCTCAATTTCTTACCATGATTTGCACATTTAAGCAAATGAGTTGAGCTCTTAGTTAGATTCCCAAAATAATAATAAAGGACATTTATCGTGGATTAGTATGTAAAGGTACACCAGAATATCTTATCTTGACACCATAACACCCTCGTTGTATCCCACTCTCATTTCATTGAGTATAGAGTTATAGATCAACACAAGAGTTAGCAAAAACTAATGATCACAAAGGACCACAGAGAGAGAAGTCCCGATAAGAGATAATAAAAGCATCCCTTTTAGTGTCGTGTTTAAGCGTGCTTTAACACTATGGACCATTTGGCTGGAGGGAAACAACCGAATATTCAACAACAGATTTTCCAGCACTATTAACATTTGAAAGAATATTTGCACTGTTTTTAAAAGTTACTCTTCCAGTGTTATTGCTCTAAACATTATTGCTTTTACTTGACTGCTTTTTTCTGTTTCTTTGGGGCTTATTCTCTAGTCCTCTTCATCATCCTGTACTTTTCTGTGATTTTATGAATATATATTTGATGATAAGAATGCTAAAAAGGTTGTTCACCTTGTGAATATGATTGGGTGCCCTACTGATCTATTCGTATCCTTGTCTAACGCTCTGACTCTTGAGGCTAATTGACAGTTTCCATATATAAGTTTCATCTCAGTAGTCTAAAACAAGTTTATTATCCATTTAATTTCATTTTCTTGAGTCATTGATTTGTTTTATTCTTTAAATTAAAATCCGATTTCATTTATATAATTTATAATAATCTTTTATTTTATTTTCTGTAGTTCTGCACATGAAAGTAGCAAAGCTAGGGATTTGATTCAAGAATTATATGAGAGTTTCATAATTGGAAAGGTGAAAGAATTGAAGAGGATGATGGCACATAGCATCAATAACTCTCAAAGGTGAGTGCTTTAATTAATACCATATTTTCATAATGTTTTCAATAATTTATTTATAATTAAAAATAATAAATTTTATTTTGATCGATTGTAATAGATCCAGATAGATATCAGCAGATTGCTAATAGACACAGATAAATGTCTATTTGGACCGAATCGTAAGTAAAAATAGGATAGAATCTTTTTTTTTAAAATTATGATGCCTATGTTGTTGGACTAAACTAAAAGACTTTCTTTTAGTTCTCTAGTCACTTTTTGTTTTCCAGTAGGAGTTTGCTTTTGTAGATAGATCTTTTTTGCAATGACTCTTGTTCTTAAATGCATGCATCTCTGTTGGTCTTGAAATATGAGGAAAATGTTAAGAATGTGTCAACCTAGTTGAGAGATATTTCGATGCATCTACGGATTCCTTCTCTAGTATCTTGTTAAACAAAATATATAGAAAGTAAAATTTTGCATTTTCAACATTTTTATGATTGAAAACAAATTTCTAACTGAACCATTATAACCATAAATAGTTGAAAAGGCTTAATTATACTTGTAGGTCAAATTATGAGTGGTGCACAAAATATTGCCTATTTTCTGTTTTTTGGCAATGGGCTCCCCAGCCTCTAGCTCTCTTTGTACATAGCTCTCTTTGCTTTTATTTGTTTGAATGCATCGATACTAATTCAAAGTATGATATGAAAGTGTAAGAATATATGAGTGAAGTTGAGATGTGTGGATGCATTATCTTCTCCGATTCGTTATTATTTAATATCTTGTTAAAAGCTGTATAGATTTCATATATATTTGTAATCGATCTTCTCTTATTTTTTATGTTGTGCAGTGGTGAAGATGAGGCTCGAGCTAAAGAAATAGTTGATGCTTTGATTAAGGAAAAAAGAGCAGAATGGGAAAGTGAATTTCGACAATTAGTACGTAACCATTTTAATTAAATTTAATTATGTTCTCAAAATTATTATTTATATTAGGTAATCAAATAAGGCTCATTTTCGTAAATATAATAAAATATTAAAATATATACAAAATCGTGTAACAAAATAAAAGTTCATGATATTTTTCGTTCTTTTTCATCTTCTTTGGGGTTTATTTATCTCATCTTCATATTATTACTTCTTCTTCATTTTTCACTTGTTCTGGTTCGTAATTTCTTCATTCTCTCTTCTAAAATTTATTCTTTCGTCTATTTTTCATTTATTTCTTCTTTTCACTTTCTCAAATTTCTACTTGGCAAACAATCTTGATCATCTCGATCTCATATATTTTCTCTTCTAGATCTTAACGATTGTGTACCAAGATATATAAAAGATCTTATTGGTACACGATCGTGAACAAAAATCATTTGGATCTTGATAGACAATCGTTTAACTCTTAATACGTACAAGTATAATAAAAGATCTTATTCTTATGTATACATGATCGTGTACAAAACCTAAACTATATTACCAATATGATCTTGTACCAAATATAAAAGATCTTGGTACATGATCGTGAACCAAAATGATTTAGATTTTATCCACGATCATTTAGCTTTTGGTACACGATTGTGTACAAAATTTAAACGACATTGGTACAATATCTTGTACAAAATATAAAAGATATTGGTACATGATCGTGAACCAAGATCCTTTAGATTTTATATTCGATCGTGTACCAATATATTTAAATGATCATTTAGAAGAAGAATGACACGCGCTCGTATGGTTAGTGTTGATACTACCCTATATGATCGTGTATCATTTTTCTTACGCAATCGTGTATTATGATCGTTTAGAAGAATAATTATACGTGCATGTGTGACCGATTAATCGCATGTTGACTGGAGCATTTTTGGTGTAGACTTGTGAACTTTTTTCATTTTTGAAATTGTTCCATTCATAGTAAATATTTTGACATTTTGTTATACTTTTTTAAAATCTCCATAGAATAAAGCAGTAAAAATACATCCAATAATTCATAATTGCCTTTTCAGTTAATGAATGAATTTGATGGGATTGCAAACGCTCAACTTAAACCTCTTCCATCAACACCAAGGTCAGGTTTTTAATGCATGACACAGACAAACGTTGAAATTGTAGTTTTAATATAATTCTGACTATTATGCTTCATTATGTTAACATCTTGTCTGCTCTTTTTTCTTTCTCCAATAAAAAATTATAGGAAATACAAATTACGTTTTTGGTATGAAATTATGGACACCATGTACCATGGCGATAAGATAAAATCTAGTACAGATAATCAGGTATTGAAATTTGAAATTTGTGATGCCTACTCCAACACTGTCATCACCAACGAACCAATATCCTTTGCTATGGTCGAACTCTTCCTCAAAGAAAAAGGGTCTGAAACTCCTATTTCAAGAGAAAAAACAATGGACTTGATCTCTTTTGATCATCTCCAATTTCGCCTACAACATGGAATTGGCTATGTCGAAGGTCTTGCTGTCAAGTCCAGCAAATATTGGAAATCTAATGATTTTGTTTTGGGAGTCAAAGTTATTGATGAACAGATTTTGGAGAAGATTGGTACGATTGAAGAGGCCTGTTCTGGACCCTTTAGAGTTCTGCATAAACGATCCAAAGGTATATAGTTGTATGTTAATTAATTCTTTCTTTGTATGATATATACCAATTACTGATATATATATATATATATATTATTGCCTAAAATATATATATATTTTTTAATTTGTATAATTCTAATTAGGGAATAAAAAGCATTTCCCCCCAACTAAGGGATGTGAAATATGGCGATTAGTTGGGGTAAGGAAAAATGGTGTATATCACAGAATCTTATCTTCAGAAGAACTAGGCATCGAAACTGTGGGAGTTTTCTTGTGGAAATATCATGAAATGAGTTCTCCAACTTTGGAAGAGGTAATACGTAACAGTACAACCTTTATAAAAGACATTTAAATGTATCAAAATTAGTTATCTTGATCTTTTAAATTATTGGGAGTATTTTATTAACCTTCGTGTGTATATATATATATACATGCTCAATAGTTTCTTAAAAGGAGTATGTCCAAGCTAGATGAGTGGGATGACATTGTTAAGCATGCAAAGACATGTGTTGGTTATGATCCAGCTGATTATGATCAAACAGTAAGTTTTTCAACTACTCTATCTCACTCTCTCTCTCTAGTATTAGGTTTTATATAATTAAATTCTTCTTCATTTAAGCCTTTCTTATTTATAAACAGGATCACAATAATAATAATTTGATGGGAGCTGGTCTGCAAGTTAATAATCACCAAAGTCAAATCGTTGAGGTTATAAGTGATTTCTCTCGCTATAGCTATTGTTTGATGACATATAAATGAAAGTTCTTCCTCACCCATCAACTTCTTAAGCTTTTTCGTCGGTTGATAAATTTAAGATTGTTTTTATTCATATTATATGCCAAAAACAGAACAATAATGATAATTTGGTGGGAACTGAGCAACTCGCTAATGCCAATGAGAGTTTGGGAGTTCTTAATGACCAAAATCAAAGCGTTGTTCAAGTTAATTTCGATCAGAATTTGGTAGTTGCTAATTATTACCAAAATGAAAGCTTTGATCAGGTTATGGTTCTTCCCTCTCTTTATGTTCTCTTTTTCTATATTGAAAACAAATGATGTTAGACTAATTAA

mRNA sequence

ATGATGACAGATCCGAGCAGCTCCTCCACCGCAAATGGAAACAGGAAGAAGAGATCAGTCTCTTCAGAGGAAGAAGCTGATCAAGATGGCTCAAAGAGACGTTGTCCAAACTCATCTCCTCTTCCAACTGCAGGTGGTGAAGATGAGGCTCGAGCTAAAGAAATAGTTGATGCTTTGATTAAGGAAAAAAGAGCAGAATGGGAAAGTGAATTTCGACAATTATTATTGATGAACAGATTTTGGAGAAGATTGGTACGATTGAAGAGGCCTGTTCTGGACCCTTTAGAGTTCTGCATAAACGATCCAAAGGATCACAATAATAATAATTTGATGGGAGCTGGTCTGCAAGTTAATAATCACCAAAGTCAAATCGTTGAGAACAATAATGATAATTTGGTGGGAACTGAGCAACTCGCTAATGCCAATGAGAGTTTGGGAGTTCTTAATGACCAAAATCAAAGCGTTGTTCAAACTAATTAA

Coding sequence (CDS)

ATGATGACAGATCCGAGCAGCTCCTCCACCGCAAATGGAAACAGGAAGAAGAGATCAGTCTCTTCAGAGGAAGAAGCTGATCAAGATGGCTCAAAGAGACGTTGTCCAAACTCATCTCCTCTTCCAACTGCAGGTGGTGAAGATGAGGCTCGAGCTAAAGAAATAGTTGATGCTTTGATTAAGGAAAAAAGAGCAGAATGGGAAAGTGAATTTCGACAATTATTATTGATGAACAGATTTTGGAGAAGATTGGTACGATTGAAGAGGCCTGTTCTGGACCCTTTAGAGTTCTGCATAAACGATCCAAAGGATCACAATAATAATAATTTGATGGGAGCTGGTCTGCAAGTTAATAATCACCAAAGTCAAATCGTTGAGAACAATAATGATAATTTGGTGGGAACTGAGCAACTCGCTAATGCCAATGAGAGTTTGGGAGTTCTTAATGACCAAAATCAAAGCGTTGTTCAAACTAATTAA

Protein sequence

MMTDPSSSSTANGNRKKRSVSSEEEADQDGSKRRCPNSSPLPTAGGEDEARAKEIVDALIKEKRAEWESEFRQLLLMNRFWRRLVRLKRPVLDPLEFCINDPKDHNNNNLMGAGLQVNNHQSQIVENNNDNLVGTEQLANANESLGVLNDQNQSVVQTN
BLAST of CsGy1G025470 vs. NCBI nr
Match: KGN66037.1 (hypothetical protein Csa_1G569150 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 3.8e-24
Identity = 132/254 (51.97%), Postives = 138/254 (54.33%), Query Frame = 0

Query: 1   MMTDPSSXXXXXXXXXXXXXXXXXXXDQDGSKRRCPNSSPLPTAG--------------- 60
           MMTDPSS XXXXXXXXXXXXXXXXX DQDGSKRRCPNSSPLPTAG               
Sbjct: 1   MMTDPSSSXXXXXXXXXXXXXXXXXADQDGSKRRCPNSSPLPTAGSAHESSKARDLIQEL 60

Query: 61  -------------------------GEDEARAKEIVDALIKEKRAEWESEFRQLLLMN-- 120
                                    GEDEARAKEIVDALIKEKRAEWESEFRQLL+    
Sbjct: 61  YESFIIGKVKELKRMMAHSINNSQSGEDEARAKEIVDALIKEKRAEWESEFRQLLMNEFD 120

Query: 121 -------------------RFWRRLVR----------------LKRPV------------ 160
                              RFW  ++                 LKR +            
Sbjct: 121 GIANAQLKPLPSTPRKYKLRFWYEIMDTMYHGDKIKSSTDNQFLKRSMSKLDEWDDIVKH 180

BLAST of CsGy1G025470 vs. NCBI nr
Match: XP_011648532.1 (PREDICTED: uncharacterized protein LOC101206913 [Cucumis sativus])

HSP 1 Score: 88.6 bits (218), Expect = 2.1e-14
Identity = 76/120 (63.33%), Postives = 76/120 (63.33%), Query Frame = 0

Query: 1   MMTDPSSXXXXXXXXXXXXXXXXXXXDQDGSKRRCPNSSPLPTAG--------------- 60
           MMTDPSS XXXXXXXXXXXXXXXXX DQDGSKRRCPNSSPLPTAG               
Sbjct: 1   MMTDPSSSXXXXXXXXXXXXXXXXXADQDGSKRRCPNSSPLPTAGSAHESSKARDLIQEL 60

Query: 61  -------------------------GEDEARAKEIVDALIKEKRAEWESEFRQLLLMNRF 81
                                    GEDEARAKEIVDALIKEKRAEWESEFRQ LLMN F
Sbjct: 61  YESFIIGKVKELKRMMAHSINNSQSGEDEARAKEIVDALIKEKRAEWESEFRQ-LLMNEF 119

BLAST of CsGy1G025470 vs. NCBI nr
Match: XP_011659761.1 (PREDICTED: uncharacterized protein LOC105436264 [Cucumis sativus])

HSP 1 Score: 60.5 bits (145), Expect = 6.1e-06
Identity = 53/67 (79.10%), Postives = 55/67 (82.09%), Query Frame = 0

Query: 93  DPLEFCINDPKDHNNNNLMGAGLQVNNHQSQIVEXXXXXXXXXXXXXXXXXXXGVLNDQN 152
           DP ++   D  DHNNNNLMGAGLQVNNHQSQIV XXXXXXXXXXXXXXXXXXX    DQN
Sbjct: 173 DPADY---DQTDHNNNNLMGAGLQVNNHQSQIVXXXXXXXXXXXXXXXXXXXXXXXXDQN 232

Query: 153 QSVVQTN 160
           QSVVQ N
Sbjct: 233 QSVVQVN 236

BLAST of CsGy1G025470 vs. NCBI nr
Match: XP_008450594.1 (PREDICTED: uncharacterized protein LOC103492137 isoform X1 [Cucumis melo])

HSP 1 Score: 55.5 bits (132), Expect = 2.0e-04
Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 0

Query: 32  KRRCPNSSPLPTAGGEDEARAKEIVDALIKEKRAEWESEFRQLLL 77
           +RR PN++   +  GEDE +A+EIVD LIKEKRA+WESEFRQLL+
Sbjct: 61  ERRMPNTTN-NSLSGEDEIQAREIVDGLIKEKRAKWESEFRQLLI 104

BLAST of CsGy1G025470 vs. NCBI nr
Match: XP_008450595.1 (PREDICTED: calmodulin-binding protein 60 B-like isoform X2 [Cucumis melo])

HSP 1 Score: 55.5 bits (132), Expect = 2.0e-04
Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 0

Query: 32  KRRCPNSSPLPTAGGEDEARAKEIVDALIKEKRAEWESEFRQLLL 77
           +RR PN++   +  GEDE +A+EIVD LIKEKRA+WESEFRQLL+
Sbjct: 61  ERRMPNTTN-NSLSGEDEIQAREIVDGLIKEKRAKWESEFRQLLI 104

BLAST of CsGy1G025470 vs. TrEMBL
Match: tr|A0A0A0LYY9|A0A0A0LYY9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569150 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.5e-24
Identity = 132/254 (51.97%), Postives = 138/254 (54.33%), Query Frame = 0

Query: 1   MMTDPSSXXXXXXXXXXXXXXXXXXXDQDGSKRRCPNSSPLPTAG--------------- 60
           MMTDPSS XXXXXXXXXXXXXXXXX DQDGSKRRCPNSSPLPTAG               
Sbjct: 1   MMTDPSSSXXXXXXXXXXXXXXXXXADQDGSKRRCPNSSPLPTAGSAHESSKARDLIQEL 60

Query: 61  -------------------------GEDEARAKEIVDALIKEKRAEWESEFRQLLLMN-- 120
                                    GEDEARAKEIVDALIKEKRAEWESEFRQLL+    
Sbjct: 61  YESFIIGKVKELKRMMAHSINNSQSGEDEARAKEIVDALIKEKRAEWESEFRQLLMNEFD 120

Query: 121 -------------------RFWRRLVR----------------LKRPV------------ 160
                              RFW  ++                 LKR +            
Sbjct: 121 GIANAQLKPLPSTPRKYKLRFWYEIMDTMYHGDKIKSSTDNQFLKRSMSKLDEWDDIVKH 180

BLAST of CsGy1G025470 vs. TrEMBL
Match: tr|A0A1S3BNX7|A0A1S3BNX7_CUCME (calmodulin-binding protein 60 B-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492137 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.3e-04
Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 0

Query: 32  KRRCPNSSPLPTAGGEDEARAKEIVDALIKEKRAEWESEFRQLLL 77
           +RR PN++   +  GEDE +A+EIVD LIKEKRA+WESEFRQLL+
Sbjct: 61  ERRMPNTTN-NSLSGEDEIQAREIVDGLIKEKRAKWESEFRQLLI 104

BLAST of CsGy1G025470 vs. TrEMBL
Match: tr|A0A1S3BQK2|A0A1S3BQK2_CUCME (uncharacterized protein LOC103492137 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492137 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.3e-04
Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 0

Query: 32  KRRCPNSSPLPTAGGEDEARAKEIVDALIKEKRAEWESEFRQLLL 77
           +RR PN++   +  GEDE +A+EIVD LIKEKRA+WESEFRQLL+
Sbjct: 61  ERRMPNTTN-NSLSGEDEIQAREIVDGLIKEKRAKWESEFRQLLI 104

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN66037.13.8e-2451.97hypothetical protein Csa_1G569150 [Cucumis sativus][more]
XP_011648532.12.1e-1463.33PREDICTED: uncharacterized protein LOC101206913 [Cucumis sativus][more]
XP_011659761.16.1e-0679.10PREDICTED: uncharacterized protein LOC105436264 [Cucumis sativus][more]
XP_008450594.12.0e-0464.44PREDICTED: uncharacterized protein LOC103492137 isoform X1 [Cucumis melo][more]
XP_008450595.12.0e-0464.44PREDICTED: calmodulin-binding protein 60 B-like isoform X2 [Cucumis melo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LYY9|A0A0A0LYY9_CUCSA2.5e-2451.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569150 PE=4 SV=1[more]
tr|A0A1S3BNX7|A0A1S3BNX7_CUCME1.3e-0464.44calmodulin-binding protein 60 B-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3BQK2|A0A1S3BQK2_CUCME1.3e-0464.44uncharacterized protein LOC103492137 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006950 response to stress
cellular_component GO:0005575 cellular_component
molecular_function GO:0005516 calmodulin binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G025470.1CsGy1G025470.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G025470Csa1G569150Cucumber (Chinese Long) v2cgybcuB002
CsGy1G025470CSPI01G26190Wild cucumber (PI 183967)cgybcpiB002
CsGy1G025470MELO3C015283.2Melon (DHL92) v3.6.1cgybmedB032
CsGy1G025470CsaV3_1G038570Cucumber (Chinese Long) v3cgybcucB001
The following gene(s) are paralogous to this gene:

None