CsGy1G025470 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGACAGATCCGAGCAGCTCCTCCACCGCAAATGGAAACAGGAAGAAGAGATCAGTCTCTTCAGAGGAAGAAGCTGATCAAGATGGCTCAAAGAGACGTTGTCCAAACTCATCTCCTCTTCCAACTGCAGGGTGGGCTTTGCTTTTCTTTTCTTTTTTAATACACATAAATATTTGTTTTGTTTTGTTTTGGGTTTTGTTAATTTATAATTTGAGCTTCATAATTTATAGTTTGAGCTTCATGTTCTACCTTGGTGCGTTAATTATCTTCGTATGGTTAGGTTTGATTTTCAATTTTGAAAAATATTATCTCAATTTCTTACCATGATTTGCACATTTAAGCAAATGAGTTGAGCTCTTAGTTAGATTCCCAAAATAATAATAAAGGACATTTATCGTGGATTAGTATGTAAAGGTACACCAGAATATCTTATCTTGACACCATAACACCCTCGTTGTATCCCACTCTCATTTCATTGAGTATAGAGTTATAGATCAACACAAGAGTTAGCAAAAACTAATGATCACAAAGGACCACAGAGAGAGAAGTCCCGATAAGAGATAATAAAAGCATCCCTTTTAGTGTCGTGTTTAAGCGTGCTTTAACACTATGGACCATTTGGCTGGAGGGAAACAACCGAATATTCAACAACAGATTTTCCAGCACTATTAACATTTGAAAGAATATTTGCACTGTTTTTAAAAGTTACTCTTCCAGTGTTATTGCTCTAAACATTATTGCTTTTACTTGACTGCTTTTTTCTGTTTCTTTGGGGCTTATTCTCTAGTCCTCTTCATCATCCTGTACTTTTCTGTGATTTTATGAATATATATTTGATGATAAGAATGCTAAAAAGGTTGTTCACCTTGTGAATATGATTGGGTGCCCTACTGATCTATTCGTATCCTTGTCTAACGCTCTGACTCTTGAGGCTAATTGACAGTTTCCATATATAAGTTTCATCTCAGTAGTCTAAAACAAGTTTATTATCCATTTAATTTCATTTTCTTGAGTCATTGATTTGTTTTATTCTTTAAATTAAAATCCGATTTCATTTATATAATTTATAATAATCTTTTATTTTATTTTCTGTAGTTCTGCACATGAAAGTAGCAAAGCTAGGGATTTGATTCAAGAATTATATGAGAGTTTCATAATTGGAAAGGTGAAAGAATTGAAGAGGATGATGGCACATAGCATCAATAACTCTCAAAGGTGAGTGCTTTAATTAATACCATATTTTCATAATGTTTTCAATAATTTATTTATAATTAAAAATAATAAATTTTATTTTGATCGATTGTAATAGATCCAGATAGATATCAGCAGATTGCTAATAGACACAGATAAATGTCTATTTGGACCGAATCGTAAGTAAAAATAGGATAGAATCTTTTTTTTTAAAATTATGATGCCTATGTTGTTGGACTAAACTAAAAGACTTTCTTTTAGTTCTCTAGTCACTTTTTGTTTTCCAGTAGGAGTTTGCTTTTGTAGATAGATCTTTTTTGCAATGACTCTTGTTCTTAAATGCATGCATCTCTGTTGGTCTTGAAATATGAGGAAAATGTTAAGAATGTGTCAACCTAGTTGAGAGATATTTCGATGCATCTACGGATTCCTTCTCTAGTATCTTGTTAAACAAAATATATAGAAAGTAAAATTTTGCATTTTCAACATTTTTATGATTGAAAACAAATTTCTAACTGAACCATTATAACCATAAATAGTTGAAAAGGCTTAATTATACTTGTAGGTCAAATTATGAGTGGTGCACAAAATATTGCCTATTTTCTGTTTTTTGGCAATGGGCTCCCCAGCCTCTAGCTCTCTTTGTACATAGCTCTCTTTGCTTTTATTTGTTTGAATGCATCGATACTAATTCAAAGTATGATATGAAAGTGTAAGAATATATGAGTGAAGTTGAGATGTGTGGATGCATTATCTTCTCCGATTCGTTATTATTTAATATCTTGTTAAAAGCTGTATAGATTTCATATATATTTGTAATCGATCTTCTCTTATTTTTTATGTTGTGCAGTGGTGAAGATGAGGCTCGAGCTAAAGAAATAGTTGATGCTTTGATTAAGGAAAAAAGAGCAGAATGGGAAAGTGAATTTCGACAATTAGTACGTAACCATTTTAATTAAATTTAATTATGTTCTCAAAATTATTATTTATATTAGGTAATCAAATAAGGCTCATTTTCGTAAATATAATAAAATATTAAAATATATACAAAATCGTGTAACAAAATAAAAGTTCATGATATTTTTCGTTCTTTTTCATCTTCTTTGGGGTTTATTTATCTCATCTTCATATTATTACTTCTTCTTCATTTTTCACTTGTTCTGGTTCGTAATTTCTTCATTCTCTCTTCTAAAATTTATTCTTTCGTCTATTTTTCATTTATTTCTTCTTTTCACTTTCTCAAATTTCTACTTGGCAAACAATCTTGATCATCTCGATCTCATATATTTTCTCTTCTAGATCTTAACGATTGTGTACCAAGATATATAAAAGATCTTATTGGTACACGATCGTGAACAAAAATCATTTGGATCTTGATAGACAATCGTTTAACTCTTAATACGTACAAGTATAATAAAAGATCTTATTCTTATGTATACATGATCGTGTACAAAACCTAAACTATATTACCAATATGATCTTGTACCAAATATAAAAGATCTTGGTACATGATCGTGAACCAAAATGATTTAGATTTTATCCACGATCATTTAGCTTTTGGTACACGATTGTGTACAAAATTTAAACGACATTGGTACAATATCTTGTACAAAATATAAAAGATATTGGTACATGATCGTGAACCAAGATCCTTTAGATTTTATATTCGATCGTGTACCAATATATTTAAATGATCATTTAGAAGAAGAATGACACGCGCTCGTATGGTTAGTGTTGATACTACCCTATATGATCGTGTATCATTTTTCTTACGCAATCGTGTATTATGATCGTTTAGAAGAATAATTATACGTGCATGTGTGACCGATTAATCGCATGTTGACTGGAGCATTTTTGGTGTAGACTTGTGAACTTTTTTCATTTTTGAAATTGTTCCATTCATAGTAAATATTTTGACATTTTGTTATACTTTTTTAAAATCTCCATAGAATAAAGCAGTAAAAATACATCCAATAATTCATAATTGCCTTTTCAGTTAATGAATGAATTTGATGGGATTGCAAACGCTCAACTTAAACCTCTTCCATCAACACCAAGGTCAGGTTTTTAATGCATGACACAGACAAACGTTGAAATTGTAGTTTTAATATAATTCTGACTATTATGCTTCATTATGTTAACATCTTGTCTGCTCTTTTTTCTTTCTCCAATAAAAAATTATAGGAAATACAAATTACGTTTTTGGTATGAAATTATGGACACCATGTACCATGGCGATAAGATAAAATCTAGTACAGATAATCAGGTATTGAAATTTGAAATTTGTGATGCCTACTCCAACACTGTCATCACCAACGAACCAATATCCTTTGCTATGGTCGAACTCTTCCTCAAAGAAAAAGGGTCTGAAACTCCTATTTCAAGAGAAAAAACAATGGACTTGATCTCTTTTGATCATCTCCAATTTCGCCTACAACATGGAATTGGCTATGTCGAAGGTCTTGCTGTCAAGTCCAGCAAATATTGGAAATCTAATGATTTTGTTTTGGGAGTCAAAGTTATTGATGAACAGATTTTGGAGAAGATTGGTACGATTGAAGAGGCCTGTTCTGGACCCTTTAGAGTTCTGCATAAACGATCCAAAGGTATATAGTTGTATGTTAATTAATTCTTTCTTTGTATGATATATACCAATTACTGATATATATATATATATATATTATTGCCTAAAATATATATATATTTTTTAATTTGTATAATTCTAATTAGGGAATAAAAAGCATTTCCCCCCAACTAAGGGATGTGAAATATGGCGATTAGTTGGGGTAAGGAAAAATGGTGTATATCACAGAATCTTATCTTCAGAAGAACTAGGCATCGAAACTGTGGGAGTTTTCTTGTGGAAATATCATGAAATGAGTTCTCCAACTTTGGAAGAGGTAATACGTAACAGTACAACCTTTATAAAAGACATTTAAATGTATCAAAATTAGTTATCTTGATCTTTTAAATTATTGGGAGTATTTTATTAACCTTCGTGTGTATATATATATATACATGCTCAATAGTTTCTTAAAAGGAGTATGTCCAAGCTAGATGAGTGGGATGACATTGTTAAGCATGCAAAGACATGTGTTGGTTATGATCCAGCTGATTATGATCAAACAGTAAGTTTTTCAACTACTCTATCTCACTCTCTCTCTCTAGTATTAGGTTTTATATAATTAAATTCTTCTTCATTTAAGCCTTTCTTATTTATAAACAGGATCACAATAATAATAATTTGATGGGAGCTGGTCTGCAAGTTAATAATCACCAAAGTCAAATCGTTGAGGTTATAAGTGATTTCTCTCGCTATAGCTATTGTTTGATGACATATAAATGAAAGTTCTTCCTCACCCATCAACTTCTTAAGCTTTTTCGTCGGTTGATAAATTTAAGATTGTTTTTATTCATATTATATGCCAAAAACAGAACAATAATGATAATTTGGTGGGAACTGAGCAACTCGCTAATGCCAATGAGAGTTTGGGAGTTCTTAATGACCAAAATCAAAGCGTTGTTCAAGTTAATTTCGATCAGAATTTGGTAGTTGCTAATTATTACCAAAATGAAAGCTTTGATCAGGTTATGGTTCTTCCCTCTCTTTATGTTCTCTTTTTCTATATTGAAAACAAATGATGTTAGACTAATTAA ATGATGACAGATCCGAGCAGCTCCTCCACCGCAAATGGAAACAGGAAGAAGAGATCAGTCTCTTCAGAGGAAGAAGCTGATCAAGATGGCTCAAAGAGACGTTGTCCAAACTCATCTCCTCTTCCAACTGCAGGTGGTGAAGATGAGGCTCGAGCTAAAGAAATAGTTGATGCTTTGATTAAGGAAAAAAGAGCAGAATGGGAAAGTGAATTTCGACAATTATTATTGATGAACAGATTTTGGAGAAGATTGGTACGATTGAAGAGGCCTGTTCTGGACCCTTTAGAGTTCTGCATAAACGATCCAAAGGATCACAATAATAATAATTTGATGGGAGCTGGTCTGCAAGTTAATAATCACCAAAGTCAAATCGTTGAGAACAATAATGATAATTTGGTGGGAACTGAGCAACTCGCTAATGCCAATGAGAGTTTGGGAGTTCTTAATGACCAAAATCAAAGCGTTGTTCAAACTAATTAA ATGATGACAGATCCGAGCAGCTCCTCCACCGCAAATGGAAACAGGAAGAAGAGATCAGTCTCTTCAGAGGAAGAAGCTGATCAAGATGGCTCAAAGAGACGTTGTCCAAACTCATCTCCTCTTCCAACTGCAGGTGGTGAAGATGAGGCTCGAGCTAAAGAAATAGTTGATGCTTTGATTAAGGAAAAAAGAGCAGAATGGGAAAGTGAATTTCGACAATTATTATTGATGAACAGATTTTGGAGAAGATTGGTACGATTGAAGAGGCCTGTTCTGGACCCTTTAGAGTTCTGCATAAACGATCCAAAGGATCACAATAATAATAATTTGATGGGAGCTGGTCTGCAAGTTAATAATCACCAAAGTCAAATCGTTGAGAACAATAATGATAATTTGGTGGGAACTGAGCAACTCGCTAATGCCAATGAGAGTTTGGGAGTTCTTAATGACCAAAATCAAAGCGTTGTTCAAACTAATTAA MMTDPSSSSTANGNRKKRSVSSEEEADQDGSKRRCPNSSPLPTAGGEDEARAKEIVDALIKEKRAEWESEFRQLLLMNRFWRRLVRLKRPVLDPLEFCINDPKDHNNNNLMGAGLQVNNHQSQIVENNNDNLVGTEQLANANESLGVLNDQNQSVVQTN
BLAST of CsGy1G025470 vs. NCBI nr
Match: KGN66037.1 (hypothetical protein Csa_1G569150 [Cucumis sativus]) HSP 1 Score: 120.9 bits (302), Expect = 3.8e-24 Identity = 132/254 (51.97%), Postives = 138/254 (54.33%), Query Frame = 0
BLAST of CsGy1G025470 vs. NCBI nr
Match: XP_011648532.1 (PREDICTED: uncharacterized protein LOC101206913 [Cucumis sativus]) HSP 1 Score: 88.6 bits (218), Expect = 2.1e-14 Identity = 76/120 (63.33%), Postives = 76/120 (63.33%), Query Frame = 0
BLAST of CsGy1G025470 vs. NCBI nr
Match: XP_011659761.1 (PREDICTED: uncharacterized protein LOC105436264 [Cucumis sativus]) HSP 1 Score: 60.5 bits (145), Expect = 6.1e-06 Identity = 53/67 (79.10%), Postives = 55/67 (82.09%), Query Frame = 0
BLAST of CsGy1G025470 vs. NCBI nr
Match: XP_008450594.1 (PREDICTED: uncharacterized protein LOC103492137 isoform X1 [Cucumis melo]) HSP 1 Score: 55.5 bits (132), Expect = 2.0e-04 Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 0
BLAST of CsGy1G025470 vs. NCBI nr
Match: XP_008450595.1 (PREDICTED: calmodulin-binding protein 60 B-like isoform X2 [Cucumis melo]) HSP 1 Score: 55.5 bits (132), Expect = 2.0e-04 Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 0
BLAST of CsGy1G025470 vs. TrEMBL
Match: tr|A0A0A0LYY9|A0A0A0LYY9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569150 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.5e-24 Identity = 132/254 (51.97%), Postives = 138/254 (54.33%), Query Frame = 0
BLAST of CsGy1G025470 vs. TrEMBL
Match: tr|A0A1S3BNX7|A0A1S3BNX7_CUCME (calmodulin-binding protein 60 B-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492137 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.3e-04 Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 0
BLAST of CsGy1G025470 vs. TrEMBL
Match: tr|A0A1S3BQK2|A0A1S3BQK2_CUCME (uncharacterized protein LOC103492137 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492137 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.3e-04 Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |