CsGy1G025420 (gene) Cucumber (Gy14) v2

NameCsGy1G025420
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionCalcium-transporting ATPase
LocationChr1 : 24343020 .. 24344254 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTACTGTTGCTGTTACTATTGTGGTTGTGGCAATTCCGGAAGGTTTACCTTTGGCTGTCACCCTAACACTAGCGTACTCCACGAGGAAAATGATGGCTGGTAAAGCACTGGTTCTTAGGCTGTCTGCTTGTGAAACCATGTGCTCTACAACAACAATATGCAGCGATAAAGACTAGGAAAAATTGAAGTTTAATTTCATATAAATATCTATTTTGAGATGCTTTTGCAATTTATCCTATTATCAATCGTGACTTAAAATTTTAGAATCTAAAAAATTACATTATATAGAGGTGCATCGTTCTTCCTACTCTGGTCGCATAGGGGTGCATGCATAGAACCACAAAAAGTTATTTCATTACACAATTGAGGGAGAAGTCTTTCCCTACTCAACAATGAAAATACTCATGAAAGCATACCTCAACAAGGGGATATGCAACCCAAAAAATAGTCCATATACTAACTCAACCCAAAGACAAAAGTAGGATGCTAGGCTAAAAGACAAAAATGGGAAATGCAAACCAAAGATTAACCAAAGACAAGAATTGGACCCACTTCAAACCAAAAATAAGAAGCAAGGCTCTGAAAAAACAGAAAAACAAGAATTGGTAGAAGGTAGGAAAATATGGGAGTGTCTTATTGGATTTAACAATTTAAACAATTCTTATTTTTCTGTTTTTTCTAGAGCCTTGCTTCTTGTCTTTGTTTTGAATTGAGTCCGATTCTTGTCTTTTGGTTAGTCCATGGTTTGGGATTGCCCACTTTCATTTTCTTGCTTTTTGTCTTTGGTTCGAAGTGGGTCCGATTCTTGTCTTTGCTTAGTCTTTGGTTTGGAATAATCCACTTTCCTTTTCTTCCCTTTATAGACGCCTTTCCCATTTTTGTCTTTTTCGATCTAGACTCTAGAGTCTAGCACCTTGCTTCTTGTCTTTGGGTTGAGTAAGTATTGACTATTTTTTGGTTATAGATCATTCAATCCAATGGCAGTGGATATCAGGGAAGGGAAAATGAAGAAGAAGAAGGAAGCGAAAAAAAGAAGAAGAAATGGAGGTGGCATTTGACAGCTGAATCGTTTGGTAAATATGAAGATAAGGAGGGAAGAAGAAGAAGTATATCCTCGTTGCGGTGCATGAGAGGAAGACAGTTTAGAGGAATGGGTGGAGAAACAAACACAAGCAGAAGAAGAGCAAGGAAAAAAGTTAAACCTATATTAAAATATTGTTTCAAATTTTAA

mRNA sequence

ATGGTTACTGTTGCTGTTACTATTGTGGTTGTGGCAATTCCGGAAGGTTTACCTTTGGCTGTCACCCTAACACTAGCGTACTCCACGAGGAAAATGATGGCTGGTAAAGCACTGATCATTCAATCCAATGGCAGTGGATATCAGGGAAGGGAAAATGAAGAAGAAGAAGGAAGCGAAAAAAAGAAGAAGAAATGGAGGTGGCATTTGACAGCTGAATCGTTTGGTAAATATGAAGATAAGGAGGGAAGAAGAAGAAGTATATCCTCGTTGCGGTGCATGAGAGGAAGACAGTTTAGAGGAATGGGTGGAGAAACAAACACAAGCAGAAGAAGAGCAAGGAAAAAAGTTAAACCTATATTAAAATATTGTTTCAAATTTTAA

Coding sequence (CDS)

ATGGTTACTGTTGCTGTTACTATTGTGGTTGTGGCAATTCCGGAAGGTTTACCTTTGGCTGTCACCCTAACACTAGCGTACTCCACGAGGAAAATGATGGCTGGTAAAGCACTGATCATTCAATCCAATGGCAGTGGATATCAGGGAAGGGAAAATGAAGAAGAAGAAGGAAGCGAAAAAAAGAAGAAGAAATGGAGGTGGCATTTGACAGCTGAATCGTTTGGTAAATATGAAGATAAGGAGGGAAGAAGAAGAAGTATATCCTCGTTGCGGTGCATGAGAGGAAGACAGTTTAGAGGAATGGGTGGAGAAACAAACACAAGCAGAAGAAGAGCAAGGAAAAAAGTTAAACCTATATTAAAATATTGTTTCAAATTTTAA

Protein sequence

MVTVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALIIQSNGSGYQGRENEEEEGSEKKKKKWRWHLTAESFGKYEDKEGRRRSISSLRCMRGRQFRGMGGETNTSRRRARKKVKPILKYCFKF
BLAST of CsGy1G025420 vs. NCBI nr
Match: KGN66033.1 (hypothetical protein Csa_1G569110 [Cucumis sativus])

HSP 1 Score: 67.8 bits (164), Expect = 3.0e-08
Identity = 38/41 (92.68%), Postives = 41/41 (100.00%), Query Frame = 0

Query: 1   MVTVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALIIQ 42
           MVTVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKAL+++
Sbjct: 375 MVTVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALVLR 415

BLAST of CsGy1G025420 vs. NCBI nr
Match: XP_010928700.1 (PREDICTED: calcium-transporting ATPase 8, plasma membrane-type-like [Elaeis guineensis])

HSP 1 Score: 59.7 bits (143), Expect = 8.3e-06
Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 0

Query: 1   MVTVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALI 40
           M+T+AVTIVVVA+PEGLPLAVTLTLAYS RKMMA KAL+
Sbjct: 423 MLTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALV 461

BLAST of CsGy1G025420 vs. NCBI nr
Match: XP_004488018.1 (PREDICTED: calcium-transporting ATPase 8, plasma membrane-type isoform X1 [Cicer arietinum] >XP_012574035.1 PREDICTED: calcium-transporting ATPase 8, plasma membrane-type isoform X1 [Cicer arietinum] >XP_012574036.1 PREDICTED: calcium-transporting ATPase 8, plasma membrane-type isoform X1 [Cicer arietinum])

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05
Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 0

Query: 1   MVTVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALI 40
           ++TVAVTIVVVA+PEGLPLAVTLTLAYS RKMMA KAL+
Sbjct: 440 IITVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALV 478

BLAST of CsGy1G025420 vs. NCBI nr
Match: XP_003595106.2 (calcium-transporting ATPase 8, plasma membrane-type isoform X1 [Medicago truncatula] >XP_024633267.1 calcium-transporting ATPase 8, plasma membrane-type isoform X1 [Medicago truncatula] >AES65357.2 calcium-transporting ATPase 8, plasma membrane-type protein [Medicago truncatula])

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05
Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 0

Query: 1   MVTVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALI 40
           ++TVAVTIVVVA+PEGLPLAVTLTLAYS RKMMA KAL+
Sbjct: 444 IITVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALV 482

BLAST of CsGy1G025420 vs. NCBI nr
Match: XP_003595105.2 (calcium-transporting ATPase 8, plasma membrane-type isoform X2 [Medicago truncatula] >AES65356.2 calcium-transporting ATPase 8, plasma membrane-type protein [Medicago truncatula])

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05
Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 0

Query: 1   MVTVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALI 40
           ++TVAVTIVVVA+PEGLPLAVTLTLAYS RKMMA KAL+
Sbjct: 444 IITVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALV 482

BLAST of CsGy1G025420 vs. TAIR10
Match: AT4G29900.1 (autoinhibited Ca(2+)-ATPase 10)

HSP 1 Score: 58.5 bits (140), Expect = 3.3e-09
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 0

Query: 3   TVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALI 40
           TVAVTIVVVA+PEGLPLAVTLTLAYS RKMMA KAL+
Sbjct: 428 TVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALV 464

BLAST of CsGy1G025420 vs. TAIR10
Match: AT5G57110.1 (autoinhibited Ca2+ -ATPase, isoform 8)

HSP 1 Score: 58.5 bits (140), Expect = 3.3e-09
Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 0

Query: 1   MVTVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALI 40
           ++TVAVTIVVVA+PEGLPLAVTLTLAYS RKMMA KAL+
Sbjct: 426 VLTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALV 464

BLAST of CsGy1G025420 vs. TAIR10
Match: AT3G21180.1 (autoinhibited Ca(2+)-ATPase 9)

HSP 1 Score: 58.2 bits (139), Expect = 4.4e-09
Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = 0

Query: 3   TVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALI 40
           T+AVTIVVVA+PEGLPLAVTLTLAYS RKMMA KAL+
Sbjct: 441 TIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALV 477

BLAST of CsGy1G025420 vs. TAIR10
Match: AT3G22910.1 (ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein)

HSP 1 Score: 50.8 bits (120), Expect = 7.0e-07
Identity = 28/39 (71.79%), Postives = 33/39 (84.62%), Query Frame = 0

Query: 1   MVTVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALI 40
           MV  AVTI+VVAIPEGLPLAVTLTLAYS ++MM   A++
Sbjct: 393 MVAAAVTIIVVAIPEGLPLAVTLTLAYSMKRMMKDNAMV 431

BLAST of CsGy1G025420 vs. TAIR10
Match: AT1G27770.1 (autoinhibited Ca2+-ATPase 1)

HSP 1 Score: 49.3 bits (116), Expect = 2.0e-06
Identity = 27/36 (75.00%), Postives = 33/36 (91.67%), Query Frame = 0

Query: 4   VAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALI 40
           VAVTIVVVA+PEGLPLAVTL+LA++ +KMM  KAL+
Sbjct: 403 VAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALV 438

BLAST of CsGy1G025420 vs. Swiss-Prot
Match: sp|Q9SZR1|ACA10_ARATH (Calcium-transporting ATPase 10, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=ACA10 PE=1 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 6.0e-08
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 0

Query: 3   TVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALI 40
           TVAVTIVVVA+PEGLPLAVTLTLAYS RKMMA KAL+
Sbjct: 428 TVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALV 464

BLAST of CsGy1G025420 vs. Swiss-Prot
Match: sp|Q9LF79|ACA8_ARATH (Calcium-transporting ATPase 8, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=ACA8 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.0e-08
Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 0

Query: 1   MVTVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALI 40
           ++TVAVTIVVVA+PEGLPLAVTLTLAYS RKMMA KAL+
Sbjct: 426 VLTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALV 464

BLAST of CsGy1G025420 vs. Swiss-Prot
Match: sp|Q9LU41|ACA9_ARATH (Calcium-transporting ATPase 9, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=ACA9 PE=2 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 7.9e-08
Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = 0

Query: 3   TVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALI 40
           T+AVTIVVVA+PEGLPLAVTLTLAYS RKMMA KAL+
Sbjct: 441 TIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALV 477

BLAST of CsGy1G025420 vs. Swiss-Prot
Match: sp|Q7X8B5|ACA5_ORYSJ (Calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica OX=39947 GN=ACA5 PE=1 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 6.7e-07
Identity = 31/37 (83.78%), Postives = 34/37 (91.89%), Query Frame = 0

Query: 3   TVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALI 40
           TVAVTIVVVA+PEGLPLAVTLTLA+S RKMM  KAL+
Sbjct: 432 TVAVTIVVVAVPEGLPLAVTLTLAFSMRKMMRDKALV 468

BLAST of CsGy1G025420 vs. Swiss-Prot
Match: sp|Q9LIK7|ACA13_ARATH (Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=ACA13 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.3e-05
Identity = 28/39 (71.79%), Postives = 33/39 (84.62%), Query Frame = 0

Query: 1   MVTVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALI 40
           MV  AVTI+VVAIPEGLPLAVTLTLAYS ++MM   A++
Sbjct: 393 MVAAAVTIIVVAIPEGLPLAVTLTLAYSMKRMMKDNAMV 431

BLAST of CsGy1G025420 vs. TrEMBL
Match: tr|A0A0A0LWC0|A0A0A0LWC0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569110 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.0e-08
Identity = 38/41 (92.68%), Postives = 41/41 (100.00%), Query Frame = 0

Query: 1   MVTVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALIIQ 42
           MVTVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKAL+++
Sbjct: 375 MVTVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALVLR 415

BLAST of CsGy1G025420 vs. TrEMBL
Match: tr|A0A1S3EGF3|A0A1S3EGF3_CICAR (Calcium-transporting ATPase OS=Cicer arietinum OX=3827 GN=LOC101492361 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.2e-06
Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 0

Query: 1   MVTVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALI 40
           ++TVAVTIVVVA+PEGLPLAVTLTLAYS RKMMA KAL+
Sbjct: 440 IITVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALV 478

BLAST of CsGy1G025420 vs. TrEMBL
Match: tr|A0A0R0G1Y0|A0A0R0G1Y0_SOYBN (Calcium-transporting ATPase OS=Glycine max OX=3847 GN=100792945 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.2e-06
Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 0

Query: 1   MVTVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALI 40
           ++TVAVTIVVVA+PEGLPLAVTLTLAYS RKMMA KAL+
Sbjct: 433 IITVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALV 471

BLAST of CsGy1G025420 vs. TrEMBL
Match: tr|K7LC34|K7LC34_SOYBN (Calcium-transporting ATPase OS=Glycine max OX=3847 GN=100820121 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.2e-06
Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 0

Query: 1   MVTVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALI 40
           ++TVAVTIVVVA+PEGLPLAVTLTLAYS RKMMA KAL+
Sbjct: 436 IITVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALV 474

BLAST of CsGy1G025420 vs. TrEMBL
Match: tr|G7IGB8|G7IGB8_MEDTR (Calcium-transporting ATPase OS=Medicago truncatula OX=3880 GN=11443235 PE=3 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 7.2e-06
Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 0

Query: 1   MVTVAVTIVVVAIPEGLPLAVTLTLAYSTRKMMAGKALI 40
           ++TVAVTIVVVA+PEGLPLAVTLTLAYS RKMMA KAL+
Sbjct: 444 IITVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALV 482

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN66033.13.0e-0892.68hypothetical protein Csa_1G569110 [Cucumis sativus][more]
XP_010928700.18.3e-0684.62PREDICTED: calcium-transporting ATPase 8, plasma membrane-type-like [Elaeis guin... [more]
XP_004488018.11.1e-0584.62PREDICTED: calcium-transporting ATPase 8, plasma membrane-type isoform X1 [Cicer... [more]
XP_003595106.21.1e-0584.62calcium-transporting ATPase 8, plasma membrane-type isoform X1 [Medicago truncat... [more]
XP_003595105.21.1e-0584.62calcium-transporting ATPase 8, plasma membrane-type isoform X2 [Medicago truncat... [more]
Match NameE-valueIdentityDescription
AT4G29900.13.3e-0989.19autoinhibited Ca(2+)-ATPase 10[more]
AT5G57110.13.3e-0984.62autoinhibited Ca2+ -ATPase, isoform 8[more]
AT3G21180.14.4e-0986.49autoinhibited Ca(2+)-ATPase 9[more]
AT3G22910.17.0e-0771.79ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family p... [more]
AT1G27770.12.0e-0675.00autoinhibited Ca2+-ATPase 1[more]
Match NameE-valueIdentityDescription
sp|Q9SZR1|ACA10_ARATH6.0e-0889.19Calcium-transporting ATPase 10, plasma membrane-type OS=Arabidopsis thaliana OX=... [more]
sp|Q9LF79|ACA8_ARATH6.0e-0884.62Calcium-transporting ATPase 8, plasma membrane-type OS=Arabidopsis thaliana OX=3... [more]
sp|Q9LU41|ACA9_ARATH7.9e-0886.49Calcium-transporting ATPase 9, plasma membrane-type OS=Arabidopsis thaliana OX=3... [more]
sp|Q7X8B5|ACA5_ORYSJ6.7e-0783.78Calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japon... [more]
sp|Q9LIK7|ACA13_ARATH1.3e-0571.79Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis tha... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LWC0|A0A0A0LWC0_CUCSA2.0e-0892.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569110 PE=4 SV=1[more]
tr|A0A1S3EGF3|A0A1S3EGF3_CICAR7.2e-0684.62Calcium-transporting ATPase OS=Cicer arietinum OX=3827 GN=LOC101492361 PE=3 SV=1[more]
tr|A0A0R0G1Y0|A0A0R0G1Y0_SOYBN7.2e-0684.62Calcium-transporting ATPase OS=Glycine max OX=3847 GN=100792945 PE=3 SV=1[more]
tr|K7LC34|K7LC34_SOYBN7.2e-0684.62Calcium-transporting ATPase OS=Glycine max OX=3847 GN=100820121 PE=3 SV=1[more]
tr|G7IGB8|G7IGB8_MEDTR7.2e-0684.62Calcium-transporting ATPase OS=Medicago truncatula OX=3880 GN=11443235 PE=3 SV=2[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023298ATPase_P-typ_TM_dom_sf
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005516 calmodulin binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G025420.1CsGy1G025420.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.20.1110.10coord: 1..44
e-value: 7.1E-14
score: 53.4
NoneNo IPR availablePANTHERPTHR24093CATION TRANSPORTING ATPASEcoord: 2..40
NoneNo IPR availablePANTHERPTHR24093:SF416CALCIUM-TRANSPORTING ATPASE 9, PLASMA MEMBRANE-TYPEcoord: 2..40
IPR023298P-type ATPase, transmembrane domain superfamilySUPERFAMILYSSF81665Calcium ATPase, transmembrane domain Mcoord: 1..43

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None