CsGy1G024280 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G024280
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Tubulin beta-7 chain
Location	Chr1 : 23142753 .. 23143388 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGGTGTTACTTGTTGTCTAAGATTCCCTGGACAATTGAACTCCGATCTACGAAAGCTTGCTGTTAATCTCATTCCATTCCCGCGTTTGCATTTCTTTATGGTTGGTTTTGCACCATTAACATCAAGAGGATCTCAACAATACCGAGCCCTTACAGTGCCAGAGTTAACCCAGCAGATGTGGGATGCCAAAAACATGATGTGTGCTGCTGATCCACGACATGGTCGGTACCTTACTGCTTCAGCCATGTTTCGTGGTAAGATGAGCACTAAAGAAGTAGACGAGCAGATGATTAATGTACAAAACAAAAACTCATCTTACTTTGTCGAATGGATACCTAACAACGTGAAGTCTAGCGTATGTGACATCCCACCCAAGGGTCTGAAAATGGCATCAACTTTCATCGGTAACTCGACATCAATTCAAGAGATGTTCAGGAGGGTTAGCGAGCAGTTCACAGCCATGTTCAGGCGCAAGGCCTTCTTGCATTGGTACACAGGTGAAGGAATGGATGAAATGGAGTTCACCGAGGCTGAGAGTAACATGAACGATCTGGTTGCCGAGTATCAGCAGTACCAGGATGCGACTGCAGATGAAGAGTATGAAGATGAAGAAGAGGAAATCCCTGCTTGA

mRNA sequence

ATGAGCGGTGTTACTTGTTGTCTAAGATTCCCTGGACAATTGAACTCCGATCTACGAAAGCTTGCTGTTAATCTCATTCCATTCCCGCGTTTGCATTTCTTTATGGTTGGTTTTGCACCATTAACATCAAGAGGATCTCAACAATACCGAGCCCTTACAGTGCCAGAGTTAACCCAGCAGATGTGGGATGCCAAAAACATGATGTGTGCTGCTGATCCACGACATGGTCGGTACCTTACTGCTTCAGCCATGTTTCGTGGTAAGATGAGCACTAAAGAAGTAGACGAGCAGATGATTAATGTACAAAACAAAAACTCATCTTACTTTGTCGAATGGATACCTAACAACGTGAAGTCTAGCGTATGTGACATCCCACCCAAGGGTCTGAAAATGGCATCAACTTTCATCGGTAACTCGACATCAATTCAAGAGATGTTCAGGAGGGTTAGCGAGCAGTTCACAGCCATGTTCAGGCGCAAGGCCTTCTTGCATTGGTACACAGGTGAAGGAATGGATGAAATGGAGTTCACCGAGGCTGAGAGTAACATGAACGATCTGGTTGCCGAGTATCAGCAGTACCAGGATGCGACTGCAGATGAAGAGTATGAAGATGAAGAAGAGGAAATCCCTGCTTGA

Coding sequence (CDS)

ATGAGCGGTGTTACTTGTTGTCTAAGATTCCCTGGACAATTGAACTCCGATCTACGAAAGCTTGCTGTTAATCTCATTCCATTCCCGCGTTTGCATTTCTTTATGGTTGGTTTTGCACCATTAACATCAAGAGGATCTCAACAATACCGAGCCCTTACAGTGCCAGAGTTAACCCAGCAGATGTGGGATGCCAAAAACATGATGTGTGCTGCTGATCCACGACATGGTCGGTACCTTACTGCTTCAGCCATGTTTCGTGGTAAGATGAGCACTAAAGAAGTAGACGAGCAGATGATTAATGTACAAAACAAAAACTCATCTTACTTTGTCGAATGGATACCTAACAACGTGAAGTCTAGCGTATGTGACATCCCACCCAAGGGTCTGAAAATGGCATCAACTTTCATCGGTAACTCGACATCAATTCAAGAGATGTTCAGGAGGGTTAGCGAGCAGTTCACAGCCATGTTCAGGCGCAAGGCCTTCTTGCATTGGTACACAGGTGAAGGAATGGATGAAATGGAGTTCACCGAGGCTGAGAGTAACATGAACGATCTGGTTGCCGAGTATCAGCAGTACCAGGATGCGACTGCAGATGAAGAGTATGAAGATGAAGAAGAGGAAATCCCTGCTTGA

Protein sequence

MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEYEDEEEEIPA

Homology

[Close]

BLAST of CsGy1G024280 vs. NCBI nr
Match: XP_004135544.1 (PREDICTED: tubulin beta chain [Cucumis sativus] >KGN65908.1 hypothetical protein Csa_1G537560 [Cucumis sativus])

HSP 1 Score: 427.6 bits (1098), Expect = 2.5e-116
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYEDEEEEIPA 212
           SNMNDLVAEYQQYQDATADEEYEDEEEEIPA
Sbjct: 413 SNMNDLVAEYQQYQDATADEEYEDEEEEIPA 443

[Close]

BLAST of CsGy1G024280 vs. NCBI nr
Match: XP_022140098.1 (tubulin beta chain [Momordica charantia])

HSP 1 Score: 426.4 bits (1095), Expect = 5.6e-116
Identity = 210/211 (99.53%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYEDEEEEIPA 212
           SNMNDLVAEYQQYQDATADEEYEDE+EEIPA
Sbjct: 413 SNMNDLVAEYQQYQDATADEEYEDEDEEIPA 443

[Close]

BLAST of CsGy1G024280 vs. NCBI nr
Match: XP_008445559.1 (PREDICTED: tubulin beta chain [Cucumis melo])

HSP 1 Score: 426.0 bits (1094), Expect = 7.4e-116
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYEDEEEEIP 211
           SNMNDLVAEYQQYQDATADEEYEDEEEEIP
Sbjct: 413 SNMNDLVAEYQQYQDATADEEYEDEEEEIP 442

[Close]

BLAST of CsGy1G024280 vs. NCBI nr
Match: XP_022954422.1 (tubulin beta chain [Cucurbita moschata] >XP_022994808.1 tubulin beta chain [Cucurbita maxima] >XP_023541689.1 tubulin beta chain [Cucurbita pepo subsp. pepo])

HSP 1 Score: 426.0 bits (1094), Expect = 7.4e-116
Identity = 210/211 (99.53%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYEDEEEEIPA 212
           SNMNDLVAEYQQYQDATA+EEYEDEEEEIPA
Sbjct: 413 SNMNDLVAEYQQYQDATAEEEYEDEEEEIPA 443

[Close]

BLAST of CsGy1G024280 vs. NCBI nr
Match: XP_022927173.1 (tubulin beta chain-like [Cucurbita moschata] >XP_022927174.1 tubulin beta chain-like [Cucurbita moschata] >XP_022927175.1 tubulin beta chain-like [Cucurbita moschata] >XP_023001031.1 tubulin beta chain-like [Cucurbita maxima] >XP_023001032.1 tubulin beta chain-like [Cucurbita maxima] >XP_023001033.1 tubulin beta chain-like [Cucurbita maxima] >XP_023519016.1 tubulin beta chain-like [Cucurbita pepo subsp. pepo] >XP_023519017.1 tubulin beta chain-like [Cucurbita pepo subsp. pepo] >XP_023519018.1 tubulin beta chain-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 419.9 bits (1078), Expect = 5.3e-114
Identity = 207/211 (98.10%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR+LTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYEDEEEEIPA 212
           SNMNDLVAEYQQYQDATADEE+E EEEE PA
Sbjct: 413 SNMNDLVAEYQQYQDATADEEFEAEEEEAPA 443

[Close]

BLAST of CsGy1G024280 vs. TAIR10
Match: AT5G23860.1 (tubulin beta 8)

HSP 1 Score: 406.0 bits (1042), Expect = 1.4e-113
Identity = 198/201 (98.51%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKST 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPP GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEE 202
           SNMNDLV+EYQQYQDATADEE
Sbjct: 413 SNMNDLVSEYQQYQDATADEE 433

[Close]

BLAST of CsGy1G024280 vs. TAIR10
Match: AT2G29550.1 (tubulin beta-7 chain)

HSP 1 Score: 402.9 bits (1034), Expect = 1.2e-112
Identity = 197/203 (97.04%), Postives = 200/203 (98.52%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR LTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKST 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPP GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYE 204
           SNMNDLV+EYQQYQDATADEE E
Sbjct: 413 SNMNDLVSEYQQYQDATADEEGE 435

[Close]

BLAST of CsGy1G024280 vs. TAIR10
Match: AT5G62690.1 (tubulin beta chain 2)

HSP 1 Score: 402.9 bits (1034), Expect = 1.2e-112
Identity = 195/201 (97.01%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR+LTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWD+KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+
Sbjct: 293 MWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKST 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPP GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEE 202
           SNMNDLV+EYQQYQDATADEE
Sbjct: 413 SNMNDLVSEYQQYQDATADEE 433

[Close]

BLAST of CsGy1G024280 vs. TAIR10
Match: AT5G62700.1 (tubulin beta chain 3)

HSP 1 Score: 402.9 bits (1034), Expect = 1.2e-112
Identity = 195/201 (97.01%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR+LTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWD+KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+
Sbjct: 293 MWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKST 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPP GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEE 202
           SNMNDLV+EYQQYQDATADEE
Sbjct: 413 SNMNDLVSEYQQYQDATADEE 433

[Close]

BLAST of CsGy1G024280 vs. TAIR10
Match: AT5G12250.1 (beta-6 tubulin)

HSP 1 Score: 401.0 bits (1029), Expect = 4.6e-112
Identity = 195/201 (97.01%), Postives = 199/201 (99.00%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWD+KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDI P+GL MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIAPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEE 202
           SNMNDLV+EYQQYQDATAD+E
Sbjct: 413 SNMNDLVSEYQQYQDATADDE 433

[Close]

BLAST of CsGy1G024280 vs. Swiss-Prot
Match: sp|Q43594|TBB1_ORYSJ (Tubulin beta-1 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB1 PE=2 SV=2)

HSP 1 Score: 415.2 bits (1066), Expect = 4.3e-115
Identity = 205/212 (96.70%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPP+GL MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEE--YEDEEEEIP 211
           SNMNDLV+EYQQYQDATADEE  YEDEEE++P
Sbjct: 413 SNMNDLVSEYQQYQDATADEEGDYEDEEEQVP 444

[Close]

BLAST of CsGy1G024280 vs. Swiss-Prot
Match: sp|P25862|TBB1_AVESA (Tubulin beta-1 chain (Fragment) OS=Avena sativa OX=4498 GN=TUBB1 PE=2 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 8.0e-114
Identity = 204/213 (95.77%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 171 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 230

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWD+KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 231 MWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 290

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPP GL MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 291 VCDIPPTGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 350

Query: 181 SNMNDLVAEYQQYQDATADE--EYEDEEEEIPA 212
           SNMNDLV+EYQQYQDATADE  EYEDEEE++ A
Sbjct: 351 SNMNDLVSEYQQYQDATADEEGEYEDEEEDLQA 383

[Close]

BLAST of CsGy1G024280 vs. Swiss-Prot
Match: sp|Q41783|TBB6_MAIZE (Tubulin beta-6 chain OS=Zea mays OX=4577 GN=TUBB6 PE=2 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 8.0e-114
Identity = 204/208 (98.08%), Postives = 206/208 (99.04%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPP+GL MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATAD-EEYEDEEE 208
           SNMNDLV+EYQQYQDATAD EEYEDEEE
Sbjct: 413 SNMNDLVSEYQQYQDATADEEEYEDEEE 440

[Close]

BLAST of CsGy1G024280 vs. Swiss-Prot
Match: sp|P37392|TBB1_LUPAL (Tubulin beta-1 chain OS=Lupinus albus OX=3870 GN=TUBB1 PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 1.8e-113
Identity = 204/210 (97.14%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKST 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPP GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADE---EYEDEEE 208
           SNMNDLV+EYQQYQDATADE   EYEDEEE
Sbjct: 413 SNMNDLVSEYQQYQDATADEDGYEYEDEEE 442

[Close]

BLAST of CsGy1G024280 vs. Swiss-Prot
Match: sp|Q40106|TBB2_LUPAL (Tubulin beta-2 chain OS=Lupinus albus OX=3870 GN=TUBB2 PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 1.8e-113
Identity = 204/210 (97.14%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKST 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPP GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADE---EYEDEEE 208
           SNMNDLV+EYQQYQDATADE   EYEDEEE
Sbjct: 413 SNMNDLVSEYQQYQDATADEDGYEYEDEEE 442

[Close]

BLAST of CsGy1G024280 vs. TrEMBL
Match: tr|A0A0A0LVT8|A0A0A0LVT8_CUCSA (Tubulin beta chain OS=Cucumis sativus OX=3659 GN=Csa_1G537560 PE=3 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 1.7e-116
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYEDEEEEIPA 212
           SNMNDLVAEYQQYQDATADEEYEDEEEEIPA
Sbjct: 413 SNMNDLVAEYQQYQDATADEEYEDEEEEIPA 443

[Close]

BLAST of CsGy1G024280 vs. TrEMBL
Match: tr|A0A1S3BCJ0|A0A1S3BCJ0_CUCME (Tubulin beta chain OS=Cucumis melo OX=3656 GN=LOC103488535 PE=3 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 4.9e-116
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYEDEEEEIP 211
           SNMNDLVAEYQQYQDATADEEYEDEEEEIP
Sbjct: 413 SNMNDLVAEYQQYQDATADEEYEDEEEEIP 442

[Close]

BLAST of CsGy1G024280 vs. TrEMBL
Match: tr|A0A067JIS1|A0A067JIS1_JATCU (Tubulin beta chain OS=Jatropha curcas OX=180498 GN=JCGZ_27135 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 7.8e-114
Identity = 208/211 (98.58%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATA-DEEYEDEEEEIP 211
           SNMNDLVAEYQQYQDATA DEEYE+E+EEIP
Sbjct: 413 SNMNDLVAEYQQYQDATADDEEYEEEDEEIP 443

[Close]

BLAST of CsGy1G024280 vs. TrEMBL
Match: tr|A0A2C9UL58|A0A2C9UL58_MANES (Tubulin beta chain OS=Manihot esculenta OX=3983 GN=MANES_14G124600 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 7.8e-114
Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATA-DEEYEDEEEEI 210
           SNMNDLVAEYQQYQDATA DEEYEDEEEEI
Sbjct: 413 SNMNDLVAEYQQYQDATADDEEYEDEEEEI 442

[Close]

BLAST of CsGy1G024280 vs. TrEMBL
Match: tr|J3LTD7|J3LTD7_ORYBR (Tubulin beta chain OS=Oryza brachyantha OX=4533 GN=102720311 PE=3 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 1.0e-113
Identity = 205/211 (97.16%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 60
           MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292

Query: 61  MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 120
           MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSS
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSS 352

Query: 121 VCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 180
           VCDIPP+GLKMA+TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE
Sbjct: 353 VCDIPPRGLKMAATFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412

Query: 181 SNMNDLVAEYQQYQDATADEEYEDEEEEIPA 212
           SNMNDLVAEYQQYQDATADEEYEDEE E+ A
Sbjct: 413 SNMNDLVAEYQQYQDATADEEYEDEEGEVEA 443

The following BLAST results are available for this feature:

BLAST of CsGy1G024280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135544.1	2.5e-116	100.00	PREDICTED: tubulin beta chain [Cucumis sativus] >KGN65908.1 hypothetical protein...	[more]
XP_022140098.1	5.6e-116	99.53	tubulin beta chain [Momordica charantia]	[more]
XP_008445559.1	7.4e-116	100.00	PREDICTED: tubulin beta chain [Cucumis melo]	[more]
XP_022954422.1	7.4e-116	99.53	tubulin beta chain [Cucurbita moschata] >XP_022994808.1 tubulin beta chain [Cucu...	[more]
XP_022927173.1	5.3e-114	98.10	tubulin beta chain-like [Cucurbita moschata] >XP_022927174.1 tubulin beta chain-...	[more]

BLAST of CsGy1G024280 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23860.1	1.4e-113	98.51	tubulin beta 8	[more]
AT2G29550.1	1.2e-112	97.04	tubulin beta-7 chain	[more]
AT5G62690.1	1.2e-112	97.01	tubulin beta chain 2	[more]
AT5G62700.1	1.2e-112	97.01	tubulin beta chain 3	[more]
AT5G12250.1	4.6e-112	97.01	beta-6 tubulin	[more]

BLAST of CsGy1G024280 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q43594\|TBB1_ORYSJ	4.3e-115	96.70	Tubulin beta-1 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB1 PE=2 SV=2	[more]
sp\|P25862\|TBB1_AVESA	8.0e-114	95.77	Tubulin beta-1 chain (Fragment) OS=Avena sativa OX=4498 GN=TUBB1 PE=2 SV=1	[more]
sp\|Q41783\|TBB6_MAIZE	8.0e-114	98.08	Tubulin beta-6 chain OS=Zea mays OX=4577 GN=TUBB6 PE=2 SV=1	[more]
sp\|P37392\|TBB1_LUPAL	1.8e-113	97.14	Tubulin beta-1 chain OS=Lupinus albus OX=3870 GN=TUBB1 PE=3 SV=1	[more]
sp\|Q40106\|TBB2_LUPAL	1.8e-113	97.14	Tubulin beta-2 chain OS=Lupinus albus OX=3870 GN=TUBB2 PE=3 SV=1	[more]

BLAST of CsGy1G024280 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LVT8\|A0A0A0LVT8_CUCSA	1.7e-116	100.00	Tubulin beta chain OS=Cucumis sativus OX=3659 GN=Csa_1G537560 PE=3 SV=1	[more]
tr\|A0A1S3BCJ0\|A0A1S3BCJ0_CUCME	4.9e-116	100.00	Tubulin beta chain OS=Cucumis melo OX=3656 GN=LOC103488535 PE=3 SV=1	[more]
tr\|A0A067JIS1\|A0A067JIS1_JATCU	7.8e-114	98.58	Tubulin beta chain OS=Jatropha curcas OX=180498 GN=JCGZ_27135 PE=3 SV=1	[more]
tr\|A0A2C9UL58\|A0A2C9UL58_MANES	7.8e-114	99.52	Tubulin beta chain OS=Manihot esculenta OX=3983 GN=MANES_14G124600 PE=3 SV=1	[more]
tr\|J3LTD7\|J3LTD7_ORYBR	1.0e-113	97.16	Tubulin beta chain OS=Oryza brachyantha OX=4533 GN=102720311 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0007017	microtubule-based process

Vocabulary: **Cellular Component**
Term	Definition
GO:0005874	microtubule

Vocabulary: **Molecular Function**
Term	Definition
GO:0005200	structural constituent of cytoskeleton
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR008280	Tub_FtsZ_C
IPR000217	Tubulin
IPR037103	Tubulin/FtsZ_C_sf
IPR023123	Tubulin_C
IPR036525	Tubulin/FtsZ_GTPase_sf
IPR018316	Tubulin/FtsZ_2-layer-sand-dom
IPR002453	Beta_tubulin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005874	microtubule
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005200	structural constituent of cytoskeleton

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G024280.1	CsGy1G024280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 176..196
None	No IPR available	CDD	cd02187	beta_tubulin	coord: 1..194 e-value: 1.13897E-151 score: 430.064
IPR002453	Beta tubulin	PRINTS	PR01163	BETATUBULIN	coord: 145..156 score: 79.05 coord: 115..138 score: 79.4 coord: 13..26 score: 88.61 coord: 79..97 score: 80.51 coord: 97..111 score: 87.09 coord: 33..49 score: 86.49 coord: 180..198 score: 89.35
IPR002453	Beta tubulin	PANTHER	PTHR11588:SF256	SUBFAMILY NOT NAMED	coord: 1..209
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	SMART	SM00865	Tubulin_C_4	coord: 14..151 e-value: 5.0E-42 score: 155.6
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	PFAM	PF03953	Tubulin_C	coord: 29..149 e-value: 5.7E-41 score: 139.6
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	GENE3D	G3DSA:3.40.50.1440		coord: 1..30 e-value: 5.0E-8 score: 34.6
IPR023123	Tubulin, C-terminal	GENE3D	G3DSA:1.10.287.600		coord: 142..209 e-value: 6.9E-35 score: 120.8
IPR037103	Tubulin/FtsZ, C-terminal domain superfamily	GENE3D	G3DSA:3.30.1330.20		coord: 31..141 e-value: 2.0E-54 score: 184.4
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 1..209
IPR008280	Tubulin/FtsZ, C-terminal	SUPERFAMILY	SSF55307	Tubulin C-terminal domain-like	coord: 12..197

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G024280	Lsi02G009580	Bottle gourd (USVL1VR-Ls)	cgyblsiB031

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G024280	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G024280	Silver-seed gourd	carcgybB0405
CsGy1G024280	Silver-seed gourd	carcgybB0429
CsGy1G024280	Silver-seed gourd	carcgybB0430
CsGy1G024280	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G024280	Cucumber (Chinese Long) v3	cgybcucB049
CsGy1G024280	Watermelon (97103) v2	cgybwmbB014
CsGy1G024280	Watermelon (97103) v2	cgybwmbB049
CsGy1G024280	Watermelon (97103) v2	cgybwmbB045
CsGy1G024280	Wax gourd	cgybwgoB022
CsGy1G024280	Wax gourd	cgybwgoB037
CsGy1G024280	Cucurbita maxima (Rimu)	cgybcmaB067
CsGy1G024280	Cucurbita maxima (Rimu)	cgybcmaB076
CsGy1G024280	Cucurbita maxima (Rimu)	cgybcmaB087
CsGy1G024280	Cucurbita maxima (Rimu)	cgybcmaB100
CsGy1G024280	Cucurbita moschata (Rifu)	cgybcmoB063
CsGy1G024280	Cucurbita moschata (Rifu)	cgybcmoB070
CsGy1G024280	Cucurbita moschata (Rifu)	cgybcmoB083
CsGy1G024280	Cucurbita moschata (Rifu)	cgybcmoB094
CsGy1G024280	Cucurbita pepo (Zucchini)	cgybcpeB011
CsGy1G024280	Cucurbita pepo (Zucchini)	cgybcpeB019
CsGy1G024280	Cucurbita pepo (Zucchini)	cgybcpeB072
CsGy1G024280	Cucurbita pepo (Zucchini)	cgybcpeB086
CsGy1G024280	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G024280	Bottle gourd (USVL1VR-Ls)	cgyblsiB019
CsGy1G024280	Melon (DHL92) v3.5.1	cgybmeB013
CsGy1G024280	Melon (DHL92) v3.6.1	cgybmedB012
CsGy1G024280	Melon (DHL92) v3.6.1	cgybmedB071
CsGy1G024280	Watermelon (Charleston Gray)	cgybwcgB046
CsGy1G024280	Watermelon (97103) v1	cgybwmB027