CsGy1G024270 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G024270
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Tubulin beta-3 chain
Location	Chr1 : 23139947 .. 23142061 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCCTCTCAGTTTCATTATTCTATTGGTTCGATAAGAAATCCAATTCTCCCTATTTTCCCGCTGTAGATCTCGTCGATTTTCCGTTTGTTTCCCGGGAAGATCAACCGAAGATGAGAGAAATCCTTCACATCCAAGGCGGCCAATGCGGCAACCAGATCGGAGCCAAGTTCTGGGAGGTCATTTGCGATGAACATGGCATTGATCACACCGGAAAGTACAGCGGTGACTCTGAGCTTCAGCTTGAACGGATTAACGTCTATTACAATGAAGCCAGTGGCGGTAGGTATGTTCCTCGTGCTGTTCTTATGGATCTTGAGCCTGGAACCATGGATTCCGTCAGATCCGGACCCTATGGACAGATCTTCCGTCCCGATAACTTCGTTTTTGGTCAGTCTGGGGCTGGGAATAATTGGGCTAAGGGGCATTATACTGAAGGAGCTGAGCTTATTGATTCTGTTCTAGACGTTGTCAGGAAGGAGGCTGAGAATTGTGATTGCTTGCAAGGTAATTTCGTTTTTTAAATTTTTAAAAAACTGTTGGTCTTGGAATTATGATTTCGCGCGCAATTTTCTTACTTGTTTCATTTTGTGGATTTCAGTACGGTGAATTGTTCTTCTAGATCTTGCACCGAATTGTGGAGTTGTTGAATTTTATTCCTTTCTCTTCGTATCATATCTATTAGCTTCTTTTATAGCCTTTGGTGTTTGGGGTTTTGTTTTCAATAATCATTTCTCTAGTGAGCTTGCCTCTCAAAGTTGGAGAAATGGTTCAATTTTGCAAATATTTTCTCTAGTAGTCTGCGTGCGCTTAGTTGATTTTTTGATATCATGGATTAGTATATATTTCCTCTGTTTCTCATACCCGCGGAATTTGTGAAAGCATGGTTTTAACTTTGTTCAGATCTGAACATACGGAAAAGACTATCAGGATCGGATAATCTTCCTATATTTTCATCCTCTTCAGAATTTGTAATTCCATAAAGTTGTTTTTATGAACTTTGATCTCGTATCTTTCTTTTAATATATACACGTTTCAGTTTGTGCCATTAACTCTGCTCTAATTAAGTAAAACCTAATGCATGTACCGTTTGGAGTAAGTTATCTATCATTTCTCAATATGAGAATTCACTATGTCGATAAATGATCAATCTTTTCGTTTAAATACCTTTTTCAAACGAGCACGTATCCCTCATATTCCCGGTTTTTGTATTTTAATATTAGTTTTGAAGTGCCAAATTACAATATATTTTAAATAATGTAATTTTTTATTATATTCTACATTTGGTATAGTGGTTGTGCTTTTTTAAAATCTCAAGGTCTTGGGTTCAAATCCTATCTATTGCAGTTTTTTATCTTCTTTTTTTTGTTAATTGTGCTCCCCATCATTGGATACTCCACTGAATTTAAACTTTTTTTTTTTTTTTTGTGTGTAGAAAATCCAATAATATTGTGCTAATTCATTCAAAGCATAGGTTTATAGTTCGATTCTTCTTATATTTGGCCATTCTTTCCAAATCTTCGATGTGTCATCTCTCTGTTATCACCTTTTATAATTGTTAGATATTGATTCAAACATGTAGATGCACTCTAATAATCACTAGACATAAATTTGAGATATTTATCTTTCATATATTCTAACATTAAAAAAATATGTGGTCAGTTTGTGTGGCAGTCTTATCAATTAATTTATCATGCATGCATGCACACAGAGGTCTCTGAAAATGGCTCACTACTTTTTGCTGATTCTTTGTACAGGATTTCAAGTTTGTCATTCTTTGGGTGGAGGTACTGGATCTGGAATGGGAACACTTCTAATTTCAAAGATCAGGGAGGAGTACCCAGATCGCATGATGTTGACATTTTCTGTATTTCCTTCTCCCAAGGTTTCAGACACAGTTGTAGAACCATACAATGCCACTTTGTCTGTTCATCAACTTGTTGAGAATGCTGATGAATGCATGGTTCTTGACAACGAAGCCCTTTACGATATTTGCTTCCGAACACTCAAGCTTGCTACTCCAACATGTAAGTTCCCAAGTTCTGTAACTCGTATTTGGGTCTTGAAATTTACCCTTGCACACTCATTATTGTCATTTAACAATCTGAAATTTTGA

mRNA sequence

ATCCCTCTCAGTTTCATTATTCTATTGGTTCGATAAGAAATCCAATTCTCCCTATTTTCCCGCTGTAGATCTCGTCGATTTTCCGTTTGTTTCCCGGGAAGATCAACCGAAGATGAGAGAAATCCTTCACATCCAAGGCGGCCAATGCGGCAACCAGATCGGAGCCAAGTTCTGGGAGGTCATTTGCGATGAACATGGCATTGATCACACCGGAAAGTACAGCGGTGACTCTGAGCTTCAGCTTGAACGGATTAACGTCTATTACAATGAAGCCAGTGGCGGTAGGTATGTTCCTCGTGCTGTTCTTATGGATCTTGAGCCTGGAACCATGGATTCCGTCAGATCCGGACCCTATGGACAGATCTTCCGTCCCGATAACTTCGTTTTTGGTCAGTCTGGGGCTGGGAATAATTGGGCTAAGGGGCATTATACTGAAGGAGCTGAGCTTATTGATTCTGTTCTAGACGTTGTCAGGAAGGAGGCTGAGAATTGTGATTGCTTGCAAGGATTTCAAGTTTGTCATTCTTTGGGTGGAGGTACTGGATCTGGAATGGGAACACTTCTAATTTCAAAGATCAGGGAGGAGTACCCAGATCGCATGATGTTGACATTTTCTGTATTTCCTTCTCCCAAGGTTTCAGACACAGTTGTAGAACCATACAATGCCACTTTGTCTGTTCATCAACTTGTTGAGAATGCTGATGAATGCATGGTTCTTGACAACGAAGCCCTTTACGATATTTGCTTCCGAACACTCAAGCTTGCTACTCCAACATGTAAGTTCCCAAGTTCTGTAACTCGTATTTGGGTCTTGAAATTTACCCTTGCACACTCATTATTGTCATTTAACAATCTGAAATTTTGA

Coding sequence (CDS)

ATGAGAGAAATCCTTCACATCCAAGGCGGCCAATGCGGCAACCAGATCGGAGCCAAGTTCTGGGAGGTCATTTGCGATGAACATGGCATTGATCACACCGGAAAGTACAGCGGTGACTCTGAGCTTCAGCTTGAACGGATTAACGTCTATTACAATGAAGCCAGTGGCGGTAGGTATGTTCCTCGTGCTGTTCTTATGGATCTTGAGCCTGGAACCATGGATTCCGTCAGATCCGGACCCTATGGACAGATCTTCCGTCCCGATAACTTCGTTTTTGGTCAGTCTGGGGCTGGGAATAATTGGGCTAAGGGGCATTATACTGAAGGAGCTGAGCTTATTGATTCTGTTCTAGACGTTGTCAGGAAGGAGGCTGAGAATTGTGATTGCTTGCAAGGATTTCAAGTTTGTCATTCTTTGGGTGGAGGTACTGGATCTGGAATGGGAACACTTCTAATTTCAAAGATCAGGGAGGAGTACCCAGATCGCATGATGTTGACATTTTCTGTATTTCCTTCTCCCAAGGTTTCAGACACAGTTGTAGAACCATACAATGCCACTTTGTCTGTTCATCAACTTGTTGAGAATGCTGATGAATGCATGGTTCTTGACAACGAAGCCCTTTACGATATTTGCTTCCGAACACTCAAGCTTGCTACTCCAACATGTAAGTTCCCAAGTTCTGTAACTCGTATTTGGGTCTTGAAATTTACCCTTGCACACTCATTATTGTCATTTAACAATCTGAAATTTTGA

Protein sequence

MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCKFPSSVTRIWVLKFTLAHSLLSFNNLKF

Homology

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BLAST of CsGy1G024270 vs. NCBI nr
Match: OEL34931.1 (Tubulin beta-7 chain [Dichanthelium oligosanthes])

HSP 1 Score: 478.4 bits (1230), Expect = 1.5e-131
Identity = 227/249 (91.16%), Postives = 238/249 (95.58%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 60
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKY+GDS+LQLERINVYYNEASGGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEASGGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCKFPSSVTRIWVLKFTLAH 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCKF   +  + V  F++  
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCKFALLLCSVLVPSFSIYC 240

Query: 241 SLLSFNNLK 250
           SL+S++ +K
Sbjct: 241 SLISYHGMK 249

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BLAST of CsGy1G024270 vs. NCBI nr
Match: GAY33913.1 (hypothetical protein CUMW_008750 [Citrus unshiu])

HSP 1 Score: 468.4 bits (1204), Expect = 1.5e-128
Identity = 221/223 (99.10%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 60
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDS+LQLERINVYYNEASGGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK 224
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK 223

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BLAST of CsGy1G024270 vs. NCBI nr
Match: PON50300.1 (beta-tubulin [Parasponia andersonii])

HSP 1 Score: 467.6 bits (1202), Expect = 2.6e-128
Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 60
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKY GDSELQLERINVYYNEASGGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYCGDSELQLERINVYYNEASGGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK 224
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK 223

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BLAST of CsGy1G024270 vs. NCBI nr
Match: OEL15710.1 (Tubulin beta-1 chain [Dichanthelium oligosanthes])

HSP 1 Score: 467.2 bits (1201), Expect = 3.4e-128
Identity = 220/223 (98.65%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 60
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKY+GDS+LQLERINVYYNEASGGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEASGGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK 224
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK 223

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BLAST of CsGy1G024270 vs. NCBI nr
Match: RDY01500.1 (Tubulin beta-3 chain [Mucuna pruriens])

HSP 1 Score: 467.2 bits (1201), Expect = 3.4e-128
Identity = 220/223 (98.65%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 60
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEA+GGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEATGGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK 224
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTC+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCR 223

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BLAST of CsGy1G024270 vs. TAIR10
Match: AT1G75780.1 (tubulin beta-1 chain)

HSP 1 Score: 447.6 bits (1150), Expect = 5.1e-126
Identity = 210/222 (94.59%), Postives = 220/222 (99.10%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDS-ELQLERINVYYNEASGGRY 60
           MREILH+QGGQCGNQIG+KFWEVICDEHG+D TG+Y+GDS +LQLERINVYYNEASGGRY
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60

Query: 61  VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 120
           VPRAVLMDLEPGTMDS+RSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDV
Sbjct: 61  VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120

Query: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
           VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180

Query: 181 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT 222
           VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TP+
Sbjct: 181 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPS 222

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BLAST of CsGy1G024270 vs. TAIR10
Match: AT1G20010.1 (tubulin beta-5 chain)

HSP 1 Score: 447.2 bits (1149), Expect = 6.6e-126
Identity = 211/222 (95.05%), Postives = 220/222 (99.10%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGD-SELQLERINVYYNEASGGRY 60
           MREILHIQGGQCGNQIG+KFWEVICDEHGID TG+YSGD ++LQLERINVYYNEASGGRY
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60

Query: 61  VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 120
           VPRAVLMDLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDV
Sbjct: 61  VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120

Query: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
           VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180

Query: 181 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT 222
           VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TP+
Sbjct: 181 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPS 222

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BLAST of CsGy1G024270 vs. TAIR10
Match: AT5G44340.1 (tubulin beta chain 4)

HSP 1 Score: 445.7 bits (1145), Expect = 1.9e-125
Identity = 210/221 (95.02%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 60
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTG+Y GDS LQLERI+VY+NEASGG+YV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60

Query: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAEN DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM+TFSVFPSPKVSDTVV
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLA PT
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPT 221

[Close]

BLAST of CsGy1G024270 vs. TAIR10
Match: AT5G12250.1 (beta-6 tubulin)

HSP 1 Score: 444.1 bits (1141), Expect = 5.6e-125
Identity = 207/221 (93.67%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 60
           MREILHIQGGQCGNQIG+KFWEV+CDEHGID TG+Y G+S+LQLER+NVYYNEAS GRYV
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRA+LMDLEPGTMDSVR+GPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

[Close]

BLAST of CsGy1G024270 vs. TAIR10
Match: AT5G62690.1 (tubulin beta chain 2)

HSP 1 Score: 443.7 bits (1140), Expect = 7.3e-125
Identity = 209/221 (94.57%), Postives = 216/221 (97.74%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 60
           MREILHIQGGQCGNQIGAKFWEV+C EHGID TG+Y+GDS+LQLERINVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDS+RSGPYGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221

[Close]

BLAST of CsGy1G024270 vs. Swiss-Prot
Match: sp|P28551|TBB3_SOYBN (Tubulin beta chain (Fragment) OS=Glycine max OX=3847 GN=TUBB PE=2 SV=2)

HSP 1 Score: 465.7 bits (1197), Expect = 3.3e-130
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 60
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT 221

[Close]

BLAST of CsGy1G024270 vs. Swiss-Prot
Match: sp|Q40665|TBB3_ORYSJ (Tubulin beta-3 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB3 PE=2 SV=2)

HSP 1 Score: 464.5 bits (1194), Expect = 7.2e-130
Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 60
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDS+LQLERINVYYNEASGGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT 221

[Close]

BLAST of CsGy1G024270 vs. Swiss-Prot
Match: sp|P46265|TBB5_ORYSJ (Tubulin beta-5 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB5 PE=1 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 6.1e-129
Identity = 218/221 (98.64%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 60
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDS+LQLERINVYYNEASGGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT 221

[Close]

BLAST of CsGy1G024270 vs. Swiss-Prot
Match: sp|Q9ZPP0|TBB1_ELEIN (Tubulin beta-1 chain OS=Eleusine indica OX=29674 GN=TUBB1 PE=2 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 1.4e-128
Identity = 217/221 (98.19%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 60
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKY+GDS+LQLERINVYYNEASGGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEASGGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT 221

[Close]

BLAST of CsGy1G024270 vs. Swiss-Prot
Match: sp|Q41784|TBB7_MAIZE (Tubulin beta-7 chain OS=Zea mays OX=4577 GN=TUBB7 PE=2 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 1.4e-128
Identity = 217/221 (98.19%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 60
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKY+GDS+LQLERINVYYNEASGGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEASGGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT 222
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT 221

[Close]

BLAST of CsGy1G024270 vs. TrEMBL
Match: tr|A0A1E5WC34|A0A1E5WC34_9POAL (Tubulin beta chain OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0004050 PE=3 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 9.8e-132
Identity = 227/249 (91.16%), Postives = 238/249 (95.58%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 60
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKY+GDS+LQLERINVYYNEASGGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEASGGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCKFPSSVTRIWVLKFTLAH 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCKF   +  + V  F++  
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCKFALLLCSVLVPSFSIYC 240

Query: 241 SLLSFNNLK 250
           SL+S++ +K
Sbjct: 241 SLISYHGMK 249

[Close]

BLAST of CsGy1G024270 vs. TrEMBL
Match: tr|A0A2H5N0X5|A0A2H5N0X5_CITUN (Tubulin beta chain OS=Citrus unshiu OX=55188 GN=CUMW_008750 PE=3 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 1.0e-128
Identity = 221/223 (99.10%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 60
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDS+LQLERINVYYNEASGGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK 224
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK 223

[Close]

BLAST of CsGy1G024270 vs. TrEMBL
Match: tr|A0A2P5BNG5|A0A2P5BNG5_PARAD (Tubulin beta chain OS=Parasponia andersonii OX=3476 GN=PanWU01x14_223860 PE=3 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 1.7e-128
Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 60
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKY GDSELQLERINVYYNEASGGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYCGDSELQLERINVYYNEASGGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK 224
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK 223

[Close]

BLAST of CsGy1G024270 vs. TrEMBL
Match: tr|A0A1E5US70|A0A1E5US70_9POAL (Tubulin beta chain OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0023272 PE=3 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 2.3e-128
Identity = 220/223 (98.65%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 60
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKY+GDS+LQLERINVYYNEASGGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEASGGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK 224
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK 223

[Close]

BLAST of CsGy1G024270 vs. TrEMBL
Match: tr|A0A1D6P5U5|A0A1D6P5U5_MAIZE (Tubulin beta chain OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d046996 PE=3 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 6.6e-128
Identity = 219/223 (98.21%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 60
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKY+GDS+LQLERINVYYNEASGGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEASGGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK 224
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCK 223

The following BLAST results are available for this feature:

BLAST of CsGy1G024270 vs. NCBI nr


Match Name	E-value	Identity	Description
OEL34931.1	1.5e-131	91.16	Tubulin beta-7 chain [Dichanthelium oligosanthes]	[more]
GAY33913.1	1.5e-128	99.10	hypothetical protein CUMW_008750 [Citrus unshiu]	[more]
PON50300.1	2.6e-128	99.10	beta-tubulin [Parasponia andersonii]	[more]
OEL15710.1	3.4e-128	98.65	Tubulin beta-1 chain [Dichanthelium oligosanthes]	[more]
RDY01500.1	3.4e-128	98.65	Tubulin beta-3 chain [Mucuna pruriens]	[more]

BLAST of CsGy1G024270 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G75780.1	5.1e-126	94.59	tubulin beta-1 chain	[more]
AT1G20010.1	6.6e-126	95.05	tubulin beta-5 chain	[more]
AT5G44340.1	1.9e-125	95.02	tubulin beta chain 4	[more]
AT5G12250.1	5.6e-125	93.67	beta-6 tubulin	[more]
AT5G62690.1	7.3e-125	94.57	tubulin beta chain 2	[more]

BLAST of CsGy1G024270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P28551\|TBB3_SOYBN	3.3e-130	100.00	Tubulin beta chain (Fragment) OS=Glycine max OX=3847 GN=TUBB PE=2 SV=2	[more]
sp\|Q40665\|TBB3_ORYSJ	7.2e-130	99.55	Tubulin beta-3 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB3 PE=2 SV=2	[more]
sp\|P46265\|TBB5_ORYSJ	6.1e-129	98.64	Tubulin beta-5 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB5 PE=1 SV=1	[more]
sp\|Q9ZPP0\|TBB1_ELEIN	1.4e-128	98.19	Tubulin beta-1 chain OS=Eleusine indica OX=29674 GN=TUBB1 PE=2 SV=1	[more]
sp\|Q41784\|TBB7_MAIZE	1.4e-128	98.19	Tubulin beta-7 chain OS=Zea mays OX=4577 GN=TUBB7 PE=2 SV=1	[more]

BLAST of CsGy1G024270 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1E5WC34\|A0A1E5WC34_9POAL	9.8e-132	91.16	Tubulin beta chain OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0004050 PE=3...	[more]
tr\|A0A2H5N0X5\|A0A2H5N0X5_CITUN	1.0e-128	99.10	Tubulin beta chain OS=Citrus unshiu OX=55188 GN=CUMW_008750 PE=3 SV=1	[more]
tr\|A0A2P5BNG5\|A0A2P5BNG5_PARAD	1.7e-128	99.10	Tubulin beta chain OS=Parasponia andersonii OX=3476 GN=PanWU01x14_223860 PE=3 SV...	[more]
tr\|A0A1E5US70\|A0A1E5US70_9POAL	2.3e-128	98.65	Tubulin beta chain OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0023272 PE=3...	[more]
tr\|A0A1D6P5U5\|A0A1D6P5U5_MAIZE	6.6e-128	98.21	Tubulin beta chain OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d046996 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005200	structural constituent of cytoskeleton
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007017	microtubule-based process

Vocabulary: **Cellular Component**
Term	Definition
GO:0005874	microtubule

Vocabulary: **INTERPRO**
Term	Definition
IPR017975	Tubulin_CS
IPR013838	Beta-tubulin_BS
IPR036525	Tubulin/FtsZ_GTPase_sf
IPR003008	Tubulin_FtsZ_GTPase
IPR000217	Tubulin
IPR002453	Beta_tubulin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005874	microtubule
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005200	structural constituent of cytoskeleton

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G024270.1	CsGy1G024270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002453	Beta tubulin	PRINTS	PR01163	BETATUBULIN	coord: 152..164 score: 91.43 coord: 88..99 score: 94.76 coord: 41..58 score: 78.29 coord: 108..126 score: 87.58 coord: 212..224 score: 61.14
IPR000217	Tubulin	PRINTS	PR01161	TUBULIN	coord: 51..70 score: 68.16 coord: 10..30 score: 74.61 coord: 176..189 score: 79.11 coord: 190..210 score: 67.82 coord: 132..150 score: 79.04 coord: 106..130 score: 70.19 coord: 93..104 score: 76.26 coord: 151..172 score: 59.63
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 1..222
IPR003008	Tubulin/FtsZ, GTPase domain	SMART	SM00864	Tubulin_4	coord: 47..241 e-value: 2.7E-52 score: 189.7
IPR003008	Tubulin/FtsZ, GTPase domain	PFAM	PF00091	Tubulin	coord: 3..211 e-value: 1.2E-70 score: 237.6
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	GENE3D	G3DSA:3.40.50.1440		coord: 1..250 e-value: 6.4E-111 score: 372.1
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	SUPERFAMILY	SSF52490	Tubulin nucleotide-binding domain-like	coord: 1..237
None	No IPR available	PANTHER	PTHR11588:SF245	TUBULIN BETA-4 CHAIN-RELATED	coord: 1..222
None	No IPR available	CDD	cd02187	beta_tubulin	coord: 2..221 e-value: 1.1133E-154 score: 439.309
IPR013838	Beta tubulin, autoregulation binding site	PROSITE	PS00228	TUBULIN_B_AUTOREG	coord: 1..4
IPR017975	Tubulin, conserved site	PROSITE	PS00227	TUBULIN	coord: 140..146

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G024270	Lsi02G009590	Bottle gourd (USVL1VR-Ls)	cgyblsiB031
CsGy1G024270	Cp4.1LG20g05770	Cucurbita pepo (Zucchini)	cgybcpeB086
CsGy1G024270	Cp4.1LG09g07160	Cucurbita pepo (Zucchini)	cgybcpeB011
CsGy1G024270	MELO3C002830.2	Melon (DHL92) v3.6.1	cgybmedB012
CsGy1G024270	CsaV3_1G037170	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G024270	Cla97C03G059560	Watermelon (97103) v2	cgybwmbB049
CsGy1G024270	Bhi08G000846	Wax gourd	cgybwgoB037
CsGy1G024270	Carg22584	Silver-seed gourd	carcgybB0430
CsGy1G024270	Carg21411	Silver-seed gourd	carcgybB0405

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G024270	Cucumber (Chinese Long) v3	cgybcucB049
CsGy1G024270	Watermelon (97103) v2	cgybwmbB014
CsGy1G024270	Watermelon (97103) v2	cgybwmbB045
CsGy1G024270	Wax gourd	cgybwgoB022
CsGy1G024270	Cucurbita maxima (Rimu)	cgybcmaB067
CsGy1G024270	Cucurbita maxima (Rimu)	cgybcmaB076
CsGy1G024270	Cucurbita maxima (Rimu)	cgybcmaB087
CsGy1G024270	Cucurbita maxima (Rimu)	cgybcmaB100
CsGy1G024270	Cucurbita moschata (Rifu)	cgybcmoB063
CsGy1G024270	Cucurbita moschata (Rifu)	cgybcmoB070
CsGy1G024270	Cucurbita moschata (Rifu)	cgybcmoB083
CsGy1G024270	Cucurbita moschata (Rifu)	cgybcmoB094
CsGy1G024270	Cucurbita pepo (Zucchini)	cgybcpeB019
CsGy1G024270	Cucurbita pepo (Zucchini)	cgybcpeB072
CsGy1G024270	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G024270	Bottle gourd (USVL1VR-Ls)	cgyblsiB019
CsGy1G024270	Melon (DHL92) v3.5.1	cgybmeB013
CsGy1G024270	Melon (DHL92) v3.6.1	cgybmedB071
CsGy1G024270	Watermelon (Charleston Gray)	cgybwcgB046
CsGy1G024270	Watermelon (97103) v1	cgybwmB027
CsGy1G024270	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G024270	Silver-seed gourd	carcgybB0429