CsGy1G023620 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAATTTGAAAGATAGGAAAGTAGATAAGAAATGTTTTAAAAAGAATGACTGACTGAGTTTTGGCCATATAATAATCATACAGACAATTTGTGTAGAGAGATTGAGTCGTCAGATTTCGTAAAAGATTAAAAAATTTAGAATGTACGAACGATTTTGCAGGTAGAGATTAGATTACACCGAGATGGCAGTAATCCCAACAGATATCTGATAGACATTTACCAATTTTGTCATTTACCTGTTGCTTCGTTAAATCCTTAATCACAAATCCCACGCAAGCTCAGCGACCTGTTCATGGTTGAGCCCCCATGGCCACTTTCCGCTCACTCAATCTTTTTCAAGTAAACCAAACATGCCTGCGATTCTTCAATTTCCATTCCCCTCCTCATTTGGGTCCTTTGGCCCTTTCCTTCCCCTCACCTCCCCAACTTTTCTCTCTCCATTCACACCCCCACTTTCCGTTTCTCTCTACTCCAATTTTCCCCTCCCCCACCTTCTCTTTGAGATTTCCCTCCAAAATCCGTCGGAAACATTGCCCAGTTTCCGCAGTTATGTTTTTTCCTGAAAATCCGGTGGTCTCCGACATCTGCGCCACCGCCTTGTCCAGTGGAGTCGCTTTATCTCTGCTTCAATTATGGGCGGAAACCGCGAAACGTGGGCTCGACCAGGTTCTATTCCTTTTGTTCACTGATTTTCCTTTTCTATTGTCTTGAGAAAATGGAAACGGTCTAAAATAGGAGTTTACAACTACAGGGTAAATGTTTTAGTTAATTATTATCCACTGGGGTTTTCTTGGAGTGCGTTTGAGTGTGGTTTTTGAATAAGTATTTAAGGAAAAAAAAGTGCTTAGTAACAGTTCGTTTGATCGTCTACTGCTGCTTTTGGACTCATAATGCTCTACTTTGTGGGGGTGTTCTTTTCCATAAGGCACTTCAAGAATTTTGACTGTTTTCAAAATTAGTTTTGTGTTGTTGATTTGAACTGCAAGTGCCTTGTTCACAGAAAAGATGCTTTTGGTTTCAAGCACTTTAAAACATAGCTTTAGTGGCCCATCCGAATCTAGATCAAGTGATGAAAAGCAACTATTATTATCCAAAAGCAATGATTCAACGACAGGATGTGGGATGGAGAGATCGAACTTTAGACTTCTAGTTGATAGTACAAGTATATGCCAATTGAACTATGCTTATGTTACCTCCTCTGACTCCTGTAATTCTTGAACTAAAAGAAATCATAATCTTAAATGTCTCCTGCGAGATCGGATTATAACATGACCGTAGTACGATATTTGTGCTGTTATACCATATGAAAATGATTGATTCAGTTCAACAAGGCTCATGTTCTATGTACATTGCTTATAAATAATCAATGTTATGCATTTTCTGACAATTGAAAATGCTTATCCGTGGAAATGTGAAAGCTTCAAATTGTGAAACAATTCTGATCTTTTATCAGAGGTGTGTACTTATCTATAATTGGTTCAGAAATTGAACAGGAAGCTTGTTCATATAAGCATTGGGCTTGCTTTCATGCTTTGTTGGCCTATGTTCAGGTGAACTTAGTTTTAAAAAATGTTAATTCTGACCCTTCTCCTACTCCTGTACTTGCACTTATATGCTTGAATCAAATGATGCTACTCCTTGTAGTTCTGGTTATCAAGGAGCAATACTTGCATCTCTAATTCCCGGTGCCAATGTAATGCGAATGCTCCTCTTGGGATTTGGGATATTGAAAGATGAGGCTACGTTAAAGTCAATGAGCAGATATGGAGACTACAGGTACAATTTTGTAAAGAACATAATCGAGTATACAGTTAACCAAATGAATGTTGAATCTTAGGAAAACTCTCTCCATTTGTTAGCTTCTTCTTCCATTCATTGTTTGCCATTGCAATTCTTTTTGGCTCAATTGTACATCATTTGATGTATTAACCCATGGTTGAAAATTAATAGATGACAGTATTTATTCAGTAGTAGTGCATGAAATGTTATCCTCCTGGAGAACTCAAAGAATAAGAGCCATTCATACAAATGTTGGACAATACTCACAAAAAAAAGCATAGCGCTCATTATTTGGTTCATTTATGCTTAATTTTCTAATTTGACCAGCATGTTTTTATCCATCAGGGAGCTTTTGAAGGGGCCTTTGTATTATGTTGCAACAATTACGTTTGTTTGTATTTTCTACTGGAGGACATCCCCCATTTCAATTGCTCTGATATGCAACTTATGTGCCGGAGATGGTACTTTTCACTTTTGTCTATCAACTTGTTAACTCTTTCCAACCACAAATTTAGAGCTTACCCTTAACAACCTTCACACTTCACTATTTCAGGGCTTGCTGATATTGTTGGAAGACGATTTGGAAGTGAAAAGATCTTTTACAATAAAAACAAGTCACTTGCTGGTAGTGTGGCAATGGCAACTGCTGGTTTTCTTGCATCTATTGGGTAAACTCTCTCTTCGCTTTGGATTTGAGTCATCAAGTATAACGAGTTACTGTGTTTGTGATCTTTCTGGGTTGGTTTAGTAAGTATTGTGATTTGTGAATGACAGATATATGTACTATTTCTCCTTGTTTGGGTATGTTGAGGCAAGCGTCGGAATGGCTATGAGATTCTTAATTGTGTCCCTTGCCTCAGCATTGGTGGAGTCTCTCCCCATAAGCACTGAGATTGACGACAACCTCACTGTTCCACTCACTTCGTTTCTGGTAGGGAGCCTAGTTTTTTAGACTTTTTTGAGCCAAAAAGATAAAGTTGCTACGTCTAGAAAGATGGGAAATGGGGATGTCGTTTTGCAATGTCACAAGGCACGGGGCGACAACTTGGCTTTTCACGATGTGATTGGACACAAGAAGATTTCTTACAAATCCTATTTGACATGTAGTTTTATTATGTTAACTTGAATAGATTCTACTGAACCAGCTGATATTAGACATTTATAATGAAATTCTATTGAAGCTATTGTTATGAAAATCCATGTGATTATGTTAAAGGGAATGCATTGTGTTGTGAAGTTCCAACGAAACAGTGATTGGAACTTCAATATGCAGAGAAGCTAAAATCAGCTTGAAGAAGAAGATGAAATCCGAGCTGCCTCATGGAAACGAATAAGATCGCCAAACAAAACAAAGAACAGAGAAAAACAAAAAAGTTAAATTTTTGCAATAAAAAAAATTTGAGTGCCAT TAATTTGAAAGATAGGAAAGTAGATAAGAAATGTTTTAAAAAGAATGACTGACTGAGTTTTGGCCATATAATAATCATACAGACAATTTGTGTAGAGAGATTGAGTCGTCAGATTTCGTAAAAGATTAAAAAATTTAGAATGTACGAACGATTTTGCAGGTAGAGATTAGATTACACCGAGATGGCAGTAATCCCAACAGATATCTGATAGACATTTACCAATTTTGTCATTTACCTGTTGCTTCGTTAAATCCTTAATCACAAATCCCACGCAAGCTCAGCGACCTGTTCATGGTTGAGCCCCCATGGCCACTTTCCGCTCACTCAATCTTTTTCAAGTAAACCAAACATGCCTGCGATTCTTCAATTTCCATTCCCCTCCTCATTTGGGTCCTTTGGCCCTTTCCTTCCCCTCACCTCCCCAACTTTTCTCTCTCCATTCACACCCCCACTTTCCGTTTCTCTCTACTCCAATTTTCCCCTCCCCCACCTTCTCTTTGAGATTTCCCTCCAAAATCCGTCGGAAACATTGCCCAGTTTCCGCAGTTATGTTTTTTCCTGAAAATCCGGTGGTCTCCGACATCTGCGCCACCGCCTTGTCCAGTGGAGTCGCTTTATCTCTGCTTCAATTATGGGCGGAAACCGCGAAACGTGGGCTCGACCAGAAATTGAACAGGAAGCTTGTTCATATAAGCATTGGGCTTGCTTTCATGCTTTGTTGGCCTATGTTCAGTTCTGGTTATCAAGGAGCAATACTTGCATCTCTAATTCCCGGTGCCAATGTAATGCGAATGCTCCTCTTGGGATTTGGGATATTGAAAGATGAGGCTACGTTAAAGTCAATGAGCAGATATGGAGACTACAGGGAGCTTTTGAAGGGGCCTTTGTATTATGTTGCAACAATTACGTTTGTTTGTATTTTCTACTGGAGGACATCCCCCATTTCAATTGCTCTGATATGCAACTTATGTGCCGGAGATGGGCTTGCTGATATTGTTGGAAGACGATTTGGAAGTGAAAAGATCTTTTACAATAAAAACAAGTCACTTGCTGGTAGTGTGGCAATGGCAACTGCTGGTTTTCTTGCATCTATTGGATATATGTACTATTTCTCCTTGTTTGGGTATGTTGAGGCAAGCGTCGGAATGGCTATGAGATTCTTAATTGTGTCCCTTGCCTCAGCATTGGTGGAGTCTCTCCCCATAAGCACTGAGATTGACGACAACCTCACTGTTCCACTCACTTCGTTTCTGGTAGGGAGCCTAGTTTTTTAGACTTTTTTGAGCCAAAAAGATAAAGTTGCTACGTCTAGAAAGATGGGAAATGGGGATGTCGTTTTGCAATGTCACAAGGCACGGGGCGACAACTTGGCTTTTCACGATGTGATTGGACACAAGAAGATTTCTTACAAATCCTATTTGACATGTAGTTTTATTATGTTAACTTGAATAGATTCTACTGAACCAGCTGATATTAGACATTTATAATGAAATTCTATTGAAGCTATTGTTATGAAAATCCATGTGATTATGTTAAAGGGAATGCATTGTGTTGTGAAGTTCCAACGAAACAGTGATTGGAACTTCAATATGCAGAGAAGCTAAAATCAGCTTGAAGAAGAAGATGAAATCCGAGCTGCCTCATGGAAACGAATAAGATCGCCAAACAAAACAAAGAACAGAGAAAAACAAAAAAGTTAAATTTTTGCAATAAAAAAAATTTGAGTGCCAT ATGGCCACTTTCCGCTCACTCAATCTTTTTCAAGTAAACCAAACATGCCTGCGATTCTTCAATTTCCATTCCCCTCCTCATTTGGGTCCTTTGGCCCTTTCCTTCCCCTCACCTCCCCAACTTTTCTCTCTCCATTCACACCCCCACTTTCCGTTTCTCTCTACTCCAATTTTCCCCTCCCCCACCTTCTCTTTGAGATTTCCCTCCAAAATCCGTCGGAAACATTGCCCAGTTTCCGCAGTTATGTTTTTTCCTGAAAATCCGGTGGTCTCCGACATCTGCGCCACCGCCTTGTCCAGTGGAGTCGCTTTATCTCTGCTTCAATTATGGGCGGAAACCGCGAAACGTGGGCTCGACCAGAAATTGAACAGGAAGCTTGTTCATATAAGCATTGGGCTTGCTTTCATGCTTTGTTGGCCTATGTTCAGTTCTGGTTATCAAGGAGCAATACTTGCATCTCTAATTCCCGGTGCCAATGTAATGCGAATGCTCCTCTTGGGATTTGGGATATTGAAAGATGAGGCTACGTTAAAGTCAATGAGCAGATATGGAGACTACAGGGAGCTTTTGAAGGGGCCTTTGTATTATGTTGCAACAATTACGTTTGTTTGTATTTTCTACTGGAGGACATCCCCCATTTCAATTGCTCTGATATGCAACTTATGTGCCGGAGATGGGCTTGCTGATATTGTTGGAAGACGATTTGGAAGTGAAAAGATCTTTTACAATAAAAACAAGTCACTTGCTGGTAGTGTGGCAATGGCAACTGCTGGTTTTCTTGCATCTATTGGATATATGTACTATTTCTCCTTGTTTGGGTATGTTGAGGCAAGCGTCGGAATGGCTATGAGATTCTTAATTGTGTCCCTTGCCTCAGCATTGGTGGAGTCTCTCCCCATAAGCACTGAGATTGACGACAACCTCACTGTTCCACTCACTTCGTTTCTGGTAGGGAGCCTAGTTTTTTAG MATFRSLNLFQVNQTCLRFFNFHSPPHLGPLALSFPSPPQLFSLHSHPHFPFLSTPIFPSPTFSLRFPSKIRRKHCPVSAVMFFPENPVVSDICATALSSGVALSLLQLWAETAKRGLDQKLNRKLVHISIGLAFMLCWPMFSSGYQGAILASLIPGANVMRMLLLGFGILKDEATLKSMSRYGDYRELLKGPLYYVATITFVCIFYWRTSPISIALICNLCAGDGLADIVGRRFGSEKIFYNKNKSLAGSVAMATAGFLASIGYMYYFSLFGYVEASVGMAMRFLIVSLASALVESLPISTEIDDNLTVPLTSFLVGSLVF
BLAST of CsGy1G023620 vs. NCBI nr
Match: XP_004153718.1 (PREDICTED: probable phytol kinase 2, chloroplastic [Cucumis sativus] >XP_011658731.1 PREDICTED: probable phytol kinase 2, chloroplastic [Cucumis sativus] >KGN65833.1 hypothetical protein Csa_1G533400 [Cucumis sativus]) HSP 1 Score: 636.0 bits (1639), Expect = 7.2e-179 Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0
BLAST of CsGy1G023620 vs. NCBI nr
Match: XP_008457339.1 (PREDICTED: farnesol kinase, chloroplastic [Cucumis melo]) HSP 1 Score: 585.9 bits (1509), Expect = 8.5e-164 Identity = 298/322 (92.55%), Postives = 307/322 (95.34%), Query Frame = 0
BLAST of CsGy1G023620 vs. NCBI nr
Match: XP_023519149.1 (farnesol kinase, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 435.3 bits (1118), Expect = 1.9e-118 Identity = 233/305 (76.39%), Postives = 252/305 (82.62%), Query Frame = 0
BLAST of CsGy1G023620 vs. NCBI nr
Match: XP_022970488.1 (farnesol kinase, chloroplastic [Cucurbita maxima]) HSP 1 Score: 434.9 bits (1117), Expect = 2.4e-118 Identity = 231/299 (77.26%), Postives = 250/299 (83.61%), Query Frame = 0
BLAST of CsGy1G023620 vs. NCBI nr
Match: XP_022964863.1 (farnesol kinase, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 434.5 bits (1116), Expect = 3.2e-118 Identity = 233/297 (78.45%), Postives = 252/297 (84.85%), Query Frame = 0
BLAST of CsGy1G023620 vs. TAIR10
Match: AT5G58560.1 (Phosphatidate cytidylyltransferase family protein) HSP 1 Score: 354.8 bits (909), Expect = 5.8e-98 Identity = 186/288 (64.58%), Postives = 224/288 (77.78%), Query Frame = 0
BLAST of CsGy1G023620 vs. TAIR10
Match: AT5G04490.1 (vitamin E pathway gene 5) HSP 1 Score: 189.5 bits (480), Expect = 3.2e-48 Identity = 109/283 (38.52%), Postives = 166/283 (58.66%), Query Frame = 0
BLAST of CsGy1G023620 vs. Swiss-Prot
Match: sp|Q67ZM7|FOLK_ARATH (Farnesol kinase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FOLK PE=1 SV=2) HSP 1 Score: 354.8 bits (909), Expect = 1.0e-96 Identity = 186/288 (64.58%), Postives = 224/288 (77.78%), Query Frame = 0
BLAST of CsGy1G023620 vs. Swiss-Prot
Match: sp|Q2N2K0|PHYK3_SOYBN (Probable phytol kinase 3, chloroplastic OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 4.2e-90 Identity = 170/236 (72.03%), Postives = 198/236 (83.90%), Query Frame = 0
BLAST of CsGy1G023620 vs. Swiss-Prot
Match: sp|Q5N9J9|PHYK2_ORYSJ (Probable phytol kinase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0832000 PE=2 SV=3) HSP 1 Score: 308.1 bits (788), Expect = 1.1e-82 Identity = 161/253 (63.64%), Postives = 201/253 (79.45%), Query Frame = 0
BLAST of CsGy1G023620 vs. Swiss-Prot
Match: sp|Q2N2K1|PHYK1_SOYBN (Probable phytol kinase 1, chloroplastic OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 5.2e-48 Identity = 101/230 (43.91%), Postives = 148/230 (64.35%), Query Frame = 0
BLAST of CsGy1G023620 vs. Swiss-Prot
Match: sp|Q9LZ76|PHYK1_ARATH (Phytol kinase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VTE5 PE=1 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 5.8e-47 Identity = 109/283 (38.52%), Postives = 166/283 (58.66%), Query Frame = 0
BLAST of CsGy1G023620 vs. TrEMBL
Match: tr|A0A0A0LVL1|A0A0A0LVL1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533400 PE=4 SV=1) HSP 1 Score: 636.0 bits (1639), Expect = 4.7e-179 Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0
BLAST of CsGy1G023620 vs. TrEMBL
Match: tr|A0A1S3C4U9|A0A1S3C4U9_CUCME (farnesol kinase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497053 PE=4 SV=1) HSP 1 Score: 585.9 bits (1509), Expect = 5.6e-164 Identity = 298/322 (92.55%), Postives = 307/322 (95.34%), Query Frame = 0
BLAST of CsGy1G023620 vs. TrEMBL
Match: tr|A0A0D2SKX1|A0A0D2SKX1_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G270100 PE=4 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 1.0e-101 Identity = 195/287 (67.94%), Postives = 230/287 (80.14%), Query Frame = 0
BLAST of CsGy1G023620 vs. TrEMBL
Match: tr|A0A2P5QW83|A0A2P5QW83_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA37488 PE=4 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 5.2e-101 Identity = 194/286 (67.83%), Postives = 227/286 (79.37%), Query Frame = 0
BLAST of CsGy1G023620 vs. TrEMBL
Match: tr|A0A2R6P6D0|A0A2R6P6D0_ACTCH (Phytol kinase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc31830 PE=4 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 5.2e-101 Identity = 199/297 (67.00%), Postives = 240/297 (80.81%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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