CsGy1G022110 (gene) Cucumber (Gy14) v2

NameCsGy1G022110
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr1 : 20909137 .. 20911332 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAGACTCCGTAGGCATGCCAGTCAGAGTCTTTTCTTTTCAACATCAAATCCTTTCTCTGTTTTTGCAATGATCACTCTGTACAAAATCCAACACCATTCGTGTTTAAATCCCAAACAACATACCGACACAAGAAGAGAGCACCCATTTGAAGAAGAAGACCCTAAACTTTCAGCCATGGCTACTCATAATCCCAGTGCGTTTTTTTCCCTCTTTTCTGTTCGTACACTTATTTTCTACTTAATCAACTTCAATCTACAAAACCCATGTTCCAATAAGTTGACAACACTCAATGGGGTTTGAAGTTTTACTCCTTTTCAATTTAATGCCCAAATTGCTATTTAACTTGTAATACTATTTTTAAAAATGGCCTAAATCCCTCGTTTTCACTTTTCAGGATCAAGTGTGTGACATTTGTGGTGATATTGTGTATGGGGAAGTAGTTTTCTCTTGGTCTGCCTGCTAAATAGCCTGTGAGCACATCTATGCTTTGCTTTCTCTTTTCTTATCATTTTAATTTCTTTTTTAGTTTTCTTCTTATTTTGGTCTGATCTTAATATCCTTGTTTCTTTAATGTACTTTTGTCGTTGTCTGTACCAGTTGTTGTATCATACACGTTTTAGCTGTAATACAAAAAGATGAAACTTTTCAAATACCTGTTTCTTTTCCAAATTCTAATGACGAACGGTCAAATGTCCATTGATATTCTCTTCATGCACTCTTTACAGTAAACATTCAAACAATATTGGAAGAATGGAGAGCTCTTCATCAATGGATTCCAACAGTAACAACATGAACAACATGGTAAAACCCTACAAACTCCTTATTTTCCACTAATGTTTTACTCTCTGTTCTTTCTCTCCACACTACATTTTATTGTTTTACTGTTCAAAGAACCTTACTTTCATCGATTCATTTTTCTATTACTGTCTCATTTGGTGAAAATCTTTGTTGGGGTTTCAAATTTATCTCTATTTAAAGCTCATTTGATTTTCAAGTTGAAATTTGTGACATTTGTGGCCATGTTGGGTATGTTGAGGTACTTGTAACATGCTCTCTTTGCAAATTAGCTCGTCAGCACATGTAATTATTCACCCATCGATCTCTTTTGTTTATTTAACAATTTATTCCCTTAACTTTAGTATCTCACAACAATATTTAGCGCCCGTTTTTTAAAATTACAGTGTAATGTGTTGTTGAATATAATGATATTTATTGTATAGGGTACGTTCATGAACTAATTAGAGGGCATGAATTAGGTCCAGGATTGAAGTTGTTTGTTCAATTTAGTCACTCAACTTTGGTATCTATAACAATTTAATCTCGATGAAGGAAGATGTTTTCGAGTTAATGAAATTTCTTATGTATAGGTACATCCACGAACTATTTAAAAGCAAGTAGTGAAGTTGTTAAGTCTGAAAAGTTGTTTAGTGGTGAGACCGTATTATAAGAAGTTTTAGTACAAAGTGAGGGTGGAGGATTTAAACCCGTGACCTCTTGTCTTCATGTGCGTACATACATGTGCTAGATGAGTCAAGCTATTATAAGGAGTTAATGAGTAACAAAATTGATGTCTTTTAATCATGGGGTCCCATATACTCCTTGAGCTAAAGAACGACTACACTATTTTTCTCTTTGAGCGAGACATATGCCTTTAGGGACACAAATATGTTTATAAACTACGTATGAAGATTAAATTGTTACATAAGGAAGTTTTCATGTTACGAATTTGTAAATATGTAGGCTAAATTGTTATGGTTCTAAAGTTCAGGACTAAATTATTAACTTCACGAAAGATCTTTTTCATGGTTGGTTGCTTAATTCTGTTTTCATCCCTCTACCAGTTATTGCATGAGGGTTTATTTGAAGGATATCCCAAAATGTTGGGTTTGTGAGTCATGTGCTTGTCCATTGGGGGAGCCAAACATCATTATTTTGGATGAATTTGAGGAAGCACATACAAAAACAACAAATGTTGATGTTGCTGCATTGGCTTGTGAGCCAAACATCATTATTTTGGATGAATTTGAGGAAACATATACAAAAACAAAAAATGTTGATGTTGCTGCGTCAGTTTGTGAGCCAAACATCATTATTTTGGATGAATTTGAGGAAACAGATACAAAAACAACAAATATTAATGTTGCTTCTGTACTTGGACAACAACCTCCTCCAGCCACAACCGAATCTCAA

mRNA sequence

ATGTTGAGACTCCGTAGGCATGCCAGTCAGAGTCTTTTCTTTTCAACATCAAATCCTTTCTCTGTTTTTGCAATGATCACTCTGTACAAAATCCAACACCATTCGTGTTTAAATCCCAAACAACATACCGACACAAGAAGAGAGCACCCATTTGAAGAAGAAGACCCTAAACTTTCAGCCATGGCTACTCATAATCCCAATACAAAAACAACAAATATTAATGTTGCTTCTGTACTTGGACAACAACCTCCTCCAGCCACAACCGAATCTCAA

Coding sequence (CDS)

ATGTTGAGACTCCGTAGGCATGCCAGTCAGAGTCTTTTCTTTTCAACATCAAATCCTTTCTCTGTTTTTGCAATGATCACTCTGTACAAAATCCAACACCATTCGTGTTTAAATCCCAAACAACATACCGACACAAGAAGAGAGCACCCATTTGAAGAAGAAGACCCTAAACTTTCAGCCATGGCTACTCATAATCCCAATACAAAAACAACAAATATTAATGTTGCTTCTGTACTTGGACAACAACCTCCTCCAGCCACAACCGAATCTCAA

Protein sequence

MLRLRRHASQSLFFSTSNPFSVFAMITLYKIQHHSCLNPKQHTDTRREHPFEEEDPKLSAMATHNPNTKTTNINVASVLGQQPPPATTESQ
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G022110.1CsGy1G022110.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..59

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G022110Silver-seed gourdcarcgybB0316
CsGy1G022110Silver-seed gourdcarcgybB0341
CsGy1G022110Silver-seed gourdcarcgybB0448
CsGy1G022110Silver-seed gourdcarcgybB0724
CsGy1G022110Cucumber (Chinese Long) v3cgybcucB001
CsGy1G022110Watermelon (97103) v2cgybwmbB027
CsGy1G022110Watermelon (97103) v2cgybwmbB042
CsGy1G022110Wax gourdcgybwgoB016
CsGy1G022110Wax gourdcgybwgoB018
CsGy1G022110Wax gourdcgybwgoB038
CsGy1G022110Cucurbita maxima (Rimu)cgybcmaB075
CsGy1G022110Cucurbita maxima (Rimu)cgybcmaB104
CsGy1G022110Cucurbita maxima (Rimu)cgybcmaB117
CsGy1G022110Cucurbita maxima (Rimu)cgybcmaB118
CsGy1G022110Cucurbita maxima (Rimu)cgybcmaB121
CsGy1G022110Cucurbita moschata (Rifu)cgybcmoB069
CsGy1G022110Cucurbita moschata (Rifu)cgybcmoB098
CsGy1G022110Cucurbita moschata (Rifu)cgybcmoB109
CsGy1G022110Cucurbita moschata (Rifu)cgybcmoB111
CsGy1G022110Cucurbita pepo (Zucchini)cgybcpeB035
CsGy1G022110Cucurbita pepo (Zucchini)cgybcpeB071
CsGy1G022110Cucurbita pepo (Zucchini)cgybcpeB099
CsGy1G022110Cucurbita pepo (Zucchini)cgybcpeB138
CsGy1G022110Cucumber (Chinese Long) v2cgybcuB002
CsGy1G022110Bottle gourd (USVL1VR-Ls)cgyblsiB006
CsGy1G022110Bottle gourd (USVL1VR-Ls)cgyblsiB027
CsGy1G022110Melon (DHL92) v3.5.1cgybmeB023
CsGy1G022110Melon (DHL92) v3.6.1cgybmedB021
CsGy1G022110Watermelon (Charleston Gray)cgybwcgB028
CsGy1G022110Watermelon (Charleston Gray)cgybwcgB044
CsGy1G022110Watermelon (97103) v1cgybwmB023
CsGy1G022110Watermelon (97103) v1cgybwmB069
CsGy1G022110Wild cucumber (PI 183967)cgybcpiB002