CsGy1G021550 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G021550
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 20244359 .. 20244704 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACAATGGTTTACTTCACAAAACAACTTGTGAATGGAAACATGCATCTTGTAATACTTTCTGACAAAAATCAACCTAAAGAAGGTGGACTTAGTAGTCTTCTTGTGGAGAAGTCATGGCCTGACCCTTTTGCAGATCATTGGCCACGTTTAGACAACCGTTCGATTCTTCTCAAATTATCTGTGGAAATATCTTTGTCTGAGGGGAAGAATGTATAGGTTCTACAATCCTCCATCCATGATGAGGCTCCTACTTTTGAAAGAGTTCTCACTCTCAGGCATCGTCTAATTGAAGGTCAAACACATTGGGGTGCAGTGACTAAAGTCTCTGAAGAGTTTTACTTTACT

mRNA sequence

AACAATGGTTTACTTCACAAAACAACTTGTGAATGGAAACATGCATCTTGTAATACTTTCTGACAAAAATCAACCTAAAGAAGGTGGACTTAGTAGTCTTCTTGTGGAGAAGTCATGGCCTGACCCTTTTGCAGATCATTGGCCACGTTTAGACAACCGTTCGATTCTTCTCAAATTATCTGTGGAAATATCTTTGTCTGAGGGGAAGAATGTTCTACAATCCTCCATCCATGATGAGGCTCCTACTTTTGAAAGAGTTCTCACTCTCAGGCATCGTCTAATTGAAGGTCAAACACATTGGGGTGCAGTGACTAAAGTCTCTGAAGAGTTTTACTTTACT

Coding sequence (CDS)

ATGGTTTACTTCACAAAACAACTTGTGAATGGAAACATGCATCTTGTAATACTTTCTGACAAAAATCAACCTAAAGAAGGTGGACTTAGTAGTCTTCTTGTGGAGAAGTCATGGCCTGACCCTTTTGCAGATCATTGGCCACGTTTAGACAACCGTTCGATTCTTCTCAAATTATCTGTGGAAATATCTTTGTCTGAGGGGAAGAATGTTCTACAATCCTCCATCCATGATGAGGCTCCTACTTTTGAAAGAGTTCTCACTCTCAGGCATCGTCTAATTGAAGGTCAAACACATTGGGGTGCAGTGACTAAAGTCTCTGAAGAGTTTTACTTTACT

Protein sequence

MVYFTKQLVNGNMHLVILSDKNQPKEGGLSSLLVEKSWPDPFADHWPRLDNRSILLKLSVEISLSEGKNVLQSSIHDEAPTFERVLTLRHRLIEGQTHWGAVTKVSEEFYFT
Homology
[Close]
BLAST of CsGy1G021550 vs. NCBI nr
Match: XP_008442010.1 (PREDICTED: uncharacterized protein LOC103486002 [Cucumis melo])

HSP 1 Score: 138.3 bits (347), Expect = 1.6e-29
Identity = 72/114 (63.16%), Postives = 83/114 (72.81%), Query Frame = 0 

Query: 1   MVYFTKQLVNGNMHLVILSDKNQPKEGGLSSLLVEKSWPDPFADHWPRLDNRSILLKLSV 60
           M+YFT++ + G  HLV+  D+NQ +E GL SLLVEK W   FADHWPRLDN SIL +LSV
Sbjct: 8   MIYFTERFLFGVRHLVVFYDRNQLREDGL-SLLVEKPWTGSFADHWPRLDNSSILPRLSV 67

Query: 61  EISLSEGKN--VLQSSIHDEAPTFERVLTLRHRLIEGQTHWGAVTKVSEEFYFT 113
           EI L EGK   VLQSSIH+E P  +RVLTL   LIEGQT WG +TKV  EF FT
Sbjct: 68  EIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFT 120

[Close]
BLAST of CsGy1G021550 vs. NCBI nr
Match: XP_016902354.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 78.6 bits (192), Expect = 1.5e-11
Identity = 41/64 (64.06%), Postives = 49/64 (76.56%), Query Frame = 0 

Query: 51  NRSILLKLSVEISLSEGKN--VLQSSIHDEAPTFERVLTLRHRLIEGQTHWGAVTKVSEE 110
           ++  ++ LS+EI LSEGKN  VLQSSIH++A   +R LTLR RLIEGQT WGAVTKV  E
Sbjct: 206 SQDTMILLSMEIPLSEGKNAWVLQSSIHNKALNSDRALTLRQRLIEGQTRWGAVTKVPRE 265

Query: 111 FYFT 113
           F FT
Sbjct: 266 FCFT 269

[Close]
BLAST of CsGy1G021550 vs. NCBI nr
Match: POF00397.1 (hypothetical protein CFP56_76205 [Quercus suber])

HSP 1 Score: 58.9 bits (141), Expect = 1.3e-05
Identity = 37/116 (31.90%), Postives = 60/116 (51.72%), Query Frame = 0 

Query: 1   MVYFTKQLVNGNMHLVILSDKNQPKEGGLSSLLVEKSWPDPFADHWPRLDNRSILLKLSV 60
           MVYF     +   +LVI  D+N   E GL SLLVEK     F+  WP+ ++   +++ + 
Sbjct: 1   MVYFRDISSSDKKYLVISKDQNDATEKGL-SLLVEKPIIGRFSPVWPKQNDFGDIVEWTY 60

Query: 61  EISLSEGKN----VLQSSIHDEAPTFERVLTLRHRLIEGQTHWGAVTKVSEEFYFT 113
           + S +         L++S+H        + TL  R+I G+T WG V +++ EF +T
Sbjct: 61  DTSQNPDSPSRAWSLRTSLHKNTTESGPLRTLGRRIISGETRWGTVFRINGEFGYT 115

[Close]
BLAST of CsGy1G021550 vs. NCBI nr
Match: POE85838.1 (hypothetical protein CFP56_07175 [Quercus suber])

HSP 1 Score: 56.2 bits (134), Expect = 8.1e-05
Identity = 37/116 (31.90%), Postives = 59/116 (50.86%), Query Frame = 0 

Query: 1   MVYFTKQLVNGNMHLVILSDKNQPKEGGLSSLLVEKSWPDPFADHWPRLDNRSILLKLSV 60
           MVYF     + N +LVI  D+N   E GL SLLVEK     F+  W + ++   +++ + 
Sbjct: 1   MVYFRDISSSDNKYLVISKDQNDATEKGL-SLLVEKPIIGRFSPVWLKQNDFGDIVEWTY 60

Query: 61  EISLSEGKN----VLQSSIHDEAPTFERVLTLRHRLIEGQTHWGAVTKVSEEFYFT 113
           + S +         L++S+H        + TL  R+I G+T WG V + + EF +T
Sbjct: 61  DTSQNPDSPSRAWSLRTSLHKNTTESGPLRTLGRRIISGETRWGTVFRTNGEFGYT 115

[Close]
BLAST of CsGy1G021550 vs. NCBI nr
Match: POE46554.1 (hypothetical protein CFP56_32964 [Quercus suber])

HSP 1 Score: 55.8 bits (133), Expect = 1.1e-04
Identity = 35/116 (30.17%), Postives = 59/116 (50.86%), Query Frame = 0 

Query: 1   MVYFTKQLVNGNMHLVILSDKNQPKEGGLSSLLVEKSWPDPFADHWPRLDNRSILLKLSV 60
           MVYF     +   +LVI  D+N   E GL SLLVEK     F+  WP+ ++   +++ + 
Sbjct: 1   MVYFRDISSSDKKYLVISKDQNDATEKGL-SLLVEKPIIGRFSPVWPKQNDFGDIVEWTY 60

Query: 61  EISLSEGKN----VLQSSIHDEAPTFERVLTLRHRLIEGQTHWGAVTKVSEEFYFT 113
           + S +         L++S+H        + TL  R+I G+T WG V +++  ++ T
Sbjct: 61  DTSQNPDSPSRAWSLRTSLHKNTTESGPLRTLGRRIISGETRWGTVFRINGHYFDT 115

[Close]
BLAST of CsGy1G021550 vs. TrEMBL
Match: tr|A0A1S3B4Q9|A0A1S3B4Q9_CUCME (uncharacterized protein LOC103486002 OS=Cucumis melo OX=3656 GN=LOC103486002 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29
Identity = 72/114 (63.16%), Postives = 83/114 (72.81%), Query Frame = 0 

Query: 1   MVYFTKQLVNGNMHLVILSDKNQPKEGGLSSLLVEKSWPDPFADHWPRLDNRSILLKLSV 60
           M+YFT++ + G  HLV+  D+NQ +E GL SLLVEK W   FADHWPRLDN SIL +LSV
Sbjct: 8   MIYFTERFLFGVRHLVVFYDRNQLREDGL-SLLVEKPWTGSFADHWPRLDNSSILPRLSV 67

Query: 61  EISLSEGKN--VLQSSIHDEAPTFERVLTLRHRLIEGQTHWGAVTKVSEEFYFT 113
           EI L EGK   VLQSSIH+E P  +RVLTL   LIEGQT WG +TKV  EF FT
Sbjct: 68  EIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFT 120

[Close]
BLAST of CsGy1G021550 vs. TrEMBL
Match: tr|A0A1S4E295|A0A1S4E295_CUCME (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107991647 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-11
Identity = 41/64 (64.06%), Postives = 49/64 (76.56%), Query Frame = 0 

Query: 51  NRSILLKLSVEISLSEGKN--VLQSSIHDEAPTFERVLTLRHRLIEGQTHWGAVTKVSEE 110
           ++  ++ LS+EI LSEGKN  VLQSSIH++A   +R LTLR RLIEGQT WGAVTKV  E
Sbjct: 206 SQDTMILLSMEIPLSEGKNAWVLQSSIHNKALNSDRALTLRQRLIEGQTRWGAVTKVPRE 265

Query: 111 FYFT 113
           F FT
Sbjct: 266 FCFT 269

[Close]
BLAST of CsGy1G021550 vs. TrEMBL
Match: tr|A0A2P4L5C0|A0A2P4L5C0_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_76205 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.3e-06
Identity = 37/116 (31.90%), Postives = 60/116 (51.72%), Query Frame = 0 

Query: 1   MVYFTKQLVNGNMHLVILSDKNQPKEGGLSSLLVEKSWPDPFADHWPRLDNRSILLKLSV 60
           MVYF     +   +LVI  D+N   E GL SLLVEK     F+  WP+ ++   +++ + 
Sbjct: 1   MVYFRDISSSDKKYLVISKDQNDATEKGL-SLLVEKPIIGRFSPVWPKQNDFGDIVEWTY 60

Query: 61  EISLSEGKN----VLQSSIHDEAPTFERVLTLRHRLIEGQTHWGAVTKVSEEFYFT 113
           + S +         L++S+H        + TL  R+I G+T WG V +++ EF +T
Sbjct: 61  DTSQNPDSPSRAWSLRTSLHKNTTESGPLRTLGRRIISGETRWGTVFRINGEFGYT 115

[Close]
BLAST of CsGy1G021550 vs. TrEMBL
Match: tr|A0A2P4JYI2|A0A2P4JYI2_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_07175 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.4e-05
Identity = 37/116 (31.90%), Postives = 59/116 (50.86%), Query Frame = 0 

Query: 1   MVYFTKQLVNGNMHLVILSDKNQPKEGGLSSLLVEKSWPDPFADHWPRLDNRSILLKLSV 60
           MVYF     + N +LVI  D+N   E GL SLLVEK     F+  W + ++   +++ + 
Sbjct: 1   MVYFRDISSSDNKYLVISKDQNDATEKGL-SLLVEKPIIGRFSPVWLKQNDFGDIVEWTY 60

Query: 61  EISLSEGKN----VLQSSIHDEAPTFERVLTLRHRLIEGQTHWGAVTKVSEEFYFT 113
           + S +         L++S+H        + TL  R+I G+T WG V + + EF +T
Sbjct: 61  DTSQNPDSPSRAWSLRTSLHKNTTESGPLRTLGRRIISGETRWGTVFRTNGEFGYT 115

[Close]
BLAST of CsGy1G021550 vs. TrEMBL
Match: tr|A0A2P4GRB6|A0A2P4GRB6_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_32964 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.0e-05
Identity = 35/116 (30.17%), Postives = 59/116 (50.86%), Query Frame = 0 

Query: 1   MVYFTKQLVNGNMHLVILSDKNQPKEGGLSSLLVEKSWPDPFADHWPRLDNRSILLKLSV 60
           MVYF     +   +LVI  D+N   E GL SLLVEK     F+  WP+ ++   +++ + 
Sbjct: 1   MVYFRDISSSDKKYLVISKDQNDATEKGL-SLLVEKPIIGRFSPVWPKQNDFGDIVEWTY 60

Query: 61  EISLSEGKN----VLQSSIHDEAPTFERVLTLRHRLIEGQTHWGAVTKVSEEFYFT 113
           + S +         L++S+H        + TL  R+I G+T WG V +++  ++ T
Sbjct: 61  DTSQNPDSPSRAWSLRTSLHKNTTESGPLRTLGRRIISGETRWGTVFRINGHYFDT 115

The following BLAST results are available for this feature:
BLAST of CsGy1G021550 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008442010.11.6e-2963.16PREDICTED: uncharacterized protein LOC103486002 [Cucumis melo][more]
XP_016902354.11.5e-1164.06PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo][more]
POF00397.11.3e-0531.90hypothetical protein CFP56_76205 [Quercus suber][more]
POE85838.18.1e-0531.90hypothetical protein CFP56_07175 [Quercus suber][more]
POE46554.11.1e-0430.17hypothetical protein CFP56_32964 [Quercus suber][more]
BLAST of CsGy1G021550 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G021550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G021550 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B4Q9|A0A1S3B4Q9_CUCME1.1e-2963.16uncharacterized protein LOC103486002 OS=Cucumis melo OX=3656 GN=LOC103486002 PE=... [more]
tr|A0A1S4E295|A0A1S4E295_CUCME1.0e-1164.06uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=... [more]
tr|A0A2P4L5C0|A0A2P4L5C0_QUESU8.3e-0631.90Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_76205 PE=4 SV=1[more]
tr|A0A2P4JYI2|A0A2P4JYI2_QUESU5.4e-0531.90Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_07175 PE=4 SV=1[more]
tr|A0A2P4GRB6|A0A2P4GRB6_QUESU7.0e-0530.17Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_32964 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G021550.1CsGy1G021550.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G021550Watermelon (97103) v2cgybwmbB012
CsGy1G021550Watermelon (97103) v2cgybwmbB031
CsGy1G021550Watermelon (97103) v2cgybwmbB033
CsGy1G021550Wax gourdcgybwgoB026
CsGy1G021550Cucumber (Gy14) v2cgybcgybB038
CsGy1G021550Cucumber (Gy14) v2cgybcgybB043
CsGy1G021550Cucurbita maxima (Rimu)cgybcmaB062
CsGy1G021550Cucurbita maxima (Rimu)cgybcmaB094
CsGy1G021550Cucurbita maxima (Rimu)cgybcmaB127
CsGy1G021550Cucurbita maxima (Rimu)cgybcmaB141
CsGy1G021550Cucurbita moschata (Rifu)cgybcmoB059
CsGy1G021550Cucurbita moschata (Rifu)cgybcmoB089
CsGy1G021550Cucurbita moschata (Rifu)cgybcmoB117
CsGy1G021550Cucurbita moschata (Rifu)cgybcmoB132
CsGy1G021550Cucurbita pepo (Zucchini)cgybcpeB006
CsGy1G021550Cucurbita pepo (Zucchini)cgybcpeB022
CsGy1G021550Cucurbita pepo (Zucchini)cgybcpeB068
CsGy1G021550Cucurbita pepo (Zucchini)cgybcpeB079
CsGy1G021550Cucumber (Chinese Long) v2cgybcuB002
CsGy1G021550Cucumber (Chinese Long) v2cgybcuB043
CsGy1G021550Bottle gourd (USVL1VR-Ls)cgyblsiB028
CsGy1G021550Bottle gourd (USVL1VR-Ls)cgyblsiB013
CsGy1G021550Melon (DHL92) v3.5.1cgybmeB011
CsGy1G021550Melon (DHL92) v3.5.1cgybmeB075
CsGy1G021550Melon (DHL92) v3.6.1cgybmedB010
CsGy1G021550Melon (DHL92) v3.6.1cgybmedB030
CsGy1G021550Melon (DHL92) v3.6.1cgybmedB070
CsGy1G021550Watermelon (Charleston Gray)cgybwcgB024
CsGy1G021550Watermelon (Charleston Gray)cgybwcgB034
CsGy1G021550Watermelon (97103) v1cgybwmB011
CsGy1G021550Watermelon (97103) v1cgybwmB052
CsGy1G021550Wild cucumber (PI 183967)cgybcpiB002
CsGy1G021550Wild cucumber (PI 183967)cgybcpiB040
CsGy1G021550Silver-seed gourdcarcgybB0160
CsGy1G021550Silver-seed gourdcarcgybB0552
CsGy1G021550Silver-seed gourdcarcgybB0789
CsGy1G021550Silver-seed gourdcarcgybB0943
CsGy1G021550Cucumber (Chinese Long) v3cgybcucB001
CsGy1G021550Cucumber (Chinese Long) v3cgybcucB047
CsGy1G021550Cucumber (Chinese Long) v3cgybcucB053