CsGy1G019820 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G019820
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	protein MIS12 homolog
Location	Chr1 : 18665529 .. 18676412 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAAATATATTCTCCATGTCAAAGAAGAGAATATTGTATTAAACCAAGAACTACAAGCTTTGGAAAGGCAAACTGCTTCCAATAACTCCCATATCAGTCATTTCAACGAAGCATTACAATTATATGAGCTAAGCTCTGTGAATGACATGTTCCCAGGGTAATTAAGATGTGCTTAAATTCAATTTTTTCTTCCTGCTACTAGAAGAAAACAACCCTACAATGACAGTTATATATCTCAAAAAATGAATGGAAGAAAAAAAAACTGTCACGAAATATAAAATTTCGCGTTTTTGACGGGAAAATACGGAATTTTTCGGAAAACACTTTTCGCGACAGTTATTAAATGTCATAGAATGTTAGGGTTAAAAATTTTATTATTTTATATTTAAAAAATTAAAATTACATTTTTATTTTTTTAAAAAACCCAAATTCCCCAAATTTTTCCCCAAAATCCCCAAATTTTTCCCCAAAATCCCCAAAATTTTCCCCAAAATCCTCCTTCCATTCGTGTGCCCTAACTCTCCCCGAAATTTCTCCCAATTTCTCCCTCTCCTCCCGTCGGCGTTCTCCCATTTCTGACCGTCTGAAGTCCCGTCGGCACCACCACCCCCTCCTGGCCGTCCGTCGAAACCTTCTCCACCAACCCGTCGCCACCACCCCCGTCTTCTCCAAACGTCTCCAATCAACCCGAACCTTCAAATCGTGGGCGTCGGTCCTCACCCCTCCCAACCGCCGGTAAGCTTCTCTTCCTTATCTCTTTCTCTCTCTCTCTCTATGAAGTTCTTCGTTGTCTTCATTGGATTGTTTCTTGAGTTTGATTTTATCCCAATTTCAGTCATTAATCTTTGATTTTCTGTTATATGACCTTAATTTGTTCTTGCAAGCACATGATCTTATTTTGTGAATTTGATTTATGCTCAATTTGTGTTTTCTAACGGTTTGCTTCTCTTCAATTTTAATTTCTGAGTTAGCTTATTAGTCTAATTACTTGTACAATGTAAGCCAACGTACTTATACAAACCTACCCTAATCAACTAACTAAGGACAAACTATTGTTATAATTATTTGTCAACTAATTCCCTTCATCATTCATCATGTCTGGAAACGAAATTGTCCTTGAAATGTTTTAGAATAATTGGGGGTTGTTGAACCTAGTCCATAAGTTTCCTTCAAGAAAATTCCTAAATGGTTCGTAATAAATTATTAAGTACTTTGAGGATTATCTACCGTTTTGAAACTTTGAGTTTTAAAAGTTGTTGCCTATAATCTCTTTTGTAATCAGGTTTATTTCGAGGCCAACTTAGAACTCCACACAATGGACAAGTCATGGATGACCCAAAATAGGATGTCAAGAGAATATGATTTAGGAGTCGAAAGGTTCATTAAATTTGGGTTGAGTCATGCCAAAGGTCTTAATTCAATTAGATGTCCATGTTTGAATTGCGGCAATCGTTTACTTAAGGATGTCTCAACAGTTCGGTATCATCTGTATGCCAATGGAATTGATAAGAGTTACAAGGTATGGTTCTGGCATGGTGAAGAATTGAACTCAGATAACGTTGCCAACACGATGGAAACTACAGTGGATGAAACTGATGAAAACGACGATTTATTTAATACAATTAATATGGTACAATCTGTTCAAGAACAATCTTTTAATGCATCAAATACCTTCGACACTATGTTTGATGACGCGAAGAAACCCTTATACCCAGGATGTAAGAAATTCACAAAGTTATCTGGCCTCGTGAGATTGTATAACCTGAAGGTTAGGTATGGTTGGACGAATACTAGCTTCTCTGAATTGCTGTCCATAATAAGTGATCTATTACCTGATAACAATGAAATTTCATGTTCTTTGTACGAAGCGAAGAAAACACTTGGTGCCCTAGGACTGAGTTACCAAAAGATTGATGCATGCCCTAATGATTGTTGCTTGTACAGAAAAGAATATGAAAAGTTGACCAAGTGCCCTAAGTGTGGTTTGTCAAGGTGGAAGATCACTAAGAACTCAAAGAAGGAAAAAAGTGGTGTGGCTGCTAAGCAGATGTGGTACTTTCCAATAATTCCAAGATTTATAAGAATGTTCAAGAGATCTGAAAAATGCTAAGAACTTGCGTTGGCATGCGATAGATAGACAAGTTGATGGTGTTTTGAGACACCCGGCTGACACTCCATCATGGAGGTTGATAGACCACATGTGGCCAACCTTTGGGTCAGAACCGAGAAATCTCCGTTTGGGTTTGTCTACTGATGGAATTAACCCATTTGGAGATATGTCAACGACGTACAGTTGTTGGCCCATCATCACTACAACATACAACCTTCCACCATGGCTGTGTATGAGAAGAAAACATTTGATGCTGACAATGTTAATATCAGGTCCAAAGCAACCGGGGTACGATATCAATACGTACTTAGCACATTTAATTGATGATCTACAAACGTTGTGGACGGATGGAGTTCTTTGTTTTGATGCATATAAGGAAGAATATTTCACACTGCGGGCTGTCTTATTATGGACCATCAACGATTTTCCAGCATACGGTAATCTATGCGGTTTTAGTGTGAAAGGATACAAGGCTTGTCCAATATGTGGAGAGGAGACTACTTCTATAAGATTGCAACATGGAAAGAAAATGTCATACATGGGACACAGGAAGTATTTGCCAAGACATCATCCATACAGATTACAAAAAAAAAAAAAATTAATGGGAAGCAAGAGCATGGAATTCCTCCACAACCCTTGTCGGGCGAGGCCATGTACCTTAAGATGAAAGACATGATATTTTCATGTGGGAAGAAGTGTGGGAAGACTGTGCATAATGAAGGTGGCAATGACTATTGGAAAAGAAGACCTGCTTTTTTTCAACTACCATATTGGAAACACTTGCATGTGCGACACTGTTTAGACATAATGCATATTGAAAAAAATGTATGCATGAACATGGTGGGCACCTTACTTGATATACCAGGAAAAAGTAAGGATGGGATGAATACTAGACTTGACTTGGTTGAGATGAAAATTAGACCAGAATTGGCACCAACGTTTACTGGTAATAGAACTTATATCCTTGTGGCATGTTATACACTGTCAAAAGAAGAGAAGTATCGATTTTGCAAGACTTTGTCAGAAATTAAAGTTCCAGAAGGTTATTCAGCAAATATTAGTAGTCGTGTCTCTTTGGATGACTTAAAACTGACCGGCCTTAAGTCGCACGACTGTCATGTTTTAATGCAGCAACTGCTTCCAATTGCAATACGTTCAGTCCTACCGAAGAATGTGAGGTATACTATTAGTAGATTGTGCTTCTTCTTCAATGCGATTTGTGCCAAAAGTTTTTCTGTCTCAGATCTTGATTCACTTCAAGAAGATATAGTTCTGACTTTATGCAATCTTGAGAAGTATTTCCCACCATCGTTTTTTACAATCATGGTTCACCTTGTCGTTCATCTCGTTAGAGAAGTAAAGCTTTGTGGACCAGTATATTTGCGATGGATGTACCCATTTGAACGATGCATGAAAGTGTTGAAAAGTTATGTTCGCAGTAGAGCTCGACCGGAAGGATGCATTGCAGAAGCAAGCATATGCGAGGAGGCAGTTGAATTTTGTTCAGATTTTCTTTCTGGATTAGATCCTATTGGACTTGGGTCACTCAATTCAAGGACAGAAATACAAAGCGATCGACCGCTATCAGCAGGAACATACGTTCGACCCGATGTCCAACAACTCAAGCAAGCACATCTTCATGTCCTACAGAACATTGGAGAAGTGCACCCATACGTTGAGTAAGCATTCTTATGAGTATATACTGTCGTTTTGTTATCCTCAAGCCATCAATTTAATGTATGAAACATTTCGTAGGCAACATTTCAATCAATTAAAGATGGAAAATCGCAGAAGAGCAAAAAATGAACAGTGGCTACAAGTTGAACATAATCGATCCTTCAGTGCATGGTTTAGGGATCAGGTACATACCCAATCAAAAATTTATTTTCGTTTTATCTAATTGTTCAATATTTAGAACGACTAATTGTTCTATTCAATAGGTGATGAGTGAACTACAGGAAGGGAAGGTTCTCTCGAACACCATACGTTGGCTTGCACATGGACCCCACCCTGCTTTAATGATGTACGACGGATACATAATTAATGGAACGTCTTATCACACAAAATCTCGTGATGACTACTGAACGGTGCAAAACAGTGGGATTATGCTAGTCGCAACAACAATGCAAGTGTCAAGTGCGAAGGACAAAAACCCGGTCGTCTGTGACATGCCTTTCTATGGCACCATTCAAGAGATTTGGGAAGTCAACTACAATATGTTTAAGGTTGTTCTTTTCAAATGCAATTGGGTTGAAAATAATGCTGGTGTTCGAAAGGACGATCTGAACCACACACTGGTGGACCTTAGTCGAATTGGCCACTCTTCAGATTCGTTCATTATTGCCACACACGGAAGACAAGTATTCTATGTCACAGATCCTGTTGATCCAAGATGGTCGGTTGTTGTGATGCCACCCGAGAAGGACTTTCCCCACAAATGTGTTGATGATGACATAAGTGACATCTTGCCTCACTATCCCCCACTCTCTTCTTACCACACAACTTTTGATTATGACGAAGGTGGTGAAACATATGCTAGACCTGACTGTGAAGGCACATGGGTTACCAATTGACTATCCCCACAAATGAGTTAATCGTTATTGTTTTATTCTTCTTTGTAGGACTATTCCATTTTCAGAGATTACTACTTCAGAATGTACCGTTATCAAGTTTTCTTTTCATGTTCAATACTTTCTTTGTTTTCAAATTTCGGAGAAGTTTATGTAGTAGATGTTCTAATTCGAAAGTGTTATGTGCTTTACCATATTTAGTGTGAATTTTGCATAATTAAGTTTGTCTGAATTGTTTCCTATTTTCTTTGAGAAACAAGGGTTTATTAATGTTTAGTCATGTTAACACTTTTTTGGTTATTTCATATTTCACATTTACAATTAAATCACATGTATTATGTTTTAAATCACATGTATGTTTGTAGTAATGGTTCATTCAGATGATGATGAGGTTGCTACACCCATTCAAAGAGGGGAAACTAGTAGCGAGAAAAAGAAACGTGGCCCTACGGGAATGAAAGATATAACACGTTTTAGTAGTGAGGGACGGAGAATGGTTATTCAGTACAATGAACTTGGTCAACCGATTGGACCGAATGCAACGAAGTTGAAGAGTTTTATTGGAACGGCCGTAAGGTTTCACGTTCCTATCACGTACTCTACTTGGCATGTTGTTCCAATGGAGATGAAGGAAAAAATTTATGAATTGATTGAGGTAAAAATGCTTCTTACTGACTGTTTTTAGGTTAAACTACCAACTTCAACCCGTTTAATACATTTGATTTTTTTTTTTTTTTTGTAGGCCGGCTTCATTCTTGACCCCAAGTCAAAGAAAAGCATACTTCAAAACGCGGGAGTATGCTATCGTGGGTTCAAGTCGAGATTGACAACTACGTACGTACTTCCATTTAAGGACGATGTGAAGAAATTAAAGCACCCACCAGCGGAATACTCATTCATCGATCAAGACCATTGGGATGAATTTGTGGCTTCACGGTTGAAGGAAGATTTTGGAGTACGTATGGATATCCAAACATTTTCTTATACTTTATGTACAATTTGTTACACAAATATGTTAATTTAATAGAGGTTATACAACTTTTTCTACAGAAAAAAAAGTGCAGACGGTAAACTGAAAAGGAGCCTGTACAAATACAACCATAGAACATCTCGCAAGGGGTATGCAAATTTGGTTGAGGAGTTGGTAAGTAACTGCCCTTAAAGATGTTCTTTGTTTTCATGAGGTTAGATTCCAAATATAACATATACTGTTTATGTAGCGTGCATCTTCTTCGTCAGATCAAATAGATCGATCGATAGTATGGAAACATGCACGGTTGGATCGTAAGGGAGAGTTCCCAGATAAAGAGACGATGGACGTTGTCAATCTCATTGTAAGTTAACAAGTTGAGAAAATTTGCCAACTTATGATTTCCATGTTTTTTTGTTACTATGGTTTCACATCTTTTAATTTCCATTTCGTGCACTATTTTAGGACGATCTAATGGGCAACCAGAAGGGACGTAGTTTATCTGGTGGTGACGATGTTCTCACCCAGGCATTAGGAGGGAAAGATCGTCCGGGCATACTCCGAGGCGTGGGGAAGTACGTGACTAAGAAACAATATTTCCATACCCCGAACGAATGTAAAGAAGGTAATGAGGAGAGGACAGTGTATGAGGAACGTGATCAAATGGCGAAACGAATTATCGAGCTAGAAGCGGAGTTGCATAGAATGAAAAAAGATGAGTGTGCAAAAGGAGATGATGGAGAAGAAGACCCTAGTATGTGTTCGAAAGGAACACCATCAGTTCAAGGGGTTTCAGATGATGAGACTGAAGACGTTAAATCTGATTCAGTACCAGATAAAGCGGCTGATGTTGTGACAGAAGTGAAGAAAGAATAAAATGTGGGGGACACAAGATCAAGTGACTTGAAGGTCAGTTTAAAGTATACTTTAATAATTAAGGCACACTGCTCCACAACATCTCTATATACGTGTTTAATCTTGTAAGAAGTTTGACATAACCCTTAAAACGTATTTACTAACTTTACGTGCACATATTTAACATATAATTCTACGTAGGTTGGAACTCCGTGTATGCTTGCGTTTGAAACTGAAGATACTATCATTGCACATGGGACAATATTTGATGCTGAAGGTGACGGTGAGAACATCAAGGTATCAGTGGATGTTGTCCTCGATGGCGAATGTGTGATTCTAAATCAAACAAAGGAAGGAGTCACGAAACTGACGCATGAAGTCGGATCACATTTAATGTGGCCACGACATCTTGTTCTTACTAGGAATGATAAGGTAATTGTCTGTCTTATTGTGTTGGAGTTTTTATGCATCAAATTATACTAACAGTAGTGGAAATTTTTGTGATAGAAGGAAACTGTGGGCTTCAATACGGATCCGTCCACATTCTCCAGTGCAGCATATCTACGTGCTCCAGTGGCACTCTGGTGTTTGGTTAGACTCGTTGAACATATGGGGTCATCGATTCAACTAAACACGTCTTTAGAGCTATTCGGTGTGAAGAGAAAATGTTGCATTATGGTTGAGTCACTTAGGGATTTCTCGTCAATGCAGCCAATATGCACATCATGCCTAGATGCTTACATGATGTAAGATTTCCTTTTAGTATATATATGTCATTGATGGTTGCGGTCTCCTTTTAATTGTAATGACATTTCATTGTGTAGGTACCTTCACACAATTATGGTACAAGGACGAAGTTCAAGCTTGTTCAAGTTCATGGATGCCGGATCTGTAAGTTACTCGAGTTACAAACAATCGCGTGCGCAGTTGTTGAATGCTCGACTTCTCGGAGCCGAGTATGACCAAGTCGTATTGTTCCCATACAACTCAGGGTAAGCGCATGATAATGACATTTTCATTAACATTCACGATTTGAATTCACTATTTGTGTATAAATTTATAATGGTGGAAATGTGTTCTTAGCAATCACTGGACATTGGTCGTTGTTAATCCTACAAAGGGTGCTGCATATTGGATTGACCCGTTGAAGAATCGGATTGACGGAGACATGAGTGAAGTGCTTCAGATGTAGGTCATATTATTGTCGTTAATGTCTTTATTATGTGTGCAACTATTTTAATTATGTAACAATCTTATATTATGTGGTAGGACATTCGATATATCAAAGAAGAAAAAACCGAGTTGGAAGGTTGTTAAGGTATGTGGCATTGACCAGTATGGTAGTCGTAAATAAGTTATTATTTTAAACGTTTCACATGTATTTTTTGTATTCTACATCCAGTGTCCCAAACAAAATGGGGTGGTAGAATGCGAATACTATGTTATGCGATTCATGCGGGACATAATTTCTTCGAGGAGTACTTCAATTGTAGATGTCGTAAGTATTAGAGTTTTCGAACCACTTTATGTCATTGTTTGGAATGAAAATAATTCTTAACGACTTTATTATTTACAGATGAAAAGTTTACCTCGTACGTACTGTCAAGATGAAATCGATGAAGTTAGATCGGAATTGGCGGAGTTCCTTTCTAAGCACGATGTACGTGCTTAGCACCAGATTAGGAAACAACATTTTTTGAAGTATTTTGTGGGGTTTTTTGTTAATATAATTTTGTTAAACCCGAACGACACACAAGAAAATGTTAAGCGCATTCTTTTGAACAGACTTAAGCATGAAAGGGGTAAGTGAATGGTGATTTTATCACATCTAAGTATATGTGACTTGCTTTTAAGTAAGTGGATATGAATGTGTGTTTGCTTATATGTTTCTTAGGAAGAGTTCGATATATATGTGACTGGCTCATAGAATTTTGGTATTTGGTGCCATACTGCATTGGGATATGAATCTTCTTGCAATCAAATAACTGCTGAAGGTGATTATTTGCTTGTGTCCTTGGTTCACTACCTTTGAATGTTTAATATATGGATTGGGGATTAGAGATGTATATTTTTGCAATGTGCTGTCTAATTGGTTTTTGTAATTCAGTACTGCGGTCTTCCAAAATATGGACAGCTTTGTCATACACATGGGATAATGCTGGGCACTTCATTCAAGTAAGACGGTATAGACCTACATTGTCGCAAACCAACAATGAATGGTATGTCAATACCTGTAGCACTTTTTTTGTTCCTGAACCTGAGTAGTTGCTGTAATCTTCCTATTCGTTTTAATAATTTGAGAGAATTGGTACATGATTATTCATAGTTCATCTTTATTGGCGATGATTGCATAATACAAACTGTTCAACTCTAAGGATTACAAATTGTCGTACATGTATTGTCGTAGGCTGTTTTGTTCTAAGGACTAGGAATAACCCAAGAAGTTGTTCAATTTGCAGTGGCCATTTGGTTGGACGTTCTTCTTCTCCTTGATAGAGAATGGGAGAGTGAGATGGGGTATGTTTTTGGTATGTGTATTCTAGAGAGAAAGAGTAGCAGTATGTTTTTGTTTGCTGTGTTTGCCTAATGTAGTCCTCATGGTCTTCTCTTTTCATTTCATGGAATCAAGTGTTGAAGTTCTTGTTTATGTTCTGTATTTTGTTGAGACATTGATTTAGTTATTGATTGACTGTGTATGTGTTATGGATACTTATATTCAGGTTGTCTTTGTAGGTTCAACTGGAGTGGACAACTTCAAATATCATTTCCAGAAACGAACATTCTCGGTTGGTCTAGTCAAATATATTCGAATGCTATTTAAAATATTTTTTGATTAAGGCCTAGTATTTTGTACATGTGGATTATTGAAACTTGTATTAAGATGTACAAATATTATAAATCGTATTATAGTGTATATATATTAAAGTGTTGGCTATTTTTTTGTACATTGGTGTGAAACTTGTATAATTTCAAAATTGTCATTCTCAGCTACATTATTGTCAATCTAATGGTTCGTGTAATGGTGGAGCTGCATGGAGAACAGGAAAAAACTATAGGAAATTGAGAAATGTGGAACAGGAAATAAATGACGTAACAAAAGAATTTGTGATAGTTAATAGTTGTTGTAAATTGGAGAACGATGACAGTTATTTAACAAAATAAATTGTCACGATTGCTCTATATGTGACAGGAATAACATGTCGTCATAAGATAAACAATGACAATTTTTTTTCAAAAAAAACTGTCACGATTGCATTATATTTGACTGAAAAAAAATATCGTCAATGGCAAAACAATGACATTTAATGTTATCGAAAAACTGTTACGATTGCACAATCGTTGACTGGAAAAAAATGTCGTCAATAACTAAACAATGACATTTTTACAAAAAAAACTGTCGCAAAAAACATATTCATGACAATTAATACATGTCACAATAATAGAATTCGTGACAATTATTTAACTGTCGTTAATAAAGAAATGATGATAGTTATTAAATGTCATAAAATAGATTATGACAGTTATTGAATGTCGTTGAATGTTGATTAACGACATTTATTTCATGTCATAAAATAACCTATTGCGACAGTTTTCAAAAACTGTCGTCGAAGGCCTTTCCATGACTCCCGCTTCTATGACTGAAAATAATTGTCGCGAAATCCATTCACGACAGTAAATAACTGTCGTCGTAGACCACTTTTGTACTAGTGTGCACTCCTGGGTTTACATGCACACTACTCTACACGTACACTCATGAAAGGGTATCCTCGAAATGAAATATACAAATAATGTTCTCCTCCAGCAGATCATCCTGGTTTGCGTATCTCGTGCTGACACAAACTCTAATAGTTCCAAATGACACTTAACACCTGTAAAATCATTCCATTTAGGAGCTTCTTGGAGTATGTGAATAATTAAGGCAACTTCTCTTGCTATTTTCATTTTGAATGCCACTTGGACAGAATTTATTATTTAGTTATTAAATTTCGTTGTACTGAAACTTCAACTGTCGGCAGGTATATATAAAAGTTATTCATTATTGTAGGAAGCAGAATTTTAACATGTATTGATTTCTTTCAGAAATTATCAGAACTGCATCGGAGCTTCGTGCGAAAATAGGAAAGCTGAAGAAAAGGAGGACGGAGGAAACCAAGCTCGCTAAAGTAGAGAAGGTTCATACAAATGGAGACATCTCTCACCATCACAATGGTAGGATTTTCAAGCTACTTTATTATCAATGAAGCTGCTTTTAGCTTTTCTGAAGCTGAATATCATATCTCACATGCTCGTTGATGCTTGTTTCTGTTGTGCAGGTTTCTCTAATGCTAAGCTGGATGATATTCAAGAATTTTTATCTGGTTTGAAGAAGATTTGA

mRNA sequence

ATGAGGAAATATATTCTCCATGTCAAAGAAGAGAATATTGTATTAAACCAAGAACTACAAGCTTTGGAAAGGCAAACTGCTTCCAATAACTCCCATATCAGTCATTTCAACGAAGCATTACAATTATATGAGCTAAGCTCTTTATTAAATTTCGTTGTACTGAAACTTCAACTGTCGGCAGAAATTATCAGAACTGCATCGGAGCTTCGTGCGAAAATAGGAAAGCTGAAGAAAAGGAGGACGGAGGAAACCAAGCTCGCTAAAGTAGAGAAGGTTCATACAAATGGAGACATCTCTCACCATCACAATGGTTTCTCTAATGCTAAGCTGGATGATATTCAAGAATTTTTATCTGGTTTGAAGAAGATTTGA

Coding sequence (CDS)

ATGAGGAAATATATTCTCCATGTCAAAGAAGAGAATATTGTATTAAACCAAGAACTACAAGCTTTGGAAAGGCAAACTGCTTCCAATAACTCCCATATCAGTCATTTCAACGAAGCATTACAATTATATGAGCTAAGCTCTTTATTAAATTTCGTTGTACTGAAACTTCAACTGTCGGCAGAAATTATCAGAACTGCATCGGAGCTTCGTGCGAAAATAGGAAAGCTGAAGAAAAGGAGGACGGAGGAAACCAAGCTCGCTAAAGTAGAGAAGGTTCATACAAATGGAGACATCTCTCACCATCACAATGGTTTCTCTAATGCTAAGCTGGATGATATTCAAGAATTTTTATCTGGTTTGAAGAAGATTTGA

Protein sequence

MRKYILHVKEENIVLNQELQALERQTASNNSHISHFNEALQLYELSSLLNFVVLKLQLSAEIIRTASELRAKIGKLKKRRTEETKLAKVEKVHTNGDISHHHNGFSNAKLDDIQEFLSGLKKI

Homology

[Close]

BLAST of CsGy1G019820 vs. NCBI nr
Match: XP_004138204.2 (PREDICTED: uncharacterized protein LOC101210006 [Cucumis sativus] >KGN63748.1 hypothetical protein Csa_1G014450 [Cucumis sativus])

HSP 1 Score: 164.5 bits (415), Expect = 2.3e-37
Identity = 94/123 (76.42%), Postives = 103/123 (83.74%), Query Frame = 0


Query: 1   MRKYILHVKEENIVLNQELQALERQTASNNSHISHFNEALQLYELSSLLNFVVLKLQLSA 60
           +R  +  V++ENIVLNQELQALERQTAS+NS ISHFNEALQLYE SS+ +       +  
Sbjct: 124 LRNKLSEVRKENIVLNQELQALERQTASSNSQISHFNEALQLYEQSSVND-------MFQ 183

Query: 61  EIIRTASELRAKIGKLKKRRTEETKLAKVEKVHTNGDISHHHNGFSNAKLDDIQEFLSGL 120
           E+IRTASELR KIGKLKK RTEETKLA VEKVHTNGDISHHH GFSNAKLDDIQEFLSGL
Sbjct: 184 EMIRTASELRVKIGKLKK-RTEETKLAIVEKVHTNGDISHHHKGFSNAKLDDIQEFLSGL 238

Query: 121 KKI 124
           KKI
Sbjct: 244 KKI 238

[Close]

BLAST of CsGy1G019820 vs. NCBI nr
Match: XP_022134693.1 (protein MIS12 homolog [Momordica charantia])

HSP 1 Score: 155.6 bits (392), Expect = 1.1e-34
Identity = 84/123 (68.29%), Postives = 100/123 (81.30%), Query Frame = 0


Query: 1   MRKYILHVKEENIVLNQELQALERQTASNNSHISHFNEALQLYELSSLLNFVVLKLQLSA 60
           +R  +  V+EEN+VLNQELQALERQTAS+NS I+HFNEAL+LYE +S+        +   
Sbjct: 126 LRNRLSEVREENVVLNQELQALERQTASSNSQINHFNEALELYEETSV-------NERFQ 185

Query: 61  EIIRTASELRAKIGKLKKRRTEETKLAKVEKVHTNGDISHHHNGFSNAKLDDIQEFLSGL 120
           E++ TASELRAKIGKLKKRR EE+KL KVEKVHTNGD+SHHH GFSNAKLDDIQEFL+ L
Sbjct: 186 EVMNTASELRAKIGKLKKRRIEESKLTKVEKVHTNGDMSHHHKGFSNAKLDDIQEFLADL 241

Query: 121 KKI 124
           K +
Sbjct: 246 KTL 241

[Close]

BLAST of CsGy1G019820 vs. NCBI nr
Match: XP_023515498.1 (protein MIS12 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 154.1 bits (388), Expect = 3.2e-34
Identity = 83/123 (67.48%), Postives = 99/123 (80.49%), Query Frame = 0


Query: 1   MRKYILHVKEENIVLNQELQALERQTASNNSHISHFNEALQLYELSSLLNFVVLKLQLSA 60
           +R  +  V++EN+VLNQELQALERQTAS+NS ++ FNEALQLYE +S      +     A
Sbjct: 126 LRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNS------VNEMFQA 185

Query: 61  EIIRTASELRAKIGKLKKRRTEETKLAKVEKVHTNGDISHHHNGFSNAKLDDIQEFLSGL 120
           E++ TASELRAKIGKLKKRR EE+KL KVEK+HTNGDISHHH GFSNAKLDDIQEFL+ L
Sbjct: 186 EMMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADL 242

Query: 121 KKI 124
           K +
Sbjct: 246 KTL 242

[Close]

BLAST of CsGy1G019820 vs. NCBI nr
Match: XP_022988477.1 (protein MIS12 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 153.3 bits (386), Expect = 5.4e-34
Identity = 84/123 (68.29%), Postives = 99/123 (80.49%), Query Frame = 0


Query: 1   MRKYILHVKEENIVLNQELQALERQTASNNSHISHFNEALQLYELSSLLNFVVLKLQLSA 60
           +RK +  V++ENIVLNQELQALERQTAS+NS ++ FNEALQLYE +S      +     A
Sbjct: 126 LRKNLSEVRKENIVLNQELQALERQTASSNSQVNRFNEALQLYEQNS------VNEMFQA 185

Query: 61  EIIRTASELRAKIGKLKKRRTEETKLAKVEKVHTNGDISHHHNGFSNAKLDDIQEFLSGL 120
           E++ TASELRAKIGKLKKRR EE+KL KVEK+HTN DISHHH GFSNAKLDDIQEFL+ L
Sbjct: 186 EMMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNRDISHHHKGFSNAKLDDIQEFLADL 242

Query: 121 KKI 124
           K +
Sbjct: 246 KTL 242

[Close]

BLAST of CsGy1G019820 vs. NCBI nr
Match: XP_023515499.1 (protein MIS12 homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 152.9 bits (385), Expect = 7.0e-34
Identity = 82/123 (66.67%), Postives = 100/123 (81.30%), Query Frame = 0


Query: 1   MRKYILHVKEENIVLNQELQALERQTASNNSHISHFNEALQLYELSSLLNFVVLKLQLSA 60
           +R  +  V++EN+VLNQELQALERQTAS+NS ++ FNEALQLYE +S+        ++  
Sbjct: 126 LRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSV-------NEMFQ 185

Query: 61  EIIRTASELRAKIGKLKKRRTEETKLAKVEKVHTNGDISHHHNGFSNAKLDDIQEFLSGL 120
           E++ TASELRAKIGKLKKRR EE+KL KVEK+HTNGDISHHH GFSNAKLDDIQEFL+ L
Sbjct: 186 EMMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADL 241

Query: 121 KKI 124
           K +
Sbjct: 246 KTL 241

[Close]

BLAST of CsGy1G019820 vs. TAIR10
Match: AT5G35520.1 (minichromosome instability 12 (mis12)-like)

HSP 1 Score: 56.2 bits (134), Expect = 1.6e-08
Identity = 41/120 (34.17%), Postives = 71/120 (59.17%), Query Frame = 0


Query: 8   VKEENIVLNQELQALERQTASNNSHISHFNEALQLYELSSLLNFVVLKLQLSAEIIRTAS 67
           V + ++ L+ ELQALER + S    +   NEAL+LY+ SS+        ++  E+ + AS
Sbjct: 132 VGKRSVELDSELQALERSSVSRERSLRLVNEALELYDESSM-------DEIFKEMTKMAS 191

Query: 68  ELRAKIGKLKKRRTEETKLAKVEKVHTNGDISHHHNGFS----NAKLDDIQEFLSGLKKI 124
           ELRA + +LK RR + ++ AKV++      + +H   FS    + KL+D+++F + L+K+
Sbjct: 192 ELRASVERLKTRRMKASESAKVKR------LKNHGKEFSAMTFDGKLEDLEKFQAELRKM 238

[Close]

BLAST of CsGy1G019820 vs. Swiss-Prot
Match: sp|Q2V0Z5|MIS12_ARATH (Protein MIS12 homolog OS=Arabidopsis thaliana OX=3702 GN=MIS12 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.9e-07
Identity = 41/120 (34.17%), Postives = 71/120 (59.17%), Query Frame = 0


Query: 8   VKEENIVLNQELQALERQTASNNSHISHFNEALQLYELSSLLNFVVLKLQLSAEIIRTAS 67
           V + ++ L+ ELQALER + S    +   NEAL+LY+ SS+        ++  E+ + AS
Sbjct: 132 VGKRSVELDSELQALERSSVSRERSLRLVNEALELYDESSM-------DEIFKEMTKMAS 191

Query: 68  ELRAKIGKLKKRRTEETKLAKVEKVHTNGDISHHHNGFS----NAKLDDIQEFLSGLKKI 124
           ELRA + +LK RR + ++ AKV++      + +H   FS    + KL+D+++F + L+K+
Sbjct: 192 ELRASVERLKTRRMKASESAKVKR------LKNHGKEFSAMTFDGKLEDLEKFQAELRKM 238

[Close]

BLAST of CsGy1G019820 vs. TrEMBL
Match: tr|A0A0A0LPL2|A0A0A0LPL2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014450 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.5e-37
Identity = 94/123 (76.42%), Postives = 103/123 (83.74%), Query Frame = 0


Query: 1   MRKYILHVKEENIVLNQELQALERQTASNNSHISHFNEALQLYELSSLLNFVVLKLQLSA 60
           +R  +  V++ENIVLNQELQALERQTAS+NS ISHFNEALQLYE SS+ +       +  
Sbjct: 124 LRNKLSEVRKENIVLNQELQALERQTASSNSQISHFNEALQLYEQSSVND-------MFQ 183

Query: 61  EIIRTASELRAKIGKLKKRRTEETKLAKVEKVHTNGDISHHHNGFSNAKLDDIQEFLSGL 120
           E+IRTASELR KIGKLKK RTEETKLA VEKVHTNGDISHHH GFSNAKLDDIQEFLSGL
Sbjct: 184 EMIRTASELRVKIGKLKK-RTEETKLAIVEKVHTNGDISHHHKGFSNAKLDDIQEFLSGL 238

Query: 121 KKI 124
           KKI
Sbjct: 244 KKI 238

[Close]

BLAST of CsGy1G019820 vs. TrEMBL
Match: tr|A0A2P4I0I6|A0A2P4I0I6_QUESU (Protein mis12 like OS=Quercus suber OX=58331 GN=CFP56_39610 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.7e-13
Identity = 56/125 (44.80%), Postives = 78/125 (62.40%), Query Frame = 0


Query: 1   MRKYILHVKEENIVLNQELQALERQTASNNSHISHFNEALQLYELSSLLNFVVLKLQLSA 60
           +R  +  V +E+ VLN ELQA +RQ+ S+N  +   NEALQLYE +S+ N       L  
Sbjct: 136 LRNKLTAVGKESAVLNHELQAFKRQSTSSNHCVGVVNEALQLYEQNSMHN-------LFQ 195

Query: 61  EIIRTASELRAKIGKLKKRRTEETKLAKVEKVHT-NGDISH-HHNGFSNAKLDDIQEFLS 120
           E+ RTASELR ++ KLK R  EET+  K  +++  N D+S     GFSNA L++IQEFL 
Sbjct: 196 EMERTASELRTRMVKLKTRGKEETEYTKTGRIYNPNRDLSKIDSKGFSNASLEEIQEFLD 253

Query: 121 GLKKI 124
            +K +
Sbjct: 256 EMKSL 253

[Close]

BLAST of CsGy1G019820 vs. TrEMBL
Match: tr|A0A2P6P3E6|A0A2P6P3E6_ROSCH (Putative centromere protein Mis12 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0184161 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.2e-12
Identity = 50/124 (40.32%), Postives = 76/124 (61.29%), Query Frame = 0


Query: 1   MRKYILHVKEENIVLNQELQALERQTASNNSHISHFNEALQLYELSSLLNFVVLKLQLSA 60
           +R  +  V EE+  LN+ELQ LE+Q+AS+N      NE LQLY+ SS         ++  
Sbjct: 126 LRNKLTKVGEESAALNRELQLLEQQSASSNRLSVLVNETLQLYDRSSF-------HEMFQ 185

Query: 61  EIIRTASELRAKIGKLKKRRTEETKLAKVEKVHT---NGDISHHHNGFSNAKLDDIQEFL 120
           E+++T+S+LR K  KLK R+ EE K  K++K++    +  + +  NG S AKL+D+QEFL
Sbjct: 186 EMVKTSSQLRMKTAKLKTRKAEEAKQNKIDKIYNRYRDSSVMNDSNGLSGAKLEDLQEFL 242

Query: 121 SGLK 122
             +K
Sbjct: 246 DNMK 242

[Close]

BLAST of CsGy1G019820 vs. TrEMBL
Match: tr|M5WEK5|M5WEK5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa020456mg PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.0e-12
Identity = 52/126 (41.27%), Postives = 82/126 (65.08%), Query Frame = 0


Query: 1   MRKYILHVKEENIVLNQELQALERQTASNNSHISHFNEALQLYELSSLLNFVVLKLQLSA 60
           +R  +  V +E+  LN+ELQ+LERQ+ASN+ HIS  +E   LY+ +S         ++  
Sbjct: 126 LRNNLTKVGQESAALNRELQSLERQSASND-HISALDEISLLYDQNSY-------HEMFQ 185

Query: 61  EIIRTASELRAKIGKLKKRRTEETKLAKVEKV---HTNGDISHHHNGFSNAKLDDIQEFL 120
           E+++TASELR KIGKLK R+ EET+  K +K+   H +  +     GFS+A+L+D++EFL
Sbjct: 186 EMMKTASELRTKIGKLKTRKIEETEHNKADKIYNPHRDPSMMGIGKGFSDAELEDLREFL 243

Query: 121 SGLKKI 124
           + +K +
Sbjct: 246 ANIKNM 243

[Close]

BLAST of CsGy1G019820 vs. TrEMBL
Match: tr|A0A2C9WH35|A0A2C9WH35_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G023400 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 6.5e-12
Identity = 52/124 (41.94%), Postives = 78/124 (62.90%), Query Frame = 0


Query: 1   MRKYILHVKEENIVLNQELQALERQTASNNSHISHFNEALQLYELSSLLNFVVLKLQLSA 60
           +R  +  + +E+  +N+E+QALERQ+ASN+S  +  NEA QLYE +S  + +        
Sbjct: 125 LRDRLTSIVKESSDMNREIQALERQSASNDSCAALLNEAFQLYEQNSAHDML-------E 184

Query: 61  EIIRTASELRAKIGKLKKRRTEETKLAKVEK-VHTNGDISHHHNGFSNAKLDDIQEFLSG 120
           E++RTASELR KI  L+ RR E+    + ++    N D+    +G S+AKL+D+QEFL  
Sbjct: 185 EMVRTASELRTKIENLRTRRIEDADHLRTKRFCDPNRDLLTSTHGLSSAKLEDLQEFLGD 241

Query: 121 LKKI 124
           LKKI
Sbjct: 245 LKKI 241

The following BLAST results are available for this feature:

BLAST of CsGy1G019820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138204.2	2.3e-37	76.42	PREDICTED: uncharacterized protein LOC101210006 [Cucumis sativus] >KGN63748.1 hy...	[more]
XP_022134693.1	1.1e-34	68.29	protein MIS12 homolog [Momordica charantia]	[more]
XP_023515498.1	3.2e-34	67.48	protein MIS12 homolog isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022988477.1	5.4e-34	68.29	protein MIS12 homolog isoform X1 [Cucurbita maxima]	[more]
XP_023515499.1	7.0e-34	66.67	protein MIS12 homolog isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy1G019820 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G35520.1	1.6e-08	34.17	minichromosome instability 12 (mis12)-like	[more]

BLAST of CsGy1G019820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q2V0Z5\|MIS12_ARATH	2.9e-07	34.17	Protein MIS12 homolog OS=Arabidopsis thaliana OX=3702 GN=MIS12 PE=3 SV=1	[more]

BLAST of CsGy1G019820 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LPL2\|A0A0A0LPL2_CUCSA	1.5e-37	76.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014450 PE=4 SV=1	[more]
tr\|A0A2P4I0I6\|A0A2P4I0I6_QUESU	7.7e-13	44.80	Protein mis12 like OS=Quercus suber OX=58331 GN=CFP56_39610 PE=4 SV=1	[more]
tr\|A0A2P6P3E6\|A0A2P6P3E6_ROSCH	2.2e-12	40.32	Putative centromere protein Mis12 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g01...	[more]
tr\|M5WEK5\|M5WEK5_PRUPE	5.0e-12	41.27	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa020456mg PE=4 SV=1	[more]
tr\|A0A2C9WH35\|A0A2C9WH35_MANES	6.5e-12	41.94	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G023400 PE=4 SV=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000278	mitotic cell cycle
cellular_component	GO:0000775	chromosome, centromeric region
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G019820.1	CsGy1G019820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 5..25

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G019820	Wax gourd	cgybwgoB095
CsGy1G019820	Cucumber (Gy14) v2	cgybcgybB014
CsGy1G019820	Cucurbita maxima (Rimu)	cgybcmaB015
CsGy1G019820	Cucurbita maxima (Rimu)	cgybcmaB041
CsGy1G019820	Cucurbita moschata (Rifu)	cgybcmoB015
CsGy1G019820	Cucurbita moschata (Rifu)	cgybcmoB038
CsGy1G019820	Cucurbita pepo (Zucchini)	cgybcpeB042
CsGy1G019820	Cucurbita pepo (Zucchini)	cgybcpeB110
CsGy1G019820	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G019820	Bottle gourd (USVL1VR-Ls)	cgyblsiB061
CsGy1G019820	Melon (DHL92) v3.5.1	cgybmeB039
CsGy1G019820	Melon (DHL92) v3.6.1	cgybmedB033
CsGy1G019820	Watermelon (Charleston Gray)	cgybwcgB064
CsGy1G019820	Watermelon (97103) v1	cgybwmB080
CsGy1G019820	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G019820	Silver-seed gourd	carcgybB0779
CsGy1G019820	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G019820	Cucumber (Chinese Long) v3	cgybcucB023
CsGy1G019820	Watermelon (97103) v2	cgybwmbB064