CsGy1G019530 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G019530
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptioncarboxyl-terminal-processing peptidase 1, chloroplastic
LocationChr1 : 18391622 .. 18394747 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATTTTGATAGGTTTGTTTGATTATGGATATTCAAGTAGAATGGAAATTAAATTTCATCAATCCAACATCATAAACAAAAATATATCAATATAGTAAACAAAATACCTTTTGTTTAATGGATCCTGAAAGATTAGTAACAGGCTTGAAAGATGACTCCACCCTGAAAAATTGTACAGGAAAAAAATTGCATGATACAAAAATTGAATGCAAAAAATATATGGACAAAACCATGGAAAACAAAAGAGAATTTTCGAAGGAGAACTGATCCAACCTAAAGTAAAGTAGTAAGAAAACAACGCATCAATTTTTATGATTTCTACTTTCTTTTTCAGATTGTTTTTCATCATCTGAATTTAATCCACTACTACAAAAACAGGCTCTCTTGACGTTTTTAAACTGTCAAGAGAAGGCTCTCTTGACGGTTTTAAAACCGTCGTTGAAGCCAGCGTCAAGAAAGGCAAAGTTCTGGACAGTTGATTAAACGTCAAGAATAGTGAACGTTGACGTTTTATAAACGTCAAGTATAGTTATGTTCATGACGTTTTAGAACCGTCAAGACTGGTATTGTTTATGACATTTTAAAACCGTCAAGGATGAACTGATTTATGACATTTTAAACCCGTCAAGAATTTTAATATTCATGACATTTTAAAACTGTCAAGAATGTAATTGTTCTTGACATTTGTCAACCGTCAAAAATGCAATTGTTCATGACAGTTTAAAACCGTCAAGCTTGCAATTGTTCATGACATTTTAAAACCGTCAAGCATTTTTTATTTTTTTTAAAAAAAAGAAATTGTAATTGAATTATGCTGTAATTGAAAGAAATATATTCTGATTGTCCTGTAATTGTCCAACAACAGTTTCATAGATATTTAATATTCATCAAATATAGTTTCAAATCTCAAACATATATAAATAAAACCATTCACCATATATATTCAATTCGAAGACTTTACATATACATAATGAAATAAATTTTAGCTATAACAATAATCAAAAGTATATACGAATGAACCCCCCCCCCCCCCCCCTCCTCCATATGAACAATTCAAAAGAATTATCGGCTAAAGTTTTTATACATAAAGTTTAGGGTCATAAAGAAGCGACACAACAAAAAATTTCCTACTTCATAATAATAAAATATTGGTCATAATCATATGTAAGAACCCAAAAAGTCAGCTAACTCGACTCGCACCTCGTCTAGTTCTGCCTGTGAGTATGATCTTCGTGTATCAATCTATAAACATGCAAAATAAATTAAATGAATTAACTAACTATACAAATAAACAAATTAACTCACAAAACCAATAGTTTGATATATAACATATCGCATCGGATATGACAATGCTTCCCCTAGTCACAATTTCTCTCATATACCTCATCACGTAGTATCCACACTCAGTACTCCCGACTTGTAGTGAACACTATATAAAAACAACAAATTTGAATAACAAAGTAATCCTAATTGTTAGTAGTCTACAAAAATATAATGACTTTAAAAGTTGATACTTGCCTTTACTGTTACTCTCCCCATTCGTGCACCACCACCTCCAATCGTCTATTGACAATTTTTGTTTGTCTTCCCCGTTCGTGCGCCACCAAATCCTCGTCTTTCCCTCATCTGTTGCCTTAGACTTTTCGACTGTGGATTTTCTCTCTTTATCATCTGATTCTTTGCCCTCTTCCTTACAATTTGATTCATCTGCATCTTGTATTGATGAAGACAAGCTACATGAATTTGAAAGCTCTGAGATTGTGTCCTCGCGGTAACTAACGAGGATATCGTTCTGGAGGGTTGGGAAATTGTAAATAATAGCTTGGAAGCTTGGAAGGTATGAATTCCCCTATGCCCTCGCCCACTTGGGCAAGATTTTATACCATGTTTTTTTTAGCATGCTGTGAATTATAGTGTAAAGAACAAATGCTTGTTTCATATGTATACTCTGTTAAGTACAAGGAATAGTTGGGATCATTGTTTAAGCTAACGACATAACTCAATCGTCAAACCCCTTCTACAAATGTTGGAGCATGTGGTTCATGCTCCTCATCTCCTATTAACAATGTCGTTGTTGTAAAGAACACGACTGCTTCTACTACTATCTCTCAGTTGAATTTTTTCAGCACCTTATCCACCAGCCAATACTCTAAACTTATGGAGATGTTATCCACTCATCTCATGCTTCAAAATCTAAGATAGTGATTGCTTTTATTCTTGCTCACACTACAAGTATTTGTTCATTACCTTCTGCCTCATTTAACTTGACCAAAAATTCAGAATATGAATTTTTTGGTGTTGCACAACACATAATATGTTTTTCTCAAGCATTGATGCATAGTTAATTGTCGATCTATTTTTATATTACTGTGTGATACTTCTCAATATAACAGTCGCGTTCATGTGAACTTTATCAAAGTTGTACAACTTTCATAATACTTGAAGCTTTATGTGCTGTGTTATTCATTCCACAGTTAATTCAATATAATCTAATATCAATTAGTTGCTTGTTACATGATGGTTCTTTTGTTCTTTACAATTCTCTAACATTGATTGTGTTATACATAACAATTCAAGTTTGAGAATGATTGACAGCGTTAGATGCTGTAATGGATCATATTTATTTATTTAATGCCCCCTTCAGTTGGTAACCTCTTTAATACTATTATTTCTTTTCAAGCATTTTCATTTAGGACATCTTTCTTCTAAAAATTTGTCCATATTAAATGATACTTTACATCAGTCCTCTTGTGATATATGTCCCCTTGCTAAACAAAAATGTTTGATTTTCCATTGAAATAAAAAAAAGTCTCTCTTAATACTTTTGATCTTGTTCATTGTGATACTTGTGACCGTAAACGAAATCCATGGAAGGTATTGAGAAATTGATGTGTATTTGTGAACTAAATCACTTGTTAGTTGTCTTAACTCGTATATATACGTATATGTATACAAATTTTTGAAATTCTACTCAAGTAAACAATTGTTGAGAATGTTGTTACACGTATGGCTCAATGAGCATATCCATTGGTGCATTCAGCAAATGTAAGAAGACACTAATATATATTTCAATTCAAACTCGATCGCTCACAATATCATCAAGAGAATGTTGGCCAGCTTAG

mRNA sequence

ATGGCCATTTTGATAGACTTTTCGACTGTGGATTTTCTCTCTTTATCATCTGATTCTTTGCCCTCTTCCTTACAATTTGATTCATCTGCATCTTGTATTGATGAAGACAAGCTACATGAATTTGAAAGCTCTGAGATTGTGTCCTCGCGCAAATGTAAGAAGACACTAATATATATTTCAATTCAAACTCGATCGCTCACAATATCATCAAGAGAATGTTGGCCAGCTTAG

Coding sequence (CDS)

ATGGCCATTTTGATAGACTTTTCGACTGTGGATTTTCTCTCTTTATCATCTGATTCTTTGCCCTCTTCCTTACAATTTGATTCATCTGCATCTTGTATTGATGAAGACAAGCTACATGAATTTGAAAGCTCTGAGATTGTGTCCTCGCGCAAATGTAAGAAGACACTAATATATATTTCAATTCAAACTCGATCGCTCACAATATCATCAAGAGAATGTTGGCCAGCTTAG

Protein sequence

MAILIDFSTVDFLSLSSDSLPSSLQFDSSASCIDEDKLHEFESSEIVSSRKCKKTLIYISIQTRSLTISSRECWPA
Homology
[Close]
BLAST of CsGy1G019530 vs. NCBI nr
Match: XP_008443944.1 (PREDICTED: carboxyl-terminal-processing peptidase 1, chloroplastic [Cucumis melo])

HSP 1 Score: 60.1 bits (144), Expect = 3.8e-06
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 0 

Query: 2   AILIDFSTVDFLSLSSDSLPSSLQFDSSASCIDEDKLHEFESSE 46
           ++ +D S VDF SLSSDSLPSS  FDSS SC+DED+LHEF SSE
Sbjct: 70  SVALDHSAVDFFSLSSDSLPSSSLFDSSTSCLDEDQLHEFGSSE 113

[Close]
BLAST of CsGy1G019530 vs. TrEMBL
Match: tr|A0A1S3B8R9|A0A1S3B8R9_CUCME (carboxyl-terminal-processing peptidase 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487412 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.5e-06
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 0 

Query: 2   AILIDFSTVDFLSLSSDSLPSSLQFDSSASCIDEDKLHEFESSE 46
           ++ +D S VDF SLSSDSLPSS  FDSS SC+DED+LHEF SSE
Sbjct: 70  SVALDHSAVDFFSLSSDSLPSSSLFDSSTSCLDEDQLHEFGSSE 113

The following BLAST results are available for this feature:
BLAST of CsGy1G019530 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008443944.13.8e-0670.45PREDICTED: carboxyl-terminal-processing peptidase 1, chloroplastic [Cucumis melo... [more]
BLAST of CsGy1G019530 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G019530 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G019530 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B8R9|A0A1S3B8R9_CUCME2.5e-0670.45carboxyl-terminal-processing peptidase 1, chloroplastic OS=Cucumis melo OX=3656 ... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0008236 serine-type peptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G019530.1CsGy1G019530.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G019530Cucurbita maxima (Rimu)cgybcmaB020
CsGy1G019530Cucurbita maxima (Rimu)cgybcmaB044
CsGy1G019530Cucurbita moschata (Rifu)cgybcmoB020
CsGy1G019530Cucurbita moschata (Rifu)cgybcmoB041
CsGy1G019530Cucurbita pepo (Zucchini)cgybcpeB045
CsGy1G019530Cucurbita pepo (Zucchini)cgybcpeB113
CsGy1G019530Cucumber (Chinese Long) v2cgybcuB002
CsGy1G019530Bottle gourd (USVL1VR-Ls)cgyblsiB059
CsGy1G019530Melon (DHL92) v3.5.1cgybmeB053
CsGy1G019530Melon (DHL92) v3.6.1cgybmedB048
CsGy1G019530Watermelon (Charleston Gray)cgybwcgB067
CsGy1G019530Watermelon (97103) v1cgybwmB083
CsGy1G019530Wild cucumber (PI 183967)cgybcpiB002
CsGy1G019530Silver-seed gourdcarcgybB0038
CsGy1G019530Silver-seed gourdcarcgybB0134
CsGy1G019530Cucumber (Chinese Long) v3cgybcucB001
CsGy1G019530Watermelon (97103) v2cgybwmbB067
CsGy1G019530Wax gourdcgybwgoB097