CsGy1G019420 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G019420
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	transcriptional corepressor LEUNIG-like isoform X1
Location	Chr1 : 18205313 .. 18206192 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGATGCTCCGGGTGGTTTCCTTTTGGAATGGTGGTCTGTGTTCTGGGATTTATTTATTGCCCGCATAAACCCACAGCACTCAGAAGCTGCTACATCTTACATCAAGGTTCGTTTTCTATTTAGATTTTAGCTGAATTAGTTCCCCCTCCGAGTGTTCCATGAAGAGGAAGAATGCTGCATCAGACAAAATAGTTGACCAAAGTTGTCATGTTGCCACATCCCTTAATGCATGCAGCTTTCATGTATTGATATCTGTATCAGATTGGATAAGTATTTCTTGATAACTTGAGTTTATTTTGGATTCGACAGTCTCAGTTGCTGAAGGATGGAGATTTGCAGTTACAACAACAACATTATTTACAGAAGACTCAGCAGAGTTCTACTCCAATTGCTAATAGGCTTGTTTTGAACAATTCACTCAATATACAGAACCCTTCAGTTGCAAATGAAATGGCTGCAAAAATGTATGAGGAGAATTTTACACTCCCTATTCAAAGAGATACACTAGCCAATGTGCTCCCAAAGGTATTCTTGAAGATCTCAATGTAATTTAATTTTCGCCTTTTTCCTCGATATTCAAGTAAATGTTCTCGCAGAAAAGATTTCTCAAACATGTAAGCCAGCGTCCAGGCTCAATGTTTGGAGTATCTGCCATGAATGCTCAACCTCTGAGGTGTCTCTCGTAACATTTCGGGTCCTGCTATTTCTGTTTTATTCTTAAAGGTATACTTACTACTTTTAATTGTTTCATGTTTAATGTATGTGAACATTGGTTTTCTAGCCAGAGCCAAATATCTGGGTACAAGTCAACTAGTATCGATACTCAATACCAGAGTCAACAGCTTCCAGGGTCCAAAGTAATTATTAATCAACTATGA

mRNA sequence

TTTGATGCTCCGGGTGGTTTCCTTTTGGAATGGTGGTCTGTGTTCTGGGATTTATTTATTGCCCGCATAAACCCACAGCACTCAGAAGCTGCTACATCTTACATCAAGTCTCAGTTGCTGAAGGATGGAGATTTGCAGTTACAACAACAACATTATTTACAGAAGACTCAGCAGAGTTCTACTCCAATTGCTAATAGGCTTGTTTTGAACAATTCACTCAATATACAGAACCCTTCAGTTGCAAATGAAATGGCTGCAAAAATGTATGAGGAGAATTTTACACTCCCTATTCAAAGAGATACACTAGCCAATGTGCTCCCAAAGAAAAGATTTCTCAAACATGTAAGCCAGCGTCCAGGCTCAATGTTTGGAGTATCTGCCATGAATGCTCAACCTCTGAGCCAGAGCCAAATATCTGGGTACAAGTCAACTAGTATCGATACTCAATACCAGAGTCAACAGCTTCCAGGGTCCAAAGTAATTATTAATCAACTATGA

Coding sequence (CDS)

TTTGATGCTCCGGGTGGTTTCCTTTTGGAATGGTGGTCTGTGTTCTGGGATTTATTTATTGCCCGCATAAACCCACAGCACTCAGAAGCTGCTACATCTTACATCAAGTCTCAGTTGCTGAAGGATGGAGATTTGCAGTTACAACAACAACATTATTTACAGAAGACTCAGCAGAGTTCTACTCCAATTGCTAATAGGCTTGTTTTGAACAATTCACTCAATATACAGAACCCTTCAGTTGCAAATGAAATGGCTGCAAAAATGTATGAGGAGAATTTTACACTCCCTATTCAAAGAGATACACTAGCCAATGTGCTCCCAAAGAAAAGATTTCTCAAACATGTAAGCCAGCGTCCAGGCTCAATGTTTGGAGTATCTGCCATGAATGCTCAACCTCTGAGCCAGAGCCAAATATCTGGGTACAAGTCAACTAGTATCGATACTCAATACCAGAGTCAACAGCTTCCAGGGTCCAAAGTAATTATTAATCAACTATGA

Protein sequence

FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLLKDGDLQLQQQHYLQKTQQSSTPIANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQRPGSMFGVSAMNAQPLSQSQISGYKSTSIDTQYQSQQLPGSKVIINQL

Homology

[Close]

BLAST of CsGy1G019420 vs. NCBI nr
Match: KGN65390.1 (hypothetical protein Csa_1G403660 [Cucumis sativus])

HSP 1 Score: 316.2 bits (809), Expect = 6.4e-83
Identity = 159/165 (96.36%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLLKDGDLQLQQQHYLQKTQQSS 60
           FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLLKDGDLQLQQQHYLQKTQQSS
Sbjct: 42  FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLLKDGDLQLQQQHYLQKTQQSS 101

Query: 61  TPIANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQRPG 120
           TPIANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQRPG
Sbjct: 102 TPIANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQRPG 161

Query: 121 SMFGVSAMNAQPLSQSQISGYKSTSIDTQYQSQQLPGSKVIINQL 166
           SMFGVSAMNAQPLSQSQISGYKSTSIDTQYQSQQLPGSK +  ++
Sbjct: 162 SMFGVSAMNAQPLSQSQISGYKSTSIDTQYQSQQLPGSKKLKGEM 206

[Close]

BLAST of CsGy1G019420 vs. NCBI nr
Match: XP_011656566.1 (PREDICTED: transcriptional corepressor LEUNIG-like [Cucumis sativus])

HSP 1 Score: 316.2 bits (809), Expect = 6.4e-83
Identity = 159/165 (96.36%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLLKDGDLQLQQQHYLQKTQQSS 60
           FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLLKDGDLQLQQQHYLQKTQQSS
Sbjct: 47  FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLLKDGDLQLQQQHYLQKTQQSS 106

Query: 61  TPIANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQRPG 120
           TPIANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQRPG
Sbjct: 107 TPIANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQRPG 166

Query: 121 SMFGVSAMNAQPLSQSQISGYKSTSIDTQYQSQQLPGSKVIINQL 166
           SMFGVSAMNAQPLSQSQISGYKSTSIDTQYQSQQLPGSK +  ++
Sbjct: 167 SMFGVSAMNAQPLSQSQISGYKSTSIDTQYQSQQLPGSKKLKGEM 211

[Close]

BLAST of CsGy1G019420 vs. NCBI nr
Match: XP_016903010.1 (PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Cucumis melo])

HSP 1 Score: 294.3 bits (752), Expect = 2.6e-76
Identity = 148/164 (90.24%), Postives = 154/164 (93.90%), Query Frame = 0


Query: 1   FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLLKDGDLQLQQQHYLQKTQQSS 60
           FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQL+KDGDLQLQ+ +YLQKTQQS 
Sbjct: 56  FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLMKDGDLQLQEHYYLQKTQQSP 115

Query: 61  TPIANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQRPG 120
           TP ANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQ P 
Sbjct: 116 TPTANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQPPA 175

Query: 121 SMFGVSAMNAQPLSQSQISGYKSTSIDTQYQSQQLPGSKVIINQ 165
           SMFGVS+MNAQP+SQSQI   K TSIDTQYQ QQLPGSKVIIN+
Sbjct: 176 SMFGVSSMNAQPMSQSQIPADKLTSIDTQYQGQQLPGSKVIINK 219

[Close]

BLAST of CsGy1G019420 vs. NCBI nr
Match: XP_016903013.1 (PREDICTED: transcriptional corepressor LEUNIG-like isoform X3 [Cucumis melo])

HSP 1 Score: 294.3 bits (752), Expect = 2.6e-76
Identity = 148/164 (90.24%), Postives = 154/164 (93.90%), Query Frame = 0


Query: 1   FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLLKDGDLQLQQQHYLQKTQQSS 60
           FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQL+KDGDLQLQ+ +YLQKTQQS 
Sbjct: 47  FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLMKDGDLQLQEHYYLQKTQQSP 106

Query: 61  TPIANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQRPG 120
           TP ANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQ P 
Sbjct: 107 TPTANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQPPA 166

Query: 121 SMFGVSAMNAQPLSQSQISGYKSTSIDTQYQSQQLPGSKVIINQ 165
           SMFGVS+MNAQP+SQSQI   K TSIDTQYQ QQLPGSKVIIN+
Sbjct: 167 SMFGVSSMNAQPMSQSQIPADKLTSIDTQYQGQQLPGSKVIINK 210

[Close]

BLAST of CsGy1G019420 vs. NCBI nr
Match: XP_016903012.1 (PREDICTED: transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis melo])

HSP 1 Score: 288.5 bits (737), Expect = 1.4e-74
Identity = 145/165 (87.88%), Postives = 152/165 (92.12%), Query Frame = 0


Query: 1   FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLLKDGDLQLQQQHYLQKTQQSS 60
           FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQL+KDGDLQLQ+ +YLQKTQQS 
Sbjct: 56  FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLMKDGDLQLQEHYYLQKTQQSP 115

Query: 61  TPIANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQRPG 120
           TP ANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQ P 
Sbjct: 116 TPTANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQPPA 175

Query: 121 SMFGVSAMNAQPLSQSQISGYKSTSIDTQYQSQQLPGSKVIINQL 166
           SMFGVS+MNAQP+SQSQI   K TSIDTQYQ QQLPGSK +  Q+
Sbjct: 176 SMFGVSSMNAQPMSQSQIPADKLTSIDTQYQGQQLPGSKKLKGQM 220

[Close]

BLAST of CsGy1G019420 vs. TAIR10
Match: AT4G32551.2 (LisH dimerisation motif;WD40/YVTN repeat-like-containing domain)

HSP 1 Score: 72.4 bits (176), Expect = 2.9e-13
Identity = 71/255 (27.84%), Postives = 93/255 (36.47%), Query Frame = 0


Query: 2   DAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLLKDGDLQL-------------- 61
           DAPGGFL EWWSVFWD+FIAR N +HSE A SYI++Q++K  + QL              
Sbjct: 46  DAPGGFLFEWWSVFWDIFIARTNEKHSEVAASYIETQMIKAREQQLXXXXXXXXXXXXXX 105

Query: 62  ------------------------------------------------------------ 121
                                                                       
Sbjct: 106 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 165

Query: 122 --------------QQQHYLQKTQQSSTPIANRLVLNNSLNI--QNPSVANEMAAKMYEE 163
                                     +   AN LV NNS  +  QNP   + +A+K YEE
Sbjct: 166 XXXXXXXXXXXXXXXXXXXXXXXXHLANGSANGLVGNNSEPVMRQNPGSGSSLASKAYEE 225

[Close]

BLAST of CsGy1G019420 vs. TAIR10
Match: AT2G32700.7 (LEUNIG_homolog)

HSP 1 Score: 68.9 bits (167), Expect = 3.2e-12
Identity = 54/171 (31.58%), Postives = 77/171 (45.03%), Query Frame = 0


Query: 2   DAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLLK-------DGDLQLQQQHYLQ 61
           DAPGGFL EWWSVFWD+FIAR N +HSEAA +YI++Q  K                    
Sbjct: 46  DAPGGFLFEWWSVFWDIFIARTNEKHSEAAAAYIEAQQGKAXXXXXXXXXXXXXXXXXXX 105

Query: 62  KTQQSSTPIANRLVLNNSLNIQNPSVANEMAAKMYEENFTLP---IQRDTLANVLPKKRF 121
           +   +   +   +    S  +   S A+ +AAKMYEE    P       +  ++  +   
Sbjct: 106 RRDPNHPSLGGPMNAIGSEGMIGQSNASALAAKMYEERMKQPNPMNSETSQPHLDARMAL 165

Query: 122 LKHVSQRPGSMF------GVSAMNAQPLSQSQISGYKSTSIDTQYQSQQLP 157
           LK  +   G +       GVSA   Q  S++Q      T ++     +QLP
Sbjct: 166 LKSATNHHGQIVQGNHQGGVSAALQQIQSRTQQPTEIKTEVNLGTSPRQLP 216

[Close]

BLAST of CsGy1G019420 vs. Swiss-Prot
Match: sp|Q9FUY2|LEUNG_ARATH (Transcriptional corepressor LEUNIG OS=Arabidopsis thaliana OX=3702 GN=LUG PE=1 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 5.3e-12
Identity = 71/255 (27.84%), Postives = 93/255 (36.47%), Query Frame = 0


Query: 2   DAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLLKDGDLQL-------------- 61
           DAPGGFL EWWSVFWD+FIAR N +HSE A SYI++Q++K  + QL              
Sbjct: 46  DAPGGFLFEWWSVFWDIFIARTNEKHSEVAASYIETQMIKAREQQLXXXXXXXXXXXXXX 105

Query: 62  ------------------------------------------------------------ 121
                                                                       
Sbjct: 106 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 165

Query: 122 --------------QQQHYLQKTQQSSTPIANRLVLNNSLNI--QNPSVANEMAAKMYEE 163
                                     +   AN LV NNS  +  QNP   + +A+K YEE
Sbjct: 166 XXXXXXXXXXXXXXXXXXXXXXXXHLANGSANGLVGNNSEPVMRQNPGSGSSLASKAYEE 225

[Close]

BLAST of CsGy1G019420 vs. Swiss-Prot
Match: sp|O48847|LUH_ARATH (Transcriptional corepressor LEUNIG_HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=LUH PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.8e-11
Identity = 54/171 (31.58%), Postives = 77/171 (45.03%), Query Frame = 0


Query: 2   DAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLLK-------DGDLQLQQQHYLQ 61
           DAPGGFL EWWSVFWD+FIAR N +HSEAA +YI++Q  K                    
Sbjct: 46  DAPGGFLFEWWSVFWDIFIARTNEKHSEAAAAYIEAQQGKAXXXXXXXXXXXXXXXXXXX 105

Query: 62  KTQQSSTPIANRLVLNNSLNIQNPSVANEMAAKMYEENFTLP---IQRDTLANVLPKKRF 121
           +   +   +   +    S  +   S A+ +AAKMYEE    P       +  ++  +   
Sbjct: 106 RRDPNHPSLGGPMNAIGSEGMIGQSNASALAAKMYEERMKQPNPMNSETSQPHLDARMAL 165

Query: 122 LKHVSQRPGSMF------GVSAMNAQPLSQSQISGYKSTSIDTQYQSQQLP 157
           LK  +   G +       GVSA   Q  S++Q      T ++     +QLP
Sbjct: 166 LKSATNHHGQIVQGNHQGGVSAALQQIQSRTQQPTEIKTEVNLGTSPRQLP 216

[Close]

BLAST of CsGy1G019420 vs. Swiss-Prot
Match: sp|O94619|ADN2_SCHPO (Adhesion defective protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=adn2 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-05
Identity = 31/67 (46.27%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 2   DAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIK--SQLLKDGDLQLQQ-QHYLQKTQQ 61
           D+ GGFL+EWW+VFWD++ AR   Q SE A +Y+   S L K   L LQ+ Q     T  
Sbjct: 133 DSAGGFLIEWWNVFWDIYNAR-RGQGSEPAKAYMSHISNLRKKSRLNLQEIQKNSLHTGN 192

Query: 62  SSTPIAN 66
           +S P AN
Sbjct: 193 TSHPYAN 198

[Close]

BLAST of CsGy1G019420 vs. TrEMBL
Match: tr|A0A0A0LTZ0|A0A0A0LTZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G403660 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 4.3e-83
Identity = 159/165 (96.36%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLLKDGDLQLQQQHYLQKTQQSS 60
           FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLLKDGDLQLQQQHYLQKTQQSS
Sbjct: 42  FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLLKDGDLQLQQQHYLQKTQQSS 101

Query: 61  TPIANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQRPG 120
           TPIANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQRPG
Sbjct: 102 TPIANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQRPG 161

Query: 121 SMFGVSAMNAQPLSQSQISGYKSTSIDTQYQSQQLPGSKVIINQL 166
           SMFGVSAMNAQPLSQSQISGYKSTSIDTQYQSQQLPGSK +  ++
Sbjct: 162 SMFGVSAMNAQPLSQSQISGYKSTSIDTQYQSQQLPGSKKLKGEM 206

[Close]

BLAST of CsGy1G019420 vs. TrEMBL
Match: tr|A0A1S4E4W4|A0A1S4E4W4_CUCME (transcriptional corepressor LEUNIG-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501528 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.7e-76
Identity = 148/164 (90.24%), Postives = 154/164 (93.90%), Query Frame = 0


Query: 1   FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLLKDGDLQLQQQHYLQKTQQSS 60
           FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQL+KDGDLQLQ+ +YLQKTQQS 
Sbjct: 56  FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLMKDGDLQLQEHYYLQKTQQSP 115

Query: 61  TPIANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQRPG 120
           TP ANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQ P 
Sbjct: 116 TPTANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQPPA 175

Query: 121 SMFGVSAMNAQPLSQSQISGYKSTSIDTQYQSQQLPGSKVIINQ 165
           SMFGVS+MNAQP+SQSQI   K TSIDTQYQ QQLPGSKVIIN+
Sbjct: 176 SMFGVSSMNAQPMSQSQIPADKLTSIDTQYQGQQLPGSKVIINK 219

[Close]

BLAST of CsGy1G019420 vs. TrEMBL
Match: tr|A0A1S4E458|A0A1S4E458_CUCME (transcriptional corepressor LEUNIG-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103501528 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.7e-76
Identity = 148/164 (90.24%), Postives = 154/164 (93.90%), Query Frame = 0


Query: 1   FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLLKDGDLQLQQQHYLQKTQQSS 60
           FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQL+KDGDLQLQ+ +YLQKTQQS 
Sbjct: 47  FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLMKDGDLQLQEHYYLQKTQQSP 106

Query: 61  TPIANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQRPG 120
           TP ANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQ P 
Sbjct: 107 TPTANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQPPA 166

Query: 121 SMFGVSAMNAQPLSQSQISGYKSTSIDTQYQSQQLPGSKVIINQ 165
           SMFGVS+MNAQP+SQSQI   K TSIDTQYQ QQLPGSKVIIN+
Sbjct: 167 SMFGVSSMNAQPMSQSQIPADKLTSIDTQYQGQQLPGSKVIINK 210

[Close]

BLAST of CsGy1G019420 vs. TrEMBL
Match: tr|A0A1S4E464|A0A1S4E464_CUCME (transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501528 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 9.5e-75
Identity = 145/165 (87.88%), Postives = 152/165 (92.12%), Query Frame = 0


Query: 1   FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLLKDGDLQLQQQHYLQKTQQSS 60
           FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQL+KDGDLQLQ+ +YLQKTQQS 
Sbjct: 56  FDAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLMKDGDLQLQEHYYLQKTQQSP 115

Query: 61  TPIANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQRPG 120
           TP ANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQ P 
Sbjct: 116 TPTANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQPPA 175

Query: 121 SMFGVSAMNAQPLSQSQISGYKSTSIDTQYQSQQLPGSKVIINQL 166
           SMFGVS+MNAQP+SQSQI   K TSIDTQYQ QQLPGSK +  Q+
Sbjct: 176 SMFGVSSMNAQPMSQSQIPADKLTSIDTQYQGQQLPGSKKLKGQM 220

[Close]

BLAST of CsGy1G019420 vs. TrEMBL
Match: tr|A0A2P5RI32|A0A2P5RI32_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD16596 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 6.0e-21
Identity = 72/161 (44.72%), Postives = 89/161 (55.28%), Query Frame = 0


Query: 2   DAPGGFLLEWWSVFWDLFIARINPQHSEAATSYIKSQLLKDGDLQLQQQHYLQKTQQSST 61
           DAPGGFL EWWSVFWD+FIAR N +HSE A SYI+ Q       Q QQ+         ST
Sbjct: 46  DAPGGFLFEWWSVFWDIFIARTNEKHSEVAASYIEPQ-------QPQQRRDGSHLLNGST 105

Query: 62  PIANRLVLNNSLNIQNPSVANEMAAKMYEENFTLPIQRDTLANVLPKKRFLKHVSQ---- 121
              N LV N+SL  Q    AN MA KMYEE   LP+QRD+L +   K+R+ ++V Q    
Sbjct: 106 ---NGLVGNDSLMRQPAGTANAMATKMYEERLKLPLQRDSLDDAAMKQRYGENVGQLLDP 165

Query: 122 RPGSMFGVSAMNAQPLSQSQISGYKSTSIDTQYQSQQLPGS 159
              S+   +A  +QP  Q         S   Q +SQQLPG+
Sbjct: 166 NHASILKPAAATSQPSGQVLHGTAGGMSPQVQARSQQLPGT 196

The following BLAST results are available for this feature:

BLAST of CsGy1G019420 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65390.1	6.4e-83	96.36	hypothetical protein Csa_1G403660 [Cucumis sativus]	[more]
XP_011656566.1	6.4e-83	96.36	PREDICTED: transcriptional corepressor LEUNIG-like [Cucumis sativus]	[more]
XP_016903010.1	2.6e-76	90.24	PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Cucumis melo]	[more]
XP_016903013.1	2.6e-76	90.24	PREDICTED: transcriptional corepressor LEUNIG-like isoform X3 [Cucumis melo]	[more]
XP_016903012.1	1.4e-74	87.88	PREDICTED: transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis m...	[more]

BLAST of CsGy1G019420 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G32551.2	2.9e-13	27.84	LisH dimerisation motif;WD40/YVTN repeat-like-containing domain	[more]
AT2G32700.7	3.2e-12	31.58	LEUNIG_homolog	[more]

BLAST of CsGy1G019420 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FUY2\|LEUNG_ARATH	5.3e-12	27.84	Transcriptional corepressor LEUNIG OS=Arabidopsis thaliana OX=3702 GN=LUG PE=1 S...	[more]
sp\|O48847\|LUH_ARATH	5.8e-11	31.58	Transcriptional corepressor LEUNIG_HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=LU...	[more]
sp\|O94619\|ADN2_SCHPO	1.3e-05	46.27	Adhesion defective protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of CsGy1G019420 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LTZ0\|A0A0A0LTZ0_CUCSA	4.3e-83	96.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G403660 PE=4 SV=1	[more]
tr\|A0A1S4E4W4\|A0A1S4E4W4_CUCME	1.7e-76	90.24	transcriptional corepressor LEUNIG-like isoform X1 OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|A0A1S4E458\|A0A1S4E458_CUCME	1.7e-76	90.24	transcriptional corepressor LEUNIG-like isoform X3 OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|A0A1S4E464\|A0A1S4E464_CUCME	9.5e-75	87.88	transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 OS=Cucumis melo OX=36...	[more]
tr\|A0A2P5RI32\|A0A2P5RI32_GOSBA	6.0e-21	44.72	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD16596 PE=4 SV...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G019420.1	CsGy1G019420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR44376	FAMILY NOT NAMED	coord: 2..58 coord: 64..160
None	No IPR available	PANTHER	PTHR44376:SF4	SUBFAMILY NOT NAMED	coord: 2..58 coord: 64..160

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G019420	Cucurbita maxima (Rimu)	cgybcmaB020
CsGy1G019420	Cucurbita maxima (Rimu)	cgybcmaB044
CsGy1G019420	Cucurbita maxima (Rimu)	cgybcmaB138
CsGy1G019420	Cucurbita moschata (Rifu)	cgybcmoB020
CsGy1G019420	Cucurbita moschata (Rifu)	cgybcmoB041
CsGy1G019420	Cucurbita pepo (Zucchini)	cgybcpeB045
CsGy1G019420	Cucurbita pepo (Zucchini)	cgybcpeB113
CsGy1G019420	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G019420	Bottle gourd (USVL1VR-Ls)	cgyblsiB059
CsGy1G019420	Melon (DHL92) v3.5.1	cgybmeB053
CsGy1G019420	Melon (DHL92) v3.6.1	cgybmedB048
CsGy1G019420	Melon (DHL92) v3.6.1	cgybmedB065
CsGy1G019420	Watermelon (Charleston Gray)	cgybwcgB067
CsGy1G019420	Watermelon (97103) v1	cgybwmB083
CsGy1G019420	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G019420	Silver-seed gourd	carcgybB0038
CsGy1G019420	Silver-seed gourd	carcgybB0134
CsGy1G019420	Silver-seed gourd	carcgybB0571
CsGy1G019420	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G019420	Cucumber (Chinese Long) v3	cgybcucB019
CsGy1G019420	Watermelon (97103) v2	cgybwmbB021
CsGy1G019420	Watermelon (97103) v2	cgybwmbB067
CsGy1G019420	Wax gourd	cgybwgoB004
CsGy1G019420	Wax gourd	cgybwgoB097