CsGy1G019180 (gene) Cucumber (Gy14) v2

NameCsGy1G019180
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionOuter envelope pore protein 16, chloroplastic
LocationChr1 : 17704677 .. 17704998 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCGCTGCTACTCGAGCGGCTGCTAAGGATGCTTATCATGTTGTTAGAAAAGGTTTTGTCTTTCTCGCCTTTTTCTGTGAAATTGGTTTCAATTTCTTGCTTTCTTTATTGAGTTTATGGCGTTGCTTTTGATTATGTAGGAACGATTTCTATTCGCAAATTTGAAAATATCGTTAGTATCTCTTGCTTCAAACTCAAGTTGTGGAGTATGCTAGCTTATGGCTTTTGAATGCTGAAATTTTCAATTTGAGAATGTTTATAATTAGGAACGAGACTCTTAATTAGTAGATTATAGTGACCTCTATTTTTCTATTTGTTGGGG

mRNA sequence

GTCGCTGCTACTCGAGCGGCTGCTAAGGATGCTTATCATGTTGTTAGAAAAGGAACGATTTCTATTCGCAAATTTGAAAATATCGTTAGTATCTCTTGCTTCAAACTCAAGTTGTGGAGTATGCTAGCTTATGGCTTTTGAATGCTGAAATTTTCAATTTGAGAATGTTTATAATTAGGAACGAGACTCTTAATTAGTAGATTATAGTGACCTCTATTTTTCTATTTGTTGGGG

Coding sequence (CDS)

GTCGCTGCTACTCGAGCGGCTGCTAAGGATGCTTATCATGTTGTTAGAAAAGGAACGATTTCTATTCGCAAATTTGAAAATATCGTTAGTATCTCTTGCTTCAAACTCAAGTTGTGGAGTATGCTAGCTTATGGCTTTTGA

Protein sequence

VAATRAAAKDAYHVVRKGTISIRKFENIVSISCFKLKLWSMLAYGF
BLAST of CsGy1G019180 vs. TrEMBL
Match: tr|A0A1S3C572|A0A1S3C572_CUCME (outer envelope pore protein 16, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497163 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 7.1e-04
Identity = 26/43 (60.47%), Postives = 30/43 (69.77%), Query Frame = 0

Query: 1  VAATRAAAKDAYHVVRKGTISIRKFENIVSISCFKLKLWSMLA 44
          VAATRAAA+DAYHVVRKGTIS   FEN +   C +   W  +A
Sbjct: 39 VAATRAAAEDAYHVVRKGTISTHNFENTLKKMCTEGAYWGAVA 81

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3C572|A0A1S3C572_CUCME7.1e-0460.47outer envelope pore protein 16, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1034... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G019180.1CsGy1G019180.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None